Miki Takeshi 三木健

Researcher Number	00815508
Other IDs
Affiliation (Current)	2025: 龍谷大学, 先端理工学部, 教授
Affiliation (based on the past Project Information) *help	2020 – 2024: 龍谷大学, 先端理工学部, 教授 2019: 龍谷大学, 理工学部, 教授
Review Section/Research Field	Principal Investigator Medium-sized Section 64:Environmental conservation measure and related fields / Basic Section 45040:Ecology and environment-related Except Principal Investigator Basic Section 63010:Environmental dynamic analysis-related / Basic Section 40010:Forest science-related / Broad Section K / Basic Section 45040:Ecology and environment-related / Medium-sized Section 40:Forestry and forest products science, applied aquatic science, and related fields
Keywords	Principal Investigator モデリング / データ解析 / 早期警戒シグナル / 基本再生産数 / 菌類 / 水域生態系 / 非ランダム分布 / 個体間差異 / 感染症 / 数理モデリング … More / スーパースプレッダー / 生態系感染症 / 感染パラメータ / ツボカビ感染症 / 数理モデル / 理論疫学 / 生態系内感染症 / ツボカビ … More Except Principal Investigator 細菌 / 積雪 / 微生物 / 氷河 / DNA / 感染症 / 温暖化 / 雪氷藻類 / ツボカビ / 機能 / 多様性 / 広域パターン / 土地利用変化 / 空間スケール依存性 / 生態系機能 / 生物多様性 / 土壌微生物群集 / 気候変動 / 遺伝子解析 / ウィルス / 物質循環 / 海洋 / 生物炭素ポンプ / 粒子動態 / 微生物群集 / 海洋炭素循環 / 凝集体 / 湖沼 / 原生生物 / CL500-11 / 湖沼深水層 / 溶存有機物 / キネトプラスチド鞭毛虫 / 準易分解性溶存有機物 / 溶存態有機物 / CL500-11細菌 / 微生物ループ / 深水層 / 琵琶湖 / 遺伝子発現 / 代謝産物 / 半連続培養 / 増殖速度 / ブルーム / 連続培養 / ssRNA / ssDNA / ゲノム / ウイルス / 珪藻 Less

生態系レジームシフト検知のための微視的特徴づけに基づく早期診断法の構築Principal Investigator
- Principal Investigator
  
  三木健
- Project Period (FY)
  2023 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 64:Environmental conservation measure and related fields
- Research Institution
  Ryukoku University
氷河・積雪生態系における雪氷藻類へのツボカビ感染症の動態解明
- Principal Investigator
  
  鏡味麻衣子
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 63010:Environmental dynamic analysis-related
- Research Institution
  Yokohama National University
Evaluation of large-scale patterns and spatial dependence of forest soil microbial community function and its response environmental changes
- Principal Investigator
  
  Nakamura Masahiro
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 40010:Forest science-related
- Research Institution
  Hokkaido University
Maintenance of diatom bloom by viruses
- Principal Investigator
  
  Tomaru Yuji
- Project Period (FY)
  2019 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 40:Forestry and forest products science, applied aquatic science, and related fields
- Research Institution
  Fisheries Research and Education Agency
Microbial loop, dominant food chain in lake hypolimnion
- Principal Investigator
  
  Nakano Shin-ichi
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 45040:Ecology and environment-related
- Research Institution
  Kyoto University
Impacts of inter-individual heterogeneity of epidemic parameters on disease spread and ecosystemsPrincipal Investigator
- Principal Investigator
  
  Miki Takeshi
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 45040:Ecology and environment-related
- Research Institution
  Ryukoku University
Aggregate-biosphere: Unveiling hidden regulatory processes in the oceanic carbon cycle
- Principal Investigator
  
  永田俊
- Project Period (FY)
  2019 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Review Section
  
  Broad Section K
- Research Institution
  The University of Tokyo

All 2023 2022 2021 2020 2019

All Journal Article Presentation

[Journal Article] Microbial community composition and function in an urban waterway with combined sewer overflows before and after implementation of a stormwater storage pipe2023
- Author(s)
  Matsui Kazuaki、Miki Takeshi
- Journal Title
  
