Kondo Yohei 近藤洋平

Researcher Number	00724444
Other IDs	https://orcid.org/0000-0002-2801-4522
Affiliation (Current)	2024: 名古屋大学, One Medicine生命-創薬共創プラットフォーム(医), 特任講師
Affiliation (based on the past Project Information) *help	2023: 大学共同利用機関法人自然科学研究機構(機構直轄研究施設), 生命創成探究センター, 助教 2019 – 2022: 大学共同利用機関法人自然科学研究機構(新分野創成センター、アストロバイオロジーセンター、生命創成探究, 生命創成探究センター, 助教 2014 – 2016: 京都大学, 情報学研究科, 特定助教
Review Section/Research Field	Principal Investigator Complex systems / Basic Section 45020:Evolutionary biology-related / Developmental biology Except Principal Investigator Biological Sciences
Keywords	Principal Investigator 細胞集団運動 / 組織力学 / データ同化 / MAPキナーゼ / 創傷治癒 / 遺伝子発現 / 進化生物学 / 進化実験 / 遺伝子発現制御 / 細胞サイズ … More / 分裂酵母 / 組織レオロジー / 発生生物学 / 機械学習 / 時系列解析 / 逆問題 … More Except Principal Investigator オルガネラ周期 / 微小管 / 分泌経路 / 油体 / トランスクリプトーム / イメージング / 油体周期 / ゼニゴケ / 細胞動態 / 人間拡張工学 / 数理解析 / 画像解析 / 周期性 / 植物発生 Less

Quantifying how variance and multi-modality of gene expression affect evolution ratePrincipal Investigator
- Principal Investigator
  
  Kondo Yohei
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 45020:Evolutionary biology-related
- Research Institution
  Center for Novel Science Initatives, National Institutes of Natural Sciences
Identifying singular cells based on quantification of unpredictability in spatio-temporal modelingPrincipal Investigator
- Principal Investigator
  
  近藤洋平
- Project Period (FY)
  2019 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Center for Novel Science Initatives, National Institutes of Natural Sciences
Intrinsic periodicity of cellular systems and its modulation as the driving force be
- Principal Investigator
  
  中島敬二
- Project Period (FY)
  2019 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Nara Institute of Science and Technology
ゼニゴケ油体をモデルとしたオルガネラ周期の証明と中心因子の同定
- Principal Investigator
  
  上田貴志
- Project Period (FY)
  2019 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  National Institute for Basic Biology
Estimating mechanical properties of moving cell sheetsPrincipal Investigator
- Principal Investigator
  
  Kondo Yohei
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Developmental biology
- Research Institution
  Kyoto University

All 2022 2021 2020 2019 2016 2015 Other

All Journal Article Presentation

[Journal Article] LIM Tracker: a software package for cell tracking and analysis with advanced interactivity2022
- Author(s)
  Aragaki Hideya、Ogoh Katsunori、Kondo Yohei、Aoki Kazuhiro
- Journal Title
  
  Scientific Reports
  
  Volume: 12 Issue: 1 Pages: 2702-2702
- DOI
  10.1038/s41598-022-06269-6
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-19H05675
[Journal Article] 深層学習の植物画像解析への応用2022
- Author(s)
  藤井春樹、田中隼人、池内桃子、南野尚紀、上田貴志、近藤洋平、堀田一弘
- Journal Title
  
  アグリバイオ
  
  Volume: 6 Pages: 38-43
- Data Source
  KAKENHI-PLANNED-19H05675
[Journal Article] A glycogen synthase kinase 3-like kinase MpGSK regulates cell differentiation in <i>Marchantia polymorpha</i>2022
- Author(s)
  Furuya Tomoyuki、Nishihama Ryuichi、Ishizaki Kimitsune、Kohchi Takayuki、Fukuda Hiroo、Kondo Yuki
- Journal Title
  
  Plant Biotechnology
  
  Volume: 39 Issue: 1 Pages: 65-72
- DOI
  10.5511/plantbiotechnology.21.1219a
- NAID
  130008161270
- ISSN
  1342-4580, 1347-6114
- Year and Date
  2022-03-25
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-17H06476, KAKENHI-PUBLICLY-20H05407, KAKENHI-PROJECT-21H02500, KAKENHI-PROJECT-20K15813, KAKENHI-PROJECT-20K15815, KAKENHI-PROJECT-22H00417, KAKENHI-PROJECT-17H07424, KAKENHI-ORGANIZER-19H05670, KAKENHI-PLANNED-19H05675
[Journal Article] Visualization and Manipulation of Intracellular Signaling2021
- Author(s)
  Goto Yuhei、Kondo Yohei、Aoki Kazuhiro
- Journal Title
  
  Adv Exp Med Biol.
  
