SHIBATA Satoshi 柴田敏史

… Alternative Names

Satoshi Shibata 柴田敏史

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Researcher Number	30725057
Other IDs
Affiliation (Current)	2025: 鳥取大学, 医学部, 講師
Affiliation (based on the past Project Information) *help	2021 – 2023: 鳥取大学, 医学部, 講師 2017 – 2020: 沖縄科学技術大学院大学, 生体分子電子顕微鏡解析ユニット, 研究員
Review Section/Research Field	Principal Investigator Basic Section 49050:Bacteriology-related / Basic Section 57020:Oral pathobiological science-related / Morphological basic dentistry
Keywords	Principal Investigator 線毛 / V型線毛 / 細菌叢 / クライオ電子顕微鏡 / 歯周病 / Bacteroidota / Bacteroides / 腸内細菌 / P. gingivalis / Type V pili … More / 5型線毛 / 付着 / cryo-EM / アドヘジン / Bacteroidota門 / バイオフィルム / Bacteroidota 門 / V 型線毛 / 口腔細菌 / 歯周病細菌 / 滑走運動 / バクテロイデーテス / IX型分泌機構 / GldJ局在 / 超解像顕微鏡 / 浸透圧ショック法 / 透過型電子顕微鏡 / 細菌滑走運動 / T9SS / 滑走細菌 / 病原性細菌 / 電子顕微鏡 / 分泌装置 Less

Understanding the adhesion mechanism of type V pili for the development of methods to control intestinal FloraPrincipal Investigator
- Principal Investigator
  
  柴田敏史
- Project Period (FY)
  2023 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 49050:Bacteriology-related
- Research Institution
  Tottori University
Elucidation of the whole structure of type V pilus of a periodontal pathogen by using cryo-EMPrincipal Investigator
- Principal Investigator
  
  SHIBATA Satoshi
- Project Period (FY)
  2019 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 57020:Oral pathobiological science-related
- Research Institution
  Tottori University
  Okinawa Institute of Science and Technology Graduate University
Functional analysis of Type IX secretion system using nano scale biomolecule imaging approachPrincipal Investigator
- Principal Investigator
  
  Satoshi Shibata
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Morphological basic dentistry
- Research Institution
  Okinawa Institute of Science and Technology Graduate University

All 2023 2022 2021 2020 2019 2018 2017

All Journal Article Presentation Book

[Book] クライオ電子顕微鏡ハンドブック2023
- Author(s)
  柴田敏史 (分担)、難波啓一、加藤貴之、牧野文信(編集)、
- Total Pages
  460
- Publisher
  エヌ・ティー・エス
- ISBN
  9784860438043
- Data Source
  KAKENHI-PROJECT-19K10083
[Journal Article] A conditional gene expression system in Porphyromonas gingivalis for study of the secretion mechanisms of lipoproteins and T9SS cargo proteins2023
- Author(s)
  Sasaki Yuko、Shoji Mikio、Sueyoshi Takayuki、Shibata Satoshi、Matsuo Takehiro、Yukitake Hideharu、Wolf Matthias、Naito Mariko
- Journal Title
  
  Molecular Oral Microbiology
  
  Volume: 38 Issue: 4 Pages: 321-333
- DOI
  10.1111/omi.12426
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K09928, KAKENHI-PROJECT-22K09941, KAKENHI-PROJECT-23K06530, KAKENHI-PROJECT-23K09151
[Journal Article] Temporal dynamics of charge buildup in cryo-electron microscopy2023
- Author(s)
  Schreiber Makoto Tokoro、Maigne Alan、Beleggia Marco、Shibata Satoshi、Wolf Matthias
- Journal Title
  
  Journal of Structural Biology: X
  
  Volume: 7 Pages: 100081-100081
- DOI
  10.1016/j.yjsbx.2022.100081
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K10083
[Journal Article] Live Cell Imaging of Gliding Motility of Flavobacterium johnsoniae Under High-Resolution Microscopy2023
- Author(s)
  Nakane Daisuke, Shibata Satoshi
- Journal Title
  
