Fukuda Ikuo 福田育夫

Researcher Number	40643185
Other IDs
Affiliation (Current)	2025: 大阪公立大学, 大学院理学研究科 , 客員教授
Affiliation (based on the past Project Information) *help	2023: 大阪公立大学, 大学院理学研究科, 客員教授 2021 – 2022: 兵庫県立大学, 情報科学研究科, 特任教授 2018 – 2020: 兵庫県立大学, シミュレーション学研究科, 特任教授 2017: 大阪大学, たんぱく質研究所, 招へい准教授 2013 – 2015: 大阪大学, たんぱく質研究所, 招へい研究員(准教授)
Review Section/Research Field	Principal Investigator Basic Section 60100:Computational science-related / Computational science
Keywords	Principal Investigator サンプリング / 数値積分 / 運動方程式 / 力学系 / 相互作用計算 / 分子動力学 / 数値計算 / 数値シミュレーション / 計算科学

環境パラメタを分割変数型にした動力学と環境情報入力を最適化した分子相互作用計算Principal Investigator
- Principal Investigator
  
  福田育夫
- Project Period (FY)
  2023 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 60100:Computational science-related
- Research Institution
  Osaka Metropolitan University
A molecular dynamics method incorporating deeply interconnected parameter-varied dynamics and charge-distribution-dependent potential functionsPrincipal Investigator
- Principal Investigator
  
  Fukuda Ikuo
- Project Period (FY)
  2020 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 60100:Computational science-related
- Research Institution
  Osaka Metropolitan University
  University of Hyogo
Realization of variable molecular dynamics simulations by generalized cutoff method and double density dynamicsPrincipal Investigator
- Principal Investigator
  
  Fukuda Ikuo
- Project Period (FY)
  2017 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Computational science
- Research Institution
  University of Hyogo
  Osaka University
Development of fundamental methods for fast, accurate, and stable simulation of molecular dynamicsPrincipal Investigator
- Principal Investigator
  
  Fukuda Ikuo
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Computational science
- Research Institution
  Osaka University

All 2023 2022 2021 2020 2019 2018 2017 2016 2015 2014 2013 Other

All Journal Article Presentation Book

[Book] 長距離力をいかに精度よく効率的に見積もるか―零多重極子和法による静電相互作用計算―2017
- Author(s)
  福田育夫
- Total Pages
  7
- Publisher
  日本物理学会誌
- Data Source
  KAKENHI-PROJECT-17K05143
[Journal Article] A cutoff-based method with charge-distribution-data driven pair potentials for efficiently estimating electrostatic interactions in molecular systems.2023
- Author(s)
  Ikuo Fukuda, Kei Moritsugu, Junichi Higo, Yoshifumi Fukunishi.
- Journal Title
  
  J. Chem. Phys.
  
  Volume: 159 Issue: 23 Pages: 234116-234116
- DOI
  10.1063/5.0172270
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21K06052, KAKENHI-PROJECT-23K03344, KAKENHI-PROJECT-23K11134, KAKENHI-PROJECT-20K03883, KAKENHI-PROJECT-20K11854
[Journal Article] Non-Ewald Methods for Evaluating the Electrostatic Interactions of Charge Systems: Similarity and Difference2022
- Author(s)
  Ikuo Fukuda and Haruki Nakamura
- Journal Title
  
  Biophysical Reviews
  
  Volume: 14 Issue: 6 Pages: 1315-1340
- DOI
  10.1007/s12551-022-01029-2
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K11854
[Journal Article] On Ergodicity for Multi-Dimensional Harmonic Oscillator Systems with Nose--Hoover Type Thermostat2021
- Author(s)
  Ikuo Fukuda, Kei Moritsugu, and Yoshifumi Fukunishi
- Journal Title
  
  Regular and Chaotic Dynamics
  
  Volume: 26 Issue: 2 Pages: 183-204
- DOI
  10.1134/s1560354721020064
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K11854, KAKENHI-PROJECT-17K05143
[Journal Article] Flexibility and cell permeability of cyclic Ras-inhibitor peptides revealed by coupled Nose Hoover equation2021
- Author(s)
  Kei Moritsugu, Koh Takeuchi, Narutoshi Kamiya, Junichi Higo, Isao Yasumatsu, Yoshifumi Fukunishi and Ikuo Fukuda
- Journal Title
  
