Kosugi Shunichi 小杉俊一

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KOSUGI Shunichi 小杉俊一

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Researcher Number	30365457
Affiliation (Current)	2024: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任准教授 2024: 地方独立行政法人静岡県立病院機構静岡県立総合病院(救急診療部、循環器病診療部、がん診療部、臨床診療部, リサーチサポートセンター, 研究員
Affiliation (based on the past Project Information) *help	2023: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任准教授 2021 – 2022: 地方独立行政法人静岡県立病院機構静岡県立総合病院(救急診療部、循環器病診療部、がん診療部、臨床診療部, リサーチサポートセンター, 研究員 2018 – 2020: 国立研究開発法人理化学研究所, 生命医科学研究センター, 研究員 2015 – 2017: 国立研究開発法人理化学研究所, 統合生命医科学研究センター, 研究員 2014: 公益財団法人かずさDNA研究所, 技術開発研究部, プロジェクト研究員 2011 – 2013: 公益財団法人かずさＤＮＡ研究所, 植物ゲノム研究部, プロジェクト研究員 2010: 財団法人岩生物工学研究センター, 生命科学研究部, 契約研究員
Review Section/Research Field	Principal Investigator System genome science / Basic Section 43050:Genome biology-related / System genome science
Keywords	Principal Investigator ゲノム / 全ゲノムシークエンシング / 構造変異 / ゲノムシークエンシング / ヒトゲノム / unmapped read / アンマップ / 挿入 / chromium / PacBio … More / structurally variation / long read / sv / structural variation / タンデムリピート / ロングリード / ギャップ修復 / パイプライン / ミスアセンブリ / 第３世代シークエンシング / 次世代シークエンシング / ヘテロ接合 / アセンブリ / 予測 / モチーフ / 核外移行シグナル / 核移行シグナル / 解析技術 / バイオインフォマティクス / プロテオーム Less

ヒト全ゲノムシークエンシングデータを用いた非ヒト由来挿入の包括的同定Principal Investigator
- Principal Investigator
  
  小杉俊一
- Project Period (FY)
  2021 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 43050:Genome biology-related
- Research Institution
  大学共同利用機関法人情報・システム研究機構(機構本部施設等)
  Shizuoka Prefectural Hospital Organization
Method for efficiently detect structural variations with long read sequencing dataPrincipal Investigator
- Principal Investigator
  
  Kosugi Shunichi
- Project Period (FY)
  2017 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  System genome science
- Research Institution
  Shizuoka Prefectural Hospital Organization
  Institute of Physical and Chemical Research
Development of system to improve the quality of draft assembliesPrincipal Investigator
- Principal Investigator
  
  Kosugi Shunichi
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  System genome science
- Research Institution
  Institute of Physical and Chemical Research
  Kazusa DNA Research Institute
Development of computational system to accurately predict nuclear localization signals and nuclear export signals in proteinsPrincipal Investigator
- Principal Investigator
  
  KOSUGI Shunichi
- Project Period (FY)
  2010 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  System genome science
- Research Institution
  Kazusa DNA Research Institute
  Iwate Biotechnology Research Center

All 2024 2023 2021 2020 2019 2017 2016 2015 2014 2013 2012 2010

All Journal Article Presentation

[Journal Article] Comparative evaluation of SNVs, indels, and structural variations detected with short- and long-read sequencing data.2024
- Author(s)
  1.Shunichi Kosugi and Chikashi Terao
- Journal Title
  
  Human Genome Variation
  
  Volume: 11 Issue: 1 Pages: 18-18
- DOI
  10.1038/s41439-024-00276-x
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K06130
[Journal Article] Decoding triancestral origins, archaic introgression, and natural selection in the Japanese population by whole-genome sequencing.2024
- Author(s)
  1.Xiaoxi Liu, Satoshi Koyama, Kohei Tomizuka, Sadaaki Takata Yuki Ishikawa, Shuji Ito, Shunichi Kosugi, Kunihiko Suzuki, Keiko Hikino, Masaru Koido, Yoshinao Koike, Momoko Horikoshi, Takashi Gakuhari, Shiro Ikegawa, Kochi Matsuda, Yukihide Momozawa, Kaoru Ito, Yoichiro Kamatani, and Chikashi Terao
- Journal Title
  
