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Tan Cheng  譚 丞

Researcher Number 20865886
Other IDs
  • ORCIDhttps://orcid.org/0000-0002-8957-4267
Affiliation (Current) 2025: 国立研究開発法人理化学研究所, 計算科学研究センター, 研究員
Affiliation (based on the past Project Information) *help 2023 – 2025: 国立研究開発法人理化学研究所, 計算科学研究センター, 研究員
2021 – 2022: 国立研究開発法人理化学研究所, 計算科学研究センター, 特別研究員
Review Section/Research Field
Principal Investigator
Basic Section 43040:Biophysics-related
Except Principal Investigator
Transformative Research Areas, Section (III)
Keywords
Except Principal Investigator
長鎖ノンコーディングRNA / Hero蛋白質 / 液液相分離 / 天然変性蛋白質 / 分子動力学シミュレーション
  • Research Projects

    (2 results)
  • Research Products

    (12 results)
  • Co-Researchers

    (3 People)
  •  Multiphase biomolecular condensation studied with large-scale molecular dynamics simulationsPrincipal Investigator

    • Principal Investigator
      譚 丞
    • Project Period (FY)
      2025 – 2027
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43040:Biophysics-related
    • Research Institution
      Institute of Physical and Chemical Research
  •  非ドメイン型バイオポリマーの分子動力学計算

    • Principal Investigator
      依田 隆夫
    • Project Period (FY)
      2021 – 2025
    • Research Category
      Grant-in-Aid for Transformative Research Areas (A)
    • Review Section
      Transformative Research Areas, Section (III)
    • Research Institution
      Nagahama Institute of Bio-Science and Technology

All 2024 2023 2022

All Journal Article Presentation Book

  • [Book] 分子シミュレーションで理解する相分離のメカニズム(「フロントランナー直伝 相分離解析プロトコール(加藤・白木・中川 編)」の p.235-2412022

    • Author(s)
      Cheng Tan,新津 藍,依田隆夫,杉田有治
    • Total Pages
      7
    • Publisher
      羊土社
    • ISBN
      9784758122597
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Journal Article] GENESIS CGDYN: large-scale coarse-grained MD simulation with dynamic load balancing for heterogeneous biomolecular systems2024

    • Author(s)
      Jung Jaewoon、Tan Cheng、Sugita Yuji
    • Journal Title

      Nature Communications

      Volume: 15 Issue: 1 Pages: 3370-3370

    • DOI

      10.1038/s41467-024-47654-1

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-21H05249, KAKENHI-PLANNED-21H05282, KAKENHI-PROJECT-19H05645
  • [Journal Article] Highly charged proteins and their repulsive interactions antagonize biomolecular condensation2023

    • Author(s)
      Cheng Tan, Ai Niitsu, Yuji Sugita
    • Journal Title

      JACS Au

      Volume: 3 Issue: 3 Pages: 834-848

    • DOI

      10.1021/jacsau.2c00646

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-21H05249, KAKENHI-PLANNED-21H05282, KAKENHI-PROJECT-19H05645, KAKENHI-PROJECT-21J40162
  • [Journal Article] Micelle-like clusters in phase-separated Nanog condensates: A molecular simulation study2023

    • Author(s)
      Mizutani Azuki、Tan Cheng、Sugita Yuji、Takada Shoji
    • Journal Title

      PLOS Computational Biology

      Volume: 19 Issue: 7 Pages: e1011321-e1011321

    • DOI

      10.1371/journal.pcbi.1011321

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Journal Article] Implementation of residue-level coarse-grained models I GENESIS for large-scale molecular dynamics simulations2022

    • Author(s)
      Cheng Tan, Jaewoon Jung, Chigusa Kobayashi, Diego Ugarte, Shoji Takada, Yuji Sugita
    • Journal Title

      PLoS Comp. Biol.

      Volume: 18 Issue: 4 Pages: e1009578-e1009578

    • DOI

      10.1371/journal.pcbi.1009578

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-21H05249, KAKENHI-PLANNED-21H05282, KAKENHI-PROJECT-19H05645
  • [Presentation] Acceleration of residue-level coarse-grained molecular dynamics by efficient parallelization2023

    • Author(s)
      J. Jung, C. Tan, C. Kobayashi, D. Ugarte, Y. Sugita
    • Organizer
      The 67th Biophysical Society Annual Meeting
    • Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Repulsive interaction and secondary structure of highly charged proteins in regulating biomolecular condensation2023

    • Author(s)
      Cheng Tan, Ai Niitsu, Yuji Sugita
    • Organizer
      The 67th Biophysical Society Annual Meeting
    • Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Regulation of Biomolecular Condensation Studied with Large-Scale Coarse-Grained Molecular Dynamics Simulations in GENESIS2023

    • Author(s)
      Cheng Tan
    • Organizer
      第61回日本生物物理学会年会
    • Invited
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Developments and Applications in Multiscale Molecular Dynamics Simulations for Biomolecular Condensation Using GENESIS2023

    • Author(s)
      Cheng Tan
    • Organizer
      2023年度第2回計算科学フォーラム
    • Invited
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Acceleration of residue-level coarse-grained molecular dynamics by new development of parallelization2022

    • Author(s)
      J. Jung, C. Tan, C. Kobayashi, D. Ugarte, Y. Sugita
    • Organizer
      第60回日本生物物理学会年会
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Multi-scale molecular dynamics study of repulsive interactions in regulating biomolecular condensation.2022

    • Author(s)
      Cheng Tan, Ai Niitsu, Yuji Sugita
    • Organizer
      The 32nd Tokyo RNA Club, RIKEN Symposium
    • Invited
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Molecular dynamics study of phase behaviors of heat-resistant obscure proteins and their anti-aggregation functions.2022

    • Author(s)
      Cheng Tan, Ai Niitsu, Yuji Sugita
    • Organizer
      第60回日本生物物理学会年会
    • Data Source
      KAKENHI-PLANNED-21H05282
  • 1.  依田 隆夫 (50367900)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 1 results
  • 2.  鄭 載運 (10554701)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 2 results
  • 3.  杉田 有治
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 3 results

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