Terashi Genki 寺師玄記

… Alternative Names

寺師玄記テラシゲンキ

TERASHI Genki 寺師玄記

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Researcher Number	40383658
Other IDs
Affiliation (Current)	2025: 北里大学, 薬学部, 講師
Affiliation (based on the past Project Information) *help	2014 – 2016: 北里大学, 薬学部, 講師 2011: 北里大学, 薬学部, 講師 2010: 北里大学, 薬学部, 助教 2007: Kitasato University, School of Pharmacy, Assistant Professor 2006: 北里大学, 薬学部, 助手
Review Section/Research Field	Principal Investigator Life / Health / Medical informatics / Bioinformatics/Life informatics Except Principal Investigator Applied genomics
Keywords	Principal Investigator タンパク質間相互作用 / 残基間ネットワーク / 残基幹ネットワーク / アミノ酸残基 / アミノ酸残基間ネットワーク / 構造アライメント / タンパク質三次元構造 / 構造比較 / 立体構造アライメント / タンパク質立体構造 / バイオインフォマティクス / 生体生命情報学 … More Except Principal Investigator … More Protein / Mouse / Rat / Database / Critical Assessment / Interaction / Structure Prediction / Complex / CAPRI / CASP / FAMS / マウス / ラット / データベース / タンパク質 Less

A Flexible Protein Structure Alignment Method Based on the Residue-Residue network comparisonPrincipal Investigator
- Principal Investigator
  
  Terashi Genki
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Kitasato University
Analysis of Protein-protein interactions and development of protein-protein docking methodPrincipal Investigator
- Principal Investigator
  
  TERASHI Genki
- Project Period (FY)
  2010 – 2011
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Kitasato University
Construction of Database of Rat and Mouse Genes for Three Dimensional Monomer and Complex Protein Structure
- Principal Investigator
  
  UMEYAMA Hideaki
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Applied genomics
- Research Institution
  Kitasato University

All 2016 2015 2014 2012 2011 2010 2008 2007 Other

All Journal Article Presentation

[Journal Article] CAB-Align: A Flexible Protein Structure Alignment Method Based on the Residue-Residue Contact Area2015
- Author(s)
  Genki Terashi, Mayuko Takeda-Shitaka
- Journal Title
  
  PLoS ONE
  
  Volume: 10 Issue: 10 Pages: e0141440-e0141440
- DOI
  10.1371/journal.pone.0141440
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-26730151
[Journal Article] A Protein Three-Dimensional Substructure Search Program Based on the Lower Bound of a Root Mean Square Deviation Value2012
- Author(s)
  Terashi G, Shibuya T, Takeda-Shitaka M
- Journal Title
  
  Journal of computational biology
  
  Volume: 19(5) Issue: 5 Pages: 493-503
- DOI
  10.1089/cmb.2011.0230
- URL
  http://online.liebertpub.com/doi/abs/10.1089/cmb.2011.0230
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22700314, KAKENHI-PLANNED-24106007
[Journal Article] Bioinformatics based ligand-docking and in-silico screening2008
- Author(s)
  Daisuke Takaya, Mayuko Taked a-Shitaka, Genki Terashi, Kazuhiko Kanou, Mitsuo Iwadate and Hideaki Umeyama
- Journal Title
  
  Chem.Pharm.Bull 56(5)(In press)
- NAID
  110006664006
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18310139
[Journal Article] 計算科学によるタンパク質問相互作用解析2007
- Author(s)
  竹田-志鷹真由子, 寺師玄記, 梅山秀明
- Journal Title
  
  生命の科学 58(5)
  
  Pages: 338-341
- Data Source
  KAKENHI-PROJECT-18310139
[Journal Article] Fams-ace:a combined method to select the best model after remodeling all server models2007
- Author(s)
  Terashi G, Takeda-Shitaka M
- Journal Title
  
