MATSUMOTO Saki 松本咲

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Matsumoto Saki 松本咲

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Researcher Number	50850822
Other IDs
Affiliation (Current)	2025: 甲南大学, 先端生命工学研究所, 特任教員(助教)
Affiliation (based on the past Project Information) *help	2019 – 2023: 甲南大学, 先端生命工学研究所, 特任教員(助教)
Review Section/Research Field	Principal Investigator Basic Section 37010:Bio-related chemistry / 0501:Physical chemistry, functional solid state chemistry, organic chemistry, polymers, organic materials, biomolecular chemistry, and related fields Except Principal Investigator Medium-sized Section 37:Biomolecular chemistry and related fields
Keywords	Principal Investigator RNA高次構造 / 分子クラウディング / グアニン四重らせん / 定量的解析 / 遺伝子発現 / 核酸非二重らせん構造 / RNA構造 / 核酸非標準構造 / 細胞老化 / 翻訳 … More / 老化 / RNA-タンパク質相互作用 / 液－液相分離 / 相分離 / 遺伝子発現制御 / 核酸高次構造 / RNA / DNA … More Except Principal Investigator 構造解析 / 遺伝子発現 / 熱力学的解析 / 非二重らせん構造 / 核酸 / 非標準構造 / 植物 / NMR / 結晶構造解析 / 熱力学 / 非標準核酸構造 Less

DNA非標準構造によるDNAメチル化制御メカニズムの解明Principal Investigator
- Principal Investigator
  
  松本咲
- Project Period (FY)
  2023 – 2024
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 37010:Bio-related chemistry
- Research Institution
  Konan University
RNA高次構造による老化促進メカニズムの解明Principal Investigator
- Principal Investigator
  
  松本咲
- Project Period (FY)
  2020 – 2023
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 37010:Bio-related chemistry
- Research Institution
  Konan University
The effect of non-canonical structure of nucleic acids on liquid-liquid phase separationPrincipal Investigator
- Principal Investigator
  
  Matsumoto Saki
- Project Period (FY)
  2019 – 2020
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Review Section
  
  0501:Physical chemistry, functional solid state chemistry, organic chemistry, polymers, organic materials, biomolecular chemistry, and related fields
- Research Institution
  Konan University
Analysis and regulation of non-canonical nucleic acids under intracellular conditions
- Principal Investigator
  
  Sugimoto Naoki
- Project Period (FY)
  2018 – 2023
- Research Category
  
  Fund for the Promotion of Joint International Research (Fostering Joint International Research (B))
- Review Section
  
  Medium-sized Section 37:Biomolecular chemistry and related fields
- Research Institution
  Konan University

All 2023 2022 2021 2020

All Journal Article Presentation Book

[Book] 月刊「細胞」2021年 5月臨時増刊号分子夾雑effect: 見えてきた疾患や創薬との繋がり2021
- Author(s)
  松本咲、杉本直己
- Total Pages
  62
- Publisher
  ニューサイエンス社
- Data Source
  KAKENHI-PROJECT-21K14742
[Book] 進化を続ける核酸化学（14章遺伝子発現における核酸の新機能）2021
- Author(s)
  松本咲、杉本直己
- Total Pages
  228
- Publisher
  化学同人
- ISBN
  9784759814019
- Data Source
  KAKENHI-PROJECT-21K14742
[Journal Article] Liquid-Liquid Phase Separation and Nucleic Acids2023
- Author(s)
  Tateishi-Karimata Hisae、Matsumoto Saki、Sugimoto Naoki
- Journal Title
  
  Book cover Book cover Handbook of Chemical Biology of Nucleic Acids
  
  Volume: - Pages: 1-40
- DOI
  10.1007/978-981-16-1313-5_90-1
- ISBN
  9789811613135
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21K14742
[Journal Article] Volumetric Strategy for Quantitatively Elucidating a Local Hydration Network around a G-Quadruplex2022
- Author(s)
  Matsumoto Saki、Takahashi Shuntaro、Bhowmik Sudipta、Ohyama Tatsuya、Sugimoto Naoki
- Journal Title
  
