YONEDA RYOMA 米田竜馬

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YONEDA Ryoma 米田竜馬

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Researcher Number	00734881
Other IDs
Affiliation (Current)	2025: 埼玉医科大学, 医学部, 講師
Affiliation (based on the past Project Information) *help	2021 – 2025: 埼玉医科大学, 医学部, 講師 2017 – 2020: 埼玉医科大学, 医学部, 助教
Review Section/Research Field	Principal Investigator Basic Section 48040:Medical biochemistry-related / Transformative Research Areas, Section (II) / Basic Section 50020:Tumor diagnostics and therapeutics-related / Cell biology Except Principal Investigator Transformative Research Areas, Section (II)
Keywords	Principal Investigator LLPS / m6A修飾 / lncRNA / cyclin D1 / m6A / TLS/FUS / RNA methylation / FUS/TLS / 高次クロマチン構造 / 液-液相分離 … More / 脂質ラフト / クロマチン高次構造 / メゾスケール構造体 / SX-STED / 相分離 / FUS / 核酸医薬 / ALS / TLS / pncRNA / CCND1 / pncRNA-D / RNAメチル化 … More Except Principal Investigator 軟X線 / 領域間連携 / 若手育成 / STED Less

生物と無生物をつなぐSTED技術開発の包括的な研究総括
- Principal Investigator
  
  黒澤俊介
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (B)
- Review Section
  
  Transformative Research Areas, Section (II)
- Research Institution
  Tohoku University
分子化合物から細胞内構造体に至るメゾリンク-メゾスケール構造体の形成機構解析-Principal Investigator
- Principal Investigator
  
  米田竜馬
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (B)
- Review Section
  
  Transformative Research Areas, Section (II)
- Research Institution
  Saitama Medical University
ALS病因タンパク質FUSのm6A修飾認識タンパク質としての機能解析Principal Investigator
- Principal Investigator
  
  米田竜馬
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 48040:Medical biochemistry-related
- Research Institution
  Saitama Medical University
Development of seed sequences for oligonucleotide therapeutics targeting neurodegenerative disordersPrincipal Investigator
- Principal Investigator
  
  YONEDA Ryoma
- Project Period (FY)
  2020 – 2023
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 50020:Tumor diagnostics and therapeutics-related
- Research Institution
  Saitama Medical University
Regulation of cyclin D1 gene expression by lncRNA transcribed from its promoter regionPrincipal Investigator
- Principal Investigator
  
  YONEDA Ryoma
- Project Period (FY)
  2017 – 2020
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Cell biology
- Research Institution
  Saitama Medical University

All 2024 2023 2022 2021 2020 2019 2018 2017

All Journal Article Presentation

[Journal Article] Identification of Essential Components of RNA Binding Domain of TLS/FUS2024
- Author(s)
  Ueda Naomi、Yoneda Ryoma、Kurokawa Riki
- Journal Title
  
  Biomedical Sciences
  
  Volume: 10 Issue: 2 Pages: 30-43
- DOI
  10.11648/j.bs.20241002.13
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K06392, KAKENHI-PROJECT-20K16452
[Journal Article] Identification of Long Noncoding RNA Recognized by RNA-Binding Protein TLS/FUS: Purification of RNAs by Affinity Chromatography of GST-TLS2022
- Author(s)
  Naomi Ueda, Ryoma Yoneda, Riki Kurokawa
- Journal Title
  
  Biomedical Sciences
  
  Volume: 8(4) Pages: 144-156
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K16452
[Journal Article] Non-coding RNA suppresses FUS aggregation caused by mechanistic shear stress on pipetting in a sequence-dependent manner2021
- Author(s)
  Hamad Nesreen、Yoneda Ryoma、So Masatomo、Kurokawa Riki、Nagata Takashi、Katahira Masato
- Journal Title
  