  Proteins 69
  
  Pages: 98-107
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18310139
[Journal Article] Protein Structure Prediction in Structure Based Drug Design2007
- Author(s)
  Takeda-Shitaka M., Terashi G., Chiba C., Takaya D., Umeyama H.
- Journal Title
  
  Medicinal Chmistry 2
  
  Pages: 191-201
- Data Source
  KAKENHI-PROJECT-18310139
[Journal Article] Fams-ace:a combined method to select the best model after remodeling all server models2007
- Author(s)
  Terashi G, Takeda-Shitaka M, Kanou K, Iwadate M, Takaya D, Hosoi A, Ohta K, Umeyama H
- Journal Title
  
  Proteins 69
  
  Pages: 98-107
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18310139
[Journal Article] The SKE-DOCK server and human teams based on a combined method of shape complementarity and free energy estimation2007
- Author(s)
  Genki Terashi, Mayuko Takeda-Shitaka, Kazuhiko Kanou, Mitsuo Iwadate, Daisuke Takaya, Hideaki Umeyama.
- Journal Title
  
  Proteins 69(4)
  
  Pages: 866-872
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18310139
[Journal Article] The SKE-DOC K server and human teams based on a combined meth od of shape complementarity and free energy estimatio n2007
- Author(s)
  Genki, Terashi, Mayuko, Takeda-Shitaka
- Journal Title
  
  Proteins 69(4)
  
  Pages: 866-872
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18310139
[Journal Article] Fams-ace : a co mbined method to select the best model after remodeling all server models2007
- Author(s)
  Genki, Terashi, Mayuko, Takeda-Shitaka
- Journal Title
  
  Proteins 69
  
  Pages: 98-107
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-18310139
[Journal Article] The SKE-DOCK server and human teams based on a combined method of shape complementarity and free energy estimation2007
- Author(s)
  Genki Terashi, Mayuko Takeda-Shitaka
- Journal Title
  
  Proteins 69(4)
  
  Pages: 866-872
- Description
  「研究成果報告書概要(和文)」より
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18310139
[Presentation] CAB-align: Novel protein structure alignment method based on the residue-residue contact area2016
- Author(s)
  Genki Terashi, Daisuke Kihara, Mayuko Takeda-Shitaka
- Organizer
  ISMB2016 satellite meeting, 3DSIG 2016
- Place of Presentation
  米国フロリダ州オーランド
- Year and Date
  2016-07-08
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26730151
[Presentation] Flexible protein structure alignment method based on the residue-residue interaction2015
- Author(s)
  Genki Terashi, Mayuko Takeda-Shitaka
- Organizer
  Great Lakes Bioinformatics Conference 2015
- Place of Presentation
  Purdue University, West Lafayette, Indiana, U.S
- Year and Date
  2015-05-18
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26730151
[Presentation] 残基間相互作用に基づく新たなタンパク質構造アライメント法の開発2014
- Author(s)
  寺師玄記
- Organizer
  第42回構造活性相関シンポジウム
- Place of Presentation
  熊本県熊本市　くまもと森都心プラザ
- Year and Date
  2014-11-14
- Data Source
  KAKENHI-PROJECT-26730151
[Presentation] LB3D : Fast protein 3D substructure search program2011
- Author(s)
  寺師玄記
- Organizer
  2011年日本バイオインフォマティクス学会年会
- Place of Presentation
  神戸
- Year and Date
  2011-12-08
- Data Source
  KAKENHI-PROJECT-22700314
[Presentation] LB3D : Fast protein 3D substructure search program2011
- Author(s)
  寺師玄記
- Organizer
  日本バイオインフォマティクス学会2011年会
- Place of Presentation
  神戸国際会議場
- Year and Date
  2011-11-08
- Data Source
  KAKENHI-PROJECT-22700314
[Presentation] タンパク質間相互作用予測プログラムの開発と応用2010
- Author(s)
  寺師玄記
- Organizer
  第23回北里バイオサイエンスフォーラム
- Place of Presentation
  青森県十和田
- Year and Date
  2010-08-06
- Data Source
  KAKENHI-PROJECT-22700314
[Presentation] タンパク質モデリングと生物分子設計2007
- Author(s)
  岩舘満雄、加納和彦、寺師玄記、高谷大輔、竹田-志鷹真由子、梅山秀明
- Organizer
  BMB2007第30回日本分子生物学会年会、第80回日本生化学会大会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2007-12-15
- Data Source
  KAKENHI-PROJECT-18310139
[Presentation]2007
- Author(s)
  竹田-志鷹真由子、寺師玄記、加納和彦、岩舘満雄、高谷大輔、酒井博子、梅山秀明
- Organizer
  第35回構造活性相関シンポジウム
- Place of Presentation
  京都大学百周年記念ホール
- Year and Date
  2007-11-16
- Data Source
  KAKENHI-PROJECT-18310139
[Presentation] Novel protein structure alignment method based on the inter-residue contact area
- Author(s)
  寺師玄記
- Organizer
  JSBi2014・第3回生命医薬情報学連合大会
- Place of Presentation
  宮城県仙台市　仙台国際センター
- Year and Date
  2014-10-02 – 2014-10-04
- Data Source
  KAKENHI-PROJECT-26730151

