Irie Naoki 入江直樹

… Alternative Names

Researcher Number	10536121
Other IDs	https://orcid.org/0000-0002-6720-381X
Affiliation (Current)	2019: 東京大学, 大学院理学系研究科(理学部), 准教授
Affiliation (based on the past Project Information) *help	2016 – 2019: 東京大学, 大学院理学系研究科(理学部), 准教授 2013 – 2015: 東京大学, 理学(系)研究科(研究院), 准教授 2013: 東京大学, 大学院理学系研究科(理学部), 准教授 2009 – 2012: The Institute of Physical and Chemical Research, 形態進化研究グループ, 研究員
Review Section/Research Field	Principal Investigator Pathology, Infection/Immunology, and related fields / 基礎ゲノム科学 / Evolutionary biology / Developmental biology / Biological Sciences Except Principal Investigator Biological Sciences
Keywords	Principal Investigator 進化発生学 / バイオインフォマティクス / 進化 / EvoDevo / 発生 / 進化可能性 / ゲノム / 反復説 / 母児間免疫病 / エピジェネティクス … More Except Principal Investigator 進化 / 理論構築 / ゲノム / 揺らぎ応答理論 / カメ / 進化発生学 / 表現型進化 / 発生 / 脊椎動物 / 発生学 / ゲノム科学 / 実験進化学 / バイオインフォマティクス / 進化生物学 Less

Evolutionary theory for constrained and directional diversitiesOngoing
- Principal Investigator
  
  倉谷滋
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Institute of Physical and Chemical Research
脊索動物胚発生の分子発生システムゆらぎ測定と進化的保存性Principal InvestigatorOngoing
- Principal Investigator
  
  入江直樹
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The University of Tokyo
Testing possible contribution of maternal microchimeric cells to biliary atresiaPrincipal InvestigatorOngoing
- Principal Investigator
  
  入江直樹
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Challenging Research (Exploratory)
- Research Field
  
  Pathology, Infection/Immunology, and related fields
- Research Institution
  The University of Tokyo
In search for a general tendency of chordate embryonic evolution by analyzing genetic expression patterns during developmentPrincipal Investigator
- Principal Investigator
  
  Irie Naoki
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Young Scientists (A)
- Research Field
  
  Evolutionary biology
- Research Institution
  The University of Tokyo
Study toward evolutionary formulation of vertebrate embryogenesisPrincipal Investigator
- Principal Investigator
  
  IRIE Naoki
- Project Period (FY)
  2012 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Developmental biology
- Research Institution
  The University of Tokyo
  The Institute of Physical and Chemical Research
Changes in developmental program in the acquisition of novel morphological patterns of the turtle shell
- Principal Investigator
  
  KURATANI Shigeru
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  The Institute of Physical and Chemical Research
Identification of vertebrate phylotypic stage by transcriptome analysisPrincipal Investigator
- Principal Investigator
  
  IRIE Naoki
- Project Period (FY)
  2009 – 2010
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  The Institute of Physical and Chemical Research

All 2018 2017 2016 2015 2014 2013 2012 2011 2010 2009 Other

All Journal Article Presentation Book

[Book] 胎児期に刻まれた進化の痕跡2015
- Author(s)
  入江直樹
- Total Pages
  152
- Publisher
  慶應大学出版会
- Data Source
  KAKENHI-PROJECT-15H05603
[Book] 細胞工学　2014年１月号　特集号2014
- Author(s)
  入江　直樹
- Total Pages
  5
- Publisher
  秀潤社
- Data Source
  KAKENHI-PLANNED-22128003
[Book] 胚発生のロバストネスは進化にバイアスをかけているか？2014
- Author(s)
  入江直樹
- Total Pages
  5
- Publisher
  細胞工学
- Data Source
  KAKENHI-PROJECT-24570243
[Book] New Principles in Developmental Processes2014
- Author(s)
  Irie, N., Nagashima, H., Kuratani, S
- Total Pages
  12
- Publisher
  Springer Japan
- Data Source
  KAKENHI-PLANNED-22128003
[Book] 物理科学月刊誌　パリティ 2013年１月号特集：物理科学、この１年「進化と発生の関係性定式化にみる生物のやわらかさ」2013
- Author(s)
  入江直樹
- Total Pages
  3
- Publisher
  丸善出版
- Data Source
  KAKENHI-PROJECT-24570243
[Book] 脊椎動物ファイロタイプとボディプラン進化2013
- Author(s)
  入江直樹
- Total Pages
  5
- Publisher
  遺伝
- Data Source
  KAKENHI-PROJECT-24570243
[Book] 遺伝　2013年３月号「脊椎動物ファイロタイプとボディプラン進化」2013
- Author(s)
  入江直樹、倉谷滋
- Total Pages
  6
- Publisher
  株式会社エヌ・ティー・エス
- Data Source
  KAKENHI-PROJECT-24570243
[Book] 実験医学2011
- Author(s)
  入江直樹、連利博
- Publisher
  母児間マイクロキメリズムが問いかける自己と他者免疫学・再生医学・臨床医学への展開,Update Review <羊土社>29(6)
- Data Source
  KAKENHI-PROJECT-21710195
[Book] 母児間マイクロキメリズムが問いかける自己と他者(実験医学)2011
- Author(s)
  入江直樹
- Total Pages
  6
- Publisher
  羊土社実験医学
- Data Source
  KAKENHI-PROJECT-21710195
[Book] 実験医学2011
- Author(s)
  八谷剛史、入江直樹、荒川和晴
- Publisher
  Close Up実験法<羊土社>次世代シークエンサー活用術
- Data Source
  KAKENHI-PROJECT-21710195
[Journal Article] Embryonic lethality is not sufficient to explain hourglass-like conservation of vertebrate embryos2018
- Author(s)
  Yui Uchida*, Masahiro Uesaka, Takayoshi Yamamoto, Hiroyuki Takeda and Naoki Irie*
- Journal Title
  
