Shimizu Nobutaka 清水伸隆

… Alternative Names

NOBUTAKA Shimizu 清水伸隆

SHIMIZU Nobutaka 清水伸隆

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Researcher Number	20450934
Other IDs	https://orcid.org/0000-0002-3636-1663
Affiliation (Current)	2024: 国立研究開発法人理化学研究所, 放射光科学研究センター, グループディレクター
Affiliation (based on the past Project Information) *help	2024: 国立研究開発法人理化学研究所, 放射光科学研究センター, グループディレクター 2019 – 2023: 大学共同利用機関法人高エネルギー加速器研究機構, 物質構造科学研究所, 教授 2012 – 2018: 大学共同利用機関法人高エネルギー加速器研究機構, 物質構造科学研究所, 准教授 2011 – 2012: 大学共同利用機関法人高エネルギー加速器研究機構, 物質構造科学研究所, 特別准教授 2009: Japan Synchrotron Radiation Research Institute, 利用研究促進部門, 研究員 2009: Japan Synchrotron Radiation Research Institute, 利用研究促進部門, 研究員 2008: Japan Synchrotron Radiation Research Institute, 利用研究促進部門・結晶構造解析チーム, 研究員
Review Section/Research Field	Principal Investigator Structural biochemistry / Basic Section 43020:Structural biochemistry-related / Risk sciences of radiation/Chemicals Except Principal Investigator Basic Section 38030:Applied biochemistry-related / Complex systems / Polymer chemistry / Structural biochemistry
Keywords	Principal Investigator 溶液構造 / SAXS / X線小角散乱 / X線溶液散乱 / 生体高分子 / 相関構造解析 / ゲル濾過クロマトグラフィー / Moore-Penrose疑似逆行列 / 低ランク行列因数分解 / 全自動解析 … More / SEC-SAXS / BioSAXS / 小角X線散乱 / 蛋白質 / クライオ / 生体膜 / 脂質膜変形 / GUV / 時分割測定 / ストップトフロー / 時分割X線小角散乱 / 生体膜変形 / 顕微分光装置 / SPring-8 / 放射光 / 紫外可視分光法 / タンパク質結晶 / タンパク質 / 放射線損傷 / X線結晶解析 / 損傷 … More Except Principal Investigator X線溶液散乱 / X線結晶構造解析 / 構造生物学 / 単粒子解析 / 小角散乱 / ゲノム編集 / 相関構造解析 / ゲノム編集タンパク質 / タンパク質科学 / Cas3 / 構造モデリング / 溶液散乱 / タンパク質ダイナミクス / シリアルフェムト秒結晶構造解析 / 動的構造解析 / 蛋白質結晶構造解析 / X線自由電子レーザー / 相分離構造 / 高分子構造・物性 / 蛍光分析 / 斜入射小角散乱 / 吸収端 / ブロック共重合体 / 薄膜 / 高分子薄膜 / 放射光 / 高分子 / 斜入射小角X線散乱 / 蛍光X線分析 / テンダーX線 / 有機薄膜 / 小角X線散乱 / X線結晶解析 / DEPFET検出器 / タンパク質溶液散乱 / タンパク質結晶構造解析 / ピクセル検出器 Less

Integrative Structural Biology Studies on the development for safe and efficient Cas3 genome editing tools
- Principal Investigator
  
  竹下浩平
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 38030:Applied biochemistry-related
- Research Institution
  Institute of Physical and Chemical Research
Development of fully automatic analysis software of SEC-SAXS serial data using information science techniquePrincipal Investigator
- Principal Investigator
  
  Shimizu Nobutaka
- Project Period (FY)
  2019 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 43020:Structural biochemistry-related
- Research Institution
  High Energy Accelerator Research Organization
時分割実験のための多様な反応誘起システムの開発
- Principal Investigator
  
  南後恵理子
- Project Period (FY)
  2019 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Tohoku University
  Institute of Physical and Chemical Research
Spatial-resolved structure analysis of organic thin films using simultaneous measurement of Fluorescence X-ray analysis and grazing-incidence small-angle X-ray scattering
- Principal Investigator
  
  Yamamoto Katsuhiro
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Polymer chemistry
- Research Institution
  Nagoya Institute of Technology
Precise analysis of protein solution structure by Cryo-BioSAXSPrincipal Investigator
- Principal Investigator
  
  Shimizu Nobutaka
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Structural biochemistry
- Research Institution
  High Energy Accelerator Research Organization
Time-resolved small-angle X-ray scattering of GUV deformed by F-BAR domainPrincipal Investigator
- Principal Investigator
  
  NOBUTAKA Shimizu
- Project Period (FY)
  2012 – 2013
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Structural biochemistry
- Research Institution
  High Energy Accelerator Research Organization
Construction of novel detector system for structural biology using ultrafast fine pixel detector
- Principal Investigator
  
  Wakatsuki Soichi
- Project Period (FY)
  2011 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Structural biochemistry
- Research Institution
  High Energy Accelerator Research Organization
Mechanism of Radiation damage of protein structure studied by X-ray diffraction and UV-Visible spectroscopy.Principal Investigator
- Principal Investigator
  
