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Yokomori Takashi  横森 貴

ORCIDConnect your ORCID iD *help
… Alternative Names

横森 貴  ヨコモリ タカシ

YOKOMORI Takashi  横森 貴

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Researcher Number 60139722
Other IDs
External Links
Affiliation (based on the past Project Information) *help 2016 – 2020: 早稲田大学, 教育・総合科学学術院, 教授
2004 – 2005: 早稲田大学, 教育・総合科学学術院, 教授
2002 – 2005: 早稲田大学, 教育学部, 教授
1999 – 2000: 早稲田大学, 教育学部, 教授
1994 – 1995: 電気通信大学, 電気通信学部, 助教授
1993: 電気通信大学, 情報工学部, 助教授
1990 – 1991: 電気通信大学, 電気通信学部, 助教授
Review Section/Research Field
Principal Investigator
Theory of informatics / Science and Engineering / 計算機科学
Except Principal Investigator
Science and Engineering / Science and Engineering / 情報工学
Keywords
Principal Investigator
情報基礎 / 生体生命情報学 / 情報工学 / DNAコンピュータ / アルゴリズム / 計算能力 / 多重集合 / 化学反応トランスデューサ / 決定性と可逆性 / オートマトンの分解と分割 … More / 表現定理 / オートマトンの分解 / オートマトン分解 / 言語の表現定理 / 受理計算モデル / 化学反応系 / 分子機械 / 生体機能利用 / 自己組織化 / DNAコンピュータ / 階層グラフ書換え / 少数分子系 / 非線形科学 / 自然計算 / バクテリアコンピュータ / 配列設計 / 自律計算 / 膜計算モデル / 環状組み替えモデル / 自己組織化モデル / 分子計算 / RNA Secondary Structures / Tree Grammars / Learning Theory / Tree grammar / 構造予測 / RNA二次構造 / 機械学習 … More
Except Principal Investigator
自己組織化 / 生体生命情報学 / DNAコンピュータ / ゲルアクチュエータ / 増幅回路 / 光応答性塩基 / DNA計算 / 分子ロボティクス / DNA論理回路 / DNAコンピュータ / 知能ロボティクス / 分子ロボット / 生態生命情報学 / バイオテクノロジー / ナノバイオ / N-queen problem / Randamized algorithm / Boltzmann machine / Clique / Graph / Neural network / nークィ-ン問題 / アルゴリズム / 近似アルゴリズム / Nークィ-ン問題 / 確率化アルゴリズム / ボルツマン機械 / クリ-ク / グラフ / ニュ-ラルネットワ-ク / 帰納推論 / 計算量理論 / 計算論的学習理論 / 仮説推論 / 類推 / 納納推論 / 知識獲得 / 概念形成 Less
  • Research Projects

    (9 results)
  • Research Products

    (38 results)
  • Co-Researchers

    (34 People)
  •  Chemical Reaction Computation based on Reaction Automata TheoryPrincipal Investigator

    • Principal Investigator
      Yokomori Takashi
    • Project Period (FY)
      2017 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Theory of informatics
    • Research Institution
      Waseda University
  •  Design and Implementation of Chemical Reaction Circuits for Molecular Robots with Intelligence

    • Principal Investigator
      Kobayashi Satoshi
    • Project Period (FY)
      2012 – 2016
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Science and Engineering
    • Research Institution
      The University of Electro-Communications
  •  構造的分子計算理論-自律的計算系の解析と設計のための基礎理論Principal Investigator

    • Principal Investigator
      上田 和紀, 横森 貴
    • Project Period (FY)
      2002 – 2006
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Science and Engineering
    • Research Institution
      Waseda University
  •  分子プログラミング

    • Principal Investigator
      萩谷 昌己
    • Project Period (FY)
      2002 – 2007
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Science and Engineering
    • Research Institution
      The University of Tokyo
  •  生体メカニズムに基づく新しい分子計算パラダイムの研究Principal Investigator

    • Principal Investigator
      横森 貴
    • Project Period (FY)
      1999 – 2000
    • Research Category
      Grant-in-Aid for Exploratory Research
    • Research Field
      計算機科学
    • Research Institution
      Waseda University
  •  文法学習アルゴリズムに基づく蛋白質高次構造予測システムの開発Principal Investigator

    • Principal Investigator
      横森 貴
    • Project Period (FY)
      1995
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Research Institution
      The University of Electro-Communications
  •  文法学習アルゴリズムに基づく蛋白質高次構造予測システムの開発Principal Investigator