  EvoDevo
  
  Volume: 9:7 Pages: 1-11
- DOI
  10.1186/s13227-018-0095-0
- Open Access / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-15H05603, KAKENHI-PROJECT-15J06414, KAKENHI-PROJECT-17J06225
[Journal Article] Weighted gene co-expression network analysis reveals potential genes involved in early metamorphosis process in sea cucumber Apostichopus japonicus2018
- Author(s)
  Yongxin Li, Mani Kikuchi, Xueyan Li, Qionghua Gao, Zijun Xiong, Yandong Ren, Ruoping Zhao, Bingyu Mao, Mariko Kondo, Naoki Irie, Wen Wang*
- Journal Title
  
  Biochemical and Biophysical Research Communications
  
  Volume: 495:1 Pages: 1395-1402
- DOI
  10.1016/j.bbrc.2017.11.154
- Open Access / Int'l Joint Research / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-15H05603
[Journal Article] Remaining questions related to the hourglass model in vertebrate evolution.2017
- Author(s)
  Naoki Irie
- Journal Title
  
  Current Opinion in Genetics & Development
  
  Volume: 45 Pages: 103-107
- DOI
  10.1016/j.gde.2017.04.004
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05603
[Journal Article] Centromere evolution and CpG methylation during vertebrate speciation2017
- Author(s)
  Ichikawa K, Tomioka S, Suzuki Y, Nakamura R, Doi K, Yoshimura J, Kumagai M, Inoue Y, Uchida Y, Irie N, Takeda H, Morishita S.
- Journal Title
  
  Nature Communications
  
  Volume: 1833 Pages: 1722-1730
- DOI
  10.1038/s41467-017-01982-7
- Open Access / Int'l Joint Research / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-15H05603, KAKENHI-PROJECT-15J03645, KAKENHI-PROJECT-16H06279
[Journal Article] Constrained vertebrate evolution by pleiotropic genes2017
- Author(s)
  Hu H, Uesaka M, Guo S, Shimai K, Lu TM, Li F, Fujimoto S, Ishikawa M, Liu S, Sasagawa Y, Zhang G, Kuratani S, Yu JK, Kusakabe TG, Khaitovich P, Irie N; EXPANDE Consortium.
- Journal Title
  
  Nature Ecology & Evolution
  
  Volume: 1 Pages: 1722-1730
- DOI
  10.1038/s41559-017-0318-0
- Int'l Joint Research / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-17H06385, KAKENHI-PLANNED-17H06387, KAKENHI-PROJECT-15H02416, KAKENHI-PROJECT-16H04724, KAKENHI-PROJECT-15H05603, KAKENHI-PROJECT-15J06414
[Journal Article] Unexpected link between polyketide synthase and calcum carbonate biomeneralization2015
- Author(s)
  Motoki Hojo, Ai Omi, Gen Hamanaka, Kazutoshi Shindo, Atsuko Shimada, Mariko Kondo, Takanori Narita, Masato Kiyomoto, Yohei Katsuyama, Yasuo Ohnishi, Naoki Irie and Hiroyuki Takeda
- Journal Title
  
  Development
  
  Volume: 1 Pages: 1-16
- DOI
  10.1186/s40851-014-0001-0
- Open Access / Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24570243, KAKENHI-PROJECT-24657148, KAKENHI-PLANNED-22127002
[Journal Article] Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs2014
- Author(s)
  Richard E.　et al.(著者55人中45番目）
- Journal Title
  
