SENOO Shigeto 瀬尾茂人

… Alternative Names

SENO Shigeto 瀬尾茂人

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Researcher Number	30432462
Other IDs
Affiliation (Current)	2025: 大阪大学, 大学院情報科学研究科, 准教授
Affiliation (based on the past Project Information) *help	2021 – 2024: 大阪大学, 大学院情報科学研究科, 准教授 2017 – 2021: 大阪大学, 情報科学研究科, 准教授 2012 – 2016: 大阪大学, 情報科学研究科, 助教 2014: 大阪大学, 大学院情報科学研究科, 助教 2009: Osaka University, 大学院・情報科学研究科, 助教 … More 2007 – 2008: Osaka University, 情報科学研究科, 助教 2007: 阪大, 情報科学研究科, 助手 2006: 大阪大学, 情報科学研究科, 助手 Less
Review Section/Research Field	Principal Investigator Bioinformatics/Life informatics / Basic Section 62010:Life, health and medical informatics-related / Transformative Research Areas, Section (III) / Medium-sized Section 62:Applied informatics and related fields / Life / Health / Medical informatics Except Principal Investigator Medium-sized Section 59:Sports sciences, physical education, health sciences, and related fields / Medium-sized Section 62:Applied informatics and related fields / Life / Health / Medical informatics / Basic Section 50020:Tumor diagnostics and therapeutics-related / Transformative Research Areas, Section (III) / Basic Section 55010:General surgery and pediatric surgery-related / Medium-sized Section 38:Agricultural chemistry and related fields / System genome science
Keywords	Principal Investigator バイオインフォマティクス / バイオイメージインフォマティクス / 遺伝子発現解析 / 空間トランスクリプトーム / 機械学習 / 細胞画像処理 / 深層学習 / トランスクリプトーム解析 / 発現プロファイル / 類似構造探索 … More / オミクス解析 / 1細胞発現解析 / シングルセル解析 / データマイニング / 強化学習 / 褐色脂肪細胞 / 類似構造検索 / ゲノム / 生物情報学 / トランスクリプトーム / CAGE … More Except Principal Investigator バイオインフォマティクス / 遺伝子発現解析 / 生体イメージング / 骨格筋 / 褐色脂肪組織 / 1細胞トランスクリプトーム解析 / 細胞系譜解析 / 細胞系譜推定 / ベイジアンネットワーク / 脂肪細胞 / 細胞遊走 / 細胞追跡 / CRISPR / CRISPR-gRNA library / 疲弊T細胞 / メモリーT細胞 / CRISPR gRNA library / TCF-1 / CRISPR gRNA / 癌免疫療法 / CRISPR-Cas9 / 癌免疫 / CRISPRライブラリ / がん免疫療法 / T細胞 / 腫瘍免疫 / CRISPR Library / 進化ゲーム理論 / 社会的選択理論 / 細胞コミュニティ / 肥満 / Artificial Intelligence / 乳房温存手術 / 乳腺切除断端 / 生細胞 / アクロレイン / 術中迅速診断 / 乳癌 / 運動 / 1細胞RNAシーケンス / 1細胞RNAシーケンス解析 / 1細胞RNAシーケンシング解析 / 細胞アトラス / クラスタリング / 選択的スプライシング / フラボノイド / 食品化合物 / スプライシング / 次世代シーケンス解析 / ルテオリン / アピゲニン / 選択的mRNAスプライシング / 時系列データ解析 / トランスクリプトーム解析 / ネットワーク解析 / １細胞RNAシーケンシング / 1細胞RNAシーケンシング / 動的ベイジアンネットワークモデル / 遺伝子制御ネットワーク推定 / 炎症反応 / 免疫細胞 / 細胞動態 / 細胞イメージング解析 / セグメンテーション / イメージング解析 / 細胞イメージング / 大規模データ解析 / 褐色脂肪細胞 / 熱産生 / 細胞分化 / microRNA / 遺伝子ネットワーク / モデル化とシミュレーション / 細胞トラッキング / 蛍光イメージング / バイオイメージインフォマティクス / 数理モデル / 画像処理 / 細胞画像解析 Less

Establishment of intraoperative surgical margin assessment using human live tissue in breast conserving surgery
- Principal Investigator
  
  多根井智紀
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 55010:General surgery and pediatric surgery-related
- Research Institution
  Osaka University
時空間情報を統合した1細胞発現解析手法の開発Principal Investigator
- Principal Investigator
  
  瀬尾茂人
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  Osaka University
The study on the brown adipose tissue-derived novel factors which are related to the regulation of muscle regeneration
- Principal Investigator
  
  GOTO Tsuyoshi
- Project Period (FY)
  2022 – 2023
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 59:Sports sciences, physical education, health sciences, and related fields
- Research Institution
  Kyoto University
細胞動画像とオミクスデータの統合による細胞コミュニティの解析手法の開発Principal Investigator
- Principal Investigator
  
  瀬尾茂人
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (B)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Osaka University
骨イメージングではじめる動的多細胞コミュニティ学
- Principal Investigator
  
  菊田順一
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (B)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Kobe University
  Osaka University
網羅的遺伝子ノックアウト技術を活用した新規がんー免疫チェックポイント標的薬の創製
- Principal Investigator
  
  藤木文博
- Project Period (FY)
  2021 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 50020:Tumor diagnostics and therapeutics-related
- Research Institution
  Osaka University
Study on the Regulatory Mechanisms of the Function of Skeletal Muscle by Brown Adipose Tissue
- Principal Investigator
  
  Goto Tsuyoshi
- Project Period (FY)
  2020 – 2021
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 59:Sports sciences, physical education, health sciences, and related fields
- Research Institution
  Kyoto University
Molecular mechanism of alternative mRNA splicing regulation by active flavonoids and its application
- Principal Investigator
  
  Masuda Seiji
- Project Period (FY)
  2019 – 2020
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 38:Agricultural chemistry and related fields
- Research Institution
  Kyoto University
Development of multiple classification and comparison methods of cells based on information criteria and their applications to Cell Atlas
- Principal Investigator
  
  MATSUDA Hideo
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 62:Applied informatics and related fields
- Research Institution
  Osaka University
Development of integrated analysis technology for bioimaging and omics dataPrincipal Investigator
- Principal Investigator
  
  Seno Shigeto
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  Osaka University
Development of Automated Cellular Video Image Processing Technology Using Reinforcement Learning via Simulation and GANPrincipal Investigator
- Principal Investigator
  
  Seno Shigeto
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 62:Applied informatics and related fields
- Research Institution
  Osaka University
Development of cell diversity analysis method based on gene regulatory prediction by Bayesian network
- Principal Investigator
  
  MATSUDA Hideo
- Project Period (FY)
  2018 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 62:Applied informatics and related fields
- Research Institution
  Osaka University
Comprehensive and Systematic Analysis of Cell Migration Dynamics by Real-Time Bioimaging
- Principal Investigator
  
  MATSUDA Hideo
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Osaka University
Development of spatio-temporal analysis method for bioimaging dataPrincipal Investigator
- Principal Investigator
  
  Seno Shigeto
- Project Period (FY)
  2015 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Osaka University
Development of Systematic Analysis Method of Gene Network for Adipocyte Transdifferentiation
- Principal Investigator
  
  Matsuda Hideo
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Osaka University
Dynamic analysis for living cell environment by 4D imaging
- Principal Investigator
  
