Onda Yoshihiko 恩田義彦

Researcher Number	50547073
Other IDs
Affiliation (based on the past Project Information) *help	2016 – 2018: 国立研究開発法人理化学研究所, 環境資源科学研究センター, 研究員 2015: 国立研究開発法人理化学研究所, その他部局等, 特別研究員 2015: 国立研究開発法人理化学研究所, 環境資源科学研究センター, 特別研究員
Review Section/Research Field	Principal Investigator Science in genetics and breeding Except Principal Investigator Plant protection science / Statistical science
Keywords	Principal Investigator QTL / Brachypodium / ミナトカモジグサ / 高温ストレス / 環境ストレス / SNP / 高温耐性 Except Principal Investigator 抵抗性 / 植物病理 / トランスクリプトーム … More / QTL解析 / トランスクリプトーム解析 / Rhizoctonia solani / ミナトカモジグサ / 病害抵抗性 / 紋枯病 / パターン認識 / 森林減少 / 倍数体 / 遺伝子発現 / 時空間モデリング / 植物の表現型 / コンピュータビジョン / 遺伝子ネットワーク / 超高解像度画像 / 自己回帰型回帰モデル / 構造的SVM / マルチラベル判別 / 遺伝子間制御ネットワーク / 磁気嵐指数 / 太陽活動 / スパースモデリング Less

温帯性モデル草本における高温耐性遺伝子の同定と高温環境への適応進化過程の解明Principal Investigator
- Principal Investigator
  
  恩田義彦
- Project Period (FY)
  2017 – 2018
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Science in genetics and breeding
- Research Institution
  Institute of Physical and Chemical Research
Characterization of sheath blight-resistant mechanisms using Brachypodium distachyon
- Principal Investigator
  
  Kouzai Yusuke
- Project Period (FY)
  2016 – 2017
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Research Field
  
  Plant protection science
- Research Institution
  Institute of Physical and Chemical Research
Understanding of the pre-adaptation mechanisms generated by cryptic genetic variationPrincipal Investigator
- Principal Investigator
  
  Onda Yoshihiko
- Project Period (FY)
  2015 – 2016
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Science in genetics and breeding
- Research Institution
  Institute of Physical and Chemical Research
Statistical modeling of spatio-temporal data on natural and social phenomena, and those understanding
- Principal Investigator
  
  Nishii Ryuei
- Project Period (FY)
  2015 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Statistical science
- Research Institution
  Kyushu University

All 2018 2017 2016 2015

All Journal Article Presentation

[Journal Article] Salicylic acid‐dependent immunity contributes to resistance against Rhizoctonia solani, a necrotrophic fungal agent of sheath blight, in rice and Brachypodium distachyon2018
- Author(s)
  Kouzai, Y. et al.
- Journal Title
  
  New Phytologist
  
  Volume: 217 Issue: 2 Pages: 771-783
- DOI
  10.1111/nph.14849
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H04383, KAKENHI-PROJECT-16H07452
[Journal Article] Multiplex PCR Targeted Amplicon Sequencing (MTA-Seq): Simple, Flexible, and Versatile SNP Genotyping by Highly Multiplexed PCR Amplicon Sequencing2018
- Author(s)
  Onda Yoshihiko、Takahagi Kotaro、Shimizu Minami、Inoue Komaki、Mochida Keiichi
- Journal Title
  
  Frontiers in Plant Science
  
  Volume: 9 Pages: 1-10
- DOI
  10.3389/fpls.2018.00201
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K15214, KAKENHI-PROJECT-15H02670
[Journal Article] Homoeolog-specific activation of genes for heat acclimation in the allopolyploid grass brachypodium hybridum2018
- Author(s)
  Takahagi,K., Inoue,K.,Shimizu, M.,Uehara-Yamaguchi,Y.,Onda, Y. and Mochida, K.
- Journal Title
  
  Giga Science
  
  Volume: giy020 Issue: 4 Pages: 1-13
- DOI
  10.1093/gigascience/giy020
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H02670
[Journal Article] 草本系バイオマス増産のためのゲノム育種基盤2017
- Author(s)
  持田恵一、香西雄介、恩田義彦
- Journal Title
  