  Science
  
  Volume: 12 Pages: 1254449-1254449
- DOI
  10.1126/science.1254449
- Open Access / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22128003, KAKENHI-PROJECT-24570243
[Journal Article] Turtle ghrelin2014
- Author(s)
  Juan Pascual-Anaya, Amonida Zaddissa, Bronwen Aken, Guojie Zhang and Naoki Irie
- Journal Title
  
  Nature Genetics
  
  Volume: 46 Pages: 526-526
- DOI
  10.1038/ng.2988
- Open Access / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22128003, KAKENHI-PROJECT-24570243
[Journal Article] Evolutionary Origin of the Vertebrate Body Plan : The Problem of Head Segmentation2014
- Author(s)
  Onai, T., Irie, N., and Kuratani, S.
- Journal Title
  
  Annual Review of Genomics and Human Genetics
  
  Volume: 15 Pages: 443-459
- DOI
  10.1146/annurev-genom-091212-153404
- Open Access / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22128003, KAKENHI-PROJECT-24570243, KAKENHI-PROJECT-24770222
[Journal Article] The developmental hourglass model: a predictor of the basic body plan?2014
- Author(s)
  Naoki Irie*, and Shigeru Kuratani
- Journal Title
  
  Development
  
  Volume: 141 Pages: 4649-4655
- DOI
  10.1242/dev.107318
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24570243
[Journal Article] The developmental hourglass model: a predictor of the basic body plan?2014
- Author(s)
  Irie, N., and Kuratani, S.
- Journal Title
  
  Development
  
  Volume: 141 Pages: 4649-4655
- Acknowledgement Compliant / Open Access / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22128003
[Journal Article] The draft genomes of soft-shell turtle and green sea　turtle yield insights　into the development and　evolution of the turtle#8211;specific body plan2013
- Author(s)
  Wang, Z., Pascual-Anaya, J., Zadissa, A., Li, W., Niimura, Y., Huang, Z., Li, C., White, S., Xiong, Z., Fang, D., et al.
- Journal Title
  
  Nature Genet.
  
  Volume: 45 Pages: 701-706
- DOI
  10.1038/ng.2615
- Open Access / Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22128008, KAKENHI-PROJECT-23770271, KAKENHI-PROJECT-24570243, KAKENHI-PLANNED-22128003
[Journal Article] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Journal Title
  
  Nature Communications
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21710195
[Journal Article] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis2011
- Author(s)
  Irie, N., Kuratani, S.
- Journal Title
  
  Nature Commnications
  
  Volume: Mar22
- DOI
  10.1038/ncomms1248
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22128003
[Journal Article] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis.2011
- Author(s)
  Irie, N., Kuratani, S.
- Journal Title
  
  Nature Communications
  
  Volume: (in press)
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22128003
[Journal Article] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis2011
- Author(s)
  Irie,N., Kuratani,S
- Journal Title
  
