NISHII Kanae 西井かなえ

… Alternative Names

西井かなえニシイカナエ

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Researcher Number	50743770
Other IDs
Affiliation (Current)	2025: 神奈川大学, 付置研究所, 研究員
Affiliation (based on the past Project Information) *help	2019 – 2022: 神奈川大学, 付置研究所, 研究員 2015 – 2018: 東京学芸大学, 教育学部, 研究員
Review Section/Research Field	Principal Investigator Basic Section 45030:Biodiversity and systematics-related / Biodiversity/Systematics
Keywords	Principal Investigator イワタバコ科 / 次世代シーケンス / 葉発生 / 茎頂分裂組織 / ロングリードシーケンス / QTL解析 / 次世代シークエンス / ゲノム / 重イオンビーム照射変異体 / ゲノムワイド関連解析 … More / ゲノムアッセンブリ / 高分子DNA抽出法 / 次世代シーケンサー / イギリス / 国際情報交換 / 個体発生 / 遺伝子マップ / 次世代シーケンサー解析 / RADシーケンス / ストレプトカルプス属 / トランスクリプトーム / ゲノムシーケンス Less

Unravelling the genetics of leaf formation in unifoliatesPrincipal Investigator
- Principal Investigator
  
  Nishii Kanae
- Project Period (FY)
  2018 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 45030:Biodiversity and systematics-related
- Research Institution
  Kanagawa University
  Tokyo Gakugei University
NGS studies towards the isolation of genes responsible for the loss of the shoot apical meristem during plant evolutionPrincipal Investigator
- Principal Investigator
  
  NISHII Kanae
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Biodiversity/Systematics
- Research Institution
  Tokyo Gakugei University

All 2023 2022 2021 2020 2019 2018 2017 2016 2015

All Journal Article Presentation

[Journal Article] The first genome for the Cape Primrose Streptocarpus rexii (Gesneriaceae), a model plant for studying meristem‐driven shoot diversity2022
- Author(s)
  Nishii Kanae、Hart Michelle、Kelso Nathan、Barber Sadie、Chen Yun‐Yu、Thomson Marian、Trivedi Urmi、Twyford Alex D.、M?ller Michael
- Journal Title
  
  Plant Direct
  
  Volume: 6 Issue: 4
- DOI
  10.1002/pld3.388
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] Plant contig clustering based assembly (PLCL) pipeline: an efficient long-read assembly tool for plant chloroplast and mitochondrial genomes v12022
- Author(s)
  Nishii Kanae
- Journal Title
  
  protocols.io
  
  Volume: na Pages: 53125-53125
- DOI
  10.17504/protocols.io.bx5dpq26
- Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] High Molecular Weight DNA extraction for long-read sequencing v.1 v12022
- Author(s)
  Nishii Kanae、Moeller Michael、Hart Michelle
- Journal Title
  
  protocols.io
  
  Volume: na Pages: 35215-35215
- DOI
  10.17504/protocols.io.bempjc5n
- Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] Phylogenomics of Gesneriaceae using targeted capture of nuclear genes2021
- Author(s)
  Ogutcen Ezgi、Christe Camille、Nishii Kanae、Salamin Nicolas、Moeller Michael、Perret Mathieu
- Journal Title
  
  Molecular Phylogenetics and Evolution
  
  Volume: 157 Pages: 107068-107068
- DOI
  10.1016/j.ympev.2021.107068
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] Mix and match: Patchwork domain evolution of the land plant-specific Ca2+-permeable mechanosensitive channel MCA2021
- Author(s)
  Nishii, K., Moeller, M., and Iida, H.
- Journal Title
  
  PLoS ONE
  
  Volume: 16 Issue: 4 Pages: 1-20
- DOI
  10.1371/journal.pone.0249735
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K06539, KAKENHI-PROJECT-18K06375
[Journal Article] QTL dissection of floral traits in Streptocarpus (Gesneriaceae)2020
- Author(s)
  Chen Yun-Yu、Nishii Kanae、Kidner Catherine、Hackett Christine Anne、Moeller Michael
- Journal Title
  
  Euphytica
  
  Volume: 216 Issue: 7 Pages: 110-110
- DOI
  10.1007/s10681-020-02647-1
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] Hormonal crosstalk in the regulation of meristem activity and the phyllomorph architecture in Streptocarpus (Gesneriaceae): a review2020
- Author(s)
  K. Nishii、A. Spada、Moeller M.
- Journal Title
  