  アグリバイオ
  
  Volume: 1 Pages: 1314-1317
- NAID
  40021807953
- Data Source
  KAKENHI-PROJECT-16H07452
[Journal Article] Diurnal Transcriptome and Gene Network Represented through Sparse Modeling in Brachypodium distachyon2017
- Author(s)
  Koda S, Onda Y, Matsui H, Takahagi K, Uehara-Yamaguchi Y, Shimizu M, Inoue K, Yoshida T, Sakurai T, Honda H, Eguchi S, Nishii R and Mochida K
- Journal Title
  
  Front. Plant Sci
  
  Volume: 8 Pages: 2055-2055
- DOI
  10.3389/fpls.2017.02055
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15KT0038, KAKENHI-PROJECT-15H01678, KAKENHI-PROJECT-15H02670, KAKENHI-PROJECT-16H02790, KAKENHI-PROJECT-17H01701
[Journal Article] Exploring Genetic Diversity in Plants by Using High-Throughput Sequencing Techniques.2016
- Author(s)
  Onda, Y. and Mochida, K.
- Journal Title
  
  Current Genomics
  
  Volume: 17 Pages: 356-365
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K14634
[Journal Article] Expression profiling of marker genes responsive to the defence-associated phytohormones salicylic acid, jasmonic acid and ethylene in Brachypodium distachyon.2016
- Author(s)
  Kouzai, Y., Kimura, M., Yamanaka, Y., Watanabe, M., Matsui, H., Yamamoto, M., Ichinose, Y., Toyoda, K., Onda, Y., Mochida, K. and Noutoshi, Y.
- Journal Title
  
  BMC Plant Biology
  
  Volume: 16 Issue: 1 Pages: 1-11
- DOI
  10.1186/s12870-016-0749-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K14634, KAKENHI-PROJECT-25292035
[Journal Article] Conserved but Attenuated Parental Gene Expression in Allopolyploids: Constitutive Zinc Hyperaccumulation in the Allotetraploid Arabidopsis kamchatica2016
- Author(s)
  Paape T, Hatakeyama M, Shimizu-Inatsugi R, Cereghetti T, Onda Y, Kenta T, Sees J, Shimizu KK
- Journal Title
  
  Molecular biology and evolution
  
  Volume: 33 Issue: 11 Pages: 2781-2800
- DOI
  10.1093/molbev/msw141
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-16H06469, KAKENHI-PROJECT-15H02670
[Journal Article] Determination of growth stages and metabolic profiles in Brachypodium distachyon for comparison of developmental context with Triticeae crops.2015
- Author(s)
  Onda, Y., Hashimoto, K., Yoshida, T., Sakurai, T., Sawada, Y., Hirai, M.Y., Toyooka, K., Mochida, K. and Shinozaki, K.
- Journal Title
  
  Proceedings of the Royal Society B
  
  Volume: 282 Issue: 1811 Pages: 1-8
- DOI
  10.1098/rspb.2015.0964
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K14634, KAKENHI-PROJECT-15H02670, KAKENHI-PROJECT-24687007, KAKENHI-PROJECT-26712003
[Journal Article] 新しいモデル草本植物　ミナトカモジグサ (Brachypodium distachyon)2015
- Author(s)
  持田恵一, 恩田義彦, 佐々木忠将, 氷室泰代, 最相大輔, 小林正智, 平山隆志, 篠崎一雄
- Journal Title
  