    • Principal Investigator
      横森 貴
    • Project Period (FY)
      1994
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Research Institution
      The University of Electro-Communications
  •  概念形成・知識獲得過程の理論化

    • Principal Investigator
      有川 節夫
    • Project Period (FY)
      1992 – 1993
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Research Institution
      Kyushu University
  •  Development and Evaluations of Efficient Algorithms for Finding a Maximum Clique Based upon Nueral Networks

    • Principal Investigator
      TOMITA Etsuji
    • Project Period (FY)
      1990 – 1991
    • Research Category
      Grant-in-Aid for General Scientific Research (C)
    • Research Field
      情報工学
    • Research Institution
      The Univesity of Electro-Communications

All 2021 2019 2018 2017 2015 2012 2006 2005 2004 2003 2002

All Journal Article Presentation Book

  • [Book] 自然計算へのいざない2015

    • Author(s)
      編著:小林 聡、萩谷昌己、横森 貴
    • Total Pages
      210
    • Publisher
      近代科学社
    • Data Source
      KAKENHI-PLANNED-24104003
  • [Book] 12^<th> International Meeting on DNA Computing, DNA12, Lecture Notes in Computer Science2006

    • Author(s)
      Chengde Mao, Takashi Yokomori
    • Total Pages
      440
    • Publisher
      Springer-Verlag
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Book] DNA Computing, 12th International Meeting on DNA Computing, DNA122006

    • Author(s)
      Chengde Mao, Takashi Yokomori (Eds.)
    • Publisher
      Springer Verlag
    • Data Source
      KAKENHI-PROJECT-14085205
  • [Journal Article] On the computing powers of L-reductions of insertion languages2021

    • Author(s)
      Okubo Fumiya、Yokomori Takashi
    • Journal Title

      Theoretical Computer Science

      Volume: 862 Pages: 224-235

    • DOI

      10.1016/j.tcs.2020.11.029

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16008, KAKENHI-PROJECT-17K00021
  • [Journal Article] Theory of reaction automata: a survey2021

    • Author(s)
      Yokomori Takashi、Okubo Fumiya
    • Journal Title

      Journal of Membrane Computing

      Volume: 3 Issue: 1 Pages: 63-85

    • DOI

      10.1007/s41965-021-00070-6

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16008, KAKENHI-PROJECT-17K00021
  • [Journal Article] Decomposition and factorization of chemical reaction transducers2019

    • Author(s)
      Okubo Fumiya、Yokomori Takashi
    • Journal Title

      Theoretical Computer Science

      Volume: 印刷中 Pages: 432-442

    • DOI

      10.1016/j.tcs.2019.01.032

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16008, KAKENHI-PROJECT-17K00021
  • [Journal Article] The Computing Power of Determinism and Reversibility in Chemical Reaction Automata2018

    • Author(s)
      F.Okubo and T.Yokomori
    • Journal Title

      Reversibility and Universality (Edited by A.Adamatzky)

      Volume: 30 Pages: 279-298

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00021
  • [Journal Article] Natural Computing Paradigm -- A Concise Introduction2018

    • Author(s)
      T.Yokomori
    • Journal Title

      Journal of Robotics, Networking and Artificial Life

      Volume: 5 Pages: 6-9

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00021
  • [Journal Article] Computing with Multisets: A Survey on Reaction Automata Theory2018

    • Author(s)
      T.Yokomori and F.Okubo
    • Journal Title

      Lecture Notes in Computer Science

      Volume: 10936 Pages: 421-431

    • DOI

      10.1007/978-3-319-94418-0_42

    • ISBN
      9783319944173, 9783319944180
    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00021, KAKENHI-PROJECT-16K16008
  • [Journal Article] Characterizations of Language Families Based on Local and Star Languages2017

    • Author(s)
      F.Okubo and T.Yokomori
    • Journal Title

      Fundamenta Informaticae

      Volume: 154 Pages: 323-341

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00021
  • [Journal Article] On the properties of language classes defined by bounded reaction automata2012

    • Author(s)
      Fumiya Okubo, Satoshi Kobayashi, Takashi Yokomori
    • Journal Title

      Theoretical Computer Science

      Volume: 454 Pages: 206-221

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-24104003
  • [Journal Article] Probabilistic Inference in Test Tube and Its Application to Gene Expression Profiles2006

    • Author(s)
      Y.Sakakibara, T.Yokomori, S.Kobayashi, A.Suyama
    • Journal Title

      Formal Models, Languages And Applications (edited by Subramanian et al.), World Scientific Pub.