  Science Advances
  
  Volume: 10 Issue: 16
- DOI
  10.1126/sciadv.adi8419
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K06130, KAKENHI-PROJECT-20H00462
[Journal Article] Detection of trait-associated structural variations using short read sequencing.2023
- Author(s)
  1.Shunichi Kosugi, Yoichiro Kamatani, Katsutoshi Harada, Kohei Tomizuka, Yukihide Momozawa, Takayuki Morisaki, The Biobank Japan Project, and Chikashi Terao
- Journal Title
  
  Cell Genomics
  
  Volume: in press
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K07264
[Journal Article] Variant Spectrum of von Hippel-Lindau (VHL) disease and its genomic heterogeneity in Japan.2023
- Author(s)
  1.Kenji Tamura, Yuki Kanazashi, Chiaki Kawada, Yuya Sekine, Kazuhiro Maejima, Shingo Ashida, Takashi Karashima, Shohei Kojima, Nickolas F Parrish, Shunichi Kosugi, Chikashi Terao, Shota Sasagawa, Masashi Fujita, Todd A Johnson, Yukihide Momozawa, Keiji Inoue, Taro Shuin, Hidewaki Nakagawa
- Journal Title
  
  Human Molecular Genetics
  
  Volume: Published online 11 March Issue: 12 Pages: 2046-2054
- DOI
  10.1093/hmg/ddad039
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K06130, KAKENHI-PROJECT-22K15385, KAKENHI-PROJECT-17K07264
[Journal Article] Detection of trait-associated structural variations using short read sequencing.2023
- Author(s)
  Shunichi Kosugi, Yoichiro Kamatani, Katsutoshi Harada, Kohei Tomizuka, Yukihide Momozawa, Takayuki Morisaki, The Biobank Japan Project, and Chikashi Terao
- Journal Title
  
  Cell Genomics
  
  Volume: 3 Issue: 6 Pages: 100328-100328
- DOI
  10.1016/j.xgen.2023.100328
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K06130, KAKENHI-PROJECT-19K08535, KAKENHI-PROJECT-20H00462
[Journal Article] Genome features of common vetch (Vicia sativa) in natural habitats.2021
- Author(s)
  Kenta Shirasawa, Shunichi Kosugi, Kazuhiro Sasaki, Andrea Ghelfi, Koei Okazaki, Atsushi Toyoda, Hideki Hirakawa, Sachiko Isobe
- Journal Title
  
  Plant Direct
  
  Volume: 5 Issue: 10
- DOI
  10.1002/pld3.352
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07264, KAKENHI-PROJECT-21K06130, KAKENHI-PROJECT-16H06279
[Journal Article] Whole genome sequencing of 45 Japanese patients with intellectual disability.2021
- Author(s)
  Chihiro Abe-Hatano, Aritoshi Iida, Shunichi Kosugi, Yukihide Momozawa, Chikashi Terao, Keiko Ishikawa, Mariko Okubo, Yasuo Hachiya, Hiroya Nishida, Kazuyuki Nakamura, Rie Miyata, Chie Murakami, Kan Takahashi, Kyoko Hoshino, Haruko Sakamoto, Sayaka Ohta, Masaya Kubota, Eri Takeshita, Akihiko Ishiyama et al.
- Journal Title
  
  American Journal of Medical Genetics - Part A
  
  Volume: 185 Issue: 5 Pages: 1468-1480
- DOI
  10.1002/ajmg.a.62138
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K07264, KAKENHI-PROJECT-21K06130, KAKENHI-PROJECT-21H02886
[Journal Article] Endogenization and excision of human herpesvirus 6 in human genomes.2020
- Author(s)
  Xiaoxi Liu, Shunichi Kosugi, Rie Koide, Yoshiki Kawamura, Jumpei Ito, Hiroki Miura, Nana Matoba, Motomichi Matsuzaki , and other 14 authors
- Journal Title
  