  Volume: 1 Pages: 225-234
- DOI
  10.1007/978-981-15-8763-4_13
- ISBN
  9789811587627, 9789811587634
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-19H05798, KAKENHI-PROJECT-18H02444, KAKENHI-PLANNED-19H05675, KAKENHI-ORGANIZER-19H05794
[Journal Article] Hierarchical modeling of mechano-chemical dynamics of epithelial sheets across cells and tissue2021
- Author(s)
  Asakura Yoshifumi、Kondo Yohei、Aoki Kazuhiro、Naoki Honda
- Journal Title
  
  Scientific Reports
  
  Volume: 11 Issue: 1 Pages: 4069-4069
- DOI
  10.1038/s41598-021-83396-6
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-19H05675, KAKENHI-PUBLICLY-19H04776, KAKENHI-PUBLICLY-19H05438, KAKENHI-PLANNED-19H05798, KAKENHI-PROJECT-18H02444, KAKENHI-PROJECT-20J15811, KAKENHI-ORGANIZER-19H05670, KAKENHI-ORGANIZER-19H05794
[Journal Article] Wound-inducible ANAC071 and ANAC096 transcription factors promote cambial cell formation in incised Arabidopsis flowering stems.2021
- Author(s)
  Matsuoka K, Sato R, Matsukura Y, Kawajiri Y, Iino H, Nozawa N, Shibata K, Kondo Y, Satoh S, Asahina M.
- Journal Title
  
  Communications Biology
  
  Volume: 4 Issue: 1 Pages: 369-369
- DOI
  10.1038/s42003-021-01895-8
- NAID
  120007033558
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06728, KAKENHI-PROJECT-20K15815, KAKENHI-PLANNED-17H06476, KAKENHI-PUBLICLY-20H05407, KAKENHI-ORGANIZER-19H05670
[Journal Article] Optogenetic relaxation of actomyosin contractility uncovers mechanistic roles of cortical tension during cytokinesis2021
- Author(s)
  Yamamoto Kei、Miura Haruko、Ishida Motohiko、Mii Yusuke、Kinoshita Noriyuki、Takada Shinji、Ueno Naoto、Sawai Satoshi、Kondo Yohei、Aoki Kazuhiro
- Journal Title
  
  Nature Communications
  
  Volume: 12 Issue: 1 Pages: 1-13
- DOI
  10.1038/s41467-021-27458-3
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K16207, KAKENHI-PUBLICLY-19H04797, KAKENHI-PLANNED-19H05675, KAKENHI-PLANNED-19H05801, KAKENHI-PROJECT-18H02454, KAKENHI-PLANNED-19H05798, KAKENHI-PROJECT-19J20538
[Journal Article] Near-infrared imaging in fission yeast using a genetically encoded phycocyanobilin biosynthesis system2021
- Author(s)
  Sakai Keiichiro、Kondo Yohei、Fujioka Hiroyoshi、Kamiya Mako、Aoki Kazuhiro、Goto Yuhei
- Journal Title
  