  Journal of Chemical Information and Modeling
  
  Volume: 61 Issue: 4 Pages: 1921-1930
- DOI
  10.1021/acs.jcim.0c01427
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K03883, KAKENHI-PROJECT-20K11854, KAKENHI-PROJECT-20K21494, KAKENHI-PROJECT-17K05143, KAKENHI-PROJECT-18H02393, KAKENHI-PROJECT-20H03229
[Journal Article] Analysis of multiple data sequences with different distributions: defining common principal component axes by ergodic sequence generation and multiple reweighting composition2021
- Author(s)
  Ikuo Fukuda and Kei Moritsugu
- Journal Title
  
  IOP SciNotes
  
  Volume: 2 Issue: 3 Pages: 035201-035201
- DOI
  10.1088/2633-1357/ac0ac2
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K11854
[Journal Article] A Robust, Symmetric Operator-Composition Integrator for the Berendsen Temperature-Control Molecular Dynamics Equation2020
- Author(s)
  I. Fukuda, S. Queyroy S, and H. Nakamura
- Journal Title
  
  J. Phys. Soc. Jpn.
  
  Volume: 89 Issue: 6 Pages: 064004-064004
- DOI
  10.7566/jpsj.89.064004
- NAID
  40022254134
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K05143
[Journal Article] Temperature--Energy-Space Sampling Molecular Dynamics: Deterministic and Single-Replica Method Utilizing Continuous Temperature System2020
- Author(s)
  Ikuo Fukuda and Kei Moritsugu
- Journal Title
  
  J. Phys. A: Math. Theor.
  
  Volume: 53 Issue: 37 Pages: 375004-375004
- DOI
  10.1088/1751-8121/aba027
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K11854, KAKENHI-PROJECT-17K05143
[Journal Article] Symmetric, Explicit Numerical Integrator for Molecular Dynamics Equations of Motion with a Generalized Friction2019
- Author(s)
  Ikuo Fukuda
- Journal Title
  
  J. Math. Phys.
  
  Volume: 60 Issue: 4 Pages: 042903-042903
- DOI
  10.1063/1.5012871
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K05143
[Journal Article] Enhanced Sampling of Molecular Dynamics Simulations of a Polyalanine Octapeptide: Effects of the Periodic Boundary Conditions on Peptide Conformation2018
- Author(s)
  Kasahara Kota、Sakuraba Shun、Fukuda Ikuo
- Journal Title
  
  The Journal of Physical Chemistry B
  
  Volume: 122 Issue: 9 Pages: 2495-2503
- DOI
  10.1021/acs.jpcb.7b10830
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K05143, KAKENHI-PROJECT-16K17778, KAKENHI-PROJECT-16K18526
[Journal Article] Performance Evaluation of the Zero-Multipole Summation Method in Modern Molecular Dynamics2018
- Author(s)
  Shun Sakuraba、Ikuo Fukuda
- Journal Title
  
  Journal of Computational Chemistry
  
  Volume: 印刷中
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K05143
[Journal Article] A critical appraisal of the zero-multipole method: Structural, thermodynamic, dielectrid, and dynamical properties of a water system2016
- Author(s)
  Wang H, Nakamura H, Fukuda I
- Journal Title
  
  Journal of Chemical Physics
  
  Volume: 144 Issue: 11 Pages: 114503-114503
- DOI
  10.1063/1.4943956
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-ORGANIZER-24118001, KAKENHI-PLANNED-24118008, KAKENHI-PROJECT-25390156
[Journal Article] Coupled Nose-Hoover equations of motion to implement a fluctuating heat-bath temperature2016
- Author(s)
  Ikuo Fukuda and Kei Moritsugu
- Journal Title
  