  SHIMIZU Nobutaka
- Project Period (FY)
  2008 – 2009
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Risk sciences of radiation/Chemicals
- Research Institution
  Japan Synchrotron Radiation Research Institute

[Book] 創薬研究のための相互作用解析パーフェクト2021
- Author(s)
  清水　伸隆（分担著者）、津本　浩平（編者）、前仲　勝実（編者）
- Total Pages
  368
- Publisher
  羊土社
- ISBN
  9784758122566
- Data Source
  KAKENHI-PROJECT-19K06516
[Journal Article] MOLASS: Software for automatic processing of matrix data obtained from small-angle X-ray scattering and UV–visible spectroscopy combined with size-exclusion chromatography2023
- Author(s)
  Yonezawa Kento、Takahashi Masatsuyo、Yatabe Keiko、Nagatani Yasuko、Shimizu Nobutaka
- Journal Title
  
  Biophysics and Physicobiology
  
  Volume: 20 Issue: 1 Pages: n/a
- DOI
  10.2142/biophysico.bppb-v20.0001
- ISSN
  2189-4779
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06516, KAKENHI-PLANNED-19H05781
[Journal Article] Ca <sup>2+</sup> ‐induced structural changes and intramolecular interactions in N‐terminal region of diacylglycerol kinase alpha2022
- Author(s)
  Takahashi Daisuke、Yonezawa Kento、Okizaki Yuki、Caaveiro Jose M. M.、Ueda Tadashi、Shimada Atsushi、Sakane Fumio、Shimizu Nobutaka
- Journal Title
  
  Protein Science
  
  Volume: 31 Issue: 7
- DOI
  10.1002/pro.4365
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K19747, KAKENHI-PROJECT-19K06516, KAKENHI-PROJECT-20H03205, KAKENHI-PLANNED-19H05781
[Journal Article] <i>K</i>-edge anomalous SAXS for protein solution structure modeling2022
- Author(s)
  Virk Karman、Yonezawa Kento、Choukate Komal、Singh Lucky、Shimizu Nobutaka、Chaudhuri Barnali
- Journal Title
  
  Acta Crystallographica Section D Structural Biology
  
  Volume: 78 Issue: 2 Pages: 204-211
- DOI
  10.1107/s205979832101247x
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K06516
[Journal Article] Crystal structure of GCN5 PCAF N-terminal domain reveals atypical ubiquitin ligase structure2020
- Author(s)
  Toma-Fukai Sachiko、Hibi Ryota、Naganuma Takao、Sakai Mashito、Saijo Shinya、Shimizu Nobutaka、Matsumoto Michihiro、Shimizu Toshiyuki
- Journal Title
  
  Journal of Biological Chemistry
  
  Volume: 295 Issue: 43 Pages: 14630-14639
- DOI
  10.1074/jbc.ra120.013431
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K06077, KAKENHI-PROJECT-19K06516, KAKENHI-PLANNED-19H05781, KAKENHI-PROJECT-19H03713
[Journal Article] Optimal Mutant Model of Human S100A3 Protein Citrullinated at Arg51 by Peptidylarginine Deiminase Type III and Its Solution Structural Properties2020
- Author(s)
  Ite, K., Yonezawa, K., Kitanishi, K., Shimizu, N., Unno, M.
- Journal Title
  
  ACS Omega
  
  Volume: 5 Issue: 8 Pages: 4032-4042
- DOI
  10.1021/acsomega.9b03618
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06507, KAKENHI-PROJECT-19K06516, KAKENHI-PLANNED-19H05781
[Journal Article] The Measles Virus V Protein Binding Site to STAT2 Overlaps That of IRF92020
- Author(s)
  Nagano Yuma、Sugiyama Aoi、Kimoto Madoka、Wakahara Takuya、Noguchi Yasuyo、Jiang Xinxin、Saijo Shinya、Shimizu Nobutaka、Yabuno Nana、Yao Min、Gooley Paul R.、Moseley Gregory W.、Tadokoro Takashi、Maenaka Katsumi、Ose Toyoyuki
- Journal Title
  
  Journal of Virology
  
  Volume: 94 Issue: 17
- DOI
  10.1128/jvi.01169-20
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K06505, KAKENHI-PROJECT-19K06516, KAKENHI-PROJECT-18KK0194, KAKENHI-PUBLICLY-19H04634, KAKENHI-PLANNED-19H05781
[Journal Article] Construction of a quadrangular tetramer and a cage-like hexamer from three-helix bundle-linked fusion proteins2019
- Author(s)
  Miyamoto Takaaki、Hayashi Yugo、Yoshida Keito、Watanabe Hiroki、Uchihashi Takayuki、Yonezawa Kento、Shimizu Nobutaka、Kamikubo Hironari、Hirota Shun
- Journal Title
  