  Nature Communications Mar.
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 複雑な遺伝子制御を持つ動物ほど進化可能性が低いかもしれない2018
- Author(s)
  入江直樹
- Organizer
  生命の起源および進化学会
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] The developmental hourglass model: the law of embryonic evolution?2017
- Author(s)
  Naoki Irie
- Organizer
  From Genetic Networks to a Cellular Wiring Diagram
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] The developmental hourglass model: the law of embryonic evolution?2017
- Author(s)
  Naoki Irie
- Organizer
  From Genetic Networks to a Cellular Wiring Diagram
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] What are the potential mechanisms that made vertebrates’ bodyplan conserved?2017
- Author(s)
  Naoki Irie
- Organizer
  50th Anniversary Meeting of Japanese Society of Developmental Biologists
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] What are the potential mechanisms that made vertebrates’ bodyplan conserved?2017
- Author(s)
  Naoki Irie
- Organizer
  50th Anniversary Meeting of Japanese Society of Developmental Biologists
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] In search for a general law of animal embryonic evolution?2017
- Author(s)
  Naoki Irie
- Organizer
  The 12th International Workshop on Advanced Genomics
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 複雑な遺伝子制御を持つ動物ほど進化可能性が低いかもしれない2017
- Author(s)
  Naoki Irie
- Organizer
  生命の起源および進化学会
- Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] In search for a general law of animal embryonic evolution?2017
- Author(s)
  Naoki Irie
- Organizer
  he 12th International Workshop on Advanced Genomics [12AGW]
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PLANNED-17H06387
[Presentation] Possible constraints on phenotypic evolvability of vertebrates2016
- Author(s)
  Naoki Irie
- Organizer
  The 1st B10K meeting
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] Why are vertebrates’ organogenesis stages evolutionarily conservative?2016
- Author(s)
  Naoki Irie
- Organizer
  Hot Spring Harbor Symposium
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] What makes vertebrate embryos to follow the hourglass-like conservation?2016
- Author(s)
  Naoki Irie
- Organizer
  Joint meeting of the 22nd International Congress of Zoology and the 87th meeting of Zoologial Society of Japa
- Int'l Joint Research / Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] Potential developmental constraints on vertebrate bodyplan evolution2016
- Author(s)
  Naoki Irie
- Organizer
  EuroEvoDevo
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 動物胚が発生と進化の法則性、砂時計モデルに従うのはなぜか？2015
- Author(s)
  入江直樹
- Organizer
  第53回　生物物理学会年会
- Place of Presentation
  金沢大学・金沢
- Year and Date
  2015-09-14
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 大進化スケールにおける発生進化の法則性と定量的検証る可能性2015
- Author(s)
  入江直樹
- Organizer
  平成27年度 JSBi生命システム理論研究会
- Place of Presentation
  東京医科歯科大学・東京
- Year and Date
  2015-11-27
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 発生システムが動物ボディプラン進化を制約している可能性2015
- Author(s)
  入江直樹
- Organizer
  BMB2015(第38回日本分子生物学会年会、第88回日本生化学会大会合同大会)
- Place of Presentation
  神戸国際会議場・神戸
- Year and Date
  2015-12-03
- Invited
- Data Source
  KAKENHI-PROJECT-15H05603
[Presentation] 祖先の姿を反映した発生期?EvoDevの古典問題と生命情報解析2014
- Author(s)
  入江　直樹
- Organizer
  遺伝研研究集会「ゲノム編集時代の分子進化」
- Place of Presentation
  三島市
- Year and Date
  2014-06-28
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 動物進化と個体発生の統合的理解に向けて2014
- Author(s)
  入江　直樹
- Organizer
  第39回日本分子生物学会年会
- Place of Presentation
  横浜市
- Year and Date
  2014-11-26
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Easily changed early embryogenesis?2014
- Author(s)
  Naoki Irie
- Organizer
  X Meeting of the Spanish Society for Developmental Biology
- Place of Presentation
  Seville, Spain
- Year and Date
  2014-10-14
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Evolutionary meanings of fish-like stages in our embryogenesis.2014
- Author(s)
  Naoki Irie
- Organizer
  Japan-Chile JSPS symposium "Genomic and epigenomic insights into vertebrate regeneration, development and evolution - Xenopus and fish as models"
- Place of Presentation
  Santiago, Chile
- Year and Date
  2014-11-04
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 大規模トランスクリプトームから挑む進化発生学の古典問題2014
- Author(s)
  入江　直樹
- Organizer
  日本遺伝学会第86回大会
- Place of Presentation
  長浜市
- Year and Date
  2014-09-16
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Remaining questions of the developmental hourglass model2014
- Author(s)
  Naoki Irie
- Organizer
  The fifth meeting of the European Society for Evolutionary Developmental Biology (EED)
- Place of Presentation
  Vienna, Austria
- Year and Date
  2014-07-24
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Is the hourglass model, unified theory of Evo-Devo?2014
- Author(s)
  Naoki Irie
- Organizer
  OIST Winter Course "Evolution of Complex Systems"
- Place of Presentation
  Ｏｋｉｎａｗａ，　Ｊａｐａｎ
- Year and Date
  2014-12-12
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Vertebrate phylotypic period as a source of basic body plan.2013
- Author(s)
  Naoki Irie
- Organizer
  International Society of Developmental Biology Conference 2013
- Place of Presentation
  Cancun, Mexico
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] カメゲノムと脊椎動物ボディプラン2013
- Author(s)
  入江直樹
- Organizer
  第60回　日本実験動物学会総会
- Place of Presentation
  筑波 (茨城県)