  Rheedea
  
  Volume: 30 Issue: 1 Pages: 96-115
- DOI
  10.22244/rheedea.2020.30.01.04
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] A molecular phylogeny of Southeast Asian Cyrtandra (Gesneriaceae) supports an emerging paradigm for Malesian plant biogeography2020
- Author(s)
  Atkins H, Bramley G, Johnson M, Kartonegoro A, Nishii K, Kokubugata G, Moeller M, Hughes M
- Journal Title
  
  Frontiers of Biogeography
  
  Volume: 12 Issue: 1
- DOI
  10.21425/f5fbg44184
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] Virus-induced gene silencing in Streptocarpus rexii (Gesneriaceae)2020
- Author(s)
  Nishii K, Fei Y, Hudson A, Moeller M, Molnar A
- Journal Title
  
  Molecular Biotechnology
  
  Volume: - Issue: 6-7 Pages: 317-325
- DOI
  10.1007/s12033-020-00248-w
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] Quantitative assessment of anisocotyly in Haberlea rhodopensis and Ramonda myconi2019
- Author(s)
  Huang B-H, Nishii K, Wang C-N, Moeller M
- Journal Title
  
  Edinburgh Journal of Botany
  
  Volume: 76 Issue: 3 Pages: 377-391
- DOI
  10.1017/s0960428619000179
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] The family placement of Cyrtandromoea2019
- Author(s)
  Luna J、Richardson J, Nishii K, Clark J, Moeller M
- Journal Title
  
  Systematic Botany
  
  Volume: 44 Issue: 3 Pages: 616-630
- DOI
  10.1600/036364419x15620113920653
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] Notes on Cyrtandra (Gesneriaceae) from Japan, Taiwan and Batan Island (Philippines)2019
- Author(s)
  Nishii K, Kokubugata G, Moeller M, Atkins H
- Journal Title
  
  Edinburgh Journal of Botany
  
  Volume: 76 Issue: 3 Pages: 333-344
- DOI
  10.1017/s0960428619000106
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] Tangled history of a multigene family: The evolution of ISOPENTENYLTRANSFERASE genes2018
- Author(s)
  Kanae Nishii, Frank Wright, Yun-Yu Chen, Michael Moeller
- Journal Title
  
  PLoS One
  
  Volume: 13 Issue: 8 Pages: e0201198-e0201198
- DOI
  10.1371/journal.pone.0201198
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Journal Article] A first genetic map in the genus Streptocarpus generated with RAD sequencing based SNP markers2018
- Author(s)
  Yun-Yu Chen, Kanae Nishii, Sadie Barber, Christine Hackett, Catherine A. Kidner, Karim Gharbi, Atsushi J. Nagano, Akitoshi Iwamoto, Michael Moeller
- Journal Title
  
  South African Journal of Botany
  
  Volume: 117 Pages: 158-168
- DOI
  10.1016/j.sajb.2018.05.009
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375, KAKENHI-PROJECT-16H06171
[Journal Article] From shoot to leaf: step-wise shifts in meristem and KNOX1 activity correlate with the evolution of unifoliate body plan in Gesneriaceae2017
- Author(s)
  Kanae Nishii, Bing-Hong Huang, Chun-Neng Wang, Michael Moeller
- Journal Title
  
  Development, Genes and Evolution
  
  Volume: 227 Issue: 1 Pages: 41-60
- DOI
  10.1007/s00427-016-0568-x
- Peer Reviewed / Acknowledgement Compliant / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18593
[Journal Article] Cytokinin biosynthesis ISOPENTENYLTRANSFERASE genes are differentially expressed during phyllomorph development in the acaulescent Streptocarpus rexii (Gesneriaceae)2017
- Author(s)
  Chen Y.-Y.、Nishii K.、Spada A.、Wang C.-N.、Sakakibara H.、Kojima M.、Wright F.、MacKenzie K.、Moeller M.
- Journal Title
  
  South African Journal of Botany
  
  Volume: 109 Pages: 96-111
- DOI
  10.1016/j.sajb.2016.12.010
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18593
[Journal Article] Streptocarpus redefined to include all Afro-Malagasy Gesneriaceae: Molecular phylogenies prove congruent with geography and cytology and uncovers remarkable morphological homoplasies2015
- Author(s)
  Kanae Nishii, Mark Hughes, Marie Briggs, Elspeth Haston, Frieda Christie, Margaret J. DeVilliers, Thea Hanekom, Wiets G. Roos, Dirk U. Bellstedt, Michael Moeller
- Journal Title
  