  PeerJ
  
  Volume: 11 Pages: e14684-e14684
- DOI
  10.7717/peerj.14684
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20H04348, KAKENHI-PROJECT-21H02226
[Journal Article] Preface: “Idea Paper” for sharing diverse research ideas2022
- Author(s)
  Miki Takeshi、Nakamura Masahiro、Kurokawa Hiroko、Matsui Kazuaki
- Journal Title
  
  Ecological Research
  
  Volume: 37 Issue: 4 Pages: 450-454
- DOI
  10.1111/1440-1703.12338
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19H05667
[Journal Article] New index of functional specificity to predict the redundancy of ecosystem functions in microbial communities2022
- Author(s)
  Cheng Wan-Hsuan、Hsieh Chih-hao、Chang Chun-Wei、Shiah Fuh-Kwo、Miki Takeshi
- Journal Title
  
  FEMS Microbiology Ecology
  
  Volume: 98 Issue: 6 Pages: 1-9
- DOI
  10.1093/femsec/fiac058
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21H02226, KAKENHI-PROJECT-19H05667
[Journal Article] Growth Rate-dependent Cell Death of Diatoms due to Viral Infection and Their Subsequent Coexistence in a Semi-continuous Culture System2021
- Author(s)
  Tomaru Y, Yamaguchi H, Miki T
- Journal Title
  
  Microbes and Environments
  
  Volume: 36 Issue: 1 Pages: n/a
- DOI
  10.1264/jsme2.ME20116
- NAID
  130007964998
- ISSN
  1342-6311, 1347-4405
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-INTERNATIONAL-16K21723, KAKENHI-PLANNED-16H06437, KAKENHI-PROJECT-19H00956
[Journal Article] Non-random patterns of chytrid infections on phytoplankton host cells: mathematical and chemical ecology approaches.2021
- Author(s)
  Kinuyo Yoneya, Takeshi Miki, Silke Van den Wyngaert, Hans-Peter Grossart, Maiko Kagami
- Journal Title
  