  MATSUDA Hideo
- Project Period (FY)
  2012 – 2014
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  System genome science
- Research Institution
  Osaka University
A method for gene regulatory network estimation based on high-throughput sequencer dataPrincipal Investigator
- Principal Investigator
  
  Seno Shigeto
- Project Period (FY)
  2012 – 2015
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Osaka University
A method for exhaustive similarity search of genomic positional expression.Principal Investigator
- Principal Investigator
  
  SENO Shigeto
- Project Period (FY)
  2007 – 2009
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Osaka University
発現構造を用いた比較トランスクリプトーム解析Principal Investigator
- Principal Investigator
  
  瀬尾茂人
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Young Scientists (Start-up)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Osaka University

[Journal Article] 動画像シミュレータを介した強化学習による細胞追跡手法2023
- Author(s)
  長村徹, 瀬尾茂人, 藤本健二, 繁田浩功, 松田秀雄
- Journal Title
  
  情報処理学会論文誌数理モデル化と応用
  
  Volume: 16 Pages: 11-22
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22H05085
[Journal Article] Cell Tracking via Reinforcement Learning with Microscopic Image Simulator2023
- Author(s)
  Nagamura Toru、Seno Shigeto、Shigeta Hironori、Mashita Tomohiro、Matsuda Hideo
- Journal Title
  
  Proceedings of the 2023 13th International Conference on Biomedical Engineering and Technology
  
  Volume: 23 Pages: 16-22
- DOI
  10.1145/3620679.3620682
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-22H05085
[Journal Article] A Novel Method for Gene Regulatory Network Inference with Pseudotime Data Using Information Criterion2022
- Author(s)
  Shuhei Yao, Kaito Uemura, Shigeto Seno, Hideo Matsuda
- Journal Title
  
  International Journal of Bioscience, Biochemistry and Bioinformatics
  
  Volume: 12
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18H04124
[Journal Article] SC-JNMF: single-cell clustering integrating multiple quantification methods based on joint non-negative matrix factorization2021
- Author(s)
  Shiga Mikio、Seno Shigeto、Onizuka Makoto、Matsuda Hideo
- Journal Title
  
  PeerJ
  
  Volume: 9 Pages: e12087-e12087
- DOI
  10.7717/peerj.12087
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19H04207
[Journal Article] Tracking and Analysis of FUCCI-Labeled Cells Based on Particle Filters and Time-to-Event Analysis.2020
- Author(s)
  Fujimoto, K., Seno, S., Shigeta, H., Mashita, T., Ishii, M., Matsuda, H.
- Journal Title
  
  Int J Biosci Biochem Bioinforma.
  
  Volume: 10 Issue: 2 Pages: 94-109
- DOI
  10.17706/ijbbb.2020.10.2.94-109
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-ORGANIZER-17H06391, KAKENHI-PROJECT-18K19842
[Journal Article] Long non-coding RNA 2310069B03Rik functions as a suppressor of Ucp1 expression under prolonged cold exposure in murine beige adipocytes2020
- Author(s)
  Mari Iwase, Shoko Sakai, Shigeto Seno, Yu-Sheng Yeh, Tony Kuo, Haruya Takahashi, Wataru Nomura, Huei-Fen Jheng, Paul Horton, Naoki Osato, Hideo Matsuda, Kazuo Inoue, Teruo Kawada, Tsuyoshi Goto
- Journal Title
  
  Bioscience, biotechnology, and biochemistry
  
  Volume: 84 Issue: 2 Pages: 305-313
- DOI
  10.1080/09168451.2019.1677451
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K00387, KAKENHI-PROJECT-18H04124, KAKENHI-PROJECT-19H02910
[Journal Article] SC-JNMF: Single-cell clustering integrating multiple quantification methods based on joint non-negative matrix factorization2020
- Author(s)
  Shiga Mikio、Seno Shigeto、Onizuka Makoto、Matsuda Hideo
- Journal Title
  
  bioRxiv
  
  Volume: -
- DOI
  10.1101/2020.09.30.319921
- Data Source
  KAKENHI-PROJECT-19H04207
[Journal Article] Food-Derived Compounds Apigenin and Luteolin Modulate mRNA Splicing of Introns with Weak Splice Sites2019
- Author(s)
  Kurata Masashi、Fujiwara Naoko、Fujita Ken-ichi、Yamanaka Yasutaka、Seno Shigeto、Kobayashi Hisato、Miyamae Yusaku、Takahashi Nobuyuki、Shibuya Yasuyuki、Masuda Seiji
- Journal Title
  
  iScience
  
  Volume: 22 Pages: 336-352
- DOI
  10.1016/j.isci.2019.11.033
- NAID
  120007132694
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K22280, KAKENHI-PROJECT-19K15807, KAKENHI-PROJECT-19H02884, KAKENHI-PROJECT-17K13264
[Journal Article] Improvement of detection performance of fusion genes from RNA-Seq data by clustering short reads2019
- Author(s)
  Yoshiaki Sota, Shigeto Seno, Hironori Shigeta, Naoki Osato, Masafumi Shimoda, Shinzaburo Noguchi, Hideo Matsuda
- Journal Title
  
  Journal of Bioinformatics and Computational Biology
  
  Volume: 印刷中
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18H04124
[Journal Article] 生体蛍光観察動画像の深度を考慮した深層学習による細胞追跡精度の改善2019
- Author(s)
  嶋田彩人 , 瀬尾茂人 , 繁田浩功 , 間下以大 , 内田穣 , 石井優 , 松田秀雄
- Journal Title
  
  情報処理学会論文誌数理モデル化と応用
  
  Volume: 12 Pages: 82-91
- NAID
  170000150463
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K19842
[Journal Article] Direct cell-cell contact between mature osteoblasts and osteoclasts dynamically controls their functions in vivo2018
- Author(s)
  Masayuki Furuya、Junichi Kikuta、Sayumi Fujimori、Shigeto Seno、et.al
- Journal Title
  
  Nature Communications
  
  Volume: 9 Issue: 1 Pages: 300-300
- DOI
  10.1038/s41467-017-02541-w
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K00403, KAKENHI-PROJECT-17K11005, KAKENHI-PROJECT-16K12525, KAKENHI-PROJECT-15H05671, KAKENHI-PROJECT-16H02619
[Journal Article] A Phytol-Enriched Diet Activates PPAR-α in the Liver and Brown Adipose Tissue to Ameliorate Obesity-Induced Metabolic Abnormalities2018
- Author(s)
  Ji-Yeong An 、Huei-Fen Jheng、Hiroyuki Nagai、Kohei Sanada、Haruya Takahashi、Mari Iwase、Natsumi Watanabe、Young-Il Kim、Aki Teraminami、Nobuyuki Takahashi、Rieko Nakata、Hiroyasu Inoue、Shigeto Seno、et.al
- Journal Title
  
  Molecular Nutrition & Food Research
  
  Volume: - Issue: 6 Pages: 1700688-1700688
- DOI
  10.1002/mnfr.201700688
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K00403, KAKENHI-PROJECT-26280106, KAKENHI-PROJECT-16K07734
[Journal Article] The dipeptidyl peptidase-4 (DPP-4) inhibitor teneligliptin enhances brown adipose tissue function, thereby preventing obesity in mice2018
- Author(s)
  Takeda Kenichiro、Sawazaki Honami、Takahashi Haruya、Yeh Yu-Sheng、Jheng Huei-Fen、Nomura Wataru、Ara Takeshi、Takahashi Nobuyuki、Seno Shigeto、Osato Naoki、Matsuda Hideo、Kawada Teruo、Goto Tsuyoshi
- Journal Title
  