  PLOS Genetics
  
  Volume: 16 Issue: 8 Pages: 1008915-1008915
- DOI
  10.1371/journal.pgen.1008915
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07264, KAKENHI-PROJECT-20K15767, KAKENHI-PUBLICLY-19H04826, KAKENHI-PROJECT-16H02676, KAKENHI-PROJECT-18H02662, KAKENHI-PROJECT-19J01713, KAKENHI-PROJECT-19K23874
[Journal Article] Prevalence and spectrum of pathogenic germline variants in Japanese patients with early-onset colorectal, breast, and prostate cancer.2020
- Author(s)
  Xiaoxi Liu, Sadaaki Takata, Kyota Ashikawa, Tomomi Aoi, Shunichi Kosugi, Chikashi Terao, Nicholas F. Parrish, Koichi Matsuda, Hidewaki Nakagawa, Yoichiro Kamatani, Michiaki Kubo, and Yukihide Momozawa
- Journal Title
  
  JCO Clinical Oncology
  
  Volume: 4 Issue: 4 Pages: 183-191
- DOI
  10.1200/po.19.00224
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K07264
[Journal Article] tappAS: a comprehensive computational framework for the analysis of the functional impact of differential splicing.2020
- Author(s)
  Lorena de la Fuente, Angeles Arzalluz-Luque, Manuel Tardaguila, Hector del Risco, Cristina Marti, Sonia Tarazona, Pedro Salguero, Raymond Scott, Alberto Lerma, Ana Alastrue-Agudo, Pablo Bonilla, Jeremy R.B. Newman, Shunichi Kosugi, Lauren M. McIntyre, Victoria Moreno-Manzano, and Ana Conesa
- Journal Title
  
  Genome Biology
  
  Volume: 21 Issue: 1 Pages: 119-119
- DOI
  10.1186/s13059-020-02028-w
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07264
[Journal Article] A novel intragenic deletion in OPHN1 in a Japanese patient with Dandy-Walker malformation.2019
- Author(s)
  Iida A, Takeshita E, Kosugi S, Kamatani Y, Momozawa Y, Kubo M, Nakagawa E, Kurosawa K, Inoue K, Goto YI
- Journal Title
  
  Human Genome Variation
  
  Volume: 6 Issue: 1 Pages: 1-4
- DOI
  10.1038/s41439-018-0032-8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K07264, KAKENHI-PROJECT-16H05361
[Journal Article] Comprehensive evaluation of structural variation detection algorithms for whole genome sequencing.2019
- Author(s)
  3.Shunichi Kosugi, Yukihide Momozawa, Xiaoxi Liu, Chikashi Terao, Michiaki Kubo, and Yoichiro Kamatani
- Journal Title
  
  Genome Biology
  
  Volume: 20 Issue: 1 Pages: 117-117
- DOI
  10.1186/s13059-019-1720-5
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K07264
[Journal Article] A novel PAK3 pathogenic variant identified in two siblings from a Japanese family with X-linked intellectual disability: case report and review of the literature.2019
- Author(s)
  4.Aritoshi Iida, Kyoko Takano, Eri Takeshita, Chihiro Abe Hatano, Shinichi Hirabayashi, Yuji Inaba, Shunichi Kosugi, Yoichiro Kamatani, Yukihide Momozawa, Michiaki Kubo, Eiji Nakagawa, Ken Inoue, and Yu-ichi Goto
- Journal Title
  
  Cold Spring Harb. Mol. Case Stud.
  
  Volume: 5 Issue: 6 Pages: a003988-a003988
- DOI
  10.1101/mcs.a003988
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K07264
[Journal Article] Rice breeding based on whole genome sequencing using next-generation sequencer2016
- Author(s)
  Akira Abe, Hiroki Takagi, Satoshi Natsume, Hiroki Yaegashi, Hideko Kikuchi, Kentaro Yoshida, Shunichi Kosugi, Hiromasa Saitoh, Naoya Urasaki, Hideo Matsumura, Hiroyuki Kanzaki, and Ryohei Terauchi
- Journal Title
  