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Turtle also follows the general formulation of Embryonic Evolution.2013
- Author(s)
  Naoki Irie
- Organizer
  ICG-8
- Place of Presentation
  ShenZhen, China
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] カメも従う動物発生進化の法則性？2013
- Author(s)
  入江直樹
- Organizer
  第３６回　分子生物学会 Workshop 3AW14
- Place of Presentation
  神戸 (兵庫県)
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] ネッタイツメガエル胚発生期の包括的遺伝子発現データ2013
- Author(s)
  入江直樹
- Organizer
  第84回　動物学会
- Place of Presentation
  岡山 (岡山県)
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Vertebrates' basic body plan embedded in the waist of hourglass. Bottleneck in evolution and development2013
- Author(s)
  Naoki Irie
- Organizer
  15th Annual meeting of the Society of Evolutionary Studies, Japan
- Place of Presentation
  筑波 (茨城県)
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Relationship between Ontogeny and Phylogeny of vertebrates.2013
- Author(s)
  Naoki Irie
- Organizer
  German-Japan Colloquium -Cellular Biochemistry Shaping Animals-
- Place of Presentation
  Germany, KIT
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] What the Hourglass tells us about Vertebrate Development and Evolution2013
- Author(s)
  Naoki Irie
- Organizer
  CDB Symposium 2013
- Place of Presentation
  神戸、理化学研究所
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Toward integration of ontogeny and phylogeny of vertebrates2013
- Author(s)
  Naoki Irie
- Organizer
  （独）日本学術振興会本研究連絡センター主催コロキウム　第9回日独コロキウム「細胞生化学」
- Place of Presentation
  Karlsruhe Institute of Technology(KIT), Karlsruhe, Germany
- Year and Date
  2013-01-28
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 進化と発生の関係性をさぐるべく、de novo カメゲノム2013
- Author(s)
  入江直樹
- Organizer
  NGS現場の会　第３回大会
- Place of Presentation
  神戸　(兵庫県)
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] What the Hourglass tells us about Vertebrate Development and Evolution2013
- Author(s)
  Naoki Irie
- Organizer
  CDB Symposium 2013 “The Making of a Vertebrate”
- Place of Presentation
  RIKEN, Center for Developmental Biology, 兵庫県神戸市
- Year and Date
  2013-03-04
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 進化の歴史に縛られたカメのボディプラン2013
- Author(s)
  入江　直樹
- Organizer
  生命情報科学若手の会第4回研究会
- Place of Presentation
  岡崎コンファレンスセンター、愛知県岡崎市
- Year and Date
  2013-03-01
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Flexibility in early developmental system? Quantification of evolutionary distance between embryos2013
- Author(s)
  Naoki Irie
- Organizer
  First Annual Winter q-bio Meeting
- Place of Presentation
  Hilton Hawaiian Village Waikiki Beach Resort, Honolulu, Hawaii,USA
- Year and Date
  2013-02-18
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Turtle Genomes : Body Plan Evolution from Vertebrate Phylotype2013
- Author(s)
  Naoki Irie
- Organizer
  Plant and Animal Genome Asia 2013-The international conference on the status of plant and animal genome research-　（Work shop: de novo genome projects of exotic creatures）
- Place of Presentation
  Grand Copthorne Waterfront Hotel, Singapore
- Year and Date
  2013-03-17
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Turtle Genomes: Body Plan Evolution from Vertebrate Phylotype2013
- Author(s)
  Naoki Irie
- Organizer
  Plant and Animal Genome Conference Asia 2013
- Place of Presentation
  Singapore, Grand Copthorn Hotel
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] カメの起源：胚発生、ゲノム、そして化石の示す進化シナリオ2012
- Author(s)
  ○倉谷　滋、入江　直樹、工樂　樹洋、長島　寛、Juan Pascual Anaya, 川嶋-大宅芳枝、平沢達矢
- Organizer
  日本進化学会第14回東京大会
- Place of Presentation
  首都大学東京　東京都八王子市
- Year and Date
  2012-08-21
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Re-formulating the Relationship Between Evolution and Development2012
- Author(s)
  Naoki Irie
- Organizer
  The 7th International Conference on Genomics Bio-IT APAC2012
- Place of Presentation
  Kowloon Shangri-La, Hong Kong, China
- Year and Date
  2012-11-28
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 個体発生と系統発生が示す新たな謎2012
- Author(s)
  入江　直樹
- Organizer
  第24回高遠シンポジウム－生命の制御系の進化を探る-
- Place of Presentation
  高遠さくらホテル　長野県伊那市
- Year and Date
  2012-08-23
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Hopehul monster tackles the developmental hourglass model2012
- Author(s)
  Naoki Irie
- Organizer
  Asia-Pacific Developmental Biology Conference 2012 Satellite Meeting on Evo-Devo
- Place of Presentation
  Taipei Innovation City Convention Center, Taipei, Taiwan.
- Year and Date
  2012-10-05
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 進化と発生の関係性再定式化にむけて2012
- Author(s)
  入江　直樹
- Organizer
  Genomic Sciences Research Complex (GSC) 七夕ミーティング2012
- Place of Presentation
  理化学研究所　横浜研究所、神奈川県横浜市
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Hopeful monster tackles the developmental hourglass model.2012
- Author(s)
  Naoki Irie
- Organizer
  Asia Pacific Developmental Biology Conference, EvoDevo satellite Meeting
- Place of Presentation
  Taiwan, Taipei
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Experimental verification of the developmental hourglass model2012
- Author(s)
  Naoki Irie
- Organizer
  The fourth meeting of the European Society for Evolutionary Developmental Biology (EED)
- Place of Presentation
  Faculty of Sciences of the University of Lisbon, Lisbon, Portugal
- Year and Date
  2012-07-10
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 新規脊椎動物ゲノム道程とRNAseqによる遺伝子発現プロファイル比較2012
- Author(s)
  入江　直樹
- Organizer