  Scientific Reports
  
  Volume: 11 Issue: 1 Pages: 9523-9523
- DOI
  10.1038/s41598-021-89075-w
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K18065, KAKENHI-PROJECT-20H03192, KAKENHI-PROJECT-18K06939, KAKENHI-PROJECT-20K06524, KAKENHI-PROJECT-20K16452
[Journal Article] m 6 A Modified Short RNA Fragments Inhibit Cytoplasmic TLS/FUS Aggregation Induced by Hyperosmotic Stress2021
- Author(s)
  Ryoma Yoneda, Naomi Ueda, Riki Kurokawa
- Journal Title
  
  International Journal of Molecular Sciences
  
  Volume: Vol.22 Issue: 20 Pages: 11014-11014
- DOI
  10.3390/ijms222011014
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K06939, KAKENHI-PROJECT-20K16452
[Journal Article] RNA sequence and length contribute to RNA-induced conformational change of TLS/FUS2020
- Author(s)
  Hamad Nesreen、Mashima Tsukasa、Yamaoki Yudai、Kondo Keiko、Yoneda Ryoma、Oyoshi Takanori、Kurokawa Riki、Nagata Takashi、Katahira Masato
- Journal Title
  
  Scientific Reports
  
  Volume: 10 Issue: 1 Pages: 2629-2629
- DOI
  10.1038/s41598-020-59496-0
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K18065, KAKENHI-PUBLICLY-18H04550, KAKENHI-PROJECT-16K07269, KAKENHI-PROJECT-17K05930, KAKENHI-PROJECT-18K14636, KAKENHI-PROJECT-19K16054, KAKENHI-PUBLICLY-17H05878, KAKENHI-PROJECT-17K14515, KAKENHI-PROJECT-17K07307, KAKENHI-PROJECT-18K19397
[Journal Article] Potential Inhibitor Against Phase Separation, 1, 6-hexanediol Specifically Binds to Beta Actin in Nuclear Extract of Human Cell Line2020
- Author(s)
  Naomi Ueda, Yuki Hirose, Ryoma Yoneda, Toshikazu Bando, Riki Kurokawa
- Journal Title
  
  Biomedical Sciences
  
  Volume: 6 Pages: 88-97
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K16452
[Journal Article] Long noncoding RNA pncRNA-D?reduces cyclin D1 gene expression and arrests cell cycle through RNA m6A modification2020
- Author(s)
  Yoneda Ryoma、Ueda Naomi、Uranishi Kousuke、Hirasaki Masataka、Kurokawa Riki
- Journal Title
  
  Journal of Biological Chemistry
  
  Volume: 295 Issue: 17 Pages: 5626-5639
- DOI
  10.1074/jbc.ra119.011556
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06939, KAKENHI-PROJECT-17K15604, KAKENHI-PROJECT-17K18065
[Journal Article] Arginine methylation of translocated in liposarcoma (TLS) inhibits its binding to long noncoding RNA, abrogating TLS-mediated repression of CBP/p300 activity2018
- Author(s)
  Cui Wei、Yoneda Ryoma、Ueda Naomi、Kurokawa Riki
- Journal Title
  