  ACS Synthetic Biology
  
  Volume: 印刷中 Issue: 5 Pages: 1112-1120
- DOI
  10.1021/acssynbio.9b00019
- NAID
  120006801961
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-18H04512, KAKENHI-PUBLICLY-19H05389, KAKENHI-PLANNED-19H05781, KAKENHI-PROJECT-18H01837
[Journal Article] Structure of tRNA methyltransferase complex of Trm7 and Trm734 reveals a novel binding interface for tRNA recognition2019
- Author(s)
  Hirata Akira、Okada Keisuke、Yoshii Kazuaki、Shiraishi Hiroyuki、Saijo Shinya、Yonezawa Kento、Shimizu Nobutaka、Hori Hiroyuki
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 47 Issue: 20 Pages: 10942-10955
- DOI
  10.1093/nar/gkz856
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K06088, KAKENHI-PLANNED-19H05781
[Journal Article] Software Development for Analysis of Small-angle X-ray Scattering Data2016
- Author(s)
  N. Shimizu, K. Yatabe, Y. Nagatani, S. Saijyo, T. Kosuge, N. Igarashi
- Journal Title
  
  AIP Conference Proceedings
  
  Volume: in press
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K14467
[Journal Article] Upgrade of Small Angle X-ray Scattering Beamline, BL-6A at the Photon Factory2016
- Author(s)
  H. Takagi, N. Igarashi, T. Mori, S. Saijo, H. Ohta, Y. Nagatani, T. Kosuge, N.Shimizu
- Journal Title
  
  AIP Conference Proceedings
  
  Volume: in press
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K14467
[Journal Article] Structure of liposome encapsulating proteins characterized by X-ray scattering and shell-modeling2013
- Author(s)
  Hirai, M., Kimura, R., Takeuchi, K., Hagiwara, Y., Kawai-Hirai, R., Ohta, N., Igarashi, N. and Shimizu, N
- Journal Title
  
  Journal of Synchrotron Radiation
  
  Volume: 20 Issue: 6 Pages: 869-874
- DOI
  10.1107/s0909049513020827
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24657078, KAKENHI-PROJECT-25440063
[Journal Article] Refurbishing of Small-Angle X-ray Scattering Beamline, BL-6A at the Photon Factory2013
- Author(s)
  Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
- Journal Title
  
  J. Phys. : Conf. Ser.
  
  Volume: 425 Pages: 202008-202008
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24657078
[Journal Article] Structure of liposome encapsulating proteins characterized by X-ray scattering and shell-modeling2013
- Author(s)
  Hirai, M., Kimura, R., Takeuchi, K., Hagiwara, Y., Kawai-Hirai, R., Ohta, N., Igarashi, N. and Shimizu, N.
- Journal Title
  
  J. Synchrotron Rad.
  
  Volume: 20 Pages: 869-874
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24657078
[Journal Article] New high-brilliance beamline BL-15A of the Photon Factory2013
- Author(s)
  Igarashi, N., Shimizu, N., Koyama, A., Mori, T., Ohta, H., Niwa, Y., Nitani, H., Abe, H., Nomura, M., Shioya, T., Tsuchiya, K. and Ito, K.
- Journal Title
  
  J. Phys. : Conf. Ser.
  
  Volume: 425 Pages: 72016-72016
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24657078
[Journal Article] New high-brilliance beamline BL-15A of the Photon Factory2013
- Author(s)
  N Igarashi, N Shimizu, A Koyama, T Mori, H Ohta, Y Niwa, H Nitani, H Abe, M Nomura, T Shioya, K Tsuchiya and K Ito
- Journal Title
  
  Journal of Physics: Conference Series
  
  Volume: 425 Issue: 7 Pages: 72016-72016
- DOI
  10.1088/1742-6596/425/7/072016
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24657078
[Journal Article] Refurbishing of Small-Angle X-ray Scattering Beamline, BL-6A at the Photon Factory2013
- Author(s)
  N Shimizu, T Mori, N Igarashi, H Ohta, Y Nagatani, T Kosuge and K Ito
- Journal Title
  
  Journal of Physics: Conference Series
  
  Volume: 425 Issue: 20 Pages: 202008-202008
- DOI
  10.1088/1742-6596/425/20/202008
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24657078
[Journal Article] The binding mechanism of eIF2βwith its partner proteins, eIF5 and eIF2βε2012
- Author(s)
  Gai, Z., Kitagawa, Y., Tanaka, Y., Shimizu, N., Komoda, K., Tanaka, I. and Yao M.
- Journal Title
  
  Biochem. Biophys. Res. Commun.
  
  Volume: 423 Pages: 515-519
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24657078
[Journal Article] The binding mechanism of eIF2β with its partner proteins, eIF5 and eIF2Bε2012
- Author(s)
  Gai, Z., Kitagawa, Y., Tanaka, Y., Shimizu, N., Komoda, K., Tanaka, I. and Yao M.
- Journal Title
  
  Biochem. Biophys. Res. Commun.
  