  植物の生長調節
  
  Volume: 50 Pages: 103-109
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K14634
[Presentation] Statistical gene analysis and contributions to low-carbon society2018
- Author(s)
  Satoru Koda, Ryuei Nishii, Keiichi Mochida, Yoshihiko Onda
- Organizer
  I2CNER Annual Symposium
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H02670
[Presentation] 抵抗性と罹病性のミナトカモジグサへの紋枯病菌感染時のトランスクリプトーム比較解析2018
- Author(s)
  香西雄介、能年義輝、井上小槙、恩田義彦、持田恵一
- Organizer
  平成30年度日本植物病理学会
- Data Source
  KAKENHI-PROJECT-16H07452
[Presentation] Statistical gene data analysis and applications to plant growth2018
- Author(s)
  Satoru Koda, Yoshihiko Onda, Hidetoshi Matsui,Ryuei Nishii and Keiichi Mochida
- Organizer
  International workshop: Data driven crop design technology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H02670
[Presentation] Diurnal transcriptome and gene network represented through sparse modeling in Brachypodium distachyon2018
- Author(s)
  Satoru Koda, Yoshihiko Onda, Hidetoshi Matsui, Kotaro Takahagi, Yukiko Uehara-Yamaguchi, Minami Shimizu, Komaki lnoue, Takuhiro Yoshida, Tetsuya Sakurai, Hiroshi Honda, Shinto Eguchi, Ryuei Nishii, Keiichi Mochida
- Organizer
  第59回日本植物生理学会年会
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H02670
[Presentation] 小型草本モデル植物ミナトカモジグサを用いた紋枯病抵抗性系統の探索とその特徴付け2017
- Author(s)
  香西雄介、持田恵一、恩田義彦、能年義輝
- Organizer
  平成29年度日本植物病理学会
- Data Source
  KAKENHI-PROJECT-16H07452
[Presentation] MTA-seq: Simple, Flexible, and Versatile SNP Genotyping by Highly Multiplex PCR Amplicon Sequencing Demonstrated in Brachypodium distachyon.2017
- Author(s)
  Onda, Y., Takahagi, K., Shimizu, M., Inoue, K., Mochida, K.
- Organizer
  PlantBiology2017
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K15214
[Presentation] A simple and versatile SNP genotyping method by multiplex PCR amplicon sequence in Brachypodium distachyon.2017
- Author(s)
  Yoshihiko Onda, Minami Shimizu, Kotaro Takahagi, Keiichi Mochida
- Organizer
  International Plant & Animal Genome XXV
- Place of Presentation
  San Diego, USA
- Year and Date
  2017-01-14
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K14634
[Presentation] Screening of sheath blight resistant accessions in Brachypodium distachyon2017
- Author(s)
  Kouzai Y, Onda Y, Mochida K, Noutoshi Y
- Organizer
  第58回日本植物病理学会年会
- Place of Presentation
  鹿児島大学郡元キャンパス
- Year and Date
  2017-03-16
- Data Source
  KAKENHI-PROJECT-16H07452
[Presentation] ミナトカモジグサにおける植物免疫ホルモン応答性マーカー遺伝子の同定と発現プロファイルの解析2016
- Author(s)
  香西雄介, 山中由利恵, 渡邉恵, 木村麻美子, 松井英譲, 山本幹博, 一瀬勇規, 豊田和弘, 恩田義彦, 持田恵一, 能年義輝
- Organizer
  平成28年度日本植物病理学会関西部会
- Place of Presentation
  静岡県コンベンションアーツセンター
- Year and Date
  2016-09-29
- Data Source
  KAKENHI-PROJECT-16H07452
[Presentation] Artificial crossing method and development of population genotyping technique based on amplicon sequence in Brachypodium distachyon.2016
- Author(s)
  Yoshihiko Onda, Minami Shimizu, Kotaro Takahagi, Fumiko Kato, Risa Nakayama, Keiichi Mochida.
- Organizer
  第57回日本植物生理学会年会
- Place of Presentation
  岩手大学
- Year and Date
  2016-03-18
- Data Source
  KAKENHI-PROJECT-15K14634
[Presentation] 発熱植物における「花の匂い生産」についてのトランスクリプトーム解析2016
- Author(s)
  恩田義彦, 持田恵一, 吉田拓広, 櫻井哲也, Roger Seymour, 梅川結, Stergios Pirintsos, 篠崎一雄, 伊藤菊一.
- Organizer
  第63回日本生態学会仙台大会
- Place of Presentation
  仙台国際センター
- Year and Date
  2016-03-20
- Data Source
  KAKENHI-PROJECT-15K14634
[Presentation] 植物バイオマス増産のための遺伝子データ解析2015
- Author(s)
  江田智尊, 松井秀俊, 西井龍映, 持田恵一, 恩田義彦, 櫻井哲也, 吉田拓広
- Organizer
  統計科学研究会情報・統計科学シンポジウム
- Place of Presentation
  九州大学（福岡県福岡市）
- Year and Date
  2015-12-04
- Data Source
  KAKENHI-PROJECT-15H02670
[Presentation] Introduction to genome duplication and the allopolyploid Arabidopsis kamchatica and Cardamine spp. as model polyploid species to study ecological speciation.2015
- Author(s)
  Kentaro Shimizu, Tim Paape, Masaomi Hatakeyama, Reiko Akiyama, Rie Shimizu-Inatsugi, Satoru Akama, Jun Sese, Tanaka Kenta, Yoshihiko Onda.
- Organizer
  日本進化学会第17回大会
- Place of Presentation
  中央大学後楽園キャンパス
- Year and Date
  2015-08-20
- Data Source
  KAKENHI-PROJECT-15K14634

