Poon Charissa ＰｏｏｎＣｈａｒｉｓｓａＴｉｎｇＡｍａｎｄａ

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Poon CharissaTingAmanda プーンカリサ

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Researcher Number	40933130
Other IDs	https://orcid.org/0000-0002-4147-8559
Affiliation (Current)	2024: 国立研究開発法人理化学研究所, 脳神経科学研究センター, 基礎科学特別研究員
Affiliation (based on the past Project Information) *help	2022 – 2023: 国立研究開発法人理化学研究所, 脳神経科学研究センター, 特別研究員
Review Section/Research Field	Principal Investigator Basic Section 51030:Pathophysiologic neuroscience-related
Keywords	Principal Investigator コンピュータビジョン / グリア細胞 / 認知症疾患 / 分子・細胞・神経生物学 / 画像情報処理・画像認識 / microscopy / image processing / amyloid / deep learning / plaques / glial cells / alzheimer's disease / segmentation

Research Projects
(1 results)
Research Products
(12 results)

DeepAD: An automated and interpretable machine learning pipeline for image analyses of biomarkers in Alzheimer's diseasePrincipal Investigator
- Principal Investigator
  
  Poon CharissaTingAmanda
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 51030:Pathophysiologic neuroscience-related
- Research Institution
  Institute of Physical and Chemical Research

All 2024 2023 2022

All Journal Article Presentation

[Journal Article] Meta-learning for segmentation of in situ hybridization gene expression images2024
- Author(s)
  Poon Charissa, Byra Michal, Shimogori Tomomi, Skibbe Henrik
- Journal Title
  
  Medical Imaging with Deep Learning
  
  Volume: 1 Pages: 1-3
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15658
[Journal Article] The Brain/MINDS Marmoset Connectivity Resource: An open-access platform for cellular-level tracing and tractography in the primate brain2023
- Author(s)
  Skibbe Henrik、Rachmadi Muhammad Febrian、Nakae Ken、Gutierrez Carlos Enrique、Hata Junichi、Tsukada Hiromichi、Poon Charissa、Schlachter Matthias、Doya Kenji、Majka Piotr、Rosa Marcello G. P.、Okano Hideyuki、Yamamori Tetsuo、Ishii Shin、Reisert Marco、Watakabe Akiya
- Journal Title
  
  PLOS Biology
  
  Volume: 21 Issue: 6 Pages: 1-37
- DOI
  10.1371/journal.pbio.3002158
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15658, KAKENHI-ORGANIZER-22H05154
[Journal Article] Improving Segmentation of Objects with Varying Sizes in Biomedical Images using Instance-wise and Center-of-Instance Segmentation Loss Function2023
- Author(s)
  Rachmadi, Muhammad Febrian; Poon, Charissa; Skibbe, Henrik
- Journal Title
  
  Proceedings of Machine Learning Research
  
  Volume: nnn Pages: 1-15
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15658
[Journal Article] An automated pipeline to create an atlas of in situ hybridization gene expression data in the adult marmoset brain2023
- Author(s)
  Poon, Charissa; Rachmadi, Muhammad Febrian; Byra, Michal; Schlachter, Matthias; Xu, Binbin; Shimogori, Tomomi; Skibbe, Henrik
- Journal Title
  