  Analytical Chemistry
  
  Volume: 94 Issue: 20 Pages: 7400-7407
- DOI
  10.1021/acs.analchem.2c01075
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K05283, KAKENHI-PROJECT-21K14742, KAKENHI-PROJECT-18KK0164, KAKENHI-PROJECT-22H04975
[Journal Article] DNA methylation is regulated by both the stability and topology of G-quadruplex2022
- Author(s)
  Matsumoto Saki、Tateishi-Karimata Hisae、Sugimoto Naoki
- Journal Title
  
  Chemical Communications
  
  Volume: 58 Issue: 89 Pages: 12459-12462
- DOI
  10.1039/d2cc04383a
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21K14742, KAKENHI-ORGANIZER-21H05107, KAKENHI-PLANNED-21H05109, KAKENHI-PROJECT-22H04975, KAKENHI-PROJECT-20H02864
[Journal Article] Dielectricity of a molecularly crowded solution accelerates NTP misincorporation during RNA-dependent RNA polymerization by T7 RNA polymerase2022
- Author(s)
  S. Takahashi, S. Matsumoto, P. Chilka, S. Ghosh, H. Okura, and N. Sugimoto
- Journal Title
  
  Sci. Rep.
  
  Volume: 12 Issue: 1 Pages: 1149-1149
- DOI
  10.1038/s41598-022-05136-8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K21258, KAKENHI-PLANNED-17H06351, KAKENHI-PROJECT-19H00928, KAKENHI-PROJECT-19F19337, KAKENHI-PROJECT-21K05283, KAKENHI-PROJECT-18KK0164, KAKENHI-PROJECT-21K14742
[Journal Article] New Insights into the Functions of Nucleic Acids Controlled by Cellular Microenvironments2021
- Author(s)
  Matsumoto Saki、Sugimoto Naoki
- Journal Title
  
  Topics in Current Chemistry
  
  Volume: 379 Issue: 3 Pages: 17-17
- DOI
  10.1007/s41061-021-00329-7
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19K23639, KAKENHI-PLANNED-17H06351, KAKENHI-PROJECT-19H00928, KAKENHI-PROJECT-21K14742
[Journal Article] Effect of DNA modifications on the transition bet and non-canoncial DNA stransures in CpG islands during senescence2021
- Author(s)
  S. Matsumoto, H. Tateishi-Karimata, T. Ohyama, and N. Sugimoto
- Journal Title
  
  RSC Adv.
  
  Volume: 11 Issue: 59 Pages: 37205-37217
- DOI
  10.1039/d1ra07201c
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K21258, KAKENHI-PLANNED-17H06351, KAKENHI-ORGANIZER-21H05107, KAKENHI-PLANNED-21H05109, KAKENHI-PROJECT-19H00928, KAKENHI-PROJECT-20H02864, KAKENHI-PROJECT-21K14742, KAKENHI-PROJECT-18KK0164
[Journal Article] Effect of morecular crowding on the stability of RNA G-quadruplexes with various numbers of quartets and lengths of loops2020
- Author(s)
  S. Matsumoto, H. Tateishi-Karimata, S. Takahashi, T. Ohyama, and N. Sugimoto
- Journal Title
  