  Journal of Cell Science
  
  Volume: 134 Issue: 24 Pages: 1-15
- DOI
  10.1242/jcs.259315
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19K16050, KAKENHI-PROJECT-19K16207, KAKENHI-PLANNED-19H05675, KAKENHI-PLANNED-19H05798
[Journal Article] An Artificial Conversion of Roots into Organs with Shoot Stem Characteristics by Inducing Two Transcription Factors2020
- Author(s)
  Hanano Shigeru、Tomatsu Hajime、Ohnishi Ai、Kobayashi Koichi、Kondo Yuki、Betsuyaku Shigeyuki、Takita Eiji、Ogata Yoshiyuki、Ozawa Keishi、Suda Kunihiro、Hosouchi Tsutomu、Nagase Takahiro、Suzuki Hideyuki、Sakurai Nozomu、Masumoto Hiroshi、Fukuda Hiroo、Shibata Daisuke
- Journal Title
  
  iScience
  
  Volume: 23 Issue: 7 Pages: 101332-101332
- DOI
  10.1016/j.isci.2020.101332
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K15815, KAKENHI-PLANNED-17H06476, KAKENHI-PUBLICLY-20H05407, KAKENHI-PROJECT-16H06377, KAKENHI-ORGANIZER-19H05670, KAKENHI-PROJECT-20H00473
[Journal Article] Improvement of Phycocyanobilin Synthesis for Genetically Encoded Phytochrome-Based Optogenetics2020
- Author(s)
  Uda Youichi、Miura Haruko、Goto Yuhei、Yamamoto Kei、Mii Yusuke、Kondo Yohei、Takada Shinji、Aoki Kazuhiro
- Journal Title
  
  ACS Chemical Biology
  
  Volume: 15 Issue: 11 Pages: 2896-2906
- DOI
  10.1021/acschembio.0c00477
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K16050, KAKENHI-PROJECT-18H02454, KAKENHI-PLANNED-19H05798, KAKENHI-PROJECT-18H02444, KAKENHI-PROJECT-19J20538, KAKENHI-ORGANIZER-19H05670, KAKENHI-PLANNED-19H05675, KAKENHI-ORGANIZER-19H05794
[Journal Article] Deep Imaging Analysis in VISUAL Reveals the Role of YABBY Genes in Vascular Stem Cell Fate Determination2020
- Author(s)
  Nurani Alif Meem、Ozawa Yasuko、Furuya Tomoyuki、Sakamoto Yuki、Ebine Kazuo、Matsunaga Sachihiro、Ueda Takashi、Fukuda Hiroo、Kondo Yuki
- Journal Title
  
  Plant and Cell Physiology
  
  Volume: 61 Issue: 2 Pages: 255-264
- DOI
  10.1093/pcp/pcaa002
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-ORGANIZER-15H05955, KAKENHI-PLANNED-15H05958, KAKENHI-PLANNED-15H05962, KAKENHI-PLANNED-17H06476, KAKENHI-PROJECT-18H02470, KAKENHI-PROJECT-17H05008, KAKENHI-PROJECT-16J03909, KAKENHI-PROJECT-18K14743, KAKENHI-PROJECT-19K21189, KAKENHI-PLANNED-19H05675, KAKENHI-PROJECT-16H06377, KAKENHI-PROJECT-19H03259
[Journal Article] GSK3 activity is a cell fate switch that balances the ratio of vascular cell type.2020
- Author(s)
  Tamaki Tamaki, Oya Satoyo, Naito Makiko, Ozawa Yasuko, Furuya Tomoyuki, Saito Masato, Sato Mayuko, Wakazaki Mayumi, Toyooka Kiminori, Fukuda Hiroo, Helariutta Yka, Kondo Yuki
- Journal Title
  
  Communications Biology
  
  Volume: 3 Issue: 1 Pages: 184-184
- DOI
  10.1038/s42003-020-0907-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-15H05958, KAKENHI-PROJECT-20K15813, KAKENHI-PROJECT-20K15815, KAKENHI-PLANNED-17H06476, KAKENHI-PUBLICLY-20H05407, KAKENHI-PROJECT-16H06377, KAKENHI-ORGANIZER-19H05670
[Journal Article] Rescaling of Spatio-Temporal Sensing in Eukaryotic Chemotaxis2016
- Author(s)
  Keita Kamino and Yohei Kondo
- Journal Title
  
