• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Yamamoto Eiji  山本 詠士

ORCIDConnect your ORCID iD *help
Researcher Number 00779340
Affiliation (Current) 2025: 慶應義塾大学, 理工学部(矢上), 准教授
Affiliation (based on the past Project Information) *help 2021 – 2023: 慶應義塾大学, 理工学部(矢上), 講師
2018 – 2020: 慶應義塾大学, 理工学部(矢上), 助教
Review Section/Research Field
Principal Investigator
Basic Section 13040:Biophysics, chemical physics and soft matter physics-related / Basic Section 43040:Biophysics-related / Transformative Research Areas, Section (III)
Keywords
Principal Investigator
分子動力学シミュレーション / 分子シミュレーション / 細胞膜 / 分子動力学計算 / 膜結合タンパク質 / 天然変性タンパク質 / 非膜性構造体 / 拡散 / 動的不均一場 / ブラウン動力学法 … More / 反応拡散方程式 / メゾスケール / 生体膜 / 不均一場 / 脂質-タンパク相互作用 / 脂質ータンパク相互作用 / 脂質ータンパク質相互作用 / リポクオリティ / イノシトールリン脂質 / ホスホイノシタイド / プレクストリン相同ドメイン / 水分子 / アニオン / タンパク質立体構造予測 / 水透過 / アニオン透過 / 浸透圧 / 分子透過 / アクアポリン Less
  • Research Projects

    (5 results)
  • Research Products

    (24 results)
  • Co-Researchers

    (1 People)
  •  生体膜上における膜結合タンパク質のマルチドメイン動態の解明Principal Investigator

    • Principal Investigator
      山本 詠士
    • Project Period (FY)
      2022 – 2024
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43040:Biophysics-related
    • Research Institution
      Keio University
  •  非膜性構造体における蛋白質の機能性構造ドメインと天然変性領域の協同的役割Principal Investigator

    • Principal Investigator
      山本 詠士
    • Project Period (FY)
      2021 – 2022
    • Research Category
      Grant-in-Aid for Transformative Research Areas (A)
    • Review Section
      Transformative Research Areas, Section (III)
    • Research Institution
      Keio University
  •  Development of computational methods to investigate the clustering dynamics of membrane proteins in heterogeneous biological membranesPrincipal Investigator

    • Principal Investigator
      Yamamoto Eiji
    • Project Period (FY)
      2020 – 2021
    • Research Category
      Grant-in-Aid for Early-Career Scientists
    • Review Section
      Basic Section 13040:Biophysics, chemical physics and soft matter physics-related
    • Research Institution
      Keio University
  •  Anion permeation mechanism of aquaporin 6Principal Investigator

    • Principal Investigator
      Yamamoto Eiji
    • Project Period (FY)
      2018 – 2019
    • Research Category
      Grant-in-Aid for Early-Career Scientists
    • Review Section
      Basic Section 13040:Biophysics, chemical physics and soft matter physics-related
    • Research Institution
      Keio University
  •  Elucidation of the influence of lipoquality on lipid-protein interaction by molecular dynamics simulationsPrincipal Investigator

    • Principal Investigator
      山本 詠士
    • Project Period (FY)
      2018 – 2019
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Research Institution
      Keio University

All 2024 2023 2022 2021 2020 2019 2018

All Journal Article Presentation

  • [Journal Article] Heterogeneous biological membranes regulate protein partitioning via fluctuating diffusivity2023

    • Author(s)
      Sakamoto Ken、Akimoto Takuma、Muramatsu Mayu、Sansom Mark S P、Metzler Ralf、Yamamoto Eiji
    • Journal Title

      PNAS Nexus

      Volume: 2 Issue: 8 Pages: 1-12

    • DOI

      10.1093/pnasnexus/pgad258

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K03392, KAKENHI-PROJECT-22K06171
  • [Journal Article] Multiple lipid binding sites determine the affinity of PH domains for phosphoinositide-containing membranes2020

    • Author(s)
      Yamamoto Eiji、Domanski Jan、Naughton Fiona B.、Best Robert B.、Kalli Antreas C.、Stansfeld Phillip J.、Sansom Mark S. P.
    • Journal Title

      Science Advances

      Volume: 6 Issue: 8

    • DOI

      10.1126/sciadv.aay5736

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-18H04678
  • [Journal Article] 細胞膜での蛋白質―イノシトールリン脂質相互作用へのアシル基の関与2019

    • Author(s)
      佐々木雄彦, 山本詠士, 佐々木純子
    • Journal Title

      医学のあゆみ

      Volume: 269 Pages: 1068-1072

    • Data Source
      KAKENHI-PUBLICLY-18H04678
  • [Presentation] マルチスケール分子シミュレーションで迫る生体分子の不均一拡散現象2024

    • Author(s)
      山本詠士
    • Organizer
      スーパーコンピュータワークショップ2023「シミュレーション、インフォマティクス、AIによる生体分子科学の最前線」
    • Invited
    • Data Source
      KAKENHI-PROJECT-22K06171
  • [Presentation] Mesoscale modelling of biomolecular diffusion in heterogeneous biological membranes2023

    • Author(s)
      Ken Sakamoto, Takuma Akimoto, Ralf Metzler, Eiji Yamamoto
    • Organizer
      67th Biophysical Society Annual Meeting
    • Data Source
      KAKENHI-PROJECT-22K06171
  • [Presentation] Mesoscale simulation of protein diffusion and localization in heterogeneous biological membranes2023

    • Author(s)
      Eiji Yamamoto, Ken Sakamoto, Takuma Akimoto, Mayu Muramatsu, Mark S. P. Sansom, Ralf Metzler
    • Organizer
      The 6th International Conference on Molecular Simulation (ICMS2023)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22K06171
  • [Presentation] 秩序相/非秩序相に相分離した細胞膜において拡散するタンパク質のメゾスケール計算2023