  Volume: 423 Pages: 515-519
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24657078
[Journal Article] SPring-8構造生物ビームライン2010
- Author(s)
  熊坂崇、清水伸隆、馬場清喜、長谷川和也、上野剛、山本雅貴
- Journal Title
  
  薬学雑誌 130(5)
  
  Pages: 649-655
- NAID
  130000259450
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20710050
[Journal Article] 蛋白質微小結晶構造解析:その極限で目指すもの2009
- Author(s)
  平田邦生、清水伸隆、上野剛、熊坂崇、山本雅貴
- Journal Title
  
  蛋白質・核酸・酵素 54(12)
  
  Pages: 1477-1483
- Data Source
  KAKENHI-PROJECT-20710050
[Presentation] Photon FactoryのBioSAXS測定解析システムの現状2023
- Author(s)
  清水伸隆、谷田部景子、高橋正剛、永谷康子
- Organizer
  第36回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] Photon FactoryのBioSAXS測定解析システムの現状2023
- Author(s)
  清水伸隆、谷田部景子、高橋正剛、永谷康子
- Organizer
  第36回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] BioSAXS measurement and analysis system at the Photon Factory2022
- Author(s)
  Nobutaka Shimizu
- Organizer
  Asia Oceania International Conference on Synchrotron Radiation Instruments 2022 (AO-SRI2022)
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] Upgrade of BioSAXS measurement system at the Photon Factory2022
- Author(s)
  清水伸隆、高木秀彰、永谷康子、森丈晴、谷田部景子、高橋正剛、五十嵐教之
- Organizer
  第60回日本生物物理学会年会
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] Structural state estimation of biological macromolecules in solution using BioSAXS2022
- Author(s)
  Nobutaka Shimizu
- Organizer
  蛋白研セミナー：Frontier of Dynamic Structural Biology
- Invited
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] BioSAXS measurement and analysis system at the Photon Factory2022
- Author(s)
  Nobutaka Shimizu, Kento Yonezawa, Yasuko Nagatani, Keiko Yatabe, Masatsuyo Takahashi
- Organizer
  Asia Oceania International Conference on Synchrotron Radiation Instruments 2022
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] Structural state estimation of biological macromolecules in solution using BioSAXS2022
- Author(s)
  Nobutaka Shimizu
- Organizer
  蛋白研セミナー：Frontier of Dynamic Structural Biology （招待講演）
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] Development of software for automatic processing of matrix data measured with SEC-SAXS/UV-Vis. spectroscopy2021
- Author(s)
  Kento Yonezawa, Masatuyo Takahashi, Keishi Oyama, Keiko Yatabe, Yasuko Nagatani, Nobutaka Shimizu
- Organizer
  第59回日本生物物理学会年会
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] ヘテロクロマチン蛋白質(HP1α)の溶液構造解析2021
- Author(s)
  米澤健人、古川亜矢子、安達成彦、千田俊哉、清水伸隆、西村善文
- Organizer
  第34回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] Small-angle X-ray scattering beamlines at the photon factory2021
- Author(s)
  Nobutaka Shimizu, Hideaki Takagi, Yasuko Nagatani, Kento Yonezawa, Takeharu Mori, Keiko Yatabe, Masatsuyo Takahashi, Keishi Oyama, Noriyuki Igarashi
- Organizer
  IUCr 2021 - XXV General Assembly and Congress of the International Union of Crystallography
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] ヘテロクロマチン蛋白質(HP1α)の溶液構造解析2021
- Author(s)
  米澤健人、古川亜矢子、安達成彦、千田俊哉、清水伸隆、西村善文
- Organizer
  第34回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] Photon Factory の散乱ビームラインの現状2021
- Author(s)
  清水伸隆、高木秀彰、永谷康子、米澤健人、大田浩正、森丈晴、谷田部景子、高橋正剛、西條慎也、鈴木文俊、羽方望、五十嵐教之
- Organizer
  第34回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] Current Status of BioSAXS at the Photon Factory2020
- Author(s)
  Nobutaka Shimizu, Kento Yonezawa, Masatsuyo Takahashi, Keiko Yatabe, Yasuko Nagatani
- Organizer
  第58回日本生物物理学会年会
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] SEC-SAXS による分子間相互作用測定解析システム2020
- Author(s)
  清水伸隆
- Organizer
  第33回日本放射光学会年会・放射光科学合同シンポジウム
- Invited
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] Recent Progress of BioSAXS Equipment for Complex Molecular Systems at The Photon Factory2020
- Author(s)
  Kento Yonezawa, Masatsuyo Takahashi, Keiko Yatabe, Yasuko Nagatani, Yugo Hayashi, Shinji Amano, Hironari Kamikubo, Nobutaka Shimizu
- Organizer
  第20回日本タンパク質科学会年会
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] Recent Progress of BioSAXS Equipment for Complex Molecular Systems at The Photon Factory2020
- Author(s)
  Kento Yonezawa, Masatsuyo Takahashi, Keiko Yatabe, Yasuko Nagatani, Yugo Hayashi, Shinji Amano, Hironari Kamikubo, Nobutaka Shimizu