  FEBS Open Bio
  
  Volume: 8 Issue: 11 Pages: 1782-1793
- DOI
  10.1002/2211-5463.12498
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16H02551, KAKENHI-PROJECT-15K00403, KAKENHI-PROJECT-16K12525
[Journal Article] Chromatin 3D reconstruction from chromosomal contacts using a genetic algorithm2018
- Author(s)
  Viacheslav Kapilevich, Shigeto Seno, Hideo Matsuda, Yoichi Takenaka
- Journal Title
  
  IEEE/ACM Transactions on Computational Biology and Bioinformatics
  
  Volume: - Issue: 5 Pages: 1-1
- DOI
  10.1109/tcbb.2018.2814995
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K00403, KAKENHI-PROJECT-15K00402
[Journal Article] The hepatokine FGF21 is crucial for peroxisome proliferator-activated receptor-α agonist-induced amelioration of metabolic disorders in obese mice2017
- Author(s)
  Tsuyoshi Goto、Mariko Hirata、Yumeko Aoki、Mari Iwase、Haruya Takahashi、Minji Kim、Yongjia Li、Huei-Fen Jheng、Wataru Nomura、Nobuyuki Takahashi、Chu-Sook Kim、Rina Yu、Shigeto Seno、et.al
- Journal Title
  
  The Journal of Biological Chemistry
  
  Volume: 292 Issue: 22 Pages: 9175-9190
- DOI
  10.1074/jbc.m116.767590
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K00403, KAKENHI-PROJECT-16K07734, KAKENHI-PROJECT-26280106
[Journal Article] Bone marrow cavity segmentation using graph-cuts with wavelet-based texture feature2017
- Author(s)
  Shigeta Hironori、Mashita Tomohiro、Junichi Kikuta、Shigeto Seno、et.al
- Journal Title
  
  Journal of Bioinformatics and Computational Biology
  
  Volume: 15 Issue: 05 Pages: 1740004-1740004
- DOI
  10.1142/s0219720017400042
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K00403, KAKENHI-PROJECT-16K12525
[Journal Article] Over-expression of PPARα in obese mice adipose tissue improves insulin sensitivity2017
- Author(s)
  Haruya Takahashi、Kohei Sanada、Hiroyuki Nagai、Yongjia Li、Yumeko Aoki、Takeshi Ara、Shigeto Seno、et.al
- Journal Title
  
  Biochemical and Biophysical Research Communications
  
  Volume: 493 Issue: 1 Pages: 108-114
- DOI
  10.1016/j.bbrc.2017.09.067
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K00403, KAKENHI-PROJECT-16K14927
[Journal Article] Diagnostic Assessment of Deep Learning Algorithms for Detection of Lymph Node Metastases in Women With Breast Cancer2017
- Author(s)
  Babak Ehteshami Bejnordi、the CAMELYON16 Consortium (Shigeto Seno(49番目, 総数61))
- Journal Title
  
  The Journal of the American Medical Association
  
  Volume: 318 Issue: 22 Pages: 2199-2199
- DOI
  10.1001/jama.2017.14585
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K00403
[Journal Article] Detecting shifts in gene regulatory networks during time-course experiments at single-time-point temporal resolution2016
- Author(s)
  Yoichi Takenaka, Shigeto Seno, Hideo Matsuda
- Journal Title
  
  J. Bioinformatics and Computational Biology
  
  Volume: 13 Issue: 05 Pages: 1543002-1543020
- DOI
  10.1142/s0219720015430027
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15K00402, KAKENHI-PROJECT-24700294, KAKENHI-PROJECT-26280106
[Journal Article] Proinflammatory cytokine interleukin-1β suppresses cold-induced thermogenesis in adipocytes2016
- Author(s)
  Tsuyoshi Goto, Supaporn Naknukool, Rieko Yoshitake, Yuki Hanafusa, Soshi Tokiwa, Yongjia Li, Tomoya Sakamoto, Takahiro Nitta, Minji Kim, Nobuyuki Takahashi, Rina Yu, Hiromi Daiyasu, Shigeto Seno, Hideo Matsuda, Teruo Kawada
- Journal Title
  
  Cytokine
  
  Volume: 77 Pages: 107-114
- DOI
  10.1016/j.cyto.2015.11.001
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24700294, KAKENHI-PROJECT-26280106
[Journal Article] グラフカットを用いた骨髄腔画像の領域分割2015
- Author(s)
  宇佐見潤, 繁田浩功, 間下以大, 黒田嘉宏, 菊田順一, 瀬尾茂人, 石井優, 松田秀雄, 竹村治雄
- Journal Title
  
  情報処理学会論文誌数理モデル化と応用
  
  Volume: ８ Pages: 18-27
- NAID
  110009886640
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24651229
[Journal Article] Metagenome fragment classification based on multiple motif-occurrence profiles2014
- Author(s)
  Naoki Matsushita, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Journal Title
  
  PeerJ
  
  Volume: 2: e559 Pages: 1-13
- DOI
  10.7717/peerj.559
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-24650155, KAKENHI-PROJECT-24700294, KAKENHI-PROJECT-26280106
[Journal Article] 混合正規分布モデルを用いた経時観測蛍光画像からの細胞核の検出と追跡手法2013
- Author(s)
  瀬尾茂人, 間下以大, 前田栄, 竹中要一, 石井優, 松田秀雄
- Journal Title
  
  情報処理学会論文誌　数理モデル化と応用
  
  Volume: 6(3) Pages: 140-150
- NAID
  110009550153
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24651229
[Journal Article] 複数時系列遺伝子発現プロファイルを利用した遺伝子制御ネットワーク推定の精度向上手法2013
- Author(s)
  渡邉之人, 瀬尾茂人, 竹中要一, 松田秀雄
- Journal Title
  
  情報処理学会論文誌数理モデル化と応用
  
  Volume: 6 Pages: 151-162
- NAID
  110009550160
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24700294
[Journal Article] An estimation method for a cellular-state-specific gene regulatory network along tree-structured gene expression profiles2013
- Author(s)
  Ryo Araki, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Journal Title
  
  Gene
  
  Volume: Vol.518 Issue: 1 Pages: 17-25
- DOI
  10.1016/j.gene.2012.11.090
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22310125, KAKENHI-PROJECT-22680023, KAKENHI-PROJECT-24650155, KAKENHI-PROJECT-24700294
[Journal Article] A Method for Isoform Prediction from RNA-Seq Data by Iterative Mapping2012
- Author(s)
  Tomoshige Ohno, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Journal Title
  
  IPSJ Transactions on Bioinformatics（TBIO）
  
  Volume: 5 Pages: 27-33
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24700294
[Journal Article] Improved prediction method for protein interactions using both structural and functional characteristics of proteins2010
- Author(s)
  Tatsuya Yoshikawa, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Journal Title
  
  IPSJ Transactions on Bioinformatics vol.3
  
  Pages: 10-23
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19700275
[Journal Article] A Combination Method of the Tanimoto Coefficient and Proximity Measure of Random Forest for Compound Activity Prediction2008
- Author(s)
  Gen Kawamura, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Journal Title
  
  IPSJ Transactions on Bioinformatics Vol.49No.SIG5
  
  Pages: 46-57
- NAID
  110006824830
- Data Source
  KAKENHI-PROJECT-19700275
[Journal Article] A Distributed-Processing System for Accelerating Biological Research using Data-Staging2008
- Author(s)
  Yoshiyuki Kido, Shigeto Seno, Susumu Date, Yoichi Takenaka, Hideo Matsuda
- Journal Title
  
