Yoshioka Yuki 善岡祐輝

… Alternative Names

善岡祐輝ヨシオカユウキ

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Researcher Number	20982169
Other IDs	https://orcid.org/0000-0001-6348-4629
Affiliation (Current)	2025: 沖縄科学技術大学院大学, マリンゲノミックスユニット, リサーチフェロー
Affiliation (based on the past Project Information) *help	2023 – 2025: 沖縄科学技術大学院大学, マリンゲノミックスユニット, リサーチフェロー 2023: 沖縄科学技術大学院大学, マリンゲノミックスユニット, 特別研究員(PD) 2020 – 2021: 東京大学, 新領域創成科学研究科, 特別研究員(DC1)
Review Section/Research Field	Principal Investigator Basic Section 45040:Ecology and environment-related / Basic Section 43050:Genome biology-related Except Principal Investigator Transformative Research Areas, Section (II) / Basic Section 40030:Aquatic bioproduction science-related
Keywords	Principal Investigator 共生 / サンゴ / 褐虫藻 / トランスクリプトーム / 比較ゲノム解析 / ゲノム / 遺伝子 Except Principal Investigator サンゴ礁 / 褐虫藻 / スナギンチャク … More / 共生体 / トランスクリプトーム解析 / 遠隔長期間観察 / 一斉産卵 / ミドリイシ属サンゴ / 幼生加入 / 受精効率 / フェノロジー / ミドリイシ Less

Development of coral spawning monitoring device using mobile communications network
- Principal Investigator
  
  Suzuki Go
- Project Period (FY)
  2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 40030:Aquatic bioproduction science-related
- Research Institution
  Fisheries Research and Education Agency
共生宿主細胞を用いたサンゴ-褐虫藻共生系のモデル確立と分子機構の解明Principal Investigator
- Principal Investigator
  
  善岡祐輝
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for JSPS Fellows
- Review Section
  
  Basic Section 45040:Ecology and environment-related
- Research Institution
  Okinawa Institute of Science and Technology Graduate University
共生が必要・不要な近縁種から探る共生における物質の役割
- Principal Investigator
  
  山下洋
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (B)
- Review Section
  
  Transformative Research Areas, Section (II)
- Research Institution
  Fisheries Research and Education Agency
比較ゲノムによるサンゴ共生系を生み出すゲノム基盤の解明Principal Investigator
- Principal Investigator
  
  善岡祐輝
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for JSPS Fellows
- Review Section
  
  Basic Section 43050:Genome biology-related
- Research Institution
  The University of Tokyo

All 2025 2024 2023 2022 2021 2020

All Journal Article Presentation

[Journal Article] Extensive mitochondrial genomic analyses reveal dynamic gene order rearrangements in the class Octocorallia (Cnidaria: Anthozoa)2025
- Author(s)
  Yoshioka Yuki、Kanai Megumi、Gishitomi Shogo、Arakaki Nana、Koido Tatsuki、Shinzato Chuya、Inoue Jun、Nagata Tomofumi、Satoh Noriyuki
- Journal Title
  
  Gene Reports
  
  Volume: 38 Pages: 102111-102111
- DOI
  10.1016/j.genrep.2024.102111
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21H04922, KAKENHI-PROJECT-23KJ2129
[Journal Article] Complete mitochondrial genomes of Palauastrea ramosa Yabe & Sugiyama, 1941 and Stylocoeniella guentheri (Bassett-Smith, 1890) reveal their molecular phylogenetic position2025
- Author(s)
 Yoshioka Yuki, Kanai Megumi, Tsuhako Takeru, Satoh Noriyuki, Nagata Tomofumi
- Journal Title
 
 Galaxea, Journal of Coral Reef Studies
 
 Volume: 27 Issue: 1 Pages: 7-12
- DOI
 10.3755/galaxea.G27-4
- ISSN
 1883-0838, 1883-3969
- Language
 English
- Peer Reviewed / Open Access
- Data Source
 KAKENHI-PROJECT-23KJ2129
[Journal Article] Molecular phylogenetic position of the family Fungiidae (Cnidaria: Anthozoa) based on complete mitochondrial genome sequences2024
- Author(s)
  Yoshioka Yuki, Nagata Fumihiko, Nonaka Masanori, Satoh Noriyuki
- Journal Title
  
  Galaxea, Journal of Coral Reef Studies
  
  Volume: 26 Issue: 1 Pages: 43-47
- DOI
  10.3755/galaxea.G26N-7
- ISSN
  1883-0838, 1883-3969
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23KJ2129
[Journal Article] Azooxanthellate Palythoa (Cnidaria: Anthozoa) Genomes Reveal Toxin-related Gene Clusters and Loss of Neuronal Genes in Hexacorals2024
- Author(s)
 Yoshioka Yuki、Yamashita Hiroshi、Uchida Taiga、Shinzato Chuya、Kawamitsu Mayumi、Fourreau Chloe Julie Lois、Castello Guillermo Mironenko、Fiedler Britta Katharina、van den Eeckhout Timotheus Maximilian、Borghi Stefano、Reimer James Davis、Shoguchi Eiichi
- Journal Title
 