- Organizer
  第20回日本タンパク質科学会年会
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] Current Status of BioSAXS at the Photon Factory2020
- Author(s)
  Nobutaka Shimizu, Kento Yonezawa, Masatsuyo Takahashi, Keiko Yatabe, Yasuko Nagatani
- Organizer
  第58回日本生物物理学会年会
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] Recent hybrid methods approach utilizing Biological Small Angle X-ray Scattering at the Photon Factory2020
- Author(s)
  Kento Yonezawa, Ayako Furukawa, Naruhiko Adachi, Toshiya Senda, Nobutaka Shimizu, Yoshifumi Nishimura
- Organizer
  第58回日本生物物理学会年会
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] Photon Factoryの小角散乱ビームラインの現状2020
- Author(s)
  清水伸隆、高木秀彰、永谷康子、米澤健人、大田浩正、森丈晴、谷田部景子、高橋正剛、西條慎也、鈴木文俊、羽方望、五十嵐教之
- Organizer
  第34回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] Progress of Biological Small-Angle X-ray Scattering at the Photon Factory2019
- Author(s)
  Nobutaka Shimizu, Kento Yonezawa, Masatsuyo Takahashi, Keiko Yatabe, Yasuko Nagatani
- Organizer
  第57回日本生物物理学会年会
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] BioSAXS experiment at the Photon Factory2019
- Author(s)
  Nobutaka Shimizu, Kento Yonezawa, Masatsuyo Takahashi, Keiko Yatabe, Yasuko Nagatani
- Organizer
  International Symposium on Diffraction Structural BIology 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] Progress of Biological Small-Angle X-ray scattering at the Photon Factory2019
- Author(s)
  Nobutaka Shimizu, Kento Yonezawa, Masatsuyo Takahashi, Keiko Yatabe, Yasuko Nagatani
- Organizer
  第57回日本生物物理学会年会
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] Photon Factoryにおけるタンパク質溶液試料の小角X線散乱解析2019
- Author(s)
  清水伸隆
- Organizer
  第19回日本蛋白質科学会年会・第71回日本細胞生物学会大会合同年次大会
- Data Source
  KAKENHI-PROJECT-19K06516
[Presentation] BioSAXS experiment at the Photon Factory2019
- Author(s)
  Shimizu, Nobutaka; Yonezawa, Kento; Takahashi, Masatuyo; Yatabe, Keiko, Nagatani, Yasuko
- Organizer
  International Symposium on Diffraction Structural BIology 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] SEC-SAXS による分子間相互作用測定解析システム2019
- Author(s)
  清水伸隆
- Organizer
  第33回日本放射光学会年会・放射光科学合同シンポジウム
- Invited
- Data Source
  KAKENHI-PLANNED-19H05781
[Presentation] 相関構造解析におけるX線小角散乱2018
- Author(s)
  清水伸隆
- Organizer
  第31回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PROJECT-15K14467
[Presentation] Photon FactoryにおけるBioSAXS測定解析2017
- Author(s)
  清水伸隆、米澤健人、谷田部景子、高橋正剛、永谷康子、五十嵐教之
- Organizer
  日本結晶学会平成29年度年会
- Data Source
  KAKENHI-PROJECT-15K14467
[Presentation] テンダーX線を利用した斜入射小角散乱法による高分子薄膜の構造解析2017
- Author(s)
  高木秀彰、清水伸隆、五十嵐教之、森丈晴、西條慎也、永谷康子、大田浩正、山本勝宏
- Organizer
  第22回高分子分析討論会
- Data Source
  KAKENHI-PROJECT-17H03065
[Presentation] Photon Factoryの小角散乱ビームラインの現状2017
- Author(s)
  清水伸隆、高木秀彰、西條慎也、永谷康子、森丈晴、大田浩正、谷田部景子、高橋正剛、米澤健人、小菅隆、五十嵐教之
- Organizer
  第30回日本放射光学会年会・放射光科学合同シンポジウム
- Place of Presentation
  神戸芸術センター（兵庫県・神戸市）
- Year and Date
  2017-01-07
- Data Source
  KAKENHI-PROJECT-15K14467
[Presentation] 放射光小角Ｘ線散乱装置の概要および最新情報2017
- Author(s)
  清水伸隆
- Organizer
  日本化学会第97春季年会
- Place of Presentation
  慶應義塾大学日吉キャンパス（神奈川県・横浜市）
- Year and Date
  2017-03-16
- Data Source
  KAKENHI-PROJECT-15K14467
[Presentation] Solution structure analysis of the protein complex using SEC-SAXS2017
- Author(s)
  Nobutaka Shimizu
- Organizer
  第55回日本生物物理学会年会
- Data Source
  KAKENHI-PROJECT-15K14467
[Presentation] The DEPFET ultra-fast fine-pitch pixel detector for particle and photon detection2015
- Author(s)
  L. Andricek, C. Koffmane, J. Ninkovic, C. Kiesling, H-G. Moser, F. M�??ller, M. Ritter, K. Hara, N. Matsugaki, H. Miyake, S. Tanaka, N. Shimizu, Y. Ushiroda, T. Higuchi, S. Wakatsuki
- Organizer
  12th International Conference on Synchrotron Radiation Instrumentation (SRI 2015)
- Place of Presentation
  New York (USA)
- Year and Date
  2015-07-06
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23227003
[Presentation] PFにおけるBioSAXS測定システムの高度化2015
- Author(s)
  清水伸隆，西條慎也，永谷康子，谷田部景子，大田浩正，森丈晴，高木秀彰，小菅隆，五十嵐教之
- Organizer
  日本結晶学会
- Place of Presentation
  大阪府立大学中百舌鳥キャンパス(大阪府堺市)
- Year and Date
  2015-10-17
- Data Source
  KAKENHI-PROJECT-15K14467