  Physics Reviews E
  
  Volume: 93 Issue: 3 Pages: 033306-033306
- DOI
  10.1103/physreve.93.033306
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15K18520, KAKENHI-PROJECT-25390156
[Journal Article] Double Density Dynamics: Realizing a joint distribution of a physical system and a parameter system2015
- Author(s)
  Ikuo Fukuda and Kei Moritsugu
- Journal Title
  
  Journal of Physics A: Mathematical and Theoretical
  
  Volume: 48 Issue: 45 Pages: 455001-455001
- DOI
  10.1088/1751-8113/48/45/455001
- NAID
  120005596269
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-25390156
[Journal Article] Development of New Non-Ewald Method in Molecular Dynamics Calculation2015
- Author(s)
  福田育夫
- Journal Title
  
  Seibutsu Butsuri
  
  Volume: 55 Issue: 1 Pages: 037-039
- DOI
  10.2142/biophys.55.037
- NAID
  130004794736
- ISSN
  0582-4052, 1347-4219
- Language
  Japanese
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25390156
[Journal Article] The Zero-multipole summation method for estimating electrostatic interactions in molecular dynamics : analysis of the accuracy and application to liquid systems2014
- Author(s)
  Fukuda I, Kamiya N, Nakamura H
- Journal Title
  
  J. Chem. Phys
  
  Volume: 140 Issue: 19 Pages: 194307-194307
- DOI
  10.1063/1.4875693
- NAID
  120005596268
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23370071, KAKENHI-ORGANIZER-24118001, KAKENHI-PLANNED-24118008, KAKENHI-PROJECT-25390156, KAKENHI-PROJECT-25440070
[Journal Article] A Novel Approach of Dynamic Cross Correlation Analysis on Molecular Dynamics Simulations and its Application to Ets1 dimer–DNA Complex2014
- Author(s)
  Kota Kasahara, Ikuo Fukuda, Haruki Nakamura
- Journal Title
  
  PLoS One
  
  Volume: 9 (11) Issue: 11 Pages: e112419-e112419
- DOI
  10.1371/journal.pone.0112419
- NAID
  120005596267
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-ORGANIZER-24118001, KAKENHI-PLANNED-24118008, KAKENHI-PROJECT-25390156
[Journal Article] Molecular dynamics simulations of a double-stranded DNA in an explicit solvent model with zero-dipole summation method2013
- Author(s)
  Arakawa T, Kamiya N, Nakamura H, Fukuda I
- Journal Title
  
  PLoS ONE
  
  Volume: 8 Issue: 10 Pages: e76606-e76606
- DOI
  10.1371/journal.pone.0076606
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23370071, KAKENHI-ORGANIZER-24118001, KAKENHI-PLANNED-24118008, KAKENHI-PROJECT-25390156, KAKENHI-PROJECT-25440070
[Journal Article] Molecular Dynamics Simulations Accelerated by GPU for Biological Macromolecules with a Non-Ewald Scheme for Electrostatic Interactions2013
- Author(s)
  Mashimo T, Fukunishi Y, Kamiya N, Takano Y, Fukuda I, Nakamura H
- Journal Title
  
  J. Chem. Theory Comput
  
  Volume: 9 Issue: 12 Pages: 5599-5609
- DOI
  10.1021/ct400342e
- NAID
  120005604144
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370071, KAKENHI-PROJECT-23657103, KAKENHI-PUBLICLY-25104717, KAKENHI-PROJECT-25390156, KAKENHI-PROJECT-25440070
[Journal Article] Application of zero-dipole summation method to molecular dynamics2013
- Author(s)
  Narutoshi Kamiya
- Journal Title
  
  Chem. Phys. Lett.
  