      Pages: 304-319

    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Autonomous DNA computer in small vesicle2006

    • Author(s)
      Daisuke Kiga, Koh-ichiroh Shoda, Masahiro Takinoue, Akira Suyama, C. Mao, T. Yokomori, B. Zhang
    • Journal Title

      Preliminary proceedings of DNA 12

      Pages: 420-420

    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Probabilistic Inference in Test Tube and Its Application to Gene Expression Profiles2006

    • Author(s)
      Y.Sakakibara, T.Yokomori, S.Kobayashi, A.Suyama
    • Journal Title

      Formal Models, Languages And Applications (edited by Subramanian et al.) (World Scientific Pub.)

      Pages: 304-319

    • Data Source
      KAKENHI-PROJECT-14085205
  • [Journal Article] Spiking Neural P systems2006

    • Author(s)
      M. Ionescue, G. Paun, T. Yokomori
    • Journal Title

      Fundamenta Informaticae 71

      Pages: 279-308

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Spiking Neural P systems2006

    • Author(s)
      M.Ionescue, G.Paun, T.Yokomori
    • Journal Title

      Fundamenta Informaticae 71

      Pages: 279-308

    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Probabilistic Inference in Test Tube and Its Application to Gene Expression Profiles2006

    • Author(s)
      Y. Sakakibara, T. Yokomori, S. Kobayashi, A. Suyama
    • Journal Title

      Formal Models, Languages And Applications (edited by Subramanian et al. ), World Scientific Pub. 1

      Pages: 304-319

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Turing machine using RTRACS2006

    • Author(s)
      Akira Suyama, C.Mao, T.Yokomori, B.Zhang
    • Journal Title

      Preliminary proceedings of DNA 12

      Pages: 422-422

    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] A numerical analysis of an autonomous molecular computing system, RTRACS.2006

    • Author(s)
      Masahiro Takinoue, Daisuke Kiga, Akira Suyama, C. Mao, T. Yokomori, B. Zhang
    • Journal Title

      Preliminary proceedings of DNA 12

      Pages: 411-411

    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Spiking Neural P systems2006

    • Author(s)
      M.Ionescue, G.Paun, T.Yokomori
    • Journal Title

      Fundamenta Informaticae Vol.71,Nos.2-3

      Pages: 279-308

    • Data Source
      KAKENHI-PROJECT-14085205
  • [Journal Article] A simple classifications of the volvocine algae by formal languages2005

    • Author(s)
      H.Yoshida, T.Yokomori, A.Suyama
    • Journal Title

      Bull.Math.Biol. 67

      Pages: 1339-1354

    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Two mappings to unify melocular computing models based on DNA complementarity2005

    • Author(s)
      Kaoru Onodera, Takashi Yokomori
    • Journal Title

      Proceedings of 11th International Meeting on DNA Based Computers, London, Ontario

      Pages: 139-150

    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] A simple classifications of the volvocine algae by formal languages2005

    • Author(s)
      H. Yoshida, T. Yokomori, A. Suyama
    • Journal Title

      Bull. Math. Biol. 67

      Pages: 1339-1354

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Linearizer and Doubler : Two mappings to unify melocular computing models based on DNA complementarity2005

    • Author(s)
      Kaoru Onodera, Takashi Yokomori
    • Journal Title

      Proceedings of 11th International Meeting on DNA Based Computers 1

      Pages: 139-150

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Linearizer and Doubler : Two mappings to unify melocular computing models based on DNA complementarity2005

    • Author(s)
      Kaoru Onodera, Takashi Yokomori
    • Journal Title

      Proceedings of 11th International Meeting on DNA Based Computers

      Pages: 139-150

    • Data Source
      KAKENHI-PROJECT-14085205
  • [Journal Article] 分子計算の理論モデル2004

    • Author(s)
      小林聡, 榊原康文, 横森貴
    • Journal Title

      「分子コンピュータの現状と展望」(萩谷編), サイエンス社 1

      Pages: 32-40

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] 分子計算の理論モデル2004

    • Author(s)
      小林 聡, 榊原康文, 横森 貴
    • Journal Title

      分子コンピュータの現状と展望(萩谷編),サイエンス社

      Pages: 32-40

    • Data Source
      KAKENHI-PROJECT-14085205
  • [Journal Article] An Algorithm for Testing Structure Freeness of Biomolecular Sequences2004