  PLoS ONE
  
  Volume: － Issue: 2 Pages: e0171765-e0171765
- DOI
  10.1371/journal.pone.0171765
- NAID
  120006223595
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26840077
[Presentation] 細胞の周期動態とその変調が駆動する根の自在な成長2021
- Author(s)
  中島敬二, 射水勝利, 大城翔平, 米倉崇晃, 田中慧太, 近藤洋平, 宮島俊介, 郷達明
- Organizer
  日本植物学会第85回大会
- Data Source
  KAKENHI-ORGANIZER-19H05670
[Presentation] 表現学習による周期と変調の比較形態学2021
- Author(s)
  近藤洋平
- Organizer
  日本植物学会第85回大会
- Data Source
  KAKENHI-ORGANIZER-19H05670
[Presentation] Stochastic dynamics of expression of multidrug resistance transporter and growth at single-cell level2019
- Author(s)
  Yohei Kondo, Yuhei Goto, and Kazuhiro Aoki
- Organizer
  10 th International Fission Yeast Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K16207
[Presentation] Passive measurement of epithelial rigidity during collective cell migration2016
- Author(s)
  Yohei Kondo, Kazurhiro Aoki, and Shin Ishii
- Organizer
  International Conference on Systems Biology 2016
- Place of Presentation
  バルセロナ（スペイン）
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26840077
[Presentation] Inference for the mechanics of moving cell sheets2015
- Author(s)
  近藤洋平
- Organizer
  第５３回日本生物物理学会年会
- Place of Presentation
  金沢大学角間キャンパス（石川県金沢市）
- Year and Date
  2015-09-15
- Invited
- Data Source
  KAKENHI-PROJECT-26840077
[Presentation] Characterizing tissue rheology of moving cell sheets by a data assimilation approach
- Author(s)
  Yohei Kondo, Kazuhiro Aoki, and Shin Ishii
- Organizer
  第３７回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜（　横浜市）
- Year and Date
  2014-11-25 – 2014-11-27
- Data Source
  KAKENHI-PROJECT-26840077

1. 上田貴志 (10311333)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
2. 河内孝之 (40202056)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
3. 中島敬二 (80273853)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
4. 植田美那子 (20598726)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
5. 望月敦史 (10304726)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 稲見昌彦 (00345117)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 遠藤求 (80551499)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 深城英弘 (80324979)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 小田祥久 (30583257)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 塚谷裕一 (90260512)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. 金澤建彦 (60802783)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. AOKI Kazuhiro

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
13. 近藤侑貴

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
14. 後藤祐平

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
15. 朝比奈雅志

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
16. 福田裕穂

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
17. 松永幸大

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Kondo Yohei 近藤 洋平

Research Projects

Research Products

Co-Researchers

Quantifying how variance and multi-modality of gene expression affect evolution ratePrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Identifying singular cells based on quantification of unpredictability in spatio-temporal modelingPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Intrinsic periodicity of cellular systems and its modulation as the driving force be

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

ゼニゴケ油体をモデルとしたオルガネラ周期の証明と中心因子の同定

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Estimating mechanical properties of moving cell sheetsPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] LIM Tracker: a software package for cell tracking and analysis with advanced interactivity2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] 深層学習の植物画像解析への応用2022

Author(s)

Journal Title

Data Source

[Journal Article] A glycogen synthase kinase 3-like kinase MpGSK regulates cell differentiation in <i>Marchantia polymorpha</i>2022

Author(s)

Journal Title

DOI

NAID

ISSN

Year and Date

Language

Data Source

[Journal Article] Visualization and Manipulation of Intracellular Signaling2021

Author(s)

Journal Title

DOI

ISBN

Data Source

[Journal Article] Hierarchical modeling of mechano-chemical dynamics of epithelial sheets across cells and tissue2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Wound-inducible ANAC071 and ANAC096 transcription factors promote cambial cell formation in incised Arabidopsis flowering stems.2021

Author(s)

Journal Title

DOI

NAID

Data Source

[Journal Article] Optogenetic relaxation of actomyosin contractility uncovers mechanistic roles of cortical tension during cytokinesis2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Near-infrared imaging in fission yeast using a genetically encoded phycocyanobilin biosynthesis system2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] An Artificial Conversion of Roots into Organs with Shoot Stem Characteristics by Inducing Two Transcription Factors2020

Kondo Yohei 近藤洋平