1. UMEYAMA Hideaki (20050619)

# of Collaborated Projects: 1 results

# of Collaborated Products: 7 results
2. TAKEDA Mayuko (70265718)

# of Collaborated Projects: 1 results

# of Collaborated Products: 11 results
3. IWADATE Mitsuo (10327447)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
4. KANOU Kazuhiko (00383654)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results

Terashi Genki 寺師 玄記

寺師 玄記 テラシ ゲンキ

TERASHI Genki 寺師 玄記

Research Projects

Research Products

Co-Researchers

A Flexible Protein Structure Alignment Method Based on the Residue-Residue network comparisonPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Analysis of Protein-protein interactions and development of protein-protein docking methodPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Construction of Database of Rat and Mouse Genes for Three Dimensional Monomer and Complex Protein Structure

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] CAB-Align: A Flexible Protein Structure Alignment Method Based on the Residue-Residue Contact Area2015

Author(s)

Journal Title

DOI

Data Source

[Journal Article] A Protein Three-Dimensional Substructure Search Program Based on the Lower Bound of a Root Mean Square Deviation Value2012

Author(s)

Journal Title

DOI

URL

Data Source

[Journal Article] Bioinformatics based ligand-docking and in-silico screening2008

Author(s)

Journal Title

NAID

Data Source

[Journal Article] 計算科学によるタンパク質問相互作用解析2007

Author(s)

Journal Title

Data Source

[Journal Article] Fams-ace:a combined method to select the best model after remodeling all server models2007

Author(s)

Journal Title

Description

Data Source

[Journal Article] Protein Structure Prediction in Structure Based Drug Design2007

Author(s)

Journal Title

Data Source

[Journal Article] Fams-ace:a combined method to select the best model after remodeling all server models2007

Author(s)

Journal Title

Data Source

[Journal Article] The SKE-DOCK server and human teams based on a combined method of shape complementarity and free energy estimation2007

Author(s)

Journal Title

Data Source

[Journal Article] The SKE-DOC K server and human teams based on a combined meth od of shape complementarity and free energy estimatio n2007

Author(s)

Journal Title

Description

Data Source

[Journal Article] Fams-ace : a co mbined method to select the best model after remodeling all server models2007

Author(s)

Journal Title

Description

Data Source

[Journal Article] The SKE-DOCK server and human teams based on a combined method of shape complementarity and free energy estimation2007

Author(s)

Journal Title

Description

Data Source

[Presentation] CAB-align: Novel protein structure alignment method based on the residue-residue contact area2016

Author(s)

Organizer

Place of Presentation

Terashi Genki 寺師玄記

寺師玄記テラシゲンキ

TERASHI Genki 寺師玄記