  生化学
  
  Volume: 88 Issue: 1 Pages: 44-53
- DOI
  10.14952/SEIKAGAKU.2016.880044
- ISSN
  0037-1017
- Year and Date
  2016-02-25
- Language
  Japanese
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-26430200, KAKENHI-PROJECT-26712002
[Journal Article] Sequencing and comparative analyses of the genomes of zoysiagrasses2016
- Author(s)
  Tanaka H, Hirakawa H, Kosugi S, Nakayama S, Ono A, Watanabe A, Hashiguchi M, Gondo T, Ishigaki G, Muguerza M, Shimizu K, Sawamura N, Inoue T, Shigeki Y, Ohno N, Tabata S, Akashi R, Sato S
- Journal Title
  
  DNA Research
  
  Volume: 23 Issue: 2 Pages: 171-180
- DOI
  10.1093/dnares/dsw006
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-26430200
[Journal Article] 次世代シークエンサーを活用した全ゲノム解析によるイネ育種2016
- Author(s)
  阿部陽，高木宏樹，夏目俊，八重樫弘樹，菊池秀子，吉田健太郎，小杉俊一，齋藤宏昌，浦崎直也，松村英生，神崎洋之，寺内良平
- Journal Title
  
  生化学
  
  Volume: 88 Pages: 44-53
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-26430200
[Journal Article] Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements2016
- Author(s)
  Yoshida K, Saunders DG, Mitsuoka C, Natsume S, Kosugi S, Saitoh H, Inoue Y, Chuma I, Tosa Y, Cano LM, Kamoun S, Terauchi R
- Journal Title
  
  BMC Genomics
  
  Volume: 17 Issue: 1 Pages: 370-370
- DOI
  10.1186/s12864-016-2690-6
- NAID
  120005817905
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26430200
[Journal Article] GMcloser: closing gaps in assemblies accurately with a likelihood-based selection of contig or long-read alignments.2015
- Author(s)
  Shunichi Kosugi, Hideki Hirakawa, and Satoshi Tabata
- Journal Title
  
  Bioinformatics
  
  Volume: 31 Issue: 23 Pages: 3133-3141
- DOI
  10.1093/bioinformatics/btv465
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26430200, KAKENHI-PROJECT-221S0002
[Journal Article] MutMap accelerates breeding of a salt-tolerant rice cultivar2015
- Author(s)
  Takagi, H., Tamiru, M., Abe, A., Yoshida, K., Uemura, A., Yaegashi, H., Obara, T., Oikawa, K., Utsushi, H., Kanzaki, E., Mitsuoka, C., Natsume, S., Kosugi, S., Kanzaki, H., Matsumura, H., Urasaki, N., Kamoun, S., Terauchi, R.
- Journal Title
  
  Nature Biotechnology
  
  Volume: 33 Issue: 5 Pages: 445-449
- DOI
  10.1038/nbt.3188
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PLANNED-23113009, KAKENHI-PROJECT-24248004, KAKENHI-PROJECT-26292027, KAKENHI-PROJECT-26430200
[Journal Article] A genetic mechanism for female-limited Batesian mimicry in Papilio butterfly2015
- Author(s)
  H. Nishikawa, T Iijima, R Kajitani, et. al.
- Journal Title
  
  Nature Genetics
  
  Volume: 47 Issue: 4 Pages: 405-409
- DOI
  10.1038/ng.3241
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-22125008, KAKENHI-PROJECT-24370066, KAKENHI-PROJECT-24380030, KAKENHI-PROJECT-26430200, KAKENHI-PROJECT-221S0002, KAKENHI-PLANNED-22128005, KAKENHI-PROJECT-24370001, KAKENHI-PROJECT-15H05778
[Journal Article] NESmapper: accurate prediction of leucine-rich nuclear export signals using activity-based profiles2014
- Author(s)
  Shunichi Kosugi, Hiroshi Yanagawa, Ryohei Terauchi, Satoshi Tabata
- Journal Title
  