  IPSJ Transactions on Bioinformatics Vol.49,No.SIG5
  
  Pages: 58-64
- Data Source
  KAKENHI-PROJECT-19700275
[Journal Article] A Method for Similarity Search of Genomic Positional Expression Using CAGE2006
- Author(s)
  Shigeto Seno
- Journal Title
  
  PLoS Genetics Vol. 2 ISS. 4
- Data Source
  KAKENHI-PROJECT-18800022
[Patent] 評価方法、評価装置およびプログラム2018
- Inventor(s)
  石井優、菊田順一、松田秀雄、瀬尾茂人
- Industrial Property Rights Holder
  石井優、菊田順一、松田秀雄、瀬尾茂人
- Industrial Property Rights Type
  特許
- Industrial Property Number
  2018-007571
- Filing Date
  2018
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] シングルセル解析の前処理について2023
- Author(s)
  瀬尾茂人
- Organizer
  NGS EXPO 2023
- Invited
- Data Source
  KAKENHI-PROJECT-22K12246
[Presentation] 細胞動画像とオミクスデータの統合的情報解析方法の開発への取り組み2023
- Author(s)
  瀬尾茂人
- Organizer
  第46回日本基礎老化学会大会
- Invited
- Data Source
  KAKENHI-PROJECT-22K12246
[Presentation] A Coarse-to-Fine Linear Programming Approarch for Spatial Transcriptome Deconvolution2023
- Author(s)
  Takeru Ishii, Shigeto Seno, Shunji Umetani, Hideo Matsuda
- Organizer
  GIW / ISCB-Asia 2023
- Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-22H05085
[Presentation] 骨イメージングではじめる動的多細胞コミュニティ学2023
- Author(s)
  瀬尾茂人、加藤晋、梅谷俊治、五十嵐彰、図斎大、澤亮治、呂沢宇、菊田順一
- Organizer
  日本科学振興協会年次大会2023
- Data Source
  KAKENHI-ORGANIZER-22H05083
[Presentation] A Graph Based Method of Pattern Mining for Spatial Transcriptome Data2023
- Author(s)
  Ayaka Mae, Shigeto Seno, Hironori Shigeta, Yu-Chen Liu, Sangeun Kim, Daisuke Okuzaki, Ryoichi Mori, Hideo Matsuda
- Organizer
  CBI学会2023年度大会
- Data Source
  KAKENHI-PROJECT-22K12246
[Presentation] Click-to-sense法による乳腺切除断端の術中迅速診断の開発2023
- Author(s)
  多根井智紀,波多野高明,北原友梨,盛本浩二,PradiptaAmbara, 谷口梓,久保杏奈,阿部かおり,増永奈苗,塚部昌美,草田義昭, 三宅智博,下田雅史,瀬尾茂人,中山貴寛,吉留克英,増田慎三, 森井英一,田中克典,島津研三
- Organizer
  第31回日本乳癌学会総会
- Data Source
  KAKENHI-PROJECT-22K08709
[Presentation] 畳み込みニューラルネットワークを用いた繰り返しパターンの検出手法と顕微鏡画像への応用2022
- Author(s)
  新田恭晟, 瀬尾茂人, 細田一史, 松田秀雄
- Organizer
  第137回数理モデル化と問題解決研究発表会
- Data Source
  KAKENHI-PROJECT-19H04207
[Presentation] 医療画像診断のための弱教師あり学習を用いた確信度付き良悪性分類手法2022
- Author(s)
  永野由貴斗, 瀬尾茂人, 多根井智紀, 草田義昭, 松田秀雄
- Organizer
  第25回情報論的学習理論ワークショップ(IBIS2022)
- Data Source
  KAKENHI-PROJECT-22K12246
[Presentation] 時系列ラベルを用いた物体検出による筋線維再生の定量評価の提案2022
- Author(s)
  山岡悠, 瀬尾茂人, 深田宗一朗, 松田秀雄
- Organizer
  第25回情報論的学習理論ワークショップ(IBIS2022)
- Data Source
  KAKENHI-PROJECT-22K12246
[Presentation] 動画像シミュレータを介した強化学習による細胞追跡手法2022
- Author(s)
  長村徹，瀬尾茂人，藤本健二，繁田浩功，松田秀雄
- Organizer
  第141回情報処理学会数理モデル化と問題解決研究会
- Data Source
  KAKENHI-PLANNED-22H05085
[Presentation] バイオインフォマティクスツールのエコシステム2022
- Author(s)
  瀬尾茂人
- Organizer
  NGS EXPO 2022
- Invited
- Data Source
  KAKENHI-PROJECT-19H04207
[Presentation] Click-to-sense法による乳腺切除断端の術中迅速診断の開発：多施設共同臨床試験 (KBCSG-TR2119)2022
- Author(s)
  多根井智紀,北原友梨,波多野高明,久保杏奈,Pradipta Ambara,盛本浩二,増永奈苗,吉波哲大,阿部かおり,草田義昭,三宅智博,加々良尚文,下田雅史,田中克典,瀬尾茂人,森井英一,中山貴寛,吉留克英,増田慎三,島津研三
- Organizer
  第30回日本乳癌学会総会
- Data Source
  KAKENHI-PROJECT-22K08709
[Presentation] 空間トランスクリプトーム解析のための数理最適化を用いた細胞比率の推定手法2022
- Author(s)
  Takeru Ishii, Shigeto Seno, Shunji Umetani and Hideo Matsuda
- Organizer
  第11回生命医薬情報学連合大会
- Data Source
  KAKENHI-PLANNED-22H05085
[Presentation] 医療画像診断のための弱教師あり学習を用いた確信度付き良悪性分類手法2022
- Author(s)
  永野由貴斗, 瀬尾茂人, 多根井智紀, 草田義昭, 松田秀雄
- Organizer
  第25回情報論的学習理論ワークショップ(IBIS2022)
- Data Source
  KAKENHI-PLANNED-22H05085
[Presentation] 時系列ラベルを用いた弱教師あり学習による筋組織再生過程の定量化手法の提案2022
- Author(s)
  椙村渉, 瀬尾茂人, 深田宗一朗, 松田秀雄
- Organizer
  第137回数理モデル化と問題解決研究発表会
- Data Source
  KAKENHI-PROJECT-19H04207
[Presentation] 細胞動画像シミュレータを介した強化学習による細胞追跡手法2022
- Author(s)
  長村徹, 瀬尾茂人, 藤本健二, 繁田浩功, 松田秀雄
- Organizer
  第25回画像の認識・理解シンポジウム
- Data Source
  KAKENHI-PLANNED-22H05085
[Presentation] 時系列ラベルを用いた物体検出による筋線維再生の定量評価の提案2022
- Author(s)
  山岡悠, 瀬尾茂人, 深田宗一朗, 松田秀雄
- Organizer
  第25回情報論的学習理論ワークショップ(IBIS2022)
- Data Source
  KAKENHI-PLANNED-22H05085
[Presentation] 生命科学データの情報処理について2021
- Author(s)
  瀬尾茂人
- Organizer
  化学工学会第52回秋季大会バイオ部会
- Invited
- Data Source
  KAKENHI-PROJECT-19H04207
[Presentation] Feature selection with VAE for scRNA-seq analysis2021
- Author(s)
  Toshiya Tanaka, Shigeto Seno, Hideo Matsuda
- Organizer
  29th Conference on Intelligent Systems for Molecular Biology (ISMB)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H04207
[Presentation] シングルセル発現解析ツールの動向について2021
- Author(s)
  瀬尾茂人
- Organizer
  Single-Cell 2021 Osaka セミナー
- Invited
- Data Source
  KAKENHI-PROJECT-19H04207
[Presentation] 核内エキソソームの分解ターゲットとなるpolyA+RNAの解析2021
- Author(s)
  杉元啓悟、藤原奈央子、瀬尾茂人、増田誠司
- Organizer
  日本農芸化学会2021年度仙台大会
- Data Source
  KAKENHI-PROJECT-19K22280
[Presentation] Cell trajectory inference for mouse stem cell differentiation using cell type information from single-cell RNA-seq data2021
- Author(s)
  Yutaka Izeki, Mona Mizutome, Junko Yoshida, Shigeto Seno, Kyoji Horie, Hideo Matsuda
- Organizer
  29th Conference on Intelligent Systems for Molecular Biology and 20th European Conference on Computational Biology (ISMB/ECCB)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K22894
[Presentation] 白色脂肪組織の glycerol kinase は細胞内脂肪酸代謝調節を介して褐色化を制御する2021
- Author(s)
  後藤剛、岩瀬麻里、常盤颯志、瀬尾茂人、向井貴子、高橋春弥、野村亘、Jheng Huei-Fen、松村成暢、楠堂達也、大里直樹、松田秀雄、井上和生、河田照雄
- Organizer
  日本農芸化学会 2021年度大会
- Data Source
  KAKENHI-PROJECT-20K21755
[Presentation] Cell trajectory inference for revealing differentiation process of mouse stem cells using single cell RNA-seq data2020
- Author(s)
  Takumi Adachi, Junko Yoshida, Shigeto Seno, Kyoji Horie, Hideo Matsuda
- Organizer
  28th Conference on Intelligent Systems for Molecular Biology (ISMB)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K22894
[Presentation] A method for tracking cell migration in vivo based on deep learning with target detection2020
- Author(s)
  Tsubasa Mizugaki, Utkrisht Rajkumar, Kenji Fujimoto, Hironori Shigeta, Shigeto Seno, Yutaka Uchida, Masaru Ishii, Vineet Bafna, Hideo Matsuda
- Organizer
  28th Conference on Intelligent Systems for Molecular Biology (ISMB)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K19842
[Presentation] Single-cell transcriptome analysis for elucidating cell dynamics2019
- Author(s)
  Naoki Osato, Hironori Shigeta, Shigeto Seno, Yutaka Uchida, Masaru Ishii, Hideo Matsuda
- Organizer
  Single cell biology meets diagnostics - 12th International workshop on approaches to single cell analysis
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H04124
[Presentation] Data Augmentation for Immune Cell Tracking using Random Walk Models and Generative Adversarial Networks2019
- Author(s)
  Kenji Fujimoto, Shigeto Seno, Hironori Shigeta, Tomohiro Mashita, Yutaka Uchida, Masaru Ishii, Hideo Matsuda
- Organizer
  Bioimage Informatics 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K19842
[Presentation] DNN models and postprocessing thresholds for endoscopy artifact detection in practice2019