  Volume: 568-569 Pages: 26-32
- DOI
  10.1016/j.cplett.2013.03.014
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22570160, KAKENHI-PROJECT-23370071, KAKENHI-PROJECT-23657103, KAKENHI-PLANNED-24118008, KAKENHI-PROJECT-25390156, KAKENHI-ORGANIZER-24118001
[Journal Article] Zero-Multipole Summation Method for Efficiently Estimating Electrostatic Interactions in Molecular System2013
- Author(s)
  Ikuo Fukuda
- Journal Title
  
  The Journal of Chemical Physics
  
  Volume: 139 Issue: 17 Pages: 174107-174107
- DOI
  10.1063/1.4827055
- NAID
  120005647643
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] Cutoff-based approach for efficiently calculating electrostatic interactions in molecular simulations: from physical approach to beyond2023
- Author(s)
  Ikuo Fukuda, Kei Moritsugu, Yoshifumi Fukunishi
- Organizer
  International Conference on Mathematical Modeling in Physical Sciences
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K11134
[Presentation] Cutoff-based approach for efficiently calculating electrostatic interactions in molecular simulations: from physical approach to beyond2023
- Author(s)
  Ikuo Fukuda, Kei Moritsugu, Yoshifumi Fukunishi
- Organizer
  12th International Conference on Mathematical Modeling in Physical Sciences
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K11854
[Presentation] Molecular dynamics sampling scheme utilizing dynamically enforced heat-bath temperature2022
- Author(s)
  Ikuo Fukuda and Kei Moritsugu
- Organizer
  11th International Conference on Mathematical Modeling in the Physical Sciences
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K11854
[Presentation] Molecular dynamics scheme coupling a physical system and an environment system: mathematical structure and enhanced sampling2021
- Author(s)
  Ikuo Fukuda and Kei Moritsugu
- Organizer
  10th International Conference on Mathematical Modeling in the Physical Sciences
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K11854
[Presentation] Enhanced conformational sampling of cyclic peptide cyclorasin by coupled Nose--Hoover equation2020
- Author(s)
  Kei Moritsugu, Koh Takeuchi, Yoshifumi Fukunishi, Ikuo Fukuda
- Organizer
  CBI学会2020大会
- Data Source
  KAKENHI-PROJECT-20K11854
[Presentation] Enhanced conformational sampling of cyclic peptide cyclorasin by coupled Nose--Hoover equation2020
- Author(s)
  Kei Moritsugu, Koh Takeuchi, Yoshifumi Fukunishi, and Ikuo Fukuda
- Organizer
  CBI学会2020大会
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] Coupled Nose-Hoover方程式による温度―エネルギー空間上の高効率サンプリングの実現2020
- Author(s)
  福田育夫，森次圭，福西快文
- Organizer
  日本物理学会第75回年次大会
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] A nonlinear ordinary differential equation with a fully statistical description for a physical system and an environment system2019
- Author(s)
  Ikuo Fukuda, Kei Moritsugu, Yoshifumi Fukunishi
- Organizer
  8th International Nonlinear Science Conference 2019
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] myPresto, computer-aided drug development software2019
- Author(s)
  Shinji Iida, Ikuo Fukuda, Junichi Higo , Kota Kasahara, Takashi Kurosawa, Tadaaki Mashimo, Kiyotaka Misoo, Yoshinori Wakabayasi, Ryuta Murakami, Chisato Kanai, Yusuke Sugihara, Mitsuhito Wada, Hironori Nakamura, Yoshifumi Fukunishi
- Organizer
  第57回日本生物物理学会年会
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] 一般的な摩擦項をもつ運動方程式に対する拡張されたベルレ型積分法2019
- Author(s)
  福田育夫
- Organizer
  日本物理学会2019年秋季大会
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] 温度制御方程式系の合成とその応用可能性2019
- Author(s)
  福田育夫，森次圭，福西快文
- Organizer
  日本物理学会第74回年次大会
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] Double density dynamics and coupled Nose-Hoover equations2018
- Author(s)
  Ikuo Fukuda and Kei Moritsugu
- Organizer
  The 2nd Global Conference on Applied Physics, Mathematics and Computing
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] 合成系密度力学の開発2018
- Author(s)
  福田育夫，森次圭
- Organizer
  日本物理学会
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] A coupling of physical system and a temperature system: Coupled Nose-Hoover equations2018
- Author(s)
  Ikuo Fukuda and Kei Moritsugu
- Organizer
  第56回日本生物物理学会年会
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] Non-Ewald methods for simply and precisely calculating electrostatic interactions in molecular simulations2017
- Author(s)
  Ikuo Fukuda
- Organizer
  JCUP VIII
- Invited
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] Zero-multipole summation method: non-Ewald method for simply and precisely calculating electrostatic interactions in molecular simulations2017