[Presentation] Software development for analysis of small-angle X-ray scattering data2015
- Author(s)
  Shimizu, N., Yatabe, K., Nagatani, Y., Saijyo, S., Kosuge, T. and Igarashi, N.
- Organizer
  12th International Conference on Synchrotron Radiation Instrumentation
- Place of Presentation
  New York (USA)
- Year and Date
  2015-07-06
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K14467
[Presentation] PF BL-15A : 高輝度XAFS/XRF/SAXSビームライン2014
- Author(s)
  五十嵐教之、小山篤、森丈晴、上條亜衣、西條慎也、大田浩正、仁谷浩明、丹羽尉博、阿部仁、清水伸隆
- Organizer
  第27回日本放射光学会年会・放射光科学合同シンポジウム
- Place of Presentation
  広島国際会議場(ポスター)
- Year and Date
  2014-01-11
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] PF BL-15A：高輝度 XAFS/XRF/SAXS ビームライン2014
- Author(s)
  五十嵐教之、小山篤、森丈晴、上條亜衣、西條慎也、大田浩正、仁谷浩明、丹羽尉博、阿部仁、清水伸隆
- Organizer
  第27回日本放射光学会年会・放射光科学合同シンポジウム
- Place of Presentation
  広島国際会議場
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] BL-15A : Semi-microbeam XAFS/XRF and High- brilliance SAXS beamline at Photon Factory2013
- Author(s)
  Igarashi, N., Koyama, A., Mori, T., Ohta, H., Kamijo, A., Saijyo, S., Niwa, Y., Nitani, H., Abe, H. and Shimizu, N.
- Organizer
  11th International Conference on Biology and Synchrotron Radiation
- Place of Presentation
  Hamburg、Germany(ポスター)
- Year and Date
  2013-09-09
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Photon Factoryの小角散乱ビームラインの現状2013
- Author(s)
  清水伸隆、五十嵐教之、森丈晴、大田浩正、永谷康子、小菅隆、伊藤健二
- Organizer
  第26回日本放射光学会年会・放射光科学合同シンポジウム
- Place of Presentation
  名古屋大学（名古屋）
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Photon Factoryの小角散乱ビームラインの現状2013
- Author(s)
  清水伸隆、五十嵐教之、森丈晴、大田浩正、永谷康子、小菅隆、伊藤健二
- Organizer
  第26回日本放射光学会年会・放射光科学合同シンポジウム
- Place of Presentation
  名古屋大学(口頭)
- Year and Date
  2013-01-13
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] BL-15A: Semi-microbeam XAFS/XRF and High-brilliance SAXS beamline at Photon Factory2013
- Author(s)
  Igarashi, N., Koyama, A., Mori, T., Ohta, H., Kamijo, A., Saijyo, S., Niwa, Y., Nitani, H., Abe, H. and Shimizu, N.
- Organizer
  11th International Conference on Biology and Synchrotron Radiation
- Place of Presentation
  Grand Elysee Hotel Hamburg, Germany
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Improvement and Upgrade Plan of Small-Angle X-ray Scattering Beamlines at Photon Factory2013
- Author(s)
  Shimizu, N., Mori, T., Ohta, H., Nagatani, Y., Saijyo, S., Kamijyo, A., Kosuge, T. and Igarashi, N.
- Organizer
  11th International Conference on Biology and Synchrotron Radiation
- Place of Presentation
  Hamburg、Germany(ポスター)
- Year and Date
  2013-09-09
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Improvement and Upgrade Plan of Small-Angle X-ray Scattering Beamlines at Photon Factory2013
- Author(s)
  Shimizu, N., Mori, T., Ohta, H., Nagatani, Y., Saijyo, S., Kamijyo, A., Kosuge, T. and Igarashi, N.
- Organizer
  11th International Conference on Biology and Synchrotron Radiation
- Place of Presentation
  Grand Elysee Hotel Hamburg, Germany
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Refurbishment of SAXS beamlines at Photon Factory2013
- Author(s)
  Nobutaka Shimizu
- Organizer
  第51回日本生物物理学会年会
- Place of Presentation
  国立京都国際会館
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Refurbishment of SAXS beamlines at Photon Factory2013
- Author(s)
  Nobutaka Shimizu
- Organizer
  第51回日本生物物理学会年会
- Place of Presentation
  国立京都国際会館(口頭(企画講演))
- Year and Date
  2013-10-28
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Current Status of Small Angle X-ray Scattering Beamlines at Photon Factory2012
- Author(s)
  Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
- Organizer
  第50回日本生物物理学会年会
- Place of Presentation
  名古屋大学(ポスター)
- Year and Date
  2012-09-24
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Development of Small-Angle X-ray Scattering Beamline, BL-6A at the Photon Factory2012
- Author(s)
  Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
- Organizer
  11th International Conference on Synchrotron Radiation Instrumentation (SRI2012)
- Place of Presentation
  Center of Congress (Lyon, France)
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Current Status of Small Angle X-ray Scattering Beamlines at Photon Factory2012