    • Author(s)
      Satoshi Kobayashi, Takashi Yokomori, Yasubumi Sakakibara
    • Journal Title

      Lecture Notes in Computer Science Vol.2950

      Pages: 266-277

    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] On the Power of Membrane Division in P Systems2004

    • Author(s)
      Gh. Paun, Y. Suzuki, H. Tanaka, T. Yokomori
    • Journal Title

      Theoretical Computer Science 324

      Pages: 61-85

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] On the Power of Membrane Division in P Systems2004

    • Author(s)
      Gh.Paun, Y.Suzuki, H.Tanaka, T.Yokomori
    • Journal Title

      Theoretical Computer Science 324

      Pages: 61-85

    • Data Source
      KAKENHI-PROJECT-14085205
  • [Journal Article] On the computational power of Insertion-Deletion Systems2003

    • Author(s)
      A. Takahara, T. Yokomori
    • Journal Title

      Natural Computing 2

      Pages: 321-336

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] An Algorithm for Testing Structure Freeness of Biomolecular Sequences2003

    • Author(s)
      Satoshi Kobayashi, Takashi Yokomori, Yasubumi Sakakibara
    • Journal Title

      Lecture Notes in Computer Science 2950

      Pages: 266-277

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] Molecular computing paradigm-toward freedom from Turing's charm2002

    • Author(s)
      Takashi Yokomori
    • Journal Title

      Natural Computing 4

      Pages: 333-390

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] P-systems on Grraphs of restricted forms2002

    • Author(s)
      Gh. Paun, Y. Sakakibara, T. Yokomori
    • Journal Title

      Publ. Math Debrecen 60

      Pages: 635-660

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] A Magic Pot : Self-assembly computation revisited2002

    • Author(s)
      T. Yokomori, Y. Sakakibara, S. Kobayashi
    • Journal Title

      Lecture Notes in Computer Science 2300

      Pages: 418-429

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Journal Article] On the computational power of Insertion-Deletion Systems2002

    • Author(s)
      A. Takahara, T. Yokomori
    • Journal Title

      Proc. of DNA Based Computers (DNA8) 1

      Pages: 139-150

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-14085101
  • [Presentation] Computing with Multisets : A Survey on Reaction Automata Theory2018

    • Author(s)
      F.Okubo and T.Yokomori
    • Organizer
      Computability in Europe 2018
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00021
  • [Presentation] Natural Computing Paradigm ─ A Concise Introduction2018

    • Author(s)
      T.Yokomori
    • Organizer
      International Conf. on Artificial Life and Robotics 2018
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00021
  • 1.  Kobayashi Satoshi (50251707)
    # of Collaborated Projects: 4 results
    # of Collaborated Products: 4 results
  • 2.  鈴木 泰寛 (50292983)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 1 results
  • 3.  有川 節夫 (40037221)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 0 results
  • 4.  上田 和紀 (10257206)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 0 results
  • 5.  TOMITA Etsuji (40016598)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 6.  TAKEDA Mitsuo (00114926)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 7.  TAKAHASHI Haruhisa (90135418)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 8.  Imura Junichi (50252474)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 9.  Hayami Ken (20251358)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 10.  Yannick Rondelez (10548770)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 11.  富樫 敦 (20172140)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 12.  小野 寛晰 (90055319)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 13.  佐藤 優子 (50081419)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 14.  石塚 満 (50114369)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 15.  篠原 武 (60154225)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 16.  原口 誠 (40128450)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 17.  丸岡 章 (50005427)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 18.  榊原 康文 (10287427)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 2 results
  • 19.  楠元 範明 (60277861)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 20.  萩谷 昌己 (30156252)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 21.  小林 重信 (40016697)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 6 results
  • 22.  米澤 明憲 (00133116)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 23.  佐藤 雅彦 (20027387)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 2 results
  • 24.  小長谷 明彦 (00301200)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 25.  塩谷 光彦 (60187333)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 1 results
  • 26.  陶山 明 (90163063)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 7 results
  • 27.  山村 雅幸 (00220442)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 28.  小野 治 (50130802)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 2 results
  • 29.  都甲 潔 (50136529)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 30.  山下 雅史 (00135419)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 31.  小宮 健 (20396790)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 32.  藤本 健造 (90293894)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 33.  原 雄介 (90452135)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 34.  大久保 文哉
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 3 results

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