  Methods in Molecular Biology, Bacterial and Archaeal Motility
  
  Volume: 2646 Pages: 277-286
- DOI
  10.1007/978-1-0716-3060-0_22
- ISBN
  9781071630594, 9781071630600
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K07020, KAKENHI-PLANNED-22H05066, KAKENHI-PROJECT-19K10083
[Journal Article] Isolation and Visualization of Gliding Motility Machinery in Bacteroidota2023
- Author(s)
  Shibata Satoshi, Nakane Daisuke
- Journal Title
  
  Methods in Molecular Biology, Bacterial and Archaeal Motility
  
  Volume: 2646 Pages: 267-276
- DOI
  10.1007/978-1-0716-3060-0_21
- ISBN
  9781071630594, 9781071630600
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K07020, KAKENHI-PLANNED-22H05066, KAKENHI-PROJECT-19K10083
[Journal Article] Filamentous structures in the cell envelope are associated with bacteroidetes gliding machinery2023
- Author(s)
  Shibata Satoshi, Tahara Yuhei O., Katayama Eisaku, Kawamoto Akihiro, Kato Takayuki, Zhu Yongtao, Nakane Daisuke, Namba Keiichi, Miyata Makoto, McBride Mark J., Nakayama Koji
- Journal Title
  
  Communications Biology
  
  Volume: 6 Issue: 1 Pages: 94-94
- DOI
  10.1038/s42003-023-04472-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K07020, KAKENHI-ORGANIZER-22H05065, KAKENHI-PLANNED-22H05066, KAKENHI-PROJECT-19K10083, KAKENHI-PROJECT-20K09921, KAKENHI-ORGANIZER-19H05794
[Journal Article] A Multi-Rail Structure in the Cell Envelope for the Bacteroidetes Gliding Machinery2022
- Author(s)
  Shibata Satoshi、Tahara Yuhei O.、Katayama Eisaku、Kawamoto Akihiro、Kato Takayuki、Zhu Yongtao、Nakane Daisuke、Namba Keiichi、Miyata Makoto、McBride Mark J.、Nakayama Koji
- Journal Title
  
  Research Square
  
  Volume: -
- DOI
  10.21203/rs.3.rs-1802191/v1
- Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K10083
[Journal Article] Type V Pilus is Assembled by a Protease-mediated Strand-exchange Mechanism2022
- Author(s)
  SHIBATA Satoshi
- Journal Title
  
  Seibutsu Butsuri
  
  Volume: 62 Issue: 1 Pages: 32-35
- DOI
  10.2142/biophys.62.32
- ISSN
  0582-4052, 1347-4219
- Language
  Japanese
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K10083
[Journal Article] Investigation of Bacteria from Spoiled Bottled Salad Dressing Leading to Gas Explosion2022
- Author(s)
  Obata Fumiko、Murota Hiromi、Shibata Satoshi、Ozuru Ryo、Fujii Jun
- Journal Title
  
  Yonago Acta Medica
  
  Volume: 65 Issue: 3 Pages: 207-214
- DOI
  10.33160/yam.2022.08.005
- ISSN
  0513-5710, 1346-8049
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K10083
[Journal Article] 細菌の新奇Ⅴ型線毛でみられる原子レベルでの「ほぞ継ぎ」技法2021
- Author(s)
  柴田敏史
- Journal Title
  
  実験医学
  
  Volume: 38(14) Pages: 2380-2383
- Data Source
  KAKENHI-PROJECT-19K10083
[Journal Article] Structure of polymerized type V pilin reveals assembly mechanism involving protease-mediated strand exchange2020
- Author(s)
  Satoshi Shibata, Mikio Shoji, Kodai Okada, Hideyuki Matsunami, Melissa Matthews, Katsumi Imada, Koji Nakayama and Matthias Wolf
- Journal Title
  