- Author(s)
  Seiryo Watanabe, Shigeto Seno, Hideo Matsuda
- Organizer
  CEUR Workshop Proceedings
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K19842
[Presentation] 生体蛍光観察動画像の深度を考慮した深層学習による細胞追跡精度の改善2019
- Author(s)
  嶋田彩人, 瀬尾茂人, 繁田浩功, 間下以大, 内田穣, 石井優, 松田秀雄
- Organizer
  第122回数理モデル化と問題解決研究発表会
- Data Source
  KAKENHI-PROJECT-18K19842
[Presentation] 細胞画像の領域分割のための敵対的生成ネットワークを用いた訓練データ生成手法2019
- Author(s)
  藤本健二, 瀬尾茂人, 渡邊誓旅, 繁田浩功, 間下以大, 松田秀雄
- Organizer
  第22回画像の認識・理解シンポジウム (MIRU2019)
- Data Source
  KAKENHI-PROJECT-18K19842
[Presentation] 一細胞遺伝子発現解析のためのJoint-NMFを用いたクラスタリング手法2019
- Author(s)
  志賀幹夫, 瀬尾茂人, 鬼塚真, 松田秀雄
- Organizer
  第42回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-19H04207
[Presentation] バイオインフォマティクスと機械学習2019
- Author(s)
  瀬尾茂人
- Organizer
  阪大AI Meet UP
- Invited
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] A method for inferring gene regulatory networks based on pseudo time-series gene expression profiles from single-cell RNA-seq data2019
- Author(s)
  Kaito Uemura, Naoki Osato, Hironori Shigeta, Shigeto Seno, Hideo Matsuda
- Organizer
  27th Conference on Intelligent Systems for Molecular Biology and 18th European Conference on Computational Biology (ISMB/ECCB)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H04124
[Presentation] A study on novel estimation method of cell differentiation lineage by single cell trajectory inference2019
- Author(s)
  Shuhei Yao, Hironori Shigeta, Shigeto Seno, Hideo Matsuda
- Organizer
  27th Conference on Intelligent Systems for Molecular Biology and 18th European Conference on Computational Biology (ISMB/ECCB)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K22894
[Presentation] バイオインフォマティクスのデータマイニング2018
- Author(s)
  瀬尾茂人
- Organizer
  奈良先端科学技術大学院大学DSCトーク
- Invited
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] Detection of fusion genes from human breast cancer cell-line RNA-Seq data using shifted short read clustering2018
- Author(s)
  Yoshiaki Sota, Shigeto Seno, Hironori Shigeta, Naoki Osato, Masafumi Shimoda, Shinzaburo Noguchi, Hideo Matsuda
- Organizer
  IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE 2018)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18H04124
[Presentation] 細胞画像のセグメンテーション精度向上のための画像類推を用いた学習データ拡張2018
- Author(s)
  赤沢秀樹, 渡邊誓旅, 繁田浩功, 間下以大, 瀬尾茂人, 松田秀雄
- Organizer
  画像の認識・理解シンポジウム(MIRU2018)
- Data Source
  KAKENHI-PROJECT-18K19842
[Presentation] 細胞画像のセグメンテーション精度向上のための画像類推を用いた学習データ拡張2018
- Author(s)
  赤沢秀樹, 渡邊誓旅, 繁田浩功, 間下以大, 瀬尾茂人, 松田秀雄
- Organizer
  第21回画像の認識・理解シンポジウム MIRU2018
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] 細胞画像のセグメンテーション精度向上のための画像類推を用いた学習データ拡張2018
- Author(s)
  赤沢秀樹, 渡邊誓旅, 繁田浩功, 間下以大, 瀬尾茂人, 松田秀雄,
- Organizer
  画像の認識・理解シンポジウム(MIRU2018)
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] 細胞個体の移動傾向の違いを考慮したグローバルデータアソシエーションを用いた細胞追跡手法2017
- Author(s)
  伊藤澄美，瀬尾茂人，繁田浩功，菊田順一，竹中要一，石井優，松田秀雄
- Organizer
  第112回数理モデル化と問題解決研究発表会
- Place of Presentation
  岩手県盛岡市
- Year and Date
  2017-02-27
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] Clustering of cells for single cell analysis using latent Dirichlet allocation2017
- Author(s)
  Mitsuhiro Eto, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  International Conference on Intelligent Systems for Molecular Biology and European Conference on Computational Biology (ISMB/ECCB 2017)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] 細胞個体の移動傾向の違いを考慮したグローバルデータアソシエーションを用いた細胞追跡手法2017
- Author(s)
  伊藤澄美, 瀬尾茂人, 繁田浩功, 菊田順一, 竹中要一, 石井優, 松田秀雄
- Organizer
  情報処理学会第112回数理モデル化と問題解決研究発表会
- Place of Presentation
  清温荘（岩手県）
- Year and Date
  2017-02-27
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] 蛍光顕微鏡画像のためのグラフカットによる毛細血管の抽出手法2017
- Author(s)
  嶋田彩人, 繁田浩功, 瀬尾茂人, 池田わたる, 竹中要一, 松田秀雄
- Organizer
  第16回画像の認識・理解シンポジウム MIRU2017
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] 畳み込みニューラルネットワークを用いた脂肪細胞セグメンテーションにおける分割精度改善手法の提案2017
- Author(s)
  薮崎隼人, 瀬尾茂人, 竹中要一, 後藤剛, 河田照雄, 松田秀雄
- Organizer
  情報処理学会第112回数理モデル化と問題解決研究発表会
- Place of Presentation
  清温荘（岩手県）
- Year and Date
  2017-02-27
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] 一細胞解析のための潜在的ディリクレ配分法を用いた遺伝子群の機能予測手法2017
- Author(s)
  江藤充宏, 瀬尾茂人, 竹中要一, 松田秀雄
- Organizer
  NGS現場の会第五回研究会
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] Clustering of cells for single cell analysis using Latent Dirichlet Allocation2017
- Author(s)
  Mitsuhiro Eto, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  ISMB/ECCB 2017
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] A method of bioimage analysis for spatial pattern of cellular interaction and intercalation2017
- Author(s)
  Shigeto Seno, Masayuki Furuya, Junichi Kikuta, Masaru Ishii, Hideo Matsuda
- Organizer
  ISMB/ECCB 2017
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] A method of bioimage analysis for spatial pattern of cellular interaction and intercalation2017
- Author(s)
  Shigeto Seno, Masayuki Furuya, Junichi Kikuta, Masaru Ishii, Hideo Matsuda
- Organizer
  International Conference on Intelligent Systems for Molecular Biology and European Conference on Computational Biology (ISMB/ECCB 2017)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] Analyzing cell migration dynamics from intravital imaging by deformable image matching2017
- Author(s)
  Hideo Matsuda, Hironori Shigeta, Shigeto Seno, Junichi Kikuta, Masaru Ishii
- Organizer
  ISMB/ECCB 2017
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] １細胞RNA-seqの特性を考慮した遺伝子発現差解析手法の検討2017
- Author(s)
  大里直樹, 繁田浩功, 瀬尾茂人, 松田秀雄
- Organizer
  NGS現場の会第五回研究会
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] Analyzing cell migration dynamics from intravital imaging by deformable image matching2017
- Author(s)
  Hideo Matsuda, Hironori Shigeta, Shigeto Seno, Junichi Kikuta, Masaru Ishii
- Organizer
  International Conference on Intelligent Systems for Molecular Biology and European Conference on Computational Biology (ISMB/ECCB 2017)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] 畳み込みニューラルネットワークを用いた脂肪細胞セグメンテーションにおける分割精度改善手法の提案2017
- Author(s)
  薮崎隼人，瀬尾茂人，竹中要一，後藤剛，河田照雄，松田秀雄
- Organizer
  第112回数理モデル化と問題解決研究発表会
- Place of Presentation
  岩手県盛岡市
- Year and Date
  2017-02-27
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] A bone marrow cavity segmentation method using wavelet-based texture feature2016
- Author(s)
  Hironori Shigeta, Tomohiro Mashita, Junichi Kikuta, Shigeto Seno, Haruo Takemura, Hideo Matsuda, Masaru Ishii
- Organizer
  International Conference on Pattern Recognition (ICPR2016)
- Place of Presentation
  Cancun Center, Cancun, Mexico
- Year and Date
  2016-12-04
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] ウェーブレット特徴量を用いた生体骨組織の骨髄腔の領域分割手法2016
- Author(s)
  繁田浩功, 間下以大, 菊田順一, 瀬尾茂人, 竹村治雄, 松田秀雄, 石井優
- Organizer