  Taxon
  
  Volume: 64 Issue: 6 Pages: 1243-1274
- DOI
  10.12705/646.8
- Peer Reviewed / Acknowledgement Compliant / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18593
[Journal Article] The European paleoendemic Harberlea rhodopensis (Gesneriaceae) has an oligocene origiin and a pleistocene diversification and occurs in a long-persisting refugial area in southeastern Europe2015
- Author(s)
  Galya Petrova, Daniela Moyankova, Kanae Nishii, Laura Forrest, Ioannis Tsiripidis, Andreas D. Drouzas, Dimiter Djilianov, Michael Moeller
- Journal Title
  
  International Journal of Plant Sciences
  
  Volume: 176 Pages: 499-514
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18593
[Journal Article] Chayamaritia (Gesneriaceae: Didymocarpoideae), a new genus from Southeast Asia2015
- Author(s)
  David J. Middleton, Kanae Nishii, Carmen Puglisi, Laura Forrest, Michael Moeller
- Journal Title
  
  Plant Systematics and Evolution
  
  Volume: 301 Issue: 7 Pages: 1947-1966
- DOI
  10.1007/s00606-015-1213-2
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18593
[Journal Article] Rearranging specimens on herbarium type sheets of Streptocarpus betsiliensis Humbert (Gesneriaceae)2015
- Author(s)
  Michael Moeller, Kanae Nishii, Martin W. Callmander, Peter B. Phillipson, Odile Poncy
- Journal Title
  
  Candollea
  
  Volume: 70 Issue: 1 Pages: 145-150
- DOI
  10.15553/c2015v701a12
- Peer Reviewed / Acknowledgement Compliant / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18593
[Presentation] 葉分裂組織分子機構の理解に向けた重イオンビーム照射によるストレプトカーパス変異体の作成2023
- Author(s)
  西井かなえ, Moeller Michael, Kelso Nathan, France Hazel, Barber Sadie, 林依子, 石井公太郎, 阿部知子
- Organizer
  理研シンポジウム「重イオンビーム育種による持続可能な社会や特産品創出の実現」
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] High molecular weight DNA extraction protocols for non-model plant species - the first step in long-read sequencing2022
- Author(s)
  Nishii Kanae, Forrest Laura L, Bell David, Ruhsam Markus, Hollingsworth Peter M, Howard Caroline, Todorovic Maja, Hart Michelle
- Organizer
  The 5th European Conservation Genetics meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] ストレプトカーパス属の異種交配系統における減数分裂の観察2022
- Author(s)
  西井かなえ、Moeller Michael
- Organizer
  第63回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] DNA quality impact on long-read sequencing: a case study from the recalcitrant plant Streptocarpus2022
- Author(s)
  Nishii Kanae, Moeller Michael, Hart Michelle
- Organizer
  Edinburgh Genomics PacBio Day
- Invited
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] Plant contig clustering-based genome assembly (PLCL) pipeline: assembling the chloroplast and mitochondrial genomes from Oxford Nanopore Technologies long-read sequencing2022
- Author(s)
  Nishii Kanae, Moeller Michael
- Organizer
  The 86th Annual Meeting of the Botanical Society of Japan
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] Evolutionary studies of the Ca2+-permeable mechanosensitive channel MCA2021
- Author(s)
  西井かなえ、Moeller Michael、飯田秀利
- Organizer
  日本植物学会　第85回大会
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] ストレプトカルプス異種交配系統を用いた花形態形成因子のQTL解析2021
- Author(s)
  西井かなえ, CHEN Yun-Yu, KIDNER Catherine, HACKETT Christine Anne, MOELLER Michael
- Organizer
  第62回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] ヨーロッパ産イワタバコ科子葉の形態形成解析2020
- Author(s)
  西井かなえ、ファンビンホン、ワンジュンヌ、モラマイケル
- Organizer
  第61回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] ストレプトカルプス（イワタバコ科）のウィルス誘導性遺伝子サイレンシング2020
- Author(s)
  西井かなえ, FEI Yue, HUSDON Andrew, MOELLER Michael, MOLNAR Attila
- Organizer
  日本植物学会第84回大会
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] Recent progress in one-leaf plant studies; searching for meristem regulatory factors in their genomes2018
- Author(s)
  西井かなえ, Yun-Yu Chen, Michael Moeller
- Organizer
  第59回日本植物生理学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-15K18593
[Presentation] サイトカイニン合成遺伝子ISOPENTENYLTRANSFERASEの複雑な進化過程2018
- Author(s)
  西井かなえ, Frank Wright, Yun-Yu Chen, Michael Moeller
- Organizer
  日本植物学会第82回大会
- Data Source
  KAKENHI-PROJECT-18K06375
[Presentation] 茎頂分裂組織を欠失したストレプトカルプス属における分子進化機構解明に向けたゲノム資源の整備2017
- Author(s)
  西井かなえ, Chen Yun-Yu, Barber Sadie, 岩元明敏、Moeller Michael
- Organizer
  日本植物学会第81回大会
- Data Source
  KAKENHI-PROJECT-15K18593
[Presentation] Early Cotyledonary meristem activity and STM expression appears to be ancestral in Lamiales and has diversified in Gesneriaceae2017
- Author(s)
  Kanae Nishii, Bing-Hong Huang, Chun-Neng Wang, Michael Moeller
- Organizer
  Taiwan-Japan Plant Biology 2017
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18593
[Presentation] Applying Nest Generation Sequencing for building map using RAD-seq genotyping and draft genome assembly2017
- Author(s)
  Chen Yun-Yu, 西井かなえ, Barber Sadie, Hackett Christine, Kidner Catherine, Gharbi Karim, Nagano Atsushi, 岩元明敏、Moeller Michael
- Organizer
  日本植物学会第81回大会
- Data Source
  KAKENHI-PROJECT-15K18593
[Presentation] Differential expression of cytokinin biosynthesis IPT genes in non-model Cape Primrose plants2017
- Author(s)
  Yun-Yu Chen, Kanae Nishii, Chun-Neng Wang, Alberto Spada, Hitoshi Sakakibara, Kojima Mikiko, Michael Moeller
- Organizer
  Taiwan-Japan Plant Biology 2017
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18593
[Presentation] Isocotylous and anisocotylous Gesneriaceae share the meristem activity in lateral organs2016
- Author(s)
  西井かなえ、Bing-Hong Huang、Chun-Neng Wang、Michael Moeller
- Organizer
  日本植物学会
- Place of Presentation
  沖縄コンベンションセンター（沖縄県・宜野湾市）
- Year and Date
  2016-09-16
- Data Source
  KAKENHI-PROJECT-15K18593
[Presentation] Expression study of ISOPENTENYLTRANSFERASE genes in the rosulate Streptocarpus rexii in the light of the evolution of the cytokinin biosynthesis multigene family2016
- Author(s)
  Kanae Nishii, Yun-yu Chen, Frank Wright, Katrin Mackenzie, Alberto Spada, Chun-Neng Wang, Michael Moeller
- Organizer
  日本植物生理学会
- Place of Presentation
  盛岡・岩手大学
- Year and Date
  2016-03-18
- Data Source
  KAKENHI-PROJECT-15K18593