 Genome Biology and Evolution
 
 Volume: 16 Issue: 9 Pages: 1-10
- DOI
 10.1093/gbe/evae197
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
 KAKENHI-PROJECT-21H04922, KAKENHI-PLANNED-23H03822, KAKENHI-PROJECT-24K01847, KAKENHI-PROJECT-23KJ2129
[Journal Article] Genomic Data Reveal Diverse Biological Characteristics of Scleractinian Corals and Promote Effective Coral Reef Conservation2024
- Author(s)
  Shinzato Chuya、Yoshioka Yuki
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 16 Issue: 2 Pages: 1-8
- DOI
  10.1093/gbe/evae014
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23KJ2129, KAKENHI-PROJECT-20K21860, KAKENHI-PROJECT-20H03235, KAKENHI-PROJECT-21H04922
[Journal Article] Genes possibly related to symbiosis in early life stages of Acropora tenuis inoculated with Symbiodinium microadriaticum2023
- Author(s)
  Yoshioka Yuki、Chiu Yi-Ling、Uchida Taiga、Yamashita Hiroshi、Suzuki Go、Shinzato Chuya
- Journal Title
  
  Communications Biology
  
  Volume: 6 Issue: 1 Pages: 1-11
- DOI
  10.1038/s42003-023-05350-8
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23KJ2129, KAKENHI-PROJECT-20K21860, KAKENHI-PROJECT-20H03235, KAKENHI-PROJECT-21H04742, KAKENHI-PROJECT-23K20289
[Journal Article] Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora2022
- Author(s)
  Yoshioka Yuki、Suzuki Go、Zayasu Yuna、Yamashita Hiroshi、Shinzato Chuya
- Journal Title
  
  BMC Ecology and Evolution
  
  Volume: 22 Issue: 1 Pages: 71-71
- DOI
  10.1186/s12862-022-02023-8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K21860, KAKENHI-PROJECT-19K15902, KAKENHI-PROJECT-20J21301, KAKENHI-PROJECT-21H04742, KAKENHI-PROJECT-23K20289, KAKENHI-PROJECT-20H03235
[Journal Article] Larval transcriptomic responses of a stony coral, Acropora tenuis, during initial contact with the native symbiont, Symbiodinium microadriaticum2022
- Author(s)
  Yoshioka Yuki、Yamashita Hiroshi、Suzuki Go、Shinzato Chuya
- Journal Title
  
  Scientific Reports
  
  Volume: 12 Issue: 1 Pages: 2854-2854
- DOI
  10.1038/s41598-022-06822-3
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21H04742, KAKENHI-PROJECT-20J21301, KAKENHI-PROJECT-20H03235, KAKENHI-PROJECT-23K20289
[Journal Article] Whole-Genome Transcriptome Analyses of Native Symbionts Reveal Host Coral Genomic Novelties for Establishing Coral?Algae Symbioses2020
- Author(s)
  Yoshioka Yuki、Yamashita Hiroshi、Suzuki Go、Zayasu Yuna、Tada Ipputa、Kanda Miyuki、Satoh Noriyuki、Shoguchi Eiichi、Shinzato Chuya
- Journal Title
  
