nakano miki 中野美紀

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Nakano Miki 中野美紀

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Researcher Number	40625894
Other IDs
Affiliation (Current)	2025: 神戸大学, 大学教育推進機構, 助教
Affiliation (based on the past Project Information) *help	2020 – 2022: 国立研究開発法人理化学研究所, 計算科学研究センター, 研究員 2018 – 2019: 国立研究開発法人理化学研究所, 計算科学研究センター, 特別研究員
Review Section/Research Field	Principal Investigator Basic Section 43020:Structural biochemistry-related
Keywords	Principal Investigator Ｘ線自由電子レーザー / コンピューターシミュレーション / 生物物理 / 構造生物学 / 位相回復 / コヒーレントX線イメージング / 画像解析 / 単粒子解析 / X線自由電子レーザー

Image processing of the diffraction patterns and 3D reconstruction of biomolecules by XFEL single particle experimentPrincipal Investigator
- Principal Investigator
  
  Nakano Miki
- Project Period (FY)
  2018 – 2022
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 43020:Structural biochemistry-related
- Research Institution
  Institute of Physical and Chemical Research

All 2023 2022 2021 2020 2019 2018

All Journal Article Presentation

[Journal Article] Molecular size dependence on achievable resolution from XFEL single-particle 3D reconstruction2023
- Author(s)
  Miki Nakano, Osamu Miyashita, Florence Tama
- Journal Title
  
  Structural Dynamics
  
  Volume: 10 Issue: 2 Pages: 024101-024101
- DOI
  10.1063/4.0000175
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K14642, KAKENHI-PLANNED-20H05453
[Journal Article] Three-dimensional structure determination of gold nanotriangles in solution using X-ray free-electron laser single-particle analysis2022
- Author(s)
  Nakano Miki、Miyashita Osamu、Joti Yasumasa、Suzuki Akihiro、Mitomo Hideyuki、Niida Yoshiya、Yang Ying、Yumoto Hirokatsu、Koyama Takahisa、Tono Kensuke、Ohashi Haruhiko、Yabashi Makina、Ishikawa Tetsuya、BESSHO YOSHITAKA、Ijiro Kuniharu、Nishino Yoshinori、Tama Florence
- Journal Title
  
  Optica
  
  Volume: 9 Issue: 7 Pages: 776-784
- DOI
  10.1364/optica.457352
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H05433, KAKENHI-PROJECT-21K03497, KAKENHI-PROJECT-22K19908, KAKENHI-PROJECT-22K19929, KAKENHI-PUBLICLY-21H05863, KAKENHI-PROJECT-19H05627, KAKENHI-PROJECT-21H01736, KAKENHI-PROJECT-18K14642, KAKENHI-PLANNED-20H05453, KAKENHI-PUBLICLY-22H04741
[Journal Article] Parameter optimization for 3D-reconstruction from XFEL diffraction patterns based on Fourier slice matching2019
- Author(s)
  Miki Nakano, Osamu Miyashita and Florence Tama
- Journal Title
  