  バイオイメージ・インフォマティクスワークショップ 2016
- Place of Presentation
  大阪大学銀杏会館（大阪府）
- Year and Date
  2016-06-22
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] An accurate estimation method for expression profiles of novel transcripts from RNA-Seq data2016
- Author(s)
  F. Iwasaki, S. Seno, Y. Takenaka, H. Matsuda
- Organizer
  International Conference on Intelligent Systems for Molecular Biology (ISMB2016)
- Place of Presentation
  Swan and Dolphin Hotel, Orlando, USA
- Year and Date
  2016-07-08
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] 画像処理とディープラーニングの手法を用いた病理診断支援2016
- Author(s)
  渡邊誓旅, 瀬尾茂人, 竹中要一, 松田秀雄
- Organizer
  バイオイメージインフォマティクスワークショップ2016
- Place of Presentation
  大阪府吹田市
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] オプティカルフローを用いた3次元生体イメージングデータからの細胞動態の解析2016
- Author(s)
  藤代昂希, 瀬尾茂人, 竹中要一, 古家雅之, 菊田順一, 石井優, 松田秀雄
- Organizer
  第201回CVIM研究会
- Place of Presentation
  金沢工業大学（石川県・野々市市）
- Year and Date
  2016-03-03
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] 模様特徴量とグラフカットを利用した生体骨組織の骨髄腔の領域分割2016
- Author(s)
  繁田浩功，間下以大，菊田順一，瀬尾茂人，石井優，松田秀雄
- Organizer
  第5回生命医薬情報学連合大会
- Place of Presentation
  東京国際交流館プラザ平成（東京都）
- Year and Date
  2016-09-29
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] A Bone Marrow Cavity Segmentation Method Using Wavelet-Based Texture Feature2016
- Author(s)
  Hironori Shigeta, Tomohiro Mashita, Junichi Kikuta, Shigeto Seno, Haruo Takemura, Hideo Matsuda, Masaru Ishii
- Organizer
  the 23rd International Conference on Pattern Recognition
- Place of Presentation
  Cancun, Mexico
- Year and Date
  2016-12-06
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] 抗がん剤の薬効評価のための経時観察蛍光画像からのデータマイニング2016
- Author(s)
  瀬尾茂人, 間下以大, 竹中要一, 石井優, 松田秀雄
- Organizer
  バイオイメージインフォマティクス・ワークショップ2015
- Place of Presentation
  九州大学病院キャンパスコラボ・ステーション（福岡県・福岡市）
- Year and Date
  2016-06-18
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] Bayesian network inference from gene expression profiles with a small number of samples2016
- Author(s)
  K. Saito, S. Seno, Y. Takenaka, H. Matsuda
- Organizer
  International Conference on Research in Computational Molecular Biology (RECOMB 2016)
- Place of Presentation
  UCLA, Los Angeles, USA
- Year and Date
  2016-04-17
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] バイオサイエンスのための生体医用画像2016
- Author(s)
  瀬尾茂人
- Organizer
  生体医用画像研究会第3回若手の会
- Place of Presentation
  大阪大学シグマホール（大阪府・豊中市）
- Year and Date
  2016-03-12
- Invited
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] A method for reducing false positives of target genes of microRNAs by combining two prediction tools2016
- Author(s)
  H. Matsuda, J. Tsuda, S. Seno, Y. Takenaka
- Organizer
  International Conference on Intelligent Systems for Molecular Biology (ISMB2016)
- Place of Presentation
  Swan and Dolphin Hotel, Orlando, USA
- Year and Date
  2016-07-08
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] Dynamic analysis of gene regulations using leaving-one-out expression profile2016
- Author(s)
  Y. Takenaka, S. Seno, H. Matsuda
- Organizer
  International Conference on Research in Computational Molecular Biology (RECOMB 2016)
- Place of Presentation
  UCLA, Los Angeles, USA
- Year and Date
  2016-04-17
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] 小サンプル数データに対するベイジアンネットワークのスコアベース構造学習改善手法2016
- Author(s)
  齋藤和正, 瀬尾茂人, 竹中要一, 松田秀雄
- Organizer
  情報処理学会第45回バイオ情報学研究発表会
- Place of Presentation
  北陸先端科学技術大学院大学（石川県）
- Year and Date
  2016-03-18
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] オプティカルフローとウェーブレット解析を用いた白血球の動態の解析手法2016
- Author(s)
  松原周平, 瀬尾茂人, 西澤志乃, 菊田順一, 竹中要一, 石井優, 松田秀雄
- Organizer
  バイオイメージインフォマティクスワークショップ2016
- Place of Presentation
  大阪府吹田市
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] Deep learningを用いた脂肪組織画像における細胞の認識2016
- Author(s)
  水野雄太，瀬尾茂人，渡邊誓旅，竹中要一, 平松拓郎，後藤剛，河田照雄，松田秀雄
- Organizer
  第107回数理モデル化と問題解決研究発表会
- Place of Presentation
  山口県健康づくりセンター（山口県・山口市）
- Year and Date
  2016-03-07
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] コンポーネントツリーとデータアソシエーションを用いた細胞追跡手法2016
- Author(s)
  藏重昂平，瀬尾茂人，竹中要一，松田秀雄
- Organizer
  第107回数理モデル化と問題解決研究発表会
- Place of Presentation
  山口県健康づくりセンター（山口県・山口市）
- Year and Date
  2016-03-07
- Data Source
  KAKENHI-PROJECT-15K00403
[Presentation] オプティカルフローとウェーブレット解析を用いた白血球の動態の解析手法2016
- Author(s)
  松原周平, 瀬尾茂人, 西澤志乃, 菊田順一, 竹中要一, 石井優, 松田秀雄
- Organizer
  バイオイメージ・インフォマティクスワークショップ 2016
- Place of Presentation
  大阪大学銀杏会館（大阪府）
- Year and Date
  2016-06-22
- Data Source
  KAKENHI-PROJECT-16K12525
[Presentation] ダイナミックベイジアンネットワークを用いた遺伝子制御ネットワーク推定の部分問題化による近似解法2015
- Author(s)
  上木怜, 瀬尾茂人, 竹中要一, 松田秀雄
- Organizer
  第42回バイオ情報学研究会
- Place of Presentation
  沖縄科学技術大学院大学（沖縄県）
- Year and Date
  2015-06-23
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] Detecting the shifts of gene regulatory networks during time-course experiments with a single time point temporal resolution2015
- Author(s)
  Yoichi Takenaka, Shigeto Seno, Hideo Matsuda
- Organizer
  GIW/InCOB2015
- Place of Presentation
  日本科学未来館（江東区）
- Year and Date
  2015-09-09
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] イメージングデータの定量化とトランスオミクス解析2015
- Author(s)
  瀬尾茂人
- Organizer
  生理学研究所研究会
- Place of Presentation
  自然科学研究機構岡崎コンファレンスセンター（岡崎市）
- Year and Date
  2015-09-14
- Invited
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] 大域データ対応付けの反復実行による細胞追跡精度の改善手法2014
- Author(s)
  藏重昂平, 福田浩二郎, 瀬尾茂人, 間下以大, 竹中要一, 松田秀雄
- Organizer
  情報処理学会第39回バイオ情報学研究会
- Place of Presentation
  大阪大学情報科学研究科（大阪府）
- Year and Date
  2014-09-19
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] ベイジアンネットワークによる遺伝子制御ネットワーク推定結果の反復構築のための計算速度向上手法2014
- Author(s)
  津田絢子, 瀬尾茂人, 竹中要一, 松田秀雄
- Organizer
  情報処理学会第38回バイオ情報学研究会
- Place of Presentation
  沖縄科学技術大学院大学（沖縄県）
- Year and Date
  2014-06-26
- Data Source
  KAKENHI-PROJECT-26280106
[Presentation] タイムラプスイメージングによる細胞周期観測画像の時空間解析2014
- Author(s)
  福田浩二郎, 瀬尾茂人, 間下以大, 竹中要一, 松田秀雄
- Organizer
  バイオイメージ・インフォマティクスワークショップ
- Place of Presentation
  岡崎コンファレンスセンター（愛知県）
- Year and Date
  2014-06-09
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] 経時観測蛍光画像からのモーションヒストリーイメージを用いた細胞分裂の検出方法2013
- Author(s)
  福田浩二郎, 瀬尾茂人, 間下以大, 前田栄, 竹中要一, 石井優, 松田秀雄
- Organizer
  画像の認識・理解シンポジウムMIRU2013
- Place of Presentation
  国立情報学研究所, 東京
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] Global Data Associationによる経時観察画像における破骨前駆細胞の自動追跡手法2013
- Author(s)
  尾野貴広, 瀬尾茂人, 間下以大, 竹中要一, 石井優, 松田秀雄
- Organizer
  画像の認識・理解シンポジウムMIRU2013
- Place of Presentation
  国立情報学研究所, 東京
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] n automatic cell-tracking method and spatiotemporal analysis for time-lapse multicolor fluorescent images of cell cycle2012
- Author(s)
  Shigeto Seno
- Organizer
  第35回日本分子生物学会年会
- Place of Presentation
  福岡国際会議場（福岡県）
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] A cell-tracking method for time-lapse multicolor fluorescent images2012