  Nature Microbiology
  
  Volume: － Issue: 6 Pages: 830-837
- DOI
  10.1038/s41564-020-0705-1
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K10072, KAKENHI-PROJECT-17H04370, KAKENHI-PROJECT-17K17085, KAKENHI-PROJECT-19K10083, KAKENHI-PROJECT-20K09921
[Journal Article] Transport and Polymerization of Porphyromonas gingivalis Type V Pili2020
- Author(s)
  Shoji M, Shibata S, Naito M, Nakayama K.
- Journal Title
  
  Methods in Molecular Microbiology
  
  Volume: 2210 Pages: 61-73
- DOI
  10.1007/978-1-0716-0939-2_7
- ISBN
  9781071609385, 9781071609392
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K10072, KAKENHI-PROJECT-19K10083, KAKENHI-PROJECT-20K09921
[Journal Article] Biogenesis of Type V pili.2020
- Author(s)
  Shoji M, Shibata S, Sueyoshi T, Naito M, Nakayama K.
- Journal Title
  
  Microbiology and Immunology
  
  Volume: 64(10) Issue: 10 Pages: 643-656
- DOI
  10.1111/1348-0421.12838
- NAID
  120006988474
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K10072, KAKENHI-PROJECT-19K10083, KAKENHI-PROJECT-20K09921
[Journal Article] Application of spherical substrate to observe bacterial motility machineries by Quick-Freeze-Replica Electron Microscopy2019
- Author(s)
  Katayama Eisaku、Tahara Yuhei O.、Bertin Clothilde、Shibata Satoshi
- Journal Title
  
  Scientific Reports
  
  Volume: 9 Issue: 1 Pages: 14765-14765
- DOI
  10.1038/s41598-019-51283-w
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K10083, KAKENHI-PROJECT-17K17085
[Journal Article] High‐resolution archaellum structure reveals a conserved metal‐binding site2019
- Author(s)
  Meshcheryakov Vladimir A、Shibata Satoshi、Schreiber Makoto Tokoro、Villar‐Briones Alejandro、Jarrell Kenneth F、Aizawa Shin‐Ichi、Wolf Matthias
- Journal Title
  
  EMBO reports
  
  Volume: 20 Issue: 5
- DOI
  10.15252/embr.201846340
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K10083, KAKENHI-PROJECT-17K17085
[Journal Article] Torque transmission mechanism of the curved bacterial flagellar hook revealed by cryo-EM.2019
- Author(s)
  Shibata S, Matsunami H, Aizawa SI, Wolf M
- Journal Title
  
  Nature structural & molecular biology
  
  Volume: 26 Issue: 10 Pages: 941-945
- DOI
  10.1038/s41594-019-0301-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K07318, KAKENHI-PROJECT-19K10083, KAKENHI-PROJECT-17K17085
[Journal Article] バクテロイデーテス細菌の滑走運動2018
- Author(s)
  柴田敏史、中山浩次
- Journal Title
  
  生物工学会誌
  
  Volume: 96 Pages: 204-207
- Open Access
- Data Source
  KAKENHI-PROJECT-17K17085
[Presentation] Porphyromonas gingivalisにおけるタンパク質一過的発現系の構築2023
- Author(s)
  庄子幹郎, 佐々木祐子, 末吉峻幸, 柴田敏史, 松尾長大, 雪竹英治, Matthias Wolf, 内藤真理子
- Organizer
  第 75 回日本細菌学会九州支部総会
- Data Source
  KAKENHI-PROJECT-23K06530
[Presentation] クライオ電子顕微鏡構造解析で明らかになったV 型線毛の構造と構築機構2023
- Author(s)
  柴田敏史
- Organizer
  第76回日本細菌学会中国四国支部総会
- Invited
- Data Source
  KAKENHI-PROJECT-23K06530
[Presentation] Cryo-EM structure of the Mfa minor type V pilus from the oral pathogen Porphyromonas gingivalis2023
- Author(s)
  柴田敏史, 庄子幹郎, 松波秀行, Matthias Wolf, 藤井潤
- Organizer
  第96回日本細菌学会総会
- Data Source
  KAKENHI-PROJECT-19K10083
[Presentation] Bacteroidota門に特有なV型線毛の構造と構築機構2023
- Author(s)
  柴田敏史
- Organizer
  日本顕微鏡学会第79回学術講演会
- Invited
- Data Source
  KAKENHI-PROJECT-23K06530
[Presentation] クライオ電子顕微鏡解析で明らかになったV 型線毛の構造と構築機構2023
- Author(s)
  柴田敏史
- Organizer
  第14回日本生物物理学会中国四国支部大会
- Data Source
  KAKENHI-PROJECT-23K06530
[Presentation] 歯周病菌Mfa53線毛の構造2023
- Author(s)
  小島嶺, 庄子幹郎, 柴田敏史, 竹川宜宏, 今田勝巳
- Organizer
  第26回べん毛研究交流会
- Data Source
  KAKENHI-PROJECT-19K10083
[Presentation] Study of protein secretion mechanisms in Porphyromonas gingivalis2023
- Author(s)
  庄子幹郎, 佐々木祐子, 末吉峻幸, 柴田敏史, 松尾長大, 雪竹英治, Matthias Wolf, 内藤真理子
- Organizer
  第96回日本細菌学会総会
- Data Source
  KAKENHI-PROJECT-19K10083
[Presentation] 細菌表面のフィラメント状超分子複合体の構造解析2022
- Author(s)
  柴田敏史
- Organizer
  第 16 回細菌学若手コロッセウム
- Data Source
  KAKENHI-PROJECT-19K10083
[Presentation] バクテロイデア綱細菌のV型線毛の構築機構2021
- Author(s)
  柴田敏史
- Organizer
  第15回細菌学若手コロッセウム
- Invited
- Data Source
  KAKENHI-PROJECT-19K10083
[Presentation] The assembly mechanism and structures of Type V pili2021
- Author(s)
  柴田敏史, 庄子幹郎, Matthias Wolf, 藤井潤
- Organizer
  第95回日本細菌学会総会
- Invited
- Data Source
  KAKENHI-PROJECT-19K10083
[Presentation] Polarity and growth direction of an archaellum filament2019
- Author(s)
  Satoshi Shibata, Shin-Ichi Aizawa and Matthias Wolf
- Organizer
  第24回べん毛交流会
- Data Source
  KAKENHI-PROJECT-17K17085
[Presentation] Cryo-EM Structure of polymerized Type V pilus of P. gingivalis reveals assembly mechanism2019
- Author(s)
  柴田敏史, 庄子幹郎, 松波秀行, Melissa Matthews, 今田勝己, 中山浩次, Matthias Wolf
- Organizer
  第93回日本細菌学会総会
- Invited
- Data Source
  KAKENHI-PROJECT-19K10083
[Presentation] Cryo-EM Structure of polymerized Type V pilus of P. gingivalis reveals assembly mechanism2019
- Author(s)
  柴田敏史, 庄子幹郎, 松波秀行, Melissa Matthews, 今田勝己, 中山浩次, Matthias Wolf
- Organizer
  第93回日本細菌学会総会
- Invited
- Data Source
  KAKENHI-PROJECT-17K17085
[Presentation] Structural analysis of Type V pilus by Cryo-electron microscopy2018
- Author(s)
  柴田敏史, 庄子幹郎, 岡田広大, 今田勝巳, 中山浩次, Wolf Matthias
- Organizer
  日本生物物理学会第56回年会
- Data Source
  KAKENHI-PROJECT-17K17085
[Presentation] Structure of FimA, a major component protein of fimbriae of Porphyromonas gingivitis2018
- Author(s)
  岡田広大, 中山浩次, 庄子幹郎, 柴田敏史, 今田勝巳
- Organizer
  日本生物物理学会第56回年会
- Data Source
  KAKENHI-PROJECT-17K17085
[Presentation] Metal ion binding of the Methanococcus archaellin required for filament integrity2017
- Author(s)
  柴田敏史、Matthias Wolf
- Organizer
  第23回べん毛交流会
- Data Source
  KAKENHI-PROJECT-17K17085
[Presentation] Structural analysis of Type V pilus by Cryo-electron microscopy2017
- Author(s)
  Shibata S., Shoji M., Nakayama K., Wolf M.
- Organizer
  第91回日本細菌学会総会
- Data Source
  KAKENHI-PROJECT-17K17085
[Presentation] A Multi-Rail structure in the cell envelope for the Bacteroidete gliding machinery2017
- Author(s)
  Shibata S., Tahara O. Y., Katayama E., Kawamoto A., Kato T., Zhu Y., Namba K., Miyata M., Nakane D., McBride J. M., Nakayama K.
- Organizer
  Internatonal symposium Harmonized supermolecular motility machinery and its diversity
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K17085