  Biochemistry
  
  Volume: 59 Issue: 28 Pages: 2640-2649
- DOI
  10.1021/acs.biochem.0c00346
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K21258, KAKENHI-PROJECT-18KK0164, KAKENHI-PLANNED-17H06351, KAKENHI-PROJECT-20H02864, KAKENHI-PROJECT-17K01968, KAKENHI-PROJECT-19K23639
[Presentation] 環境に応答して変化する核酸構造による遺伝子発現制御2023
- Author(s)
  松本咲、建石寿枝、杉本直己
- Organizer
  2023年度生物工学若手研究者の集い（若手会）夏のセミナー2023
- Invited
- Data Source
  KAKENHI-PROJECT-21K14742
[Presentation] 脱ワトソン・クリックの核酸化学 (87): 高圧力を用いたグアニン四重鎖の水和解析によるリガンド結合予測2023
- Author(s)
  高橋俊太郎, 松本咲, 大山達也, S. Bhowmik, 杉本直己
- Organizer
  日本化学会第102回春季年会
- Data Source
  KAKENHI-PROJECT-21K14742
[Presentation] リピートRNAの細胞毒性凝集体の形成を抑制するリガンドの探索2023
- Author(s)
  松本咲、建石寿枝、大山達也、杉本直己
- Organizer
  第17回バイオ関連化学シンポジウム
- Data Source
  KAKENHI-PROJECT-21K14742
[Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (74): Effect of DNA modifications on the transition between canonical and non-canonical DNA structures in CpG island2022
- Author(s)
  S. Matsumoto, H. Tateishi-Karimata, T. Ohyama, N. Sugimoto
- Organizer
  日本化学会第102回春季年会
- Data Source
  KAKENHI-PROJECT-18KK0164
[Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (68) : Topological control of DNA G-quadruplexes in CpG islands by changes of surrounding environments during senescence2022
- Author(s)
  Saki Matsumoto;Hisae Tateishi-Karimata;Tatsuya Ohyama;Naoki Sugimoto
- Organizer
  日本化学会第101春季年会
- Data Source
  KAKENHI-PROJECT-21K14742
[Presentation] ARS-CoV-2由来RNA依存性RNAポリメラーゼの複製反応におけるグアニン四重鎖の効果とその制御2022
- Author(s)
  高橋俊太郎, 松本咲, 建石寿枝, Byeang Hyean Kim, 杉本直己
- Organizer
  第16回バイオ関連化学シンポジウム
- Data Source
  KAKENHI-PROJECT-21K14742
[Presentation] DNA methylation depending on stability and topology of G-quadruplex2022
- Author(s)
  S. Matsumoto, H. Tateishi-Karimata, N. Sugimoto
- Organizer
  Advances in Noncanonical Nucleic Acids 2022 “ANNA2022”
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K14742
[Presentation] The effect of stability and topology of G-quadruplex on DNA methylation2022
- Author(s)
  S. Matsumoto, H. Tateishi-Karimata, N. Sugimoto
- Organizer
  第49回国際核酸化学シンポジウム
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K14742
[Presentation] グアニン四重らせん構造の安定性とトポロジーによるDNAメチル化制御2022
- Author(s)
  松本咲, 建石寿枝, 杉本直己
- Organizer
  第16回バイオ関連化学シンポジウム
- Data Source
  KAKENHI-PROJECT-21K14742
[Presentation] DNA methylation depending on stability and topology of G-quadruplex2022
- Author(s)
  S. Matsumoto, H. Tateishi-Karimata, N. Sugimoto
- Organizer
  Advances in Noncanonical Nucleic Acids 2022 “ANNA2022”
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18KK0164
[Presentation] 脱ワトソン・クリックの核酸化学 (68): 老化における細胞内環境変化によるCpGアイランドのグアニン四重らせん構造のトポロジー制御2021
- Author(s)
  松本咲, 大山達也, 杉本直己
- Organizer
  日本化学会第101春季年会
- Data Source
  KAKENHI-PROJECT-19K23639
[Presentation] Effect of DNA modifications on the changes of DNA structure in CpG islands2021
- Author(s)
  Saki Matsumoto;Hisae Tateishi-Karimata;Tatsuya Ohyama;Naoki Sugimoto
- Organizer
  International conference on chemical and environmental sciences (ICCAES 2021)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-21K14742
[Presentation] Effect of DNA modifications on the changes of DNA structure in CpG islands2021
- Author(s)
  S. Matsumoto, H. Tateishi-Karimata, O. Tatsuya, N. Sugimoto
- Organizer
  ICCAES 2021
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18KK0164
[Presentation] 脱ワトソン・クリックの核酸化学(68): 老化における細胞内環境変化によるCpGアイランドのグアニン四重らせん構造のトポロジー制御2021
- Author(s)
  松本咲, 大山達也, 杉本直己
- Organizer
  日本化学会第101回春季年会
- Data Source
  KAKENHI-PROJECT-18KK0164
[Presentation] 異なるGカルテット数とループ長を有するRNAグアニン四重らせんの安定性への分子クラウディングの効果2020
- Author(s)
  松本咲, 建石寿枝, 高橋俊太郎, 大山達也, 杉本直己
- Organizer
  第14回バイオ関連化学シンポジウム
- Data Source
  KAKENHI-PROJECT-19K23639
[Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix(58): The effect of molecular crowding on the stability of RNA G-quadruplexes with various number of quartets and loops2020
- Author(s)
  S. Matsumoto, H. Tateishi-Karimata, S. Takahashi, and N. Sugimoto
- Organizer
  日本化学会第100回春季年会
- Data Source
  KAKENHI-PROJECT-19K23639
[Presentation] 異なるGカルテット数とループ長を有するRNAグアニン四重らせんの安定性への分子クラウディングの効果2020
- Author(s)
  松本咲, 建石寿枝, 高橋俊太郎, 大山達也, 杉本直己
- Organizer
  第14回バイオ関連化学シンポジウム
- Data Source
  KAKENHI-PROJECT-18KK0164