- Author(s)
  Ikuo Fukuda
- Organizer
  Seminar at Science for Life Laboratory, Stockholm University
- Invited
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] Non-Ewald method for accurately and efficiently calculating electrostatic interactions in molecular simulations2017
- Author(s)
  Ikuo Fukuda, Narutoshi Kamiya, Kota Kasahara, Han Wang, Shun Sakuraba, Haruki Nakamura
- Organizer
  “Conformational Ensembles from Experimental Data and Computer Simulations” meeting sponsored by the Biophysical Society
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K05143
[Presentation] 零多重極子和法による静電相互作用計算: 理論と実際2016
- Author(s)
  福田育夫，神谷成敏，笠原浩太，寺田透，Han Wang，桜庭俊，中村春木
- Organizer
  日本物理学会第71回年次大会
- Place of Presentation
  東北学院大学
- Year and Date
  2016-03-19
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] Novel non-Ewald methods for calculating electrostatic interactions in molecular simulations2015
- Author(s)
  Ikuo Fukuda, Narutoshi Kamiya, Han Wang, Kota Kasahara, Haruki Nakamura
- Organizer
  第53回日本生物物理学会年会
- Place of Presentation
  ,金沢大学
- Year and Date
  2015-09-13
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] Development and application of novel non-Ewald methods for calculating electrostatic interactions in molecular simulations2015
- Author(s)
  Ikuo Fukuda, Narutoshi Kamiya, Han Wang, Kota Kasahara, Haruki Nakamura
- Organizer
  29th Annual Symposium of The Protein Society
- Place of Presentation
  Barcelona, Spain
- Year and Date
  2015-07-22
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] Development of a simple and accurate non-Ewald method for calculating electrostatic interactions in molecular simulations2015
- Author(s)
  Ikuo Fukuda
- Organizer
  Seminar at Institut de Chimie, Radicalaire, Universite d'Aix-Marseille
- Place of Presentation
  UMR7273-CNRS Universite d'Aix-Marseille, France
- Year and Date
  2015-07-30
- Invited
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] Molecular Mechanism of Inhibition of Transcription Factor Ets1-DNA Binding, Induced by Phosphorylation on a Disordered Region2015
- Author(s)
  Kasahara Kota, Higo Junichi, Shiina Masaaki, Fukuda Ikuo, Ogata Kazuhiro, Nakamura Haruki
- Organizer
  第53回日本生物物理学会年会
- Place of Presentation
  金沢大学
- Year and Date
  2015-09-13
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] Zero-multipole summation法による効率的静電相互作用計算2014
- Author(s)
  福田育夫, 神谷成敏，中村春木
- Organizer
  日本物理学会第69回年次大会
- Place of Presentation
  東海大学湘南キャンパス
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] Non-Ewald scheme for calculating electrostatic interactions of a charged particle system via a neutralization concept2014
- Author(s)
  Ikuo Fukuda
- Organizer
  Seminar at Institut fuer Mathematik, Freie Universitaet Berlin
- Place of Presentation
  Berlin, Germany
- Year and Date
  2014-04-07
- Invited
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] Zero-dipole summation method for evaluating electrostatic interaction in molecular simulation of biomolecular system2013
- Author(s)
  Ikuo Fukuda, Narutoshi Kamiya, Haruki Nakamura
- Organizer
  第51回日本生物物理学会年会
- Place of Presentation
  京都国際会館
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] The zero-dipole summation method and its application to molecular simulation with homogenous and inhomogeneous systems2013
- Author(s)
  Ikuo Fukuda, Narutoshi Kamiya, Kota Kasahara, Haruki Nakamura
- Organizer
  APPC12 The 12th Asia Pacific Physics Conference of AAPPS, ASEPS3 The third Asia-Europe Physics Summit
- Place of Presentation
  International Conference Halls, Makuhari Messe Chiba, Japan
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] 分子シミュレーションにおける新しい静電相互作用計算法の開発と応用
- Author(s)
  福田育夫, Han Wang，中村春木
- Organizer
  日本物理学会第70回年次大会
- Place of Presentation
  早稲田大学
- Year and Date
  2015-03-21 – 2015-03-24
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] 分子動力学シミュレーション解析のためのMulti-modal Dynamic Cross Correlation法の開発と応用
- Author(s)
  笠原浩太, 福田育夫, 中村春木
- Organizer
  生命医薬情報学連合大会
- Place of Presentation
  仙台国際センター
- Year and Date
  2014-10-02 – 2014-10-04
- Data Source
  KAKENHI-PROJECT-25390156
[Presentation] Molecular dynamics study on enhancer recognitions by cooperative binding of Ets1 and partner transcription factors
- Author(s)
  Kota Kasahara, Ikuo Fukuda, and Haruki Nakamura
- Organizer
  The 4th Asia Pacific Protein Association Conference
- Place of Presentation
  Jeju, Korea
- Year and Date
  2014-05-17 – 2014-05-20
- Data Source
  KAKENHI-PROJECT-25390156