  Journal of Biological Chemistry
  
  Volume: 293 Issue: 28 Pages: 10937-10948
- DOI
  10.1074/jbc.ra117.000598
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K06939, KAKENHI-PROJECT-17K18065
[Presentation] m6A修飾認識タンパク質としてのTLS/FUS2023
- Author(s)
  米田竜馬、上田奈緒美、黒川理樹
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-23K06392
[Presentation] m6A修飾認識タンパク質としてのTLS/FUS2023
- Author(s)
  米田竜馬、上田奈緒美、黒川理樹
- Organizer
  第46回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-20K16452
[Presentation] TLS/FUSのm6A修飾readerとしての可能性2022
- Author(s)
  米田竜馬、上田奈緒美、黒川理樹
- Organizer
  第45回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-20K16452
[Presentation] The effect of m6A RNA on LLPS of TLS/FUS2021
- Author(s)
  米田竜馬、上田奈緒美、黒川理樹
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-20K16452
[Presentation] CCND1遺伝子発現におけるlncRNAのm6A修飾の役割2021
- Author(s)
  米田竜馬、上田奈緒美、浦西洸介、平崎正孝、黒川理樹
- Organizer
  第43回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-17K18065
[Presentation] CCND1遺伝子発現におけるlncRNAのm6A修飾の役割2021
- Author(s)
  米田竜馬、上田奈緒美、浦西洸介、平崎正孝、黒川理樹
- Organizer
  第43回日本分子生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-20K16452
[Presentation] RNA結合タンパク質TLS/FUSの液-液相分離、繊維化に薬剤が与える効果2019
- Author(s)
  米田　竜馬、上田　奈緒美、金木　清美、板東俊和、黒川　理樹
- Organizer
  第42回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-17K18065
[Presentation] CCND1プロモーター領域より転写されるlncRNAによる細胞周期への影響2018
- Author(s)
  米田竜馬、上田奈緒美、黒川理樹
- Organizer
  日本分子生物学会
- Data Source
  KAKENHI-PROJECT-17K18065
[Presentation] TLS and long noncoding RNA transcribed from the promoter of cyclin D1 repress its mRNA expression2017
- Author(s)
  Ryoma YONEDA, Wei Cui, Naomi Ueda, Riki Kurokawa
- Organizer
  第43回内藤コンファレンス
- Data Source
  KAKENHI-PROJECT-17K18065
[Presentation] The effect of m6A modification on lncRNA transcribed from Cyclin D1 promoter2017
- Author(s)
  Ryoma YONEDA, Wei CUI, Naomi UEDA, and Riki KUROKAWA
- Organizer
  2017年度生命科学系学会合同年次大会（ConBio2017）
- Data Source
  KAKENHI-PROJECT-17K18065

1. 黒澤俊介 (80613637)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
2. 田上周路 (80420503)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. 山本晃司 (50767150)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 若山俊隆 (90438862)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 荒木智之 (40438825)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 上田奈緒美 (60796093)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 黒川理樹

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results

YONEDA RYOMA 米田 竜馬

YONEDA Ryoma 米田 竜馬

Research Projects

Research Products

Co-Researchers

生物と無生物をつなぐSTED技術開発の包括的な研究総括

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

分子化合物から細胞内構造体に至るメゾリンク-メゾスケール構造体の形成機構解析-Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

ALS病因タンパク質FUSのm6A修飾認識タンパク質としての機能解析Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Development of seed sequences for oligonucleotide therapeutics targeting neurodegenerative disordersPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Regulation of cyclin D1 gene expression by lncRNA transcribed from its promoter regionPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] Identification of Essential Components of RNA Binding Domain of TLS/FUS2024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Identification of Long Noncoding RNA Recognized by RNA-Binding Protein TLS/FUS: Purification of RNAs by Affinity Chromatography of GST-TLS2022

Author(s)

Journal Title

Data Source

[Journal Article] Non-coding RNA suppresses FUS aggregation caused by mechanistic shear stress on pipetting in a sequence-dependent manner2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] m 6 A Modified Short RNA Fragments Inhibit Cytoplasmic TLS/FUS Aggregation Induced by Hyperosmotic Stress2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] RNA sequence and length contribute to RNA-induced conformational change of TLS/FUS2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Potential Inhibitor Against Phase Separation, 1, 6-hexanediol Specifically Binds to Beta Actin in Nuclear Extract of Human Cell Line2020

Author(s)

Journal Title

Data Source

[Journal Article] Long noncoding RNA pncRNA-D?reduces cyclin D1 gene expression and arrests cell cycle through RNA m6A modification2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Arginine methylation of translocated in liposarcoma (TLS) inhibits its binding to long noncoding RNA, abrogating TLS-mediated repression of CBP/p300 activity2018

Author(s)

Journal Title

DOI

Data Source

[Presentation] m6A修飾認識タンパク質としてのTLS/FUS2023

Author(s)

Organizer

Data Source

[Presentation] m6A修飾認識タンパク質としてのTLS/FUS2023

Author(s)

Organizer

YONEDA RYOMA 米田竜馬

YONEDA Ryoma 米田竜馬