  CiRA Genome epigenome and Bioinformatics Seminar Series presents 「次世代シーケンシングが切り開く医学研究と展望」
- Place of Presentation
  京都大学iPS細胞研究所　京都府京都市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 進化と発生の統合的理解を目指す2012
- Author(s)
  入江　直樹
- Organizer
  NGS現場の会　第２回研究会
- Place of Presentation
  ホテル阪急エキスポパーク　大阪府吹田市
- Year and Date
  2012-05-24
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] How evolution and Animal Development are Related to each other?2012
- Author(s)
  Z., Wang, A., Juan-Pascual, A., Zadissa, W., Li, Y., Niimura, Joint Turtles genome consortium middle authors, S., Kuratani, Y., Ye, B., Aken, G., Zhang, ○N., Irie
- Organizer
  第35回日本分子生物学会年会　ワークショップ
- Place of Presentation
  福岡国際会議場、福岡県福岡市
- Year and Date
  2012-12-11
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 大量情報解析技術で挑む進化発生学の古典問題2012
- Author(s)
  入江　直樹
- Organizer
  NAIST植物グローバル教育プロジェクト　平成24年度ワークショップ「実験生物学と情報学的アプローチのシームレスな融合
- Place of Presentation
  奈良先端科学技術大学院大学　奈良県生駒市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Re-formulating the Relationship Between Evolution and Development2012
- Author(s)
  Naoki Irie
- Organizer
  The 7th International Conference on Genomics & Bio-IT APAC 2012
- Place of Presentation
  HongKong, Kawoloon Shangrila hotel
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Molecular identification of the vertebrate phylotypic stage, 20th CDB Meeting2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  Molecular Bases for Evolution of Complex Traits
- Place of Presentation
  Kobe
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 観念形態学の古典問題に定量化で挑む2011
- Author(s)
  入江直樹
- Organizer
  定量生物学の会第四回年回2011年
- Place of Presentation
  名古屋市(招待講演)
- Year and Date
  2011-01-09
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 動物進化と発生にまつわる謎に挑む2011
- Author(s)
  入江直樹
- Organizer
  2011生命情報若手の会第3回研究会
- Place of Presentation
  岡崎市
- Year and Date
  2011-10-15
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Molecular identification of vertebrate phylotypic stage and epigenetic insights of vertebrate embryogenesis, CDB Symposium 20112011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  Epigenetic Landscape in Development and Disease
- Place of Presentation
  Kobe
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 脊椎動物ファイロタイプ仮説検証と発生学的構造特性の示唆2011
- Author(s)
  入江直樹
- Organizer
  生命情報若手の会・沖縄セミナー
- Place of Presentation
  沖縄市
- Year and Date
  2011-09-04
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] The Developmental hourglass model and phylotype of the vertebrates.2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  Joint meeting of the GFE and JSDB
- Place of Presentation
  Dresden, Germany
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 非モデル脊椎動物のgenome/transcriptome de novo assembly2011
- Author(s)
  入江直樹
- Organizer
  次世代シークエンサ現場の会第一回研究会
- Place of Presentation
  熱海市
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] ヘッケルの反復説から進化と発生の関係性解明は進んだか2011
- Author(s)
  入江直樹
- Organizer
  京都大学生体構造医学講座セミナー
- Place of Presentation
  京都市(招待講演)
- Year and Date
  2011-01-19
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 脊椎動物胚でみつかった進化的に保守的な発生段階2011
- Author(s)
  入江直樹
- Organizer
  神戸大学バイオシグナル研究センター重点研究チーム学術講演会
- Place of Presentation
  神戸市(招待講演)
- Year and Date
  2011-05-24
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Molecular identification of the vertebrate phylotypic stage.2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  20th CDB Meeting "Molecular Bases for Evolution of Complex Traits"
- Place of Presentation
  Kobe
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Haeckel's recapitulation theory? Or The developmental hourglass?2011
- Author(s)
  Naoki Irie
- Organizer
  The 1542th Biological Symposium
- Place of Presentation
  三島市(招待講演)
- Year and Date
  2011-11-21
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Transcriptome similarity reveals developmental basis for vertebrate body plan2011
- Author(s)
  Naoki Irie
- Organizer
  SMBE (Society for Molecular Biology and Evolution) 2011
- Place of Presentation
  京都市(招待講演)
- Year and Date
  2011-07-30
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Evolutionarily inflexible developmental programs?-Transcriptome similarity supports vertebrate phylotypic hypothesis-2011
- Author(s)
  Naoki Irie
- Organizer
  Young Researchers Conference on Evolutionary Genomics
- Place of Presentation
  東京都(招待講演)
- Year and Date
  2011-08-01
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] The developmental hourglass model and early divergence of vertebrate embryos2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  44^<th> Annual Meeting of the Japanese Society of Developmental Biology(第44回日本発生生物学会年会)
- Place of Presentation
  沖縄市(招待講演)
- Year and Date
  2011-05-21
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 発生砂時計モデルの証明と脊椎動物EvoDevo最前線2011
- Author(s)
  入江直樹
- Organizer
  大阪大学微生物病研究所部員会主催BRIDGEセミナー
- Place of Presentation
  吹田市(招待講演)
- Year and Date
  2011-06-17
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Molecular identification of vertebrate phylotypic stage and epigenetic insights of vertebrate embryogenesis2011
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  CDB Symposium 2011 "Epigenetic Landscape in Development and Disease"
- Place of Presentation
  Kobe
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Ontogeny and phylogeny of the vertebrates : testing the developmental hourglass model by transcriptome dynamycs comparisons.2010