  Plos Computational Biology
  
  Volume: 18 Issue: 9 Pages: e1003841-e1003841
- DOI
  10.1371/journal.pcbi.1003841
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26430200
[Journal Article] Sequence Analysis of the Genome of Carnation (Dianthus caryophyllus L.)2013
- Author(s)
  Masafumi Yagi, Shunichi Kosugi, Hideki Hirakawa et al.(他24名)
- Journal Title
  
  DNA Research
  
  Volume: (Epub ahead of print) Issue: 3 Pages: 231-241
- DOI
  10.1093/dnares/dst053
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22510217, KAKENHI-PROJECT-23370016, KAKENHI-PROJECT-24780038, KAKENHI-PROJECT-221S0002
[Journal Article]2013
- Author(s)
  Shunichi Kosugi, Satoshi Natsume, Kentaro Yoshida, Daniel MacLean, Liliana Cano, Sophien Kamoun, and Ryohei Terauchi
- Journal Title
  
  PLoS One
  
  Volume: 8 Issue: 10 Pages: e75402-e75402
- DOI
  10.1371/journal.pone.0075402
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22510217, KAKENHI-PROJECT-22780040, KAKENHI-PLANNED-23113009
[Journal Article] Genome sequencing reveals agronomically important loci in rice using MutMap2013
- Author(s)
  Abe Akira, Kosugi Shunichi, Yoshida Kentaro, Natsume Satoshi, Takagi Hiroki, Kanzaki Hiroyuki, Matsumura Hideo, (他 7 名 , 7 番目)
- Journal Title
  
  Nature Biotechnology
  
  Volume: 30 Issue: 2 Pages: 174-178
- DOI
  10.1038/nbt.2095
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22380009, KAKENHI-PROJECT-22510217, KAKENHI-PLANNED-23113009, KAKENHI-PROJECT-23580065
[Journal Article]2013
- Author(s)
  Hiroki Takagi, Akira Abe, Kentaro Yoshida, Shunichi Kosugi, Satoshi Natsume, Chikako Mitsuoka, Aiko Uemura, Hiroe Utsushi, Muluneh Tamiru, Shohei Takuno, Hideki Innan, Liliana M. Cano, Sophien Kamoun, and Ryohei Terauchi
- Journal Title
  
  Plant Journal
  
  Volume: 74 Issue: 12 Pages: 174-183
- DOI
  10.1371/journal.pone.0083720
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22510217
[Journal Article] MutMap+ : Genetic mapping and mutant identification without crossing in rice2013
- Author(s)
  Fekih, R., Takagi, H., Tamiru, M., Abe, A., Natsume, S., et al.
- Journal Title
  
  PLoS One
  
  Volume: 8 Issue: 7 Pages: e68529-e68529
- DOI
  10.1371/journal.pone.0068529
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-12F02212, KAKENHI-PROJECT-22510217, KAKENHI-PLANNED-23113009, KAKENHI-PROJECT-23580065, KAKENHI-PROJECT-24248004
[Journal Article] Nuclear localization signal in a cancer-related transcriptional regulator protein NAC1.2012
- Author(s)
  Okazaki K, Nakayama N, Nariai Y, Kato H, Nakayama K, Miyazaki K, Maruyama R, Kosugi S, Urano T, Sakashita G.
- Journal Title
  
  Carcinogenesis.
  
  Volume: 10 Issue: 10 Pages: 1854-1862
- DOI
  10.1093/carcin/bgs193
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21791557, KAKENHI-PROJECT-22510217, KAKENHI-PROJECT-24592518, KAKENHI-PROJECT-24710229
[Journal Article] タンパク質モチーフ活性の予測とシグナル伝達解析2010
- Author(s)
  小杉俊一、柳川弘志
- Journal Title
  