  International Symposium on Biomedical Imaging
  
  Volume: n/a Pages: 1-15
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15658
[Presentation] A 3D gene expression atlas of the adult marmoset brain2024
- Author(s)
  Poon Charissa, Byra Michal, Rachmadi Muhammad Febrian, Xu Binbin, Decroocq Meghane, Shimogori Tomomi, Skibbe Henrik
- Organizer
  RIKEN Life Science Retreat
- Data Source
  KAKENHI-PROJECT-22K15658
[Presentation] Meta-learning for segmention of in situ hybriization gene expression images2024
- Author(s)
  Poon Charissa, Byra Michal, Shimogori Tomomi, Skibbe Henrik
- Organizer
  Medical Imaging with Deep Learning
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15658
[Presentation] An automated pipeline to create an atlas of in situ hybridization gene expression data in the adult marmoset brain2023
- Author(s)
  Poon, Charissa; Rachmadi, Muhammad Febrian; Byra, Michal; Schlachter Matthias; Xu, Binbin; Shimogori, Tomomi; Skibbe, Henrik
- Organizer
  International Symposium on Biomedical Imaging
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15658
[Presentation] An automated pipeline to create a gene expression atlas in the marmoset brain2023
- Author(s)
  Poon Charissa, Byra Michal, Rachmadi Muhammad Febrian, Xu Binbin, Decroocq Meghane, Shimogori Tomomi, Skibbe Henrik
- Organizer
  Japan Neuroscience Conference
- Data Source
  KAKENHI-PROJECT-22K15658
[Presentation] A 3D gene expression atlas of the adult marmoset brain2023
- Author(s)
  Poon Charissa, Byra Michal, Rachmadi Muhammad Febrian, Xu Binbin, Decroocq Meghane, Shimogori Tomomi, Skibbe Henrik
- Organizer
  RIKEN Center for Brain Science Retreat
- Data Source
  KAKENHI-PROJECT-22K15658
[Presentation] Semi-supervised semantic segmentation of in situ hybridization gene expression in the marmoset brain2022
- Author(s)
  Poon, Charissa; Rachmadi, Muhammad Febrian; Byra, Michal; Shimogori, Tomomi; Skibbe, Henrik
- Organizer
  Society for Neuroscience 2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15658
[Presentation] Semi-supervised semantic segmentation of in situ hybridization gene expression in the marmoset brain2022
- Author(s)
  Poon, Charissa; Rachmadi, Muhammad Febrian; Byra, Michal; Shimogori, Tomomi; Skibbe, Henrik
- Organizer
  International Symposium on Artificial Intelligence and Brain Science
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15658
[Presentation] Semi-supervised semantic segmentation of in situ hybridization gene expression in the marmoset brain2022
- Author(s)
  Poon, Charissa; Rachmadi, Muhammad Febrian; Byra, Michal; Shimogori, Tomomi; Skibbe, Henrik
- Organizer
  The 45th Annual Meeting of the Japan Neuroscience Society
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-22K15658

Poon Charissa Ｐｏｏｎ ＣｈａｒｉｓｓａＴｉｎｇＡｍａｎｄａ

Poon CharissaTingAmanda プーン カリサ

Research Projects

Research Products

DeepAD: An automated and interpretable machine learning pipeline for image analyses of biomarkers in Alzheimer's diseasePrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Meta-learning for segmentation of in situ hybridization gene expression images2024

Author(s)

Journal Title

Data Source

[Journal Article] The Brain/MINDS Marmoset Connectivity Resource: An open-access platform for cellular-level tracing and tractography in the primate brain2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Improving Segmentation of Objects with Varying Sizes in Biomedical Images using Instance-wise and Center-of-Instance Segmentation Loss Function2023

Author(s)

Journal Title

Data Source

[Journal Article] An automated pipeline to create an atlas of in situ hybridization gene expression data in the adult marmoset brain2023

Author(s)

Journal Title

Data Source

[Presentation] A 3D gene expression atlas of the adult marmoset brain2024

Author(s)

Organizer

Data Source

[Presentation] Meta-learning for segmention of in situ hybriization gene expression images2024

Author(s)

Organizer

Data Source

[Presentation] An automated pipeline to create an atlas of in situ hybridization gene expression data in the adult marmoset brain2023

Author(s)

Organizer

Data Source

[Presentation] An automated pipeline to create a gene expression atlas in the marmoset brain2023

Author(s)

Organizer

Data Source

[Presentation] A 3D gene expression atlas of the adult marmoset brain2023

Author(s)

Organizer

Data Source

[Presentation] Semi-supervised semantic segmentation of in situ hybridization gene expression in the marmoset brain2022

Author(s)

Organizer

Data Source

[Presentation] Semi-supervised semantic segmentation of in situ hybridization gene expression in the marmoset brain2022

Author(s)

Organizer

Data Source

[Presentation] Semi-supervised semantic segmentation of in situ hybridization gene expression in the marmoset brain2022

Author(s)

Organizer

Data Source

Poon Charissa ＰｏｏｎＣｈａｒｉｓｓａＴｉｎｇＡｍａｎｄａ

Poon CharissaTingAmanda プーンカリサ