KAMIMURA Atsushi 上村淳

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上村淳カミムラアツシ

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Researcher Number	50582847
Other IDs
Affiliation (Current)	2025: 東京大学, 生産技術研究所, 特任助教
Affiliation (based on the past Project Information) *help	2021 – 2023: 東京大学, 生産技術研究所, 特任助教
Review Section/Research Field	Principal Investigator 1002:Human informatics, applied informatics and related fields
Keywords	Principal Investigator 細胞分裂 / 自己複製

Research Projects
(1 results)
Research Products
(14 results)

細胞の自己複製能と制御法則の理解Principal Investigator
- Principal Investigator
  
  上村淳
- Project Period (FY)
  2021 – 2024
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Review Section
  
  1002:Human informatics, applied informatics and related fields
- Research Institution
  The University of Tokyo

All 2023 2022 2021

All Journal Article Presentation

[Journal Article] Hessian geometric structure of chemical thermodynamic systems with stoichiometric constraints2022
- Author(s)
  Sughiyama Yuki、Loutchko Dimitri、Kamimura Atsushi、Kobayashi Tetsuya J.
- Journal Title
  
  Physical Review Research
  
  Volume: 4 Issue: 3 Pages: 033065-033065
- DOI
  10.1103/physrevresearch.4.033065
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K21308, KAKENHI-ORGANIZER-19H05794, KAKENHI-PLANNED-19H05799
[Journal Article] Hessian geometry of nonequilibrium chemical reaction networks and entropy production decompositions2022
- Author(s)
  Kobayashi Tetsuya J.、Loutchko Dimitri、Kamimura Atsushi、Sughiyama Yuki
- Journal Title
  
  Physical Review Research
  
  Volume: 4 Issue: 3 Pages: 033208-033208
- DOI
  10.1103/physrevresearch.4.033208
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K21308, KAKENHI-ORGANIZER-19H05794, KAKENHI-PLANNED-19H05799
[Journal Article] Kinetic derivation of the Hessian geometric structure in chemical reaction networks2022
- Author(s)
  Kobayashi Tetsuya J.、Loutchko Dimitri、Kamimura Atsushi、Sughiyama Yuki
- Journal Title
  
  Physical Review Research
  
  Volume: 4 Issue: 3 Pages: 033066-033066
- DOI
  10.1103/physrevresearch.4.033066
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K21308, KAKENHI-ORGANIZER-19H05794, KAKENHI-PLANNED-19H05799
[Journal Article] Chemical thermodynamics for growing systems2022
- Author(s)
  Sughiyama Yuki、Kamimura Atsushi、Loutchko Dimitri、Kobayashi Tetsuya J.
- Journal Title
  
  Physical Review Research
  
  Volume: 4 Issue: 3 Pages: 033191-033191
- DOI
  10.1103/physrevresearch.4.033191
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K21308, KAKENHI-ORGANIZER-19H05794, KAKENHI-PLANNED-19H05799
[Presentation] Chemical thermodynamics for growing protocells2023
- Author(s)
  Atsushi Kamimura, Yuki Sughiyama, Tetsuya J. Kobayashi
- Organizer
  Origins of Life Donostia Meeting 2023
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K21308
[Presentation] Chemical thermodynamics for growing compartments2023
- Author(s)
  Atsushi Kamimura, Yuki Sughiyama, Dimitri Loutchko, Tetsuya J. Kobayashi
- Organizer
  Molecular Origins of Life, Munich 2023
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K21308
[Presentation] 体積成長を伴う自己複製反応過程の熱力学2023
- Author(s)
  上村　淳
- Organizer
  Biothermology Workshop
- Invited
- Data Source
  KAKENHI-PROJECT-21K21308
[Presentation] Chemical thermodynamics for growing compartments with stoichiometric constraints2023
- Author(s)
  上村　淳、杉山友規、小林徹也
- Organizer
  日本生物物理学会第61回年次大会
- Data Source
  KAKENHI-PROJECT-21K21308
[Presentation] 機械学習ベースの隠れ状態推定手法の比較と生物データへの応用2023
- Author(s)
  谷本佑馬、上村　淳、小林徹也
- Organizer
  第26回情報論的学習理論ワークショップ
- Data Source
  KAKENHI-PROJECT-21K21308
[Presentation] The fate of growing systems under thermodynamic and stoichiometric constraints2023
- Author(s)
  Atsushi Kamimura, Yuki Sughiyama, Tetsuya J. Kobayashi
- Organizer
  STATPHYS28 The 28th IUPAP International Conference on Statistical Physics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K21308
[Presentation] 体積成長を考慮した自己複製系の化学熱力学2023
- Author(s)
  上村　淳、杉山友規、小林徹也
- Organizer
  「細胞を創る」研究会 16.0
- Data Source
  KAKENHI-PROJECT-21K21308
[Presentation] 細胞成長の化学熱力学的な制限2022
- Author(s)
  上村　淳
- Organizer
  新学術領域「情報物理学でひもとく生命の秩序と設計原理」領域会議
- Data Source
  KAKENHI-PROJECT-21K21308
[Presentation] A general approach to chemical thermodynamics and constraints for growing systems2022
- Author(s)
  上村　淳
- Organizer
  日本生物物理学会第60回年次大会
- Data Source
  KAKENHI-PROJECT-21K21308
[Presentation] Representation and inference of cell growth and division by neural-network-aided point processes2021
- Author(s)
  上村　淳
- Organizer
  日本生物物理学会第59回年次大会
- Data Source
  KAKENHI-PROJECT-21K21308

KAMIMURA Atsushi 上村 淳

上村 淳 カミムラ アツシ

Research Projects

Research Products

細胞の自己複製能と制御法則の理解Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Hessian geometric structure of chemical thermodynamic systems with stoichiometric constraints2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Hessian geometry of nonequilibrium chemical reaction networks and entropy production decompositions2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Kinetic derivation of the Hessian geometric structure in chemical reaction networks2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Chemical thermodynamics for growing systems2022

Author(s)

Journal Title

DOI

Data Source

[Presentation] Chemical thermodynamics for growing protocells2023

Author(s)

Organizer

Data Source

[Presentation] Chemical thermodynamics for growing compartments2023

Author(s)

Organizer

Data Source

[Presentation] 体積成長を伴う自己複製反応過程の熱力学2023

Author(s)

Organizer

Data Source

[Presentation] Chemical thermodynamics for growing compartments with stoichiometric constraints2023

Author(s)

Organizer

Data Source

[Presentation] 機械学習ベースの隠れ状態推定手法の比較と生物データへの応用2023

Author(s)

Organizer

Data Source

[Presentation] The fate of growing systems under thermodynamic and stoichiometric constraints2023

Author(s)

Organizer

Data Source

[Presentation] 体積成長を考慮した自己複製系の化学熱力学2023

Author(s)

Organizer

Data Source

[Presentation] 細胞成長の化学熱力学的な制限2022

Author(s)

Organizer

Data Source

[Presentation] A general approach to chemical thermodynamics and constraints for growing systems2022

Author(s)

Organizer

Data Source

[Presentation] Representation and inference of cell growth and division by neural-network-aided point processes2021

Author(s)

Organizer

Data Source

KAMIMURA Atsushi 上村淳

上村淳カミムラアツシ