    • Author(s)
      山本詠士
    • Organizer
      第37回分子シミュレーション討論会
    • Data Source
      KAKENHI-PROJECT-22K06171
  • [Presentation] Fluctuating diffusivity of intrinsically disordered proteins2023

    • Author(s)
      Eiji Yamamoto, Fuga Watanabe, Robert B Best, Takuma Akimoto, Kresten Lindorff-Larsen, Ralf Metzler
    • Organizer
      67th Biophysical Society Annual Meeting
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-21H05728
  • [Presentation] Multiscale simulation of molecular diffusion and interactions on heterogeneous biological membranes2023

    • Author(s)
      Eiji Yamamoto
    • Organizer
      The 9th International Discussion Meeting on Relaxations in Complex Systems (9IDMRCS)
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22K06171
  • [Presentation] Protein behavior depends on their conformation in viscoelastic droplet2023

    • Author(s)
      Fuga Watanabe, Eiji Yamamoto
    • Organizer
      67th Biophysical Society Annual Meeting
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-21H05728
  • [Presentation] Conformational fluctuations of proteins affect their instantaneous diffusivity2022

    • Author(s)
      Eiji Yamamoto
    • Organizer
      The 3rd Workshop on Stochasticity and Fluctuations in Small Systems
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-21H05728
  • [Presentation] Multifaceted view of protein diffusion2022

    • Author(s)
      Eiji Yamamoto
    • Organizer
      第60回生物物理学会年会
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-21H05728
  • [Presentation] 分子動力学シミュレーションによる生体分子挙動の解明2022

    • Author(s)
      山本詠士
    • Organizer
      第42回計算数理工学フォーラム
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-21H05728
  • [Presentation] メゾスケールシミュレーション手法による生体膜内の分子拡散の解析2022

    • Author(s)
      坂本健,秋元琢磨,村松眞由,Mark S.P.Sansom,Ralf Metzler,山本詠士
    • Organizer
      日本機械学会 関東支部 第28期総会・講演会
    • Data Source
      KAKENHI-PROJECT-20K14432
  • [Presentation] 分子動力学シミュレーションによる生体分子挙動の解明2022

    • Author(s)
      山本詠士
    • Organizer
      第42回計算数理工学フォーラム
    • Invited
    • Data Source
      KAKENHI-PROJECT-22K06171
  • [Presentation] 不均一な場における粒子の拡散性のゆらぎ2021

    • Author(s)
      坂本健,秋元琢磨,村松眞由,Mark S.P.Sansom,Ralf Metzler,山本詠士
    • Organizer
      第35回分子シミュレーション討論会
    • Data Source
      KAKENHI-PROJECT-20K14432
  • [Presentation] 分子シミュレーションによるアクアポリンの分子透過メカニズムの解明2019

    • Author(s)
      山本詠士
    • Organizer
      第13回In vivo実験医学シンポジウム ~アクアポリン研究の最前線~
    • Invited
    • Data Source
      KAKENHI-PROJECT-18K13517
  • [Presentation] Molecular Dynamics of Pleckstrin Homology Domains on a Biological Membrane2019

    • Author(s)
      Eiji Yamamoto
    • Organizer
      The 5th International Conference on Molecular Simulation
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-18H04678
  • [Presentation] 生体膜における水分子の輸送現象をコンピューターシミュレーションによって可視化する2019

    • Author(s)
      山本詠士
    • Organizer
      機能性食品研究会講演会 第1回研究会「Water Biology 生命にとって大切な水」
    • Invited
    • Data Source
      KAKENHI-PROJECT-18K13517
  • [Presentation] Molecular Dynamics Simulation Study of the Molecular Mechanism of Anion Permeation through Aquaporin-62019

    • Author(s)
      Eiji Yamamoto, Keehyoung Joo, Jooyoung Lee, Masato Yasui, Mark S.P. Sansom
    • Organizer
      The 2nd Pacific Rim Thermal Engineering Conference
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K13517
  • [Presentation] リポクオリティがプレクストリン相同ドメインと生体膜の相互作用に与える影響2018

    • Author(s)
      山本詠士,佐々木純子,Mark S.P. Sansom,佐々木雄彦
    • Organizer
      第60回日本脂質生化学会
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-18H04678
  • [Presentation] 分子動力学シミュレーションを用いたアクアポリンにおける水透過性の解明2018

    • Author(s)
      塚田拓大, 佐藤洋平, 菱田公一, 安井正人, 山本詠士
    • Organizer
      第32回分子シミュレーション討論会
    • Data Source
      KAKENHI-PROJECT-18K13517
  • [Presentation] 分子動力学シミュレーションを用いた生体膜近傍における水分子ダイナミクスの解明2018

    • Author(s)
      山本詠士
    • Organizer
      MIMS/CMMA Mini Workshop「中枢神経系における水の膜輸送と流れの数理生理学」
    • Invited
    • Data Source
      KAKENHI-PROJECT-18K13517
  • [Presentation] 脂質アシル基の違いがPHドメインの生体膜への結合性に与える影響2018

    • Author(s)
      山本詠士,佐々木純子,佐々木雄彦
    • Organizer
      第32回分子シミュレーション討論会
    • Data Source
      KAKENHI-PUBLICLY-18H04678
  • 1.  AKIMOTO Takuma
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

URL: 

Are you sure that you want to link your ORCID iD to your KAKEN Researcher profile?
* This action can be performed only by the researcher himself/herself who is listed on the KAKEN Researcher’s page. Are you sure that this KAKEN Researcher’s page is your page?

この研究者とORCID iDの連携を行いますか?
※ この処理は、研究者本人だけが実行できます。

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi