Kashiwagi Akiko 柏木明子

… Alternative Names

KASHIWAGI Akiko 柏木明子

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Researcher Number	40362652
Affiliation (Current)	2025: 弘前大学, 農学生命科学部, 教授
Affiliation (based on the past Project Information) *help	2022 – 2024: 弘前大学, 農学生命科学部, 教授 2009 – 2021: Hirosaki University, 農学生命科学部, 准教授
Review Section/Research Field	Principal Investigator Evolutionary biology / Basic Section 45020:Evolutionary biology-related / Constructive Systems Biology / Evolutionary biology Except Principal Investigator Medium-sized Section 61:Human informatics and related fields / Plant pathology
Keywords	Principal Investigator 大腸菌 / 実験進化 / RNAバクテリオファージ / RNAバクテリオファージQβ / バクテリオファージ / バクテリオファージQβ / 共進化 / RNAワールド仮説 / 合成生物学 / RNA バクテリオファージQβ … More / 寄生 / 共存 / 共生 / 高温適応 / 適応進化 / 感染抵抗性 / 実験室内進化系 / Ｆ繊毛 / 実験進化学 / Qβファージ … More Except Principal Investigator 全トラッキング / テトラヒメナ / 集団知 / アリ / 個性の進化 / ウェブデータ / 社会性動物 / RNAseq / 進化 / 創発 / アリの集団 / 機械学習 / 情報理論 / ウェブサービス / ミツバチ / 生物集団 / 全個体トラッキング / アミメアリ / セイヨウミツバチ / 表現型のゆらぎ / バイオインフォマティクス / 次世代シークエンス解析 / マクロアレイ診断 / 微生物多様性 / 病害抑制 / リンゴ葉圏微生物 / 病害虫発生抑制 / 自然栽培 / 大規模塩基配列解析 / 根圏微生物 / 葉圏微生物 Less

大腸菌を用いたDNAレプリコンとRNAレプリコン共存系構築とその共進化過程の解明Principal Investigator
- Principal Investigator
  
  柏木明子
- Project Period (FY)
  2024 – 2027
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 45020:Evolutionary biology-related
- Research Institution
  Hirosaki University
Community First Theory: A theory and experiments on Evolution of Individuality, Diversity and Spontaneity
- Principal Investigator
  
  池上高志
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 61:Human informatics and related fields
- Research Institution
  The University of Tokyo
Analysis of Emerging Super-Organisms by Large-scale Tracking Experiments and Developing a New Theory of Collective Intelligence
- Principal Investigator
  
  Ikegami Takashi
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Review Section
  
  Medium-sized Section 61:Human informatics and related fields
- Research Institution
  The University of Tokyo
The study of transition and development from parasitism to symbiosis by model ecosystem of Escherichia coli and lytic phagePrincipal Investigator
- Principal Investigator
  
  KASHIWAGI AKIKO
- Project Period (FY)
  2016 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Constructive Systems Biology
- Research Institution
  Hirosaki University
Thermal adaptation mechanism of RNA bacteriophage QbPrincipal Investigator
- Principal Investigator
  
  Kashiwagi Akiko
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Evolutionary biology
- Research Institution
  Hirosaki University
Characterization of a Escherichia coli strain that evolved in an experimental coevolution systemPrincipal Investigator
- Principal Investigator
  
  KASHIWAGI AKIKO
- Project Period (FY)
  2011 – 2013
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Evolutionary biology
- Research Institution
  Hirosaki University
Large scale sequencing analysis of microbial diversity in phyllo-and rhizo-sphares of apple trees for investigation of the mechanism to acquire natural immunity under natural farming practices
- Principal Investigator
  
  SANO Teruo
- Project Period (FY)
  2010 – 2011
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Plant pathology
- Research Institution
  Hirosaki University
Analysis of bacteriophage Qβ genome evolution in an experimental coevolution systemPrincipal Investigator
- Principal Investigator
  
  KASHIWAGI Akiko
- Project Period (FY)
  2009 – 2010
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Evolutionary biology
- Research Institution
  Hirosaki University

[Journal Article] Revealing Gene Expression Heterogeneity in a Clonal Population of Tetrahymena thermophila through Single-Cell RNA Sequencing2024
- Author(s)
  Hiroki Kojima, Akiko Kashiwagi and Takashi Ikegami
- Journal Title
  
  Biochemistry and Biophysics Reports
  
  Volume: 38 Pages: 101720-101720
- DOI
  10.1016/j.bbrep.2024.101720
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21H04885
[Journal Article] Complete genomic sequence of the Pseudomonas lactis bacteriophage HU1 isolated from raw cow’s milk2020
- Author(s)
  Chikage Tanaka, Takahiro Nakayama, Takahiro Toba, and Akiko Kashiwagi
- Journal Title
  
  Archives of Virology
  
  Volume: 165 Issue: 1 Pages: 215-217
- DOI
  10.1007/s00705-019-04423-6
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16KT0169
[Journal Article] フラスコの中で変異と選択を繰り返す実験進化2020
- Author(s)
  柏木　明子
- Journal Title
  
  日本農芸化学会誌　化学と生物
  
  Volume: 4 Pages: 202-202
- Data Source
  KAKENHI-PROJECT-16KT0169
[Journal Article] The single-stranded RNA bacteriophage Qβ adapts rapidly to high temperatures: an evolution experiment2020
- Author(s)
  Md. Tanvir Hossain, Toma Yokono and Akiko Kashiwagi
- Journal Title
  
  Viruses
  
  Volume: 12 Issue: 6 Pages: 638-638
- DOI
  10.3390/v12060638
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16KT0169
[Journal Article] Influence of adaptive mutations from thermal adaptation experiment on infection cycle of　RNA bacteriophage Qβ2018
- Author(s)
  Akiko Kashiwagi, Tamami Kadoya, Naoya Kumasaka, Tomofumi Kumagai, Fumie Sano Tsushima, Tetsuya Yomo
- Journal Title
  
  Archives of Virology
  
  Volume: accepted
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16KT0169
[Journal Article] A lytic bacteriophage for controlling Pseudomonas lactis in raw cow’s milk2018
- Author(s)
  Chikage Tanaka, Kohsuke Yamada, Honami Takeuchi, Yoshio Inokuchi, Akiko Kashiwagi, and Takahiro Toba
- Journal Title
  
  Applied and Environmental Microbiology
  
  Volume: 84 Issue: 18
- DOI
  10.1128/aem.00111-18
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16KT0169
[Journal Article] Characterization of a single mutation in TraQ in a strain of Escherichia coli partially resistant to Qβ infection2015
- Author(s)
  Akiko Kashiwagi, Hikari Kitamura, Fumie Sano Tsushima
- Journal Title
  
  Frontiers in Microbiology
  
  Volume: 6 Pages: 124-124
- DOI
  10.3389/fmicb.2015.00124
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26440194
[Journal Article] Adaptation of a Cyanobacterium to a Biochemically Rich Environment in Experimental Evolution as an Initial Step toward a Chloroplast-Like State2014
- Author(s)
  Hosoda, K., Habuchi, M., Suzuki, S., Miyazaki, M., Takikawa, G., Sakurai, T., Kashiwagi, A., Sueyoshi, M., Matsumoto, Y., Kiuchi, A., Mori, K., Yomo, T.
- Journal Title
  
  Plos One
  
  Volume: 9(5) Issue: 5 Pages: e98337-e98337
- DOI
  10.1371/journal.pone.0098337
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-25650147, KAKENHI-PROJECT-26440194
[Journal Article] Contribution of silent mutations to thermal adaptation of RNA bacteriophage Qβ2014
- Author(s)
  Akiko Kashiwagi, Ryu Sugawara, Fumie Sano Tsushima, Tomofumi Kumagai, and Tetsuya Yomo
- Journal Title
  
  Journal of Virology
  
  Volume: 88 Issue: 19 Pages: 11459-11468
- DOI
  10.1128/jvi.01127-14
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-26440194
[Journal Article]2012
- Author(s)
  Tomonori Inomata, Hitomi Kimura, Haruki Hayasaka, Akinori Shiozaki, Yasuhiro Fujita, and Akiko Kashiwagi
- Journal Title
  
  Archives of Virology
  
  Volume: Vol.157(11) Pages: 2163-2169
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23570268
[Journal Article] Quantitative comparison of the RNA bacteriophage Qβ life cycle in rich and minimal media2012
- Author(s)
  Tomonori Inomata, Hitomi Kimura, Haruki Hayasaka, Akinori Shiozaki, Yasuhiro Fujita, Akiko Kashiwagi
- Journal Title
  
  Archives of Virology
  
  Volume: 157 Issue: 11 Pages: 2163-2169
- DOI
  10.1007/s00705-012-1419-3
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23570268
[Journal Article] Adaptation by stochastic switching of a monostable genetic circuit in Escherichia coli2011
- Author(s)
  Tsuru, et al
- Journal Title
  
  Mol Syst Biol
  
  Volume: Vol.7 e493 Issue: 1 Pages: 493-493
- DOI
  10.1038/msb.2011.24
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22657059, KAKENHI-PROJECT-23570268, KAKENHI-PROJECT-23570277
[Journal Article] PLoS ONE2011
- Author(s)
  Kazufumi Hosoda, Shingo Suzuki, Yoshinori Yamauchi, Yasunori Shiroguchi, Akiko Kashiwagi, Naoaki Ono, Kotaro Mori, Tetsuya Yomo
- Journal Title
  
  issue 2
  
  Volume: volume 6
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Journal Article]2011
- Author(s)
  Kotaro Mori, Akiko Kashiwagi, Tetsuya Yomo
- Journal Title
  
  The Journal of Eukaryotic Microbiology
  
  Volume: vol.58(1) Pages: 37-42
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Journal Article] Single-cell Isolation and Cloning of Tetrahymena thermophila Cells with a Fluorescence-activated Cell Sorter2011
- Author(s)
  Mori, K., Kashiwagi, A., Yomo, T.
- Journal Title
  
  The Journal of Eukaryotie Microbiology
  
  Volume: 58 Pages: 37-42
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Journal Article]2011
- Author(s)
  Kumiko Kihara, Kotaro Mori, Shingo Suzuki, Kazufumi Hosoda, Akito Yamada, Shin'ichi Matsuyama, Akiko Kashiwagi, Tetsuya Yomo
- Journal Title
  
  Bio Systems
  
  Volume: vol.13 Pages: 342-347
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Journal Article] Ongoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli2011
- Author(s)
  Akiko Kashiwagi and Tetsuya Yomo
- Journal Title
  
  PLoS Genetics
  
  Volume: 7
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23570268
[Journal Article]2011
- Author(s)
  Saburo Tsuru, Nao Yasuda, Yoshie Murakami, Junya Ushioda, Kotaro Mori, Akiko Kashiwagi, Shingo Suzuki, Bei-Wen Ying, and Tetsuya Yomo
- Journal Title
  
  Molecular Systems Biology
  
  Volume: Vol.7 Pages: 493-493
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23570268
[Journal Article] Probabilistic transition from unstable predator-prey interaction to stable coexistence of Dictyostelium discoideum and Escherichia coli2011
- Author(s)
  Kihara, K., Mori, K., Suzuki, S., Hosoda, K., Yamada, A., Matsuyama, S., Kashiwagi, A., Yomo, T.
- Journal Title
  
  BioSystems
  
  Volume: 13 Pages: 342-347
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Journal Article] Cooperative adaptation to establishment of a synthetic bacterial mutualism2011
- Author(s)
  Hosoda, K, Suzuki, S., Yamauchi, Y., Shiroguchi, Y., Kashiwagi, A., Ono, N., Mori, K., Yomo, T.
- Journal Title
  
  PLoS ONE
  
  Volume: 6
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Journal Article]2011
- Author(s)
  Akiko Kashiwagi and Tetsuya Yomo
- Journal Title
  
  PLoS Genetics
  
  Volume: Vol.7 (8)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23570268
[Journal Article] Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution2010
- Author(s)
  Kishimoto, T., Iijima, L., Tatsumi, M., Ono, N., Oyake, A., Hashimoto, T., Matsuo, M., Okubo, M., Suzuki, S., Mori, K., Kashiwagi, A., Furusawa, C, Ying, BW, Yomo, T.
- Journal Title
  
  PLoS Genetics
  
  Volume: 6
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Journal Article]2010
- Author(s)
  Toshihiko Kishimoto, Leo Iijima, Makoto Tatsumi, Naoaki Ono, Ayana Oyake, Tomomi Hashimoto, Moe Matsuo, Masato Okubo, Shingo Suzuki, Kotaro Mori, Akiko Kashiwagi, Chikara Furusawa, Bei-Wen Ying, Tetsuya Yomo
- Journal Title
  
  PLoS Genetics
  
  Volume: vol.6(10)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Journal Article] Noisy growth rate of cell size fluctuate protein concentration in bacteria2009
- Author(s)
  Saburo Tsuru, Junya Ichinose, Akiko Kashiwagi, Bei-Wen Ying, Kunihiko Kaneko, Tetsuya Yomo
- Journal Title
  
  Pysical Biology Vol.6
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Journal Article]2009
- Author(s)
  Saburo Tsuru, Junya Ichinose, Akiko Kashiwagi, Bei-Wen Ying, Kunihiko Kaneko, Tetsuya Yomo
- Journal Title
  
  Physical Biology
  
  Volume: vol.6
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] Investigating the heterogeneity and its heritability of Tetrahymena thermophila2024
- Author(s)
  Akiko Kashiwagi, Hiroki Kojima, Takashi Ikegami
- Organizer
  AROB-ISBC-SWARM 2024
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21H04885
[Presentation] Macro Vitality in Tetrahymena collectives2022
- Author(s)
  Akiko Kashiwagi
- Organizer
  AROB-ISBC-SWARM 2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21H04885
[Presentation] Macro Vitality in Tetrahymena collectives2022
- Author(s)
  Akiko Kashiwagi
- Organizer
  AROB-ISBC-SWARM2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21H04885
[Presentation] 実験室内進化系でのRNAファージQβの適応進化2021
- Author(s)
  柏木　明子
- Organizer
  第９４回日本細菌学会総会
- Invited
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] 微生物由来プラスマローゲンのラット小腸におけるリンパ吸収動態2021
- Author(s)
  佐藤　奈々, 金濱　晶, 柏木　明子，山田　美和, 西向　めぐみ
- Organizer
  日本農芸化学会　2021年度　仙台大会
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] The single-stranded RNA bacteriophage Qβ adapts rapidly to high temperature: an evolution experiment2020
- Author(s)
  Tanvir Md. Hossain, Toma Yokono, Akiko Kashiwagi
- Organizer
  第43回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] ラットにおけるSelenomonas ruminantium由来プラスマローゲンのリンパ吸収動態2020
- Author(s)
  金濱晶, 柏木明子，山田美和, 西向めぐみ
- Organizer
  日本農芸化学会　2020年度　福岡大会
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] 実験進化によるRNAウイルスの偽遺伝子への変異蓄積速度の評価2019
- Author(s)
  柏木明子
- Organizer
  日本進化学会第21回大会
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] 偏性嫌気性菌Selenomonas ruminantiumの大量培養条件検討とエーテル型リン脂質の合成2019
- Author(s)
  金濱晶、西向めぐみ、柏木明子、杉森大助、山田美和
- Organizer
  日本農芸化学会　2019年度東北支部大会
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] 長時間トラッキングによるテトラヒメナの遺伝と集団行動の解析2019
- Author(s)
  小島大樹、柏木明子、鈴木宏明、石川宏輔、池上高志
- Organizer
  日本進化学会第21回大会
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] 大腸菌内における放線菌由来ホスホリパーゼDの可溶化と精製2019
- Author(s)
  岩本学拓、伊東明乃、西向めぐみ、山田美和、柏木明子
- Organizer
  日本生物工学会　北日本支部　2019札幌シンポジウム
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] 宿主大腸菌の増殖速度上昇に寄与する寄生者Qβ由来RNA複製酵素の進化分子工学的改変2018
- Author(s)
  宮塚暢子、小林操妃、加藤美紗子、柏木明子
- Organizer
  日本進化学会第20回大会
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] RNAバクテリオファージQβのA2相補系でのゲノム変化2018
- Author(s)
  柏木明子
- Organizer
  第7回ファージ研究会
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] Rapid adaptation of RNA bacteriophage to environmental changes2017
- Author(s)
  Akiko Kashiwagi
- Organizer
  第55回日本生物物理学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] Characterization of a single mutation in TraQ in a strain of Escherichia coli partially resistant to Qβ infection2017
- Author(s)
  Akiko Kashiwagi, Hikari Kitamura, Fumie Sano Tsushima
- Organizer
  IUMS2017
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] 大腸菌の比増殖速度を指標とした高機能化QβRNA複製酵素取得系の構築2017
- Author(s)
  宮塚暢子、小林操妃、柏木明子
- Organizer
  2017年度日本生物工学会北日本支部福島シンポジウム
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] RNAバクテリオファージQβの適応進化実験で見られた複数経路での適応2017
- Author(s)
  柏木　明子、角谷　珠実、熊坂　直也、熊谷　知史、對馬（佐野）文恵
- Organizer
  日本進化学会　第１９回大会
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] A method of selecting aptamers against Potato Spindle Tuber Viroid (PSTVd)2016
- Author(s)
  M. S. Kaponi, A. Kashiwagi, and T. Sano
- Organizer
  RNA 2016
- Place of Presentation
  京都国際会議場
- Year and Date
  2016-06-28
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] QβファージのRNA複製酵素に依存する宿主増殖系の確立2016
- Author(s)
  柏木明子
- Organizer
  ファージ・環境ウイルス研究会　合同シンポジウム
- Place of Presentation
  JAMSTEC横須賀本部
- Year and Date
  2016-10-22
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] 実験室内進化系でのRNAファージQβの適応度進化2016
- Author(s)
  柏木　明子
- Organizer
  第39回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2016-12-02
- Invited
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] Rapid adaptation of RNA bacteriophage to environmental changes2016
- Author(s)
  Akiko Kashiwagi
- Organizer
  Integration of synthetic biology and systems biology of microbes
- Place of Presentation
  奈良先端科学技術大学院大学
- Year and Date
  2016-03-18
- Invited
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] Qβファージ感染に依存する宿主増殖系の確立2016
- Author(s)
  柏木明子
- Organizer
  日本進化学会第18回東京大会
- Place of Presentation
  東京工業大学
- Year and Date
  2016-08-25
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] Qβファージ感染に依存する宿主増殖系の確立2016
- Author(s)
  柏木明子
- Organizer
  日本進化学会第18回東京大会
- Place of Presentation
  東京工業大学
- Year and Date
  2016-08-25
- Data Source
  KAKENHI-PROJECT-16KT0169
[Presentation] 実験室内進化系でのRNAファージQβの適応度進化2016
- Author(s)
  柏木明子
- Organizer
  第39回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2016-12-02
- Invited
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] 微生物を用いたフラスコの中での実験進化2016
- Author(s)
  柏木　明子
- Organizer
  2015年度日本生物工学会北日本支部札幌シンポジウム
- Place of Presentation
  北海道大学
- Year and Date
  2016-03-26
- Invited
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] 高温適応変異体Qβファージの吸着速度定数の比較2016
- Author(s)
  角谷珠実、熊谷知史、熊坂直也、菅原竜、柏木明子
- Organizer
  ファージ・環境ウイルス研究会　合同シンポジウム
- Place of Presentation
  JAMSTEC横須賀本部
- Year and Date
  2016-10-21
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] QβファージのRNA複製酵素に依存する宿主増殖系の確立2016
- Author(s)
  柏木明子
- Organizer
  ファージ・環境ウイルス研究会　合同シンポジウム
- Place of Presentation
  JAMSTEC横須賀本部
- Year and Date
  2016-10-22
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] 実験室内進化系でのRNAバクテリオファージのゲノム変化2015
- Author(s)
  柏木　明子
- Organizer
  化学工学会　第47回秋季大会
- Place of Presentation
  北海道大学
- Year and Date
  2015-09-09
- Invited
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] 大腸菌を用いたバクテリオファージQβ由来RNA複製酵素の改良法確立2015
- Author(s)
  小林操妃、市橋伯一、四方哲也、柏木明子
- Organizer
  第22回日本生物工学会九州支部宮崎大会
- Place of Presentation
  宮崎大学
- Year and Date
  2015-12-05
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] PCR-DGGEによる市販牛乳中の細菌叢の分析2014
- Author(s)
  尚　暁敏、竹内保浪、高橋美里、柏木明子、戸羽隆宏
- Organizer
  日本畜産学会第118回大会
- Place of Presentation
  つくば国際会議場・研究交流センター
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation]2013
- Author(s)
  柏木明子,菅原竜,熊谷知史,對馬(佐野)文恵,熊坂直也,四方哲也
- Organizer
  第65回日本生物工学会大会
- Place of Presentation
  広島国際会議場(広島県)
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] 実験進化による高温適応RNAバクテリオファージQβの獲得とそのゲノム解析2013
- Author(s)
  柏木明子、菅原竜、熊谷知史、對馬(佐野)文恵、熊坂直也、四方哲也
- Organizer
  第65回日本生物工学会大会
- Place of Presentation
  広島国際会議場
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] RNAファージQβの高温適応実験進化におけるアミノ酸配列の変化を伴わない塩基置換の適応への貢献2013
- Author(s)
  柏木明子,　菅原　竜, 對馬（佐野）文恵, 熊谷知史, 四方哲也
- Organizer
  日本進化学会　第15回筑波大会
- Place of Presentation
  筑波大学
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation]2013
- Author(s)
  柏木明子,菅原竜,對馬(佐野)文恵,熊谷知史,四方哲也
- Organizer
  日本進化学会第15回筑波大会
- Place of Presentation
  筑波大学(茨城県)
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation]2012
- Author(s)
  Akiko Kashiwagi and Tetsuya Yomo
- Organizer
  日本進化学会第14回東京大会
- Place of Presentation
  首都大学東京(東京都)
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] 独立栄養から従属栄養に向けてのシアノバクテリアの実験進化2012
- Author(s)
  羽渕真清, 宮崎美賀子, 瀧川剛, 松本佑介, 末吉眞人, 木内あや子, 細田一史, 鈴木真吾, 柏木明子, 森光太郎, 四方哲也
- Organizer
  日本進化学会第14回東京大会
- Place of Presentation
  首都大学東京
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation]2012
- Author(s)
  菅原竜,對馬(佐野)文恵,熊谷知史,四方哲也,柏木明子
- Organizer
  第35回日本分子生物学会年会
- Place of Presentation
  福岡国際会議場・マリンメッセ福岡(福岡県)
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] 実験室内進化によって得られた高温適応バクテリオファージQβの変異解析2012
- Author(s)
  菅原竜, 對馬(佐野) 文恵, 熊谷知史, 四方哲也,柏木明子
- Organizer
  第35回日本分子生物学会年会
- Place of Presentation
  福岡国際会議場・マリンメッセ福岡
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] Co-evolution between a host and a pathogen2012
- Author(s)
  Akiko Kashiwagi & Tetsuya Yomo
- Organizer
  日本進化学会第14回東京大会
- Place of Presentation
  首都大学東京
- Invited
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] RNAバクテリオファージQβを用いた進化実験2012
- Author(s)
  柏木明子
- Organizer
  第4回ファージ研究会
- Place of Presentation
  群馬大学
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation]2011
- Author(s)
  Akiko Kashiwagi and Tetsuya Yomo
- Organizer
  International Union of Microbiological Societies 2011 Congress (IUMS 2011)
- Place of Presentation
  札幌コンベンションセンター(北海道)
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] 大腸菌とQβ RNAファージとのモデル共進化系における宿主と寄生者の全ゲノム変化解析2011
- Author(s)
  柏木　明子、四方　哲也
- Organizer
  日本生物工学会　第63回大会
- Place of Presentation
  東京農工大学
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation]2011
- Author(s)
  Akiko Kashiwagi and Tetsuya Yomo
- Organizer
  SMBE (Annual congerence of society for molecular biology and evolution)
- Place of Presentation
  京都大学(京都府)
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] Ongoing analysis of pehotypic and genomic changes in model coevolution system with Escherichia coli and bacteriophage Qβ2011
- Author(s)
  Akiko Kashiwagi and Tetsuya Yomo
- Organizer
  IUMS 2011
- Place of Presentation
  札幌コンベンションセンター
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] 大腸菌とRNAウイルスのモデル共進化系における宿主と寄生者のゲノム変化解析2011
- Author(s)
  柏木　明子、四方　哲也
- Organizer
  日本進化学会第13回大会
- Place of Presentation
  京都大学
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation]2011
- Author(s)
  菅原竜,四方哲也,柏木明子
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜(神奈川県)
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation]2011
- Author(s)
  柏木明子,四方哲也
- Organizer
  日本進化学会第13回大会
- Place of Presentation
  京都大学(京都府)
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] 大腸菌とQβファージのモデル共進化系におけるゲノム変化2011
- Author(s)
  柏木　明子、四方　哲也
- Organizer
  日本遺伝学会　第83回大会
- Place of Presentation
  京都大学
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] RNAバクテリオファージQβの高温適応系の構築2011
- Author(s)
  菅原竜、四方哲也、柏木明子
- Organizer
  第34回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation]2011
- Author(s)
  柏木明子,四方哲也
- Organizer
  日本遺伝学会第83回大会
- Place of Presentation
  京都大学(京都府)
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] Ongoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli2011
- Author(s)
  Akiko Kashiwagi & Tetsuya Yomo
- Organizer
  SMBE
- Place of Presentation
  京都大学
- Data Source
  KAKENHI-PROJECT-23570268
[Presentation] テトラヒメナと大腸菌の人工共生系における個体群動態2010
- Author(s)
  末吉眞人、松本佑介、森光太郎、柏木明子、細田一史、四方哲也
- Organizer
  日本生態学会第57回大会
- Place of Presentation
  東京大学
- Year and Date
  2010-03-17
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 2種類の大腸菌株による人工栄養共生系の実験進化2010
- Author(s)
  浅尾晃央、細田一史、森光太郎、柏木明子、山内義教、城口泰典、鈴木真吾、四方哲也
- Organizer
  日本生態学会第57回大会
- Place of Presentation
  東京大学
- Year and Date
  2010-03-17
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 実験室内進化系を用いたRNAウイルスの共進化過程解析系の構築と解析2010
- Author(s)
  柏木明子、四方哲也
- Organizer
  第62回日本生物工学会
- Place of Presentation
  ワールドコンベンションセンターサミットフェニックス・シーガイア・リゾート(宮崎県山崎町浜山)
- Year and Date
  2010-10-28
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 大腸菌とバクテリオファージQβを用いた実験室内共培養系における寄生者の宿主特異性の変化2010
- Author(s)
  柏木明子、四方哲也
- Organizer
  第12回日本進化学会大会
- Place of Presentation
  東京都東京工業大学
- Year and Date
  2010-08-03
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 第12回日本進化学会大会2010
- Author(s)
  柏木明子、四方哲也
- Place of Presentation
  東京工業大学大岡山キャンパス
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 実験室内共進化系でのバクテリオファージQβのゲノム進化2010
- Author(s)
  柏木明子、四方哲也
- Organizer
  日本遺伝学会第82回大会
- Place of Presentation
  札幌市北海道大学
- Year and Date
  2010-09-20
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 日本遺伝学会第82回大会2010
- Author(s)
  柏木明子、四方哲也
- Organizer
  日本遺伝学会
- Place of Presentation
  北海道大学(札幌市)
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] On-going analysis of experimental coevolution system with E.coli and RNA bacteriophage Qβ2010
- Author(s)
  Akiko Kashiwagi
- Organizer
  RCCSB (Research Center for Complex Systems Biology) symposium on cellular biophysics
- Place of Presentation
  東京都東京大学
- Year and Date
  2010-12-08
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] ワールドコンベンションセンターサミット2010
- Author(s)
  柏木明子、四方哲也
- Organizer
  第62回日本生物工学会
- Place of Presentation
  フェニックス・シーガイア・リゾート(宮崎県山崎町浜山)
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 栄養枯渇に対する適応応答における遺伝子発現の多様性の役割2009
- Author(s)
  津留三良、インベイウェン、森光太郎、潮田純弥、柏木明子、四方哲也
- Organizer
  日本進化学会
- Place of Presentation
  北海道大学
- Year and Date
  2009-09-03
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] Cooperative and adaptive phenotypic plasticity observed in a synthetic mutualism composed of two auxotrophs of Escherichia coli2009
- Author(s)
  細田一史、森光太郎、柏木明子、鈴木真吾、四方哲也
- Organizer
  日本生物物理学会
- Place of Presentation
  徳島文理大学
- Year and Date
  2009-10-30
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] Adaptive response of a Gene Network to Environmental Changes by Fitness-induced Attractor Selection2009
- Author(s)
  柏木明子
- Organizer
  International Symposium on COMPLEX SYSTEMS BIOLOGY
- Place of Presentation
  東京大学
- Year and Date
  2009-09-29
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 大腸菌と溶菌性RNAバクテリオファージQβの実験室内共培養系における個体群動態とRNAバクテリオファージ集団のゲノム塩基配列変化2009
- Author(s)
  柏木明子、四方哲也
- Organizer
  日本進化学会
- Place of Presentation
  北海道大学
- Year and Date
  2009-09-03
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 第11回日本進化学会大会(札幌大会)2009
- Author(s)
  柏木明子、四方哲也
- Place of Presentation
  北海道大学高等教育機能開発総合センター
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] Analysis of adaptive gene expression to nutrient depletion out of native regulatory mechanisms2009
- Author(s)
  津留三良、インベイウェン、森光太郎、潮田純弥、柏木明子、四方哲也
- Organizer
  International Symposium on COMPLEX SYSTEMS BIOLOGY
- Place of Presentation
  東京大学
- Year and Date
  2009-09-29
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 大腸菌の人工相利共生系で観察される協力的表現型変化2009
- Author(s)
  細田一史、森光太郎、鈴木真吾、柏木明子、四方哲也
- Organizer
  第19回日本数理生物学会大会
- Place of Presentation
  東京大学
- Year and Date
  2009-09-09
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 2種の大腸菌変異株による人工栄養共生系で観察される適応的表現型変化2009
- Author(s)
  細田一史、鈴木真吾、柏木明子、森光太郎、山内義教、城口泰典、四方哲也
- Organizer
  第25回個体群生態学会
- Place of Presentation
  同志社大学
- Year and Date
  2009-10-17
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] International Symposium on COMPLEX SYSTEMS BIOLOGY2009
- Author(s)
  Akiko Kashiwagi
- Place of Presentation
  The University of Tokyo, Hongo Campus
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] アミノ酸枯渇に対する適応的な遺伝子発現2009
- Author(s)
  津留三良、インベイウェン、森光太郎、潮田純弥、柏木明子、四方哲也
- Organizer
  「細胞を創る」研究会2.0
- Place of Presentation
  東京大学
- Year and Date
  2009-10-01
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] Adaptive phenotypic change in a synthetic ecosystem composed of two strains of Escherichia coil2009
- Author(s)
  細田一史、城口泰典、山内義教、森光太郎、鈴木真吾、柏木明子、四方哲也
- Organizer
  International Symposium on COMPLEX SYSTEMS BIOLOGY
- Place of Presentation
  東京大学
- Year and Date
  2009-09-29
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] Construction of Escherichia coil Gene Expression Level Perturbation Collection2009
- Author(s)
  Akiko Kashiwagi, Takahiro Sakurai, Saburo Tsuru, Bei-Wen Ying, Kotaro Mori, Tetsuya Yomo
- Organizer
  APBioChEC'09
- Place of Presentation
  神戸国際会議場
- Year and Date
  2009-11-24
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] APBioChEC’092009
- Author(s)
  Akiko Kashiwagi, Takahiro Sakurai, Saburo Tsuru, Bei-Wen Ying, Kotaro Mori, Tetsuya Yomo
- Place of Presentation
  Kobe, JAPAN
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] Stochastic gene expression induced population selection promotes adaptation to nutrient depletion2009
- Author(s)
  津留三良、インベイウェン、森光太郎、潮田純弥、柏木明子、四方哲也
- Organizer
  日本生物物理学会
- Place of Presentation
  徳島文理大学
- Year and Date
  2009-10-30
- Data Source
  KAKENHI-PROJECT-21770255
[Presentation] 高温での増幅率が異なる変異型Qβファージの粒子耐熱性に関する研究
- Author(s)
  熊谷知史, 菅原竜, 對馬文恵, 柏木明子
- Organizer
  第5回ファージ研究会
- Place of Presentation
  三重大学
- Year and Date
  2014-09-04 – 2014-09-05
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] Qβファージの高温適応実験進化におけるアミノ酸配列を変えない点変異の役割
- Author(s)
  柏木明子, 菅原竜, 對馬文恵, 熊谷知史, 四方哲也
- Organizer
  第5回ファージ研究会
- Place of Presentation
  三重大学
- Year and Date
  2014-09-04 – 2014-09-05
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] Qβファージと大腸菌の実験室内共進化で得られた部分抵抗性大腸菌のtraA遺伝子発現について
- Author(s)
  北村光, 對馬文恵, 柏木明子
- Organizer
  第5回ファージ研究会
- Place of Presentation
  三重大学
- Year and Date
  2014-09-04 – 2014-09-05
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] Role of silent mutations in adaptation of RNA bacteriophage to inhibitory environment
- Author(s)
  Kashiwagi, A., Sugawara, R., Tsushima, F., Kumagai, T., Yomo, T.
- Organizer
  IUMS2014
- Place of Presentation
  モントリオール　（カナダ）
- Year and Date
  2014-07-27 – 2014-08-01
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] 寄生者の遺伝子産物に依存する宿主増殖系の確立
- Author(s)
  柏木明子, 塚田幸治, 四方哲也
- Organizer
  日本進化学会第16回大会
- Place of Presentation
  高槻現代劇場　（大阪府）
- Year and Date
  2014-08-21 – 2014-08-24
- Data Source
  KAKENHI-PROJECT-26440194
[Presentation] RNAファージQβの高温での増殖に影響を及ぼす変異の解析
- Author(s)
  熊坂直也, 菅原竜, 對馬文恵, 柏木明子
- Organizer
  第5回ファージ研究会
- Place of Presentation
  三重大学
- Year and Date
  2014-09-04 – 2014-09-05
- Data Source
  KAKENHI-PROJECT-26440194

1. Ikegami Takashi (10211715)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
2. 橋本康弘 (10376494)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
3. 土畑重人 (50714995)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
4. SANO Teruo (30142699)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. TANEDA Akito (70332492)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. チャンユーチャン (50831484)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 細田一史

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Kashiwagi Akiko 柏木 明子

KASHIWAGI Akiko 柏木 明子

Research Projects

Research Products

Co-Researchers

大腸菌を用いたDNAレプリコンとRNAレプリコン共存系構築とその共進化過程の解明Principal Investigator

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Community First Theory: A theory and experiments on Evolution of Individuality, Diversity and Spontaneity

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Analysis of Emerging Super-Organisms by Large-scale Tracking Experiments and Developing a New Theory of Collective Intelligence

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The study of transition and development from parasitism to symbiosis by model ecosystem of Escherichia coli and lytic phagePrincipal Investigator

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Thermal adaptation mechanism of RNA bacteriophage QbPrincipal Investigator

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Characterization of a Escherichia coli strain that evolved in an experimental coevolution systemPrincipal Investigator

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Large scale sequencing analysis of microbial diversity in phyllo-and rhizo-sphares of apple trees for investigation of the mechanism to acquire natural immunity under natural farming practices

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Analysis of bacteriophage Qβ genome evolution in an experimental coevolution systemPrincipal Investigator

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[Journal Article] Revealing Gene Expression Heterogeneity in a Clonal Population of Tetrahymena thermophila through Single-Cell RNA Sequencing2024

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[Journal Article] Complete genomic sequence of the Pseudomonas lactis bacteriophage HU1 isolated from raw cow’s milk2020

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[Journal Article] フラスコの中で変異と選択を繰り返す実験進化2020

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[Journal Article] The single-stranded RNA bacteriophage Qβ adapts rapidly to high temperatures: an evolution experiment2020

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[Journal Article] Influence of adaptive mutations from thermal adaptation experiment on infection cycle of RNA bacteriophage Qβ2018

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[Journal Article] A lytic bacteriophage for controlling Pseudomonas lactis in raw cow’s milk2018

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Kashiwagi Akiko 柏木明子

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[Journal Article] Influence of adaptive mutations from thermal adaptation experiment on infection cycle of　RNA bacteriophage Qβ2018