  生化学
  
  Volume: 82 Pages: 37-40
- NAID
  10026607748
- URL
  http://www.jbsoc.or.jp/back_no/82-7
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22510217
[Presentation] Comprehensive evaluation of structural variation detection algorithms for whole genome sequencing2019
- Author(s)
  Shunichi Kosugi
- Organizer
  第８回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-17K07264
[Presentation] Structural variations in whole genome sequencing data from 1300 disease genomes2017
- Author(s)
  小杉俊一、桃沢幸秀、久保允人、鎌谷洋一郎
- Organizer
  第6回生命医薬情報連合大会
- Data Source
  KAKENHI-PROJECT-17K07264
[Presentation] Structural variations in whole genome sequencing data from 1300 disease genomes2017
- Author(s)
  小杉俊一、桃沢幸秀、久保允人、鎌谷洋一郎
- Organizer
  第6回生命医薬情報連合大会
- Data Source
  KAKENHI-PROJECT-26430200
[Presentation] Comprehensive evaluation of strucutral variation calling tools and development of an integrated pipeline for merging calling results2016
- Author(s)
  Shunichi Kosugi, Yoichiro Kamatani
- Organizer
  第5回生命医薬情報連合大会
- Place of Presentation
  東京お台場
- Year and Date
  2016-09-29
- Data Source
  KAKENHI-PROJECT-26430200
[Presentation] ハイライトトラックセッション: Coval: Improving alignment quality and variant calling accuracy for next-generation sequencing2013
- Author(s)
  小杉俊一
- Organizer
  日本バイオインフォマティクス学会2013年年会
- Place of Presentation
  タワーホール船堀
- Data Source
  KAKENHI-PROJECT-22510217
[Presentation] ゲノムアセンブリのギャップを高精度で埋めるツールGMcloserの開発2013
- Author(s)
  小杉俊一、平川英樹、田畑哲之
- Organizer
  NGS現場の会第3回研究会
- Place of Presentation
  神戸国際会議場
- Data Source
  KAKENHI-PROJECT-22510217
[Presentation] Coval : Improving alignment quality and variant calling accuracy for next-generation sequencing data2013
- Author(s)
  小杉俊一
- Organizer
  日本バイオインフォマティクス学会2013年年会
- Place of Presentation
  タワーホール船堀
- Data Source
  KAKENHI-PROJECT-22510217
[Presentation] 次世代シークエンサーを用いたイネ全ゲノム変異解析2010
- Author(s)
  小杉俊一
- Organizer
  第119回日本育種学会講演会
- Place of Presentation
  講演会要旨に記述(震災の影響により大会中止)
- Data Source
  KAKENHI-PROJECT-22510217

1. YOSHIDA Kentaro

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# of Collaborated Products: 1 results
2. MATSUMURA Hideo

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
3. 寺内良平

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
4. 中山健太郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Kosugi Shunichi 小杉 俊一

KOSUGI Shunichi 小杉 俊一

Research Projects

Research Products

Co-Researchers

ヒト全ゲノムシークエンシングデータを用いた非ヒト由来挿入の包括的同定Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Method for efficiently detect structural variations with long read sequencing dataPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Development of system to improve the quality of draft assembliesPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Development of computational system to accurately predict nuclear localization signals and nuclear export signals in proteinsPrincipal Investigator

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Research Institution

[Journal Article] Comparative evaluation of SNVs, indels, and structural variations detected with short- and long-read sequencing data.2024

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[Journal Article] Decoding triancestral origins, archaic introgression, and natural selection in the Japanese population by whole-genome sequencing.2024

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[Journal Article] Detection of trait-associated structural variations using short read sequencing.2023

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[Journal Article] Variant Spectrum of von Hippel-Lindau (VHL) disease and its genomic heterogeneity in Japan.2023

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[Journal Article] Detection of trait-associated structural variations using short read sequencing.2023

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[Journal Article] Genome features of common vetch (Vicia sativa) in natural habitats.2021

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[Journal Article] Whole genome sequencing of 45 Japanese patients with intellectual disability.2021

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[Journal Article] Endogenization and excision of human herpesvirus 6 in human genomes.2020

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[Journal Article] Prevalence and spectrum of pathogenic germline variants in Japanese patients with early-onset colorectal, breast, and prostate cancer.2020

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[Journal Article] tappAS: a comprehensive computational framework for the analysis of the functional impact of differential splicing.2020

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[Journal Article] A novel intragenic deletion in OPHN1 in a Japanese patient with Dandy-Walker malformation.2019

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Kosugi Shunichi 小杉俊一

KOSUGI Shunichi 小杉俊一

[Journal Article] Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements2016