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  Joint meeting of the SFBD and JSDB
- Place of Presentation
  Paris
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 脊椎動物ファイロタイプは原形論的な幻想か?2010
- Author(s)
  入江直樹、倉谷滋
- Organizer
  日本進化学会第12回大会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 脊椎動物ファイロタイプは原形論的な幻想か?2010
- Author(s)
  入江直樹, 倉谷滋
- Organizer
  日本進化学会
- Place of Presentation
  東京
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Testing phylotype hypothesis and structural insights of vertebrate embryogenesis2010
- Author(s)
  N.Irie
- Organizer
  日本分子生物学会
- Place of Presentation
  神戸
- Year and Date
  2010-12-07
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Testing phylotype hypothesis and structural insights of vertebrate embryogenesis2010
- Author(s)
  Naoki Irie, Shigeru Kuratani
- Organizer
  BMB 2010
- Place of Presentation
  神戸
- Year and Date
  2010-12-07
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] カメの甲の新規形態パターンをもたらした発生機構の解明にむけて公開シンポジウム「複合適応形質の進化」2010
- Author(s)
  入江直樹、倉谷滋
- Organizer
  領域会議
- Place of Presentation
  東京
- Year and Date
  2010-09-17
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] カメの甲の新規形態パターンをもたらした発生機構の解明にむけて2010
- Author(s)
  入江直樹, 倉谷滋
- Organizer
  公開シンポジウム「複合適応形質の進化」
- Place of Presentation
  東京
- Year and Date
  2010-09-17
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 脊椎動物ファイロタイプ仮説検証と発生学的構造特性の示唆2010
- Author(s)
  入江直樹、倉谷滋
- Organizer
  生命情報科学若手の会第2回研究会
- Place of Presentation
  三島
- Year and Date
  2010-10-09
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Testing phylotype hypothesis and structural insights of vertebrate embryogenesis.2010
- Author(s)
  入江直樹、倉谷滋
- Organizer
  BMB 2010(1T7-8 & 1P-1139)
- Place of Presentation
  神戸
- Year and Date
  2010-12-07
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] Is earlier developmental stage more conserved than later stages?～analysis of zebrafish transcriptome during embryogenesis～2009
- Author(s)
  入江直樹
- Organizer
  第42回発生生物学会
- Place of Presentation
  新潟市
- Data Source
  KAKENHI-PROJECT-21710195
[Presentation] 大規模トランスクリプトームから挑む進化発生学の古典問題
- Author(s)
  入江直樹
- Organizer
  日本遺伝学会第86回大会
- Place of Presentation
  長浜バイオ大学（滋賀県長浜市）
- Year and Date
  2014-09-17 – 2014-09-19
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Turtle also follows the general formulation of Embryonic Evolution.
- Author(s)
  Naoki Irie
- Organizer
  The 8th International Conference on Genomics in China (ICG-8)
- Place of Presentation
  ShenZhen, China.
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Evolutionary origin of the turtle body plan from genomic, anatomical and developmental perspectives.
- Author(s)
  Shigeru Kuratani, Hiroshi Nagashima, Naoki Irie.
- Organizer
  International Society of Developmental Biologists 17th International Congress of Developmental Biology
- Place of Presentation
  Cuncun Center Conventions & Exhibitions, Cancun, Mexico
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Easily changed early embryogenesis?
- Author(s)
  Naoki Irie
- Organizer
  X Meeting of the Spanish Society for Developmental Biology 2014
- Place of Presentation
  マドリッド（スペイン）
- Year and Date
  2014-10-13 – 2014-10-15
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] What does it take to be a turtle?-from embryology to genomics.
- Author(s)
  Shigeru Kuratani, Hiroshi Nagashima, Naoki Irie.
- Organizer
  10th International Congress of vertebrate Morphology
- Place of Presentation
  Fira Palace Hotel, Barcelona, Spain
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Flexibility in early animal developmental system.
- Author(s)
  Naoki Irie
- Organizer
  The 2nd International Workshop for Quantitative Biology
- Place of Presentation
  Osaka, Japan
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] カメゲノムと脊椎動物ボディプラン
- Author(s)
  入江　直樹
- Organizer
  第60回日本実験動物学会総会
- Place of Presentation
  つくば国際会議場　茨城県つくば市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] In search for more ancestral embryos
- Author(s)
  Naoki Irie
- Organizer
  CDB Symposium 2015
- Place of Presentation
  理化学研究所多細胞システム形成研究センター（兵庫県神戸市）
- Year and Date
  2015-03-13 – 2015-03-15
- Invited
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] Vertebrates' basic body plan embedded in the waist of hourglass
- Author(s)
  Naoki irie
- Organizer
  Vertebrates' basic body plan embedded in the waist of hourglass
- Place of Presentation
  筑波大学、茨城県つくば市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Remaining questions of the developmental hourglass model
- Author(s)
  Naoki Irie
- Organizer
  Euro EvoDevo 2014
- Place of Presentation
  ウィーン（オーストリア）
- Year and Date
  2014-07-22 – 2014-07-25
- Data Source
  KAKENHI-PROJECT-24570243
[Presentation] ネッタイツメガエル胚発生期の包括的遺伝子発現データ
- Author(s)
  入江　直樹
- Organizer
  日本動物学会　第84回大会
- Place of Presentation
  岡山大学津島キャンパス、岡山県岡山市
- Invited
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] Vertebrate phylotypic period as a source of basic body plan.
- Author(s)
  Naoki Irie, Guogie Zhang, Shigeru Kuratani
- Organizer
  International Society of Developmental Biologists 17th International Congress of Developmental Biology
- Place of Presentation
  Cuncun Center Conventions & Exhibitions, Cancun, Mexico
- Data Source
  KAKENHI-PLANNED-22128003
[Presentation] 動物進化と個体発生の統合的理解に向けて
- Author(s)
  入江直樹
- Organizer
  第37回　日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜（神奈川県横浜市）
- Year and Date
  2014-11-25 – 2014-11-27
- Data Source
  KAKENHI-PROJECT-24570243