- Author(s)
  Shigeto Seno
- Organizer
  Bioimage Informatics 2012
- Place of Presentation
  Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] An estimation method for a cellular-state-specific gene regulatory network along tree-structured gene expression profiles2012
- Author(s)
  Ryo Araki, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  GIW2012
- Place of Presentation
  Tainan, Taiwan
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] Transcript-Type Dependent Normalization of Expression Levels in RNA-Seq Data for Non-Coding RNA Analysis2012
- Author(s)
  Tomoshige Ohno, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  Joint Conference on Informatics is Biology, Medicine and Pharmacology 2012
- Place of Presentation
  Tokyo, Japan
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] Bayes-based inference of gene regulatory network for multiple time series gene expression profile2012
- Author(s)
  Yukito Watanabe, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  Joint Conference on Informatics is Biology, Medicine and Pharmacology 2012
- Place of Presentation
  Tokyo, Japan
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] Estimate Dynamic Gene Regulatory Networks in Adipocyte Differentiation for Detecting Changes of Gene Regulations by Splitting Time Course Data2012
- Author(s)
  Tomoyoshi Nakayama, Yoshiyuki Kido, Hiromi Daiyasu, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  GIW2012
- Place of Presentation
  Tainan, Taiwan
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] A method for analyzing gene expression profiles based on the underlying structures2009
- Author(s)
  Shigeto Seno
- Organizer
  International Conference on Intelligent Systems for Molecular Biology (ISMB2009)
- Place of Presentation
  Stockholm, Sweden
- Year and Date
  2009-06-29
- Data Source
  KAKENHI-PROJECT-19700275
[Presentation] An approach for efficient computational analysis of massive RNA-Seq data2009
- Author(s)
  石川元一, 瀬尾茂人, 竹中要一, 松田秀雄
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-19700275
[Presentation] CAGE発現プロファイルを用いた転写開始点の発現パターンのクラスタリング手法2008
- Author(s)
  寺家谷満, 瀬尾茂人, 竹中要一, 松田秀雄
- Organizer
  日本分子生物学会第8回春季シンポジウム
- Place of Presentation
  京王プラザホテル札幌
- Year and Date
  2008-05-26
- Data Source
  KAKENHI-PROJECT-19700275
[Presentation] A method for analysis of tissue-specific alternative transcripts using CAGE tags2008
- Author(s)
  Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  Intelligent Systems for Molecular Biology (ISMB2008)
- Place of Presentation
  Toronto, Canada
- Year and Date
  2008-07-21
- Data Source
  KAKENHI-PROJECT-19700275
[Presentation] A method for analysis of tissue-specific alternative transcripts using CAGE tags2008
- Author(s)
  Shigeto Seno
- Organizer
  Intelligent Systems for Molecular Biology(ISMB2008)
- Place of Presentation
  Toronto, Canada
- Year and Date
  2008-07-21
- Data Source
  KAKENHI-PROJECT-19700275
[Presentation] A Clustering Method for Expression Patterns of Transcription Starting Sites2008
- Author(s)
  Mitsuru Jikeya, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  Intelligent Systems for Molecular Biology (ISMB2008)
- Place of Presentation
  Toronto, Canada
- Year and Date
  2008-07-21
- Data Source
  KAKENHI-PROJECT-19700275
[Presentation] グラフ構造を用いた組織特異的な選択的スプライシングの解析手法2007
- Author(s)
  瀬尾茂人, 竹中要一, 松田秀雄
- Organizer
  日本分子生物学会第30回大会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2007-12-11
- Data Source
  KAKENHI-PROJECT-19700275
[Presentation] ベイジアンネットワークによる遺伝子制御ネットワーク推定結果の反復構築のための計算速度向上手法
- Author(s)
  津田絢子,瀬尾茂人,竹中要一,松田秀雄
- Organizer
  第98回MPS・第38回BIO合同研究発表会
- Place of Presentation
  沖縄科学技術大学院大学
- Year and Date
  2014-06-25 – 2014-06-27
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] A Method of Sequence Analysis for High-Throughput Sequencer Data Based on Shifted Short Read Clustering
- Author(s)
  Kensuke Suzuki, Daisuke Ueta, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  BIOCOMP2013
- Place of Presentation
  Las Vegas, Nevada, USA
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] Reconstruction of Dynamic Gene Regulatory Networks for Cell Differentiation by Separation of Time-course Data
- Author(s)
  Tomoyoshi Nakayama, Hiromi Daiyasu, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  BIOCOMP2013
- Place of Presentation
  Las Vegas, Nevada, USA
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] 多色蛍光タイムラプスイメージングによる細胞周期観測データのための細胞自動追跡手法
- Author(s)
  瀬尾茂人
- Organizer
  バイオイメージ・インフォマティクスワークショップ2012
- Place of Presentation
  理化学研究所発生・再生科学総合研究センター、神戸（兵庫県）
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] Integrative prediction of miRNA-mRNA interactions from high-throughput sequencing data
- Author(s)
  Tomoshige Ohno, Hiromi Daiyasu, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  RECOMB DREAM 2013
- Place of Presentation
  Las Vegas, Nevada, USA
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] 混合正規分布モデルを用いた経時観測蛍光画像からの細胞核の検出と追跡手法
- Author(s)
  瀬尾茂人
- Organizer
  情報処理学会第92回数理モデル化と問題解決研究会
- Place of Presentation
  武雄市文化会館（佐賀県）
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] 多色蛍光イメージングによる経時観測データのための細胞追跡手法
- Author(s)
  瀬尾茂人
- Organizer
  ビジョン技術の実利用ワークショップ View2012
- Place of Presentation
  パシフィコ横浜アネックス・ホール、横浜（神奈川県）
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] Improvement approach of cell tracking accuracy by using inter-frame information
- Author(s)
  Kohei Kurashige, Shigeto Seno, Tomohiro Mashita, Junichi Kikuta, Yoichi Takenaka, Masaru Ishii, Hideo Matsuda
- Organizer
  Bioimage Informatics Conference
- Place of Presentation
  フラームスブラバント州庁舎（ルーベン、ベルギー）
- Year and Date
  2014-10-08 – 2014-10-10
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] Gene Set Enrichment Analysis for a Long Time Series Gene Expression Profile
- Author(s)
  Yuta Okuma, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda
- Organizer
  BIOCOMP2013
- Place of Presentation
  Las Vegas, Nevada, USA
- Data Source
  KAKENHI-PROJECT-24700294
[Presentation] An automatic event detection method using semi-supervised learning for time-lapse imaging data
- Author(s)
  Kojiro Fukuda, Shigeto Seno, Tomohiro Mashita, Yoichi Takenaka, Masaru Ishii, Hideo Matsuda
- Organizer
  Bioimage Informatics Conference
- Place of Presentation
  フラームスブラバント州庁舎（ルーベン、ベルギー）
- Year and Date
  2014-10-08 – 2014-10-10
- Data Source
  KAKENHI-PROJECT-24651229
[Presentation] Automatic cell tracking for time-lapse fluorescent images of cell cycle
- Author(s)
  Shigeto Seno
- Organizer
  International Symposium "Towards Comprehensive Understanding of Immune Dynamism"
- Place of Presentation
  Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany
- Data Source
  KAKENHI-PROJECT-24651229