  Aquatic Microbial Ecology
  
  Volume: - Pages: 1-15
- DOI
  10.3354/ame01966
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H03309, KAKENHI-PROJECT-20K21840
[Presentation] 局所密度依存的多重寄生を引き起こす寄生者についての個体群動態モデル2023
- Author(s)
  三木健, 松井一彰, 鏡味麻衣子
- Organizer
  第７０回日本生態学会大会
- Data Source
  KAKENHI-PROJECT-19H05667
[Presentation] 森林土壌微生物群集の地域スケールでの多機能性と環境応答性2023
- Author(s)
  中村誠宏、日浦勉、柴田英昭、菅原悠斗、舘野隆之輔、三木健
- Organizer
  第70回日本生態学会
- Data Source
  KAKENHI-PROJECT-21H02226
[Presentation] 細菌多様性の時空間分布と物質循環のリンクの解明に対して，群集生態学理論は役に立つのか立たないのか？2023
- Author(s)
  三木健
- Organizer
  2023年度日本海洋学会秋季大会
- Invited
- Data Source
  KAKENHI-PROJECT-21H02226
[Presentation] New index of functional specificity to predict the redundancy of ecosystem functions in microbial communities.2023
- Author(s)
  Wan-Hsuan CHENG, Chih-hao HSIEH, Chun-Wei CHANG, Fuh-Kwo SHIAH, Takeshi MIKI
- Organizer
  日本生態学会第71回全国大会
- Data Source
  KAKENHI-PROJECT-21H02226
[Presentation] 局所密度依存的多重寄生を引き起こす寄生者についての個体群動態モデル2022
- Author(s)
  三木健, 松井一彰, 鏡味麻衣子
- Organizer
  第70回日本生態学会大会
- Data Source
  KAKENHI-PROJECT-23K24985
[Presentation] Mathematical model for aggregated multiple infections of fungal parasites on phytoplankton host cells2022
- Author(s)
  Takeshi MIKI, Kinuyo YONEYA, Kazuaki MATSUI, Maiko KAGAMI
- Organizer
  日本生態学会第69回全国大会
- Data Source
  KAKENHI-PROJECT-19H05667
[Presentation] 性質の異なる有機炭素に対する微生物群集による分解応答ダイナミクス：バイオログ培養実験と微生物群集モデル2022
- Author(s)
  三木健，徳島生大
- Organizer
  第８６回日本陸水学会
- Data Source
  KAKENHI-PROJECT-19H05667
[Presentation] Mathematical model for aggregated multiple infections for fungal parasites on phytoplankton host cells.2022
- Author(s)
  Takeshi MIKI, Kinuyo YONEYA, Kazuaki MATSUI, Maiko KAGAMI
- Organizer
  日本生態学会第69回全国大会
- Data Source
  KAKENHI-PROJECT-19H03309
[Presentation] Macroscale vertical power-law distribution of bacteria in dark oceans can emerge from microscale bacteria-particle interactions2021
- Author(s)
  Miki, T., Po-Ju Ke
- Organizer
  第68回日本生態学会大会
- Data Source
  KAKENHI-PROJECT-19H05667
[Presentation] Macroscale vertical power-law distribution of bacteria in dark oceans can emerge from microscale bacteria-particle interactions2021
- Author(s)
  Takeshi MIKI, Po-Ju KE
- Organizer
  日本生態学会第68回全国大会
- Data Source
  KAKENHI-PROJECT-19H03302
[Presentation] Macroscale vertical power-law distribution of bacteria in dark oceans can emerge from microscale bacteria-particle interactions.2021
- Author(s)
  Takeshi MIKI, Po-Ju KE
- Organizer
  日本生態学会第68回全国大会
- Data Source
  KAKENHI-PROJECT-19H03309
[Presentation] Observation and modeling on individual heterogeneity in phytoplankton-fungal interactions2021
- Author(s)
  Takeshi Miki
- Organizer
  Toward an integration of fluids, ecology, and evolution in Biofluids
- Invited
- Data Source
  KAKENHI-PROJECT-19H03309
[Presentation] Empirical Dynamic Modeling (EDM)入門2021
- Author(s)
  三木健
- Organizer
  日本生態学会関東地区会シンポジウム（Unraveling the complexity of microbial interactions: Toward predictive understanding of community dynamics and functions）
- Invited
- Data Source
  KAKENHI-PROJECT-19H03309
[Presentation] 水域生態系における感染症拡大要因“スーパー・スプレッダー”特定に向けた微生物感染パラメータの定量化2020
- Author(s)
  三木健・関淳一朗
- Organizer
  第31回龍谷大学新春技術講演会
- Data Source
  KAKENHI-PROJECT-19H03309
[Presentation] 水域生態系における炭素蓄積の謎：細菌の群集集合と炭素循環のフィードバック2020
- Author(s)
  Miki, T. Silke Van den Wyngaert, Olivier Vanholsbeeck, Luca Zoccarato, Hans-Peter Grossart
- Organizer
  第１６回生物数学とその応用
- Invited
- Data Source
  KAKENHI-PROJECT-19H05667
[Presentation] Major modelling approaches that are useful to environmental microbiology: their applicability and limitations2020
- Author(s)
  Takeshi Miki
- Organizer
  チリ微生物学会シンポジウム (Congreso SoMiCh 2020)
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H03302
[Presentation] Major modelling approaches that are useful to environmental microbiology: their applicability and limitations.2020
- Author(s)
  Takeshi Miki
- Organizer
  チリ微生物学会シンポジウム (Congreso SoMiCh 2020)
- Invited
- Data Source
  KAKENHI-PROJECT-19H03309
[Presentation] Ecological models for quantifying the impacts of algal-fungal interactions on aquatic ecosystems2020
- Author(s)
  Takeshi Miki, Maiko Kagami
- Organizer
  日本生態学会第67回全国大会 (2020年3月、名古屋)
- Data Source
  KAKENHI-PROJECT-19H03309
[Presentation] Major modeling approaches that are useful to environmental microbiology: their applicability and limitations2020
- Author(s)
  Miki, T.
- Organizer
  Congress of the Society of Microbiology of Chile (Congreso SoMiCh 2020)
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H05667
[Presentation] 水域生態系における炭素蓄積の謎：細菌の群集集合と炭素循環のフィードバック.2020
- Author(s)
  Miki, T. Silke Van den Wyngaert, Olivier Vanholsbeeck, Luca Zoccarato, Hans-Peter Grossart
- Organizer
  第１６回生物数学とその応用
- Invited
- Data Source
  KAKENHI-PROJECT-19H05667
[Presentation] Ecosystem-level stabilizing effects of biodiversity via nutrient diversity feedbacks in multitrophic systems.2019
- Author(s)
  Chang CW, Hsieh,CC-H, Miki, T.
- Organizer
  Symposium of Aquatic Microbial Ecology (SAME) 16
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H05667
[Presentation] Feedback between bacterial community assembly and refractory carbon accumulation in aquatic ecosystems.2019
- Author(s)
  Miki, T., Silke Van den Wyngaert, Olivier Vanholsbeeck, Luca Zoccarato, Hans-Peter Grossart
- Organizer
  Symposium of Aquatic Microbial Ecology (SAME) 16
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H05667