1. KURATANI Shigeru (00178089)

# of Collaborated Projects: 2 results

# of Collaborated Products: 13 results
2. PASCUAL-ANAYA-JUAN (30594098)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
3. 金子邦彦 (30177513)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 深津武馬 (00357881)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 古澤力 (00372631)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 長谷部光泰 (40237996)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 重信秀治 (30399555)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 上坂将弘 (20756499)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. MORISHITA Shinichi

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
10. 島田敦子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
11. 武田洋幸

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
12. 尾内隆行

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
13. 鈴木穣

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
14. 中村保一

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
15. 新村芳人

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
16. 日下部岳広

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Irie Naoki 入江 直樹

IRIE Naoki 入江 直樹

Research Projects

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Co-Researchers

Evolutionary theory for constrained and directional diversitiesOngoing

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脊索動物胚発生の分子発生システムゆらぎ測定と進化的保存性Principal InvestigatorOngoing

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Testing possible contribution of maternal microchimeric cells to biliary atresiaPrincipal InvestigatorOngoing

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In search for a general tendency of chordate embryonic evolution by analyzing genetic expression patterns during developmentPrincipal Investigator

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Study toward evolutionary formulation of vertebrate embryogenesisPrincipal Investigator

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Changes in developmental program in the acquisition of novel morphological patterns of the turtle shell

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Identification of vertebrate phylotypic stage by transcriptome analysisPrincipal Investigator

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[Book] 胎児期に刻まれた進化の痕跡2015

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[Book] 細胞工学 2014年 １月号 特集号2014

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[Book] 胚発生のロバストネスは進化にバイアスをかけているか？2014

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[Book] New Principles in Developmental Processes2014

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[Book] 物理科学月刊誌 パリティ 2013年１月号 特集：物理科学、この１年 「進化と発生の関係性定式化にみる生物のやわらかさ」2013

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[Book] 脊椎動物ファイロタイプとボディプラン進化2013

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[Book] 遺伝 2013年 ３月号 「脊椎動物ファイロタイプとボディプラン進化」2013

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Irie Naoki 入江直樹

IRIE Naoki 入江直樹

[Book] 細胞工学　2014年１月号　特集号2014

[Book] 物理科学月刊誌　パリティ 2013年１月号特集：物理科学、この１年「進化と発生の関係性定式化にみる生物のやわらかさ」2013

[Book] 遺伝　2013年３月号「脊椎動物ファイロタイプとボディプラン進化」2013

[Journal Article] The draft genomes of soft-shell turtle and green sea　turtle yield insights　into the development and　evolution of the turtle#8211;specific body plan2013