1. MOCHIDA Keiichi (90387960)

# of Collaborated Projects: 3 results

# of Collaborated Products: 18 results
2. SHIMIZU Minami

# of Collaborated Projects: 2 results

# of Collaborated Products: 3 results
3. UEHARA Yukiko

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
4. Nishii Ryuei (40127684)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
5. Kouzai Yusuke (50783502)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
6. NOUTOSHI Yoshiteru (70332278)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
7. 松田安昌 (10301590)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 田中章司郎 (00197427)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 前園宜彦 (30173701)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 増田弘毅 (10380669)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. 二宮嘉行 (50343330)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 松井秀俊 (90633305)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
13. KATO Fumiko

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
14. NAKAYAMA Risa

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
15. Koda Satoru

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
16. INOUE Komaki

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
17. Takahagi Kotaro

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
18. Sakurai Tetsuya

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
19. 清水健太郎

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Onda Yoshihiko 恩田 義彦

Research Projects

Research Products

Co-Researchers

温帯性モデル草本における高温耐性遺伝子の同定と高温環境への適応進化過程の解明Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Characterization of sheath blight-resistant mechanisms using Brachypodium distachyon

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Understanding of the pre-adaptation mechanisms generated by cryptic genetic variationPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Statistical modeling of spatio-temporal data on natural and social phenomena, and those understanding

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] Salicylic acid‐dependent immunity contributes to resistance against Rhizoctonia solani, a necrotrophic fungal agent of sheath blight, in rice and Brachypodium distachyon2018

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Multiplex PCR Targeted Amplicon Sequencing (MTA-Seq): Simple, Flexible, and Versatile SNP Genotyping by Highly Multiplexed PCR Amplicon Sequencing2018

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Homoeolog-specific activation of genes for heat acclimation in the allopolyploid grass brachypodium hybridum2018

Author(s)

Journal Title

DOI

Data Source

[Journal Article] 草本系バイオマス増産のためのゲノム育種基盤2017

Author(s)

Journal Title

NAID

Data Source

[Journal Article] Diurnal Transcriptome and Gene Network Represented through Sparse Modeling in Brachypodium distachyon2017

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Exploring Genetic Diversity in Plants by Using High-Throughput Sequencing Techniques.2016

Author(s)

Journal Title

Data Source

[Journal Article] Expression profiling of marker genes responsive to the defence-associated phytohormones salicylic acid, jasmonic acid and ethylene in Brachypodium distachyon.2016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Conserved but Attenuated Parental Gene Expression in Allopolyploids: Constitutive Zinc Hyperaccumulation in the Allotetraploid Arabidopsis kamchatica2016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Determination of growth stages and metabolic profiles in Brachypodium distachyon for comparison of developmental context with Triticeae crops.2015

Author(s)

Journal Title

DOI

Data Source

[Journal Article] 新しいモデル草本植物 ミナトカモジグサ (Brachypodium distachyon)2015

Author(s)

Journal Title

Data Source

[Presentation] Statistical gene analysis and contributions to low-carbon society2018

Author(s)

Organizer

Data Source

Onda Yoshihiko 恩田義彦

[Journal Article] 新しいモデル草本植物　ミナトカモジグサ (Brachypodium distachyon)2015