  Genome Biology and Evolution
  
  Volume: 13 Issue: 1 Pages: 1-18
- DOI
  10.1093/gbe/evaa240
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18H02270, KAKENHI-PROJECT-20J21301, KAKENHI-PROJECT-17K07949, KAKENHI-PROJECT-20H03235, KAKENHI-PROJECT-17KT0027
[Presentation] 沖縄美ら海水族館で長期飼育中のクサビライシ科4種のミトコンドリアゲノム2024
- Author(s)
  善岡祐輝、永田史彦、野中正法、佐藤矩行
- Organizer
  第27回日本サンゴ礁学会大会
- Data Source
  KAKENHI-PROJECT-23KJ2129
[Presentation] スマートフォンの携帯通信網を利用したミドリイシ属サンゴの産卵観測装置の開発2024
- Author(s)
  鈴木豪，田代郷国, 善岡祐輝, 新里宙也, 酒井一彦
- Organizer
  日本サンゴ礁学会第27回大会
- Data Source
  KAKENHI-PROJECT-23K20289
[Presentation] Dynamic gene rearrangements of mitochondrial genome in the Subclass Octocorallia (Cnidaria: Anthozoa)2024
- Author(s)
  善岡祐輝、金井恵、宜志富紹吾、新垣奈々、古井戸樹、新里宙也、井上潤、長田智史、佐藤矩行
- Organizer
  第26回日本進化学会
- Data Source
  KAKENHI-PROJECT-23KJ2129
[Presentation] 洞窟に生息する無藻性イワスナギンチャク属の進化と生態2024
- Author(s)
  James D. Reimer, 高橋海里, Timotheus M, van den Eeckhou, Chloe JL Fourreau, 水上伊織, Joseph Proietti, Guillermo Mironenko Castello, 恒松雄太, 成瀬貫, 善岡祐輝, 將口栄一, Julia Vilaca, 喜瀬浩輝, 酒井隆一, 山下洋
- Organizer
  日本動物学会第95回長崎大会
- Data Source
  KAKENHI-PLANNED-23H03822
[Presentation] ウスエダミドリイシの初期生活期における共生関連遺伝子2023
- Author(s)
  善岡祐輝、Yi-Ling Chiu、内田大賀、山下洋、鈴木豪、新里宙也
- Organizer
  第26回日本サンゴ礁学会大会
- Data Source
  KAKENHI-PROJECT-23KJ2129
[Presentation] 共生開始時におけるウスエダミドリイシの異なる褐虫藻株に対する遺伝子発現応答の網羅的比較2022
- Author(s)
  善岡祐輝、山下洋、鈴木豪、新里宙也
- Organizer
  日本サンゴ礁学会
- Data Source
  KAKENHI-PROJECT-20J21301
[Presentation] サンゴ-褐虫藻共生系の分子機構：異なる褐虫藻に対する宿主の遺伝子応答から探る2022
- Author(s)
  善岡祐輝、新里宙也
- Organizer
  日本共生生物学会
- Data Source
  KAKENHI-PROJECT-20J21301
[Presentation] 系統特異的遺伝子群が駆動するコモンサンゴの進化2021
- Author(s)
  善岡祐輝、鈴木豪、山下洋、座安佑奈、新里宙也
- Organizer
  日本サンゴ礁学会大会
- Data Source
  KAKENHI-PROJECT-20J21301
[Presentation] 高精度な比較ゲノムを可能とするミドリイシ科サンゴからの遺伝子モデル構築2020
- Author(s)
  善岡祐輝、山下洋、鈴木豪、新里宙也
- Organizer
  日本サンゴ礁学会
- Data Source
  KAKENHI-PROJECT-20J21301

1. 新里宙也 (70524726)

# of Collaborated Projects: 2 results

# of Collaborated Products: 6 results
2. Suzuki Go (30533319)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
3. 竹垣草世香 (30546106)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 酒井一彦 (50153838)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
5. 山下洋 (00583147)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
6. 將口栄一 (90378563)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
7. 井上潤

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Yoshioka Yuki 善岡 祐輝

善岡 祐輝 ヨシオカ ユウキ

Research Projects

Research Products

Co-Researchers

Development of coral spawning monitoring device using mobile communications network

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

共生宿主細胞を用いたサンゴ-褐虫藻共生系のモデル確立と分子機構の解明Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

共生が必要・不要な近縁種から探る共生における物質の役割

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

比較ゲノムによるサンゴ共生系を生み出すゲノム基盤の解明Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Extensive mitochondrial genomic analyses reveal dynamic gene order rearrangements in the class Octocorallia (Cnidaria: Anthozoa)2025

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Complete mitochondrial genomes of <i>Palauastrea ramosa</i> Yabe &amp; Sugiyama, 1941 and <i>Stylocoeniella guentheri</i> (Bassett-Smith, 1890) reveal their molecular phylogenetic position2025

Author(s)

Journal Title

DOI

ISSN

Language

Data Source

[Journal Article] Molecular phylogenetic position of the family Fungiidae (Cnidaria: Anthozoa) based on complete mitochondrial genome sequences2024

Author(s)

Journal Title

DOI

ISSN

Language

Data Source

[Journal Article] Azooxanthellate <i>Palythoa</i> (Cnidaria: Anthozoa) Genomes Reveal Toxin-related Gene Clusters and Loss of Neuronal Genes in Hexacorals2024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Genomic Data Reveal Diverse Biological Characteristics of Scleractinian Corals and Promote Effective Coral Reef Conservation2024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Genes possibly related to symbiosis in early life stages of Acropora tenuis inoculated with Symbiodinium microadriaticum2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Larval transcriptomic responses of a stony coral, Acropora tenuis, during initial contact with the native symbiont, Symbiodinium microadriaticum2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Whole-Genome Transcriptome Analyses of Native Symbionts Reveal Host Coral Genomic Novelties for Establishing Coral?Algae Symbioses2020

Author(s)

Journal Title

DOI

Data Source

[Presentation] 沖縄美ら海水族館で長期飼育中のクサビライシ科4種のミトコンドリアゲノム2024

Author(s)

Yoshioka Yuki 善岡祐輝

善岡祐輝ヨシオカユウキ

[Journal Article] Complete mitochondrial genomes of <i>Palauastrea ramosa</i> Yabe & Sugiyama, 1941 and <i>Stylocoeniella guentheri</i> (Bassett-Smith, 1890) reveal their molecular phylogenetic position2025