1. MATSUDA Hideo (50183950)

# of Collaborated Projects: 5 results

# of Collaborated Products: 36 results
2. ISHII Masaru (10324758)

# of Collaborated Projects: 2 results

# of Collaborated Products: 13 results
3. Goto Tsuyoshi (10550311)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
4. 高橋春弥 (30750369)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
5. KAWADA Teruo (10177701)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
6. Masuda Seiji (20260614)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
7. 間下以大 (00467606)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
8. 山下英里華 (10880106)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 水野紘樹 (90707655)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 井上和生 (80213148)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
11. 多根井智紀 (80771518)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
12. 盛本浩二 (00599996)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
13. PRADIPTA AMBARA (90631648)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
14. 亀井康富 (70300829)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. 梅谷俊治 (80367820)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
16. 菊田順一 (60710069)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
17. 加藤晋 (30553101)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
18. 藤木文博 (40456926)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
19. OSATO Naoki

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
20. 竹中要一

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results

SENOO Shigeto 瀬尾 茂人

SENO Shigeto 瀬尾 茂人

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時空間情報を統合した1細胞発現解析手法の開発Principal Investigator

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細胞動画像とオミクスデータの統合による細胞コミュニティの解析手法の開発Principal Investigator

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Development of integrated analysis technology for bioimaging and omics dataPrincipal Investigator

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Development of Automated Cellular Video Image Processing Technology Using Reinforcement Learning via Simulation and GANPrincipal Investigator

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Development of spatio-temporal analysis method for bioimaging dataPrincipal Investigator

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SENOO Shigeto 瀬尾茂人

SENO Shigeto 瀬尾茂人