1. IWAMOTO Akitoshi

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
2. NAGANO Atsushi

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
3. MÖLLER Michael

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 飯田秀利

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

NISHII Kanae 西井 かなえ

西井 かなえ ニシイ カナエ

Research Projects

Research Products

Co-Researchers

Unravelling the genetics of leaf formation in unifoliatesPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

NGS studies towards the isolation of genes responsible for the loss of the shoot apical meristem during plant evolutionPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] The first genome for the Cape Primrose Streptocarpus rexii (Gesneriaceae), a model plant for studying meristem‐driven shoot diversity2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Plant contig clustering based assembly (PLCL) pipeline: an efficient long-read assembly tool for plant chloroplast and mitochondrial genomes v12022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] High Molecular Weight DNA extraction for long-read sequencing v.1 v12022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Phylogenomics of Gesneriaceae using targeted capture of nuclear genes2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Mix and match: Patchwork domain evolution of the land plant-specific Ca2+-permeable mechanosensitive channel MCA2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] QTL dissection of floral traits in Streptocarpus (Gesneriaceae)2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Hormonal crosstalk in the regulation of meristem activity and the phyllomorph architecture in Streptocarpus (Gesneriaceae): a review2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] A molecular phylogeny of Southeast Asian Cyrtandra (Gesneriaceae) supports an emerging paradigm for Malesian plant biogeography2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Virus-induced gene silencing in Streptocarpus rexii (Gesneriaceae)2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Quantitative assessment of anisocotyly in Haberlea rhodopensis and Ramonda myconi2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] The family placement of Cyrtandromoea2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Notes on Cyrtandra (Gesneriaceae) from Japan, Taiwan and Batan Island (Philippines)2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Tangled history of a multigene family: The evolution of ISOPENTENYLTRANSFERASE genes2018

Author(s)

Journal Title

NISHII Kanae 西井かなえ

西井かなえニシイカナエ