  Biophysics and Physicobiology
  
  Volume: 16 Issue: 0 Pages: 367-376
- DOI
  10.2142/biophysico.16.0_367
- NAID
  130007752746
- ISSN
  2189-4779
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] XFELを用いた単粒子解析で復元された分子構造の解像度における分サイズの影響2023
- Author(s)
  中野美紀、宮下治、タマフロハンス
- Organizer
  第36回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] Molecular size effect on the single-particle 3D structure reconstruction analysis using X-ray free electron laser2022
- Author(s)
  Miki Nakanoa, Osamu Miyashita and Florence Tama
- Organizer
  The 4th R-CCS International Symposium
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] X線自由電子レーザー単粒子解析を使用した溶液中の金ナノ粒子の三次元構造決定2022
- Author(s)
  中野美紀, 宮下治, 城地保昌, 鈴木明大, 西野吉則, Florence Tama
- Organizer
  第35回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] Molecular size effect on the single-particle analysis using X-ray free electron laser2022
- Author(s)
  Miki Nakano, Osamu Miyashita, Florence Tama
- Organizer
  The 60th Annual Meeting of the Biophysical Society of Japan
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] Simulation study of tree dimensional reconstruction of ribosome from Xray free electron laser diffraction patterns2021
- Author(s)
  Miki Nakano, Tama Florence, Miyashita Osamu
- Organizer
  20th Annual Meeting of the Protein Society Meeting of Japan
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] Requirement for 3D-reconstruction of biomolecule structure from single particle analysis using X-ray free electron laser diffraction images2021
- Author(s)
  Miki Nakano, Tama Florence, Miyashita Osamu
- Organizer
  The 3rd R-CCS International Symposium
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] Simulation study of 3D-reconstruction of biomolecule structure from X-ray free electron laser diffraction images2020
- Author(s)
  Miki Nakano, Osamu Miyashita, Florence Tama
- Organizer
  64th Annual Meeting of the Biophsical Society
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] XFEL単粒子解析による分子復元構造への回折パターンサイズの影響2020
- Author(s)
  Miki Nakano, Osamu Miyashita, Florence Tama
- Organizer
  日本物理学会第75回年次大会
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] シミュレーションデータによるX線自由電子レーザー回折像からの生体分子三次元構造の復元手法の検討2020
- Author(s)
  Miki Nakano, Osamu Miyashita, Florence Tama
- Organizer
  第33回日本放射光学会年会・放射光科学合同シンポジウム
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] Effect of binning size of XFEL diffraction patterns on the resolution of reconstructed 3D-molecular structure2019
- Author(s)
  Miki Nakano, Osamu Miyashita, Florence Tama
- Organizer
  Chem-Bio Informatics Society(CBI) Annual Meeting 2019
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] シミュレーションによるX線自由電子レーザー実験回折像からの巨大生体分子三次元構造再構築の定量的解析2019
- Author(s)
  Miki Nakano, Osamu Miyashita, Slavica Jonic, and Florence Tama
- Organizer
  第74回日本物理学会春季年会
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] Quantitative evaluation of the diffraction images for single particle analysis by X-ray free electron laser experiment2018
- Author(s)
  Miki Nakano, Osamu Miyashita, Slavica Jonic, and Florence Tama
- Organizer
  第56回日本生物物理学会年会
- Data Source
  KAKENHI-PROJECT-18K14642
[Presentation] Simulation study of 3D-reconstruction of large biomolecule from the diffraction images obtained by X-ray free electron laser experiment2018
- Author(s)
  Miki Nakano, Osamu Miyashita, Slavica Jonic, and Florence Tama
- Organizer
  Chem-Bio Informatics Society(CBI) Annual Meeting 2018
- Data Source
  KAKENHI-PROJECT-18K14642

1. 鈴木明大

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

nakano miki 中野 美紀

Nakano Miki 中野 美紀

Research Projects

Research Products

Co-Researchers

Image processing of the diffraction patterns and 3D reconstruction of biomolecules by XFEL single particle experimentPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Molecular size dependence on achievable resolution from XFEL single-particle 3D reconstruction2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Three-dimensional structure determination of gold nanotriangles in solution using X-ray free-electron laser single-particle analysis2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Parameter optimization for 3D-reconstruction from XFEL diffraction patterns based on Fourier slice matching2019

Author(s)

Journal Title

DOI

NAID

ISSN

Language

Data Source

[Presentation] XFELを用いた単粒子解析で復元された 分子構造の解像度における分サイズの影響2023

Author(s)

Organizer

Data Source

[Presentation] Molecular size effect on the single-particle 3D structure reconstruction analysis using X-ray free electron laser2022

Author(s)

Organizer

Data Source

[Presentation] X線自由電子レーザー単粒子解析を使用した 溶液中の金ナノ粒子の三次元構造決定2022

Author(s)

Organizer

Data Source

[Presentation] Molecular size effect on the single-particle analysis using X-ray free electron laser2022

Author(s)

Organizer

Data Source

[Presentation] Simulation study of tree dimensional reconstruction of ribosome from Xray free electron laser diffraction patterns2021

Author(s)

Organizer

Data Source

[Presentation] Requirement for 3D-reconstruction of biomolecule structure from single particle analysis using X-ray free electron laser diffraction images2021

Author(s)

Organizer

Data Source

[Presentation] Simulation study of 3D-reconstruction of biomolecule structure from X-ray free electron laser diffraction images2020

Author(s)

Organizer

Data Source

[Presentation] XFEL単粒子解析による分子復元構造への回折パターンサイズの影響2020

Author(s)

Organizer

Data Source

[Presentation] シミュレーションデータによるX線自由電子レーザー回折像からの生体分子三次元構造の復元手法の検討2020

Author(s)

Organizer

Data Source

[Presentation] Effect of binning size of XFEL diffraction patterns on the resolution of reconstructed 3D-molecular structure2019

Author(s)

Organizer

Data Source

[Presentation] シミュレーションによるX線自由電子レーザー実験回折像からの巨大生体分子三次元構造再構築の定量的解析2019

Author(s)

Organizer

Data Source

[Presentation] Quantitative evaluation of the diffraction images for single particle analysis by X-ray free electron laser experiment2018

Author(s)

Organizer

Data Source

[Presentation] Simulation study of 3D-reconstruction of large biomolecule from the diffraction images obtained by X-ray free electron laser experiment2018

Author(s)

Organizer

nakano miki 中野美紀

Nakano Miki 中野美紀

[Presentation] XFELを用いた単粒子解析で復元された分子構造の解像度における分サイズの影響2023

[Presentation] X線自由電子レーザー単粒子解析を使用した溶液中の金ナノ粒子の三次元構造決定2022