- Author(s)
  Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
- Organizer
  15th International Small-Angle Scattering conference (SAS2012)
- Place of Presentation
  Sydney Convention & Exhibition Centre　(Sydney, Australia)
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Development of Small-Angle X-ray Scattering Beamline, BL-6A at the Photon Factory2012
- Author(s)
  Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
- Organizer
  11th International Conference on Synchrotron Radiation Instrumentation (SRI2012)
- Place of Presentation
  Lyon, France(ポスター)
- Year and Date
  2012-07-11
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Current Status of Small Angle X-ray Scattering Beamlines at Photon Factory2012
- Author(s)
  Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
- Organizer
  第50回日本生物物理学会年会
- Place of Presentation
  名古屋大学（名古屋）
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Refurbishment and New Construction of Small-Angle X-ray Scattering beamlines at the Photon Factory2012
- Author(s)
  N. Shimizu, N. Igarashi, T. Mori, H. Ohta, Y. Nagatani, T. Kosuge, and K. Ito
- Organizer
  2nd International GISAS Meeting (Satellite meeting of SAS2012)
- Place of Presentation
  京都工芸繊維大学（京都）
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] Current Status of Small Angle X-ray Scattering Beamlines at Photon Factory2012
- Author(s)
  Shimizu, N., Mori, T., Igarashi, N., Ohta, H., Nagatani, Y., Kosuge, T. and Ito, K.
- Organizer
  15th International Small-Angle Scattering conference (SAS2012)
- Place of Presentation
  Sydney、Australia(ポスター)
- Year and Date
  2012-11-20
- Data Source
  KAKENHI-PROJECT-24657078
[Presentation] SPring-8構造生物学IIIビームラインBL38B1の現状2010
- Author(s)
  馬場清喜、水野伸宏、星野武司、牧野正知、長谷川和也、清水伸隆、上野剛、引間孝明、村上博則、山本雅貴、熊坂崇
- Organizer
  第23回日本放射光学会年会
- Place of Presentation
  兵庫県(ポスター)
- Year and Date
  2010-01-08
- Data Source
  KAKENHI-PROJECT-20710050
[Presentation] SPring-8構造生物学IビームラインBL41XUの現状2010
- Author(s)
  清水伸隆、河野能顕、牧野正知、長谷川和也、村上博則、上野剛、馬場清喜、伊藤廉、二澤宏司、山本雅貴、熊坂崇
- Organizer
  第23回日本放射光学会年会
- Place of Presentation
  兵庫県(ポスター)
- Year and Date
  2010-01-08
- Data Source
  KAKENHI-PROJECT-20710050
[Presentation] 紫外可視分光法によるタンパク質結晶の放射線損傷の評価2009
- Author(s)
  清水伸隆、清水哲哉、馬場清喜、長谷川和也、山本雅貴、熊坂崇
- Organizer
  日本結晶学会2009年年会
- Place of Presentation
  兵庫県(ポスター)
- Year and Date
  2009-12-05
- Data Source
  KAKENHI-PROJECT-20710050
[Presentation] SPring-8構造生物学IビームラインBL41XUの現状2009
- Author(s)
  清水伸隆、河野能顕、河本正秀、長谷川和也、上野剛、平田邦生、大端通、古川行人、工藤統吾、馬場清喜、清水哲哉、二澤宏司、山本雅貴、熊坂崇
- Organizer
  第22回日本放射光学会年会
- Place of Presentation
  東京都(ポスター)
- Year and Date
  2009-01-11
- Data Source
  KAKENHI-PROJECT-20710050
[Presentation] 紫外可視分光法によるタンパク質結晶の放射線損傷の評価2009
- Author(s)
  清水伸隆
- Organizer
  本結晶学会
- Place of Presentation
  関西学院大学西宮上ケ原キャンパス(兵庫県)
- Year and Date
  2009-12-05
- Data Source
  KAKENHI-PROJECT-20710050
[Presentation] SPring-8構造生物学IIIビームラインBL38B1の現状2009
- Author(s)
  馬場清喜、牧野正知、長谷川和也、清水伸隆、上野剛、村上博則、山本雅貴、熊坂崇
- Organizer
  第22回日本放射光学会年会
- Place of Presentation
  東京都(ポスター)
- Year and Date
  2009-01-11
- Data Source
  KAKENHI-PROJECT-20710050
[Presentation] タンパク質結晶の放射線損傷とその定量的評価に基づく測定法2008
- Author(s)
  清水伸隆
- Organizer
  第46回日本生物物理学会年会
- Place of Presentation
  福岡県(シンポジウム、口頭)
- Year and Date
  2008-12-03
- Data Source
  KAKENHI-PROJECT-20710050
[Presentation] タンパク質結晶の放射線損傷とその定量的評価に基づく測定法2008
- Author(s)
  清水伸隆
- Organizer
  日本生物物理学会
- Place of Presentation
  福岡国際会議場
- Year and Date
  2008-12-03
- Data Source
  KAKENHI-PROJECT-20710050
[Presentation] Study for development of novel detector system for structural biology using ultrafast fine pixel detector
- Author(s)
  HARA, Koji (KEK IPNS), WAKATSUKI, Soichi (KEK IMSS, SLAC Photon Science, Stanford Univ. School of Medicine), SHIMIZU, Nobutaka (KEK IMSS), MATSUGAKI, Naohiro (KEK IMSS), USHIRODA, Yutaka (KEK IPNS), TANAKA, Shuji (KEK IPNS), MIYAKE, Hideki (KEK IPNS), HIGUCHI, Takeo (Kavli IPMU)
- Organizer
  5th Asian Forum for Accelerators and Detectors (AFAD)
- Place of Presentation
  Australian Synchrotron, Melbourne, Australia
- Data Source
  KAKENHI-PROJECT-23227003