1. 鏡味麻衣子 (20449250)

# of Collaborated Projects: 4 results

# of Collaborated Products: 6 results
2. Tomaru Yuji (10416042)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. Nakano Shin-ichi (50270723)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. Nakamura Masahiro (80545624)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
5. 山口晴生 (10432816)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 本郷悠貴 (20737316)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 羽野健志 (30621057)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 山口保彦 (50726221)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 早川和秀 (80291178)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 松井一彰 (40435532)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
11. 永田俊 (40183892)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 横川太一 (00402751)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 本多牧生 (20359160)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. 福田秀樹 (30451892)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. 小川浩史 (50260518)

# of Collaborated Projects: 1 results

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16. 緒方博之 (70291432)

# of Collaborated Projects: 1 results

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17. 原田尚美 (70344281)

# of Collaborated Projects: 1 results

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18. 金子修治 (20426480)

# of Collaborated Projects: 1 results

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19. 久米朋宣 (30816393)

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20. 米谷衣代 (50618593)

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21. 片山歩美 (70706845)

# of Collaborated Projects: 1 results

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22. 城塚可奈子 (10737563)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
23. 舘野隆之輔 (60390712)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
24. 日浦勉 (70250496)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
25. 柴田英昭 (70281798)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
26. 竹内望 (30353452)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
27. 植竹淳 (40455473)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
28. 村上正志 (50312400)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
29. 瀬川高弘 (90425835)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

Miki Takeshi 三木 健

Research Projects

Research Products

Co-Researchers

生態系レジームシフト検知のための微視的特徴づけに基づく早期診断法の構築Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

氷河・積雪生態系における雪氷藻類へのツボカビ感染症の動態解明

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Evaluation of large-scale patterns and spatial dependence of forest soil microbial community function and its response environmental changes

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Maintenance of diatom bloom by viruses

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Microbial loop, dominant food chain in lake hypolimnion

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Impacts of inter-individual heterogeneity of epidemic parameters on disease spread and ecosystemsPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Aggregate-biosphere: Unveiling hidden regulatory processes in the oceanic carbon cycle

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Microbial community composition and function in an urban waterway with combined sewer overflows before and after implementation of a stormwater storage pipe2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Preface: “Idea Paper” for sharing diverse research ideas2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] New index of functional specificity to predict the redundancy of ecosystem functions in microbial communities2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Growth Rate-dependent Cell Death of Diatoms due to Viral Infection and Their Subsequent Coexistence in a Semi-continuous Culture System2021

Author(s)

Journal Title

DOI

NAID

ISSN

Language

Data Source

[Journal Article] Non-random patterns of chytrid infections on phytoplankton host cells: mathematical and chemical ecology approaches.2021

Author(s)

Journal Title

DOI

Data Source

[Presentation] 局所密度依存的多重寄生を引き起こす寄生者についての個体群動態モデル2023

Author(s)

Organizer

Data Source

[Presentation] 森林土壌微生物群集の地域スケールでの多機能性と環境応答性2023

Author(s)

Miki Takeshi 三木健