1. MORITSUGU Kei (80599506)

# of Collaborated Projects: 4 results

# of Collaborated Products: 18 results
2. NAKAMURA Haruki (80134485)

# of Collaborated Projects: 1 results

# of Collaborated Products: 15 results
3. HIGO Junichi

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
4. 神谷成敏

# of Collaborated Projects: 0 results

# of Collaborated Products: 4 results

Fukuda Ikuo 福田 育夫

Research Projects

Research Products

Co-Researchers

環境パラメタを分割変数型にした動力学と環境情報入力を最適化した分子相互作用計算Principal Investigator

Principal Investigator

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A molecular dynamics method incorporating deeply interconnected parameter-varied dynamics and charge-distribution-dependent potential functionsPrincipal Investigator

Principal Investigator

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Review Section

Research Institution

Realization of variable molecular dynamics simulations by generalized cutoff method and double density dynamicsPrincipal Investigator

Principal Investigator

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Research Institution

Development of fundamental methods for fast, accurate, and stable simulation of molecular dynamicsPrincipal Investigator

Principal Investigator

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[Book] 長距離力をいかに精度よく効率的に見積もるか―零多重極子和法による静電相互作用計算―2017

Author(s)

Total Pages

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Data Source

[Journal Article] A cutoff-based method with charge-distribution-data driven pair potentials for efficiently estimating electrostatic interactions in molecular systems.2023

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[Journal Article] Non-Ewald Methods for Evaluating the Electrostatic Interactions of Charge Systems: Similarity and Difference2022

Author(s)

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[Journal Article] On Ergodicity for Multi-Dimensional Harmonic Oscillator Systems with Nose--Hoover Type Thermostat2021

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[Journal Article] Flexibility and cell permeability of cyclic Ras-inhibitor peptides revealed by coupled Nose Hoover equation2021

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[Journal Article] Analysis of multiple data sequences with different distributions: defining common principal component axes by ergodic sequence generation and multiple reweighting composition2021

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[Journal Article] A Robust, Symmetric Operator-Composition Integrator for the Berendsen Temperature-Control Molecular Dynamics Equation2020

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[Journal Article] Temperature--Energy-Space Sampling Molecular Dynamics: Deterministic and Single-Replica Method Utilizing Continuous Temperature System2020

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[Journal Article] Symmetric, Explicit Numerical Integrator for Molecular Dynamics Equations of Motion with a Generalized Friction2019

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[Journal Article] Enhanced Sampling of Molecular Dynamics Simulations of a Polyalanine Octapeptide: Effects of the Periodic Boundary Conditions on Peptide Conformation2018

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[Journal Article] Performance Evaluation of the Zero-Multipole Summation Method in Modern Molecular Dynamics2018

Fukuda Ikuo 福田育夫