1. Wolf Matthias (90630947)

# of Collaborated Projects: 2 results

# of Collaborated Products: 7 results
2. 庄子幹郎 (10336175)

# of Collaborated Projects: 1 results

# of Collaborated Products: 9 results
3. 松波秀行 (80444511)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
4. IMADA Katsumi

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
5. 内藤真理子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
6. 雪竹英治

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
7. 中根大介

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results

SHIBATA Satoshi 柴田 敏史

Satoshi Shibata 柴田 敏史

Research Projects

Research Products

Co-Researchers

Understanding the adhesion mechanism of type V pili for the development of methods to control intestinal FloraPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Elucidation of the whole structure of type V pilus of a periodontal pathogen by using cryo-EMPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Functional analysis of Type IX secretion system using nano scale biomolecule imaging approachPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Book] クライオ電子顕微鏡ハンドブック2023

Author(s)

Total Pages

Publisher

ISBN

Data Source

[Journal Article] A conditional gene expression system in Porphyromonas gingivalis for study of the secretion mechanisms of lipoproteins and T9SS cargo proteins2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Temporal dynamics of charge buildup in cryo-electron microscopy2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Live Cell Imaging of Gliding Motility of Flavobacterium johnsoniae Under High-Resolution Microscopy2023

Author(s)

Journal Title

DOI

ISBN

Data Source

[Journal Article] Isolation and Visualization of Gliding Motility Machinery in Bacteroidota2023

Author(s)

Journal Title

DOI

ISBN

Data Source

[Journal Article] Filamentous structures in the cell envelope are associated with bacteroidetes gliding machinery2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] A Multi-Rail Structure in the Cell Envelope for the Bacteroidetes Gliding Machinery2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Type V Pilus is Assembled by a Protease-mediated Strand-exchange Mechanism2022

Author(s)

Journal Title

DOI

ISSN

Language

Data Source

[Journal Article] Investigation of Bacteria from Spoiled Bottled Salad Dressing Leading to Gas Explosion2022

Author(s)

Journal Title

DOI

ISSN

Language

Data Source

[Journal Article] 細菌の新奇Ⅴ型線毛でみられる原子レベルでの「ほぞ継ぎ」技法2021

Author(s)

Journal Title

Data Source

[Journal Article] Structure of polymerized type V pilin reveals assembly mechanism involving protease-mediated strand exchange2020

SHIBATA Satoshi 柴田敏史

Satoshi Shibata 柴田敏史

[Presentation] クライオ電子顕微鏡構造解析で明らかになったV 型線毛の構造と構築機構2023

[Presentation] クライオ電子顕微鏡解析で明らかになったV 型線毛の構造と構築機構2023