1. Wakatsuki Soichi (00332114)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
2. KONNO Tomoyuki (60751518)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. KOBAYASHI Aine (50794749)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. KAWASAKI Masato (00342600)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. IGARASHI Noriyuki (80300672)

# of Collaborated Projects: 1 results

# of Collaborated Products: 21 results
6. Yamamoto Katsuhiro (30314082)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
7. 後田裕 (10342601)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
8. 三宅秀樹 (20403115)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
9. 樋口岳雄 (40353370)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
10. 松垣直宏 (50342598)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
11. 田中秀治 (80311124)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
12. 原康二 (90432236)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
13. PULVERMACHER Christian (10788087)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. 平木雅彦 (20282676)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. 高木秀彰 (10720261)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
16. 南後恵理子 (90376947)

# of Collaborated Projects: 1 results

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17. 大和田成起 (90725962)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
18. 宮下治 (10620528)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
19. 庄司光男 (00593550)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
20. 篠田恵子 (80646951)

# of Collaborated Projects: 1 results

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21. 竹下浩平 (80346808)

# of Collaborated Projects: 1 results

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22. 浜口祐 (00587876)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
23. 吉見一人 (50709813)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
24. Kiesling Christian

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
25. Andricek Ladislav

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
26. Koffmane Christian

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
27. Ninkovic Jelena

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
28. Moser Hans-Günther

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
29. Muller Felix B.

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
30. Konorov Igor

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
31. Rummel Stefan

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
32. Ritter Martin

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
33. 内橋貴之

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
34. 藤間祥子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
35. 坂根郁夫

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
36. 平田章

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
37. 海野昌喜

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
38. 姚閔

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Shimizu Nobutaka 清水 伸隆

NOBUTAKA Shimizu 清水 伸隆

SHIMIZU Nobutaka 清水 伸隆

Research Projects

Research Products

Co-Researchers

Integrative Structural Biology Studies on the development for safe and efficient Cas3 genome editing tools

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Development of fully automatic analysis software of SEC-SAXS serial data using information science techniquePrincipal Investigator

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時分割実験のための多様な反応誘起システムの開発

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Spatial-resolved structure analysis of organic thin films using simultaneous measurement of Fluorescence X-ray analysis and grazing-incidence small-angle X-ray scattering

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Precise analysis of protein solution structure by Cryo-BioSAXSPrincipal Investigator

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Time-resolved small-angle X-ray scattering of GUV deformed by F-BAR domainPrincipal Investigator

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Construction of novel detector system for structural biology using ultrafast fine pixel detector

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Mechanism of Radiation damage of protein structure studied by X-ray diffraction and UV-Visible spectroscopy.Principal Investigator

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[Book] 創薬研究のための相互作用解析パーフェクト2021

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[Journal Article] MOLASS: Software for automatic processing of matrix data obtained from small-angle X-ray scattering and UV–visible spectroscopy combined with size-exclusion chromatography2023

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[Journal Article] Ca <sup>2+</sup> ‐induced structural changes and intramolecular interactions in N‐terminal region of diacylglycerol kinase alpha2022

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[Journal Article] <i>K</i>-edge anomalous SAXS for protein solution structure modeling2022

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[Journal Article] Crystal structure of GCN5 PCAF N-terminal domain reveals atypical ubiquitin ligase structure2020

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Shimizu Nobutaka 清水伸隆

NOBUTAKA Shimizu 清水伸隆

SHIMIZU Nobutaka 清水伸隆