1. Sugimoto Naoki (60206430)

# of Collaborated Projects: 1 results

# of Collaborated Products: 8 results
2. TENG Ye (00830621)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. 建石寿枝 (20593495)

# of Collaborated Projects: 1 results

# of Collaborated Products: 6 results
4. 高橋俊太郎 (40456257)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
5. 遠藤玉樹 (90550236)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. GHOSH SAPTARSHI (40840781)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

MATSUMOTO Saki 松本 咲

Matsumoto Saki 松本 咲

Research Projects

Research Products

Co-Researchers

DNA非標準構造によるDNAメチル化制御メカニズムの解明Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

RNA高次構造による老化促進メカニズムの解明Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

The effect of non-canonical structure of nucleic acids on liquid-liquid phase separationPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Analysis and regulation of non-canonical nucleic acids under intracellular conditions

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Book] 月刊「細胞」2021年 5月臨時増刊号 分子夾雑effect: 見えてきた疾患や創薬との繋がり2021

Author(s)

Total Pages

Publisher

Data Source

[Book] 進化を続ける核酸化学（14章 遺伝子発現における核酸の新機能 ）2021

Author(s)

Total Pages

Publisher

ISBN

Data Source

[Journal Article] Liquid-Liquid Phase Separation and Nucleic Acids2023

Author(s)

Journal Title

DOI

ISBN

Data Source

[Journal Article] Volumetric Strategy for Quantitatively Elucidating a Local Hydration Network around a G-Quadruplex2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] DNA methylation is regulated by both the stability and topology of G-quadruplex2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Dielectricity of a molecularly crowded solution accelerates NTP misincorporation during RNA-dependent RNA polymerization by T7 RNA polymerase2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] New Insights into the Functions of Nucleic Acids Controlled by Cellular Microenvironments2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Effect of DNA modifications on the transition bet and non-canoncial DNA stransures in CpG islands during senescence2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Effect of morecular crowding on the stability of RNA G-quadruplexes with various numbers of quartets and lengths of loops2020

Author(s)

Journal Title

DOI

Data Source

[Presentation] 環境に応答して変化する核酸構造による遺伝子発現制御2023

Author(s)

Organizer

Data Source

MATSUMOTO Saki 松本咲

Matsumoto Saki 松本咲

[Book] 月刊「細胞」2021年 5月臨時増刊号分子夾雑effect: 見えてきた疾患や創薬との繋がり2021

[Book] 進化を続ける核酸化学（14章遺伝子発現における核酸の新機能）2021