SEO Tae-kun 徐泰健

Researcher Number	60401189
Affiliation (based on the past Project Information) *help	2011: 東京大学, 大学院・農学生命科学研究科, 特任助教 2008: The University of Tokyo, 大学院農学生命科学研究科, 特任助教 2007 – 2008: The University of Tokyo, 大学院・農学生命科学研究科, 特任助教 2006: 東京大学, 大学院農学生命科学研究科, 特任助手 2005 – 2006: 東京大学, 大学院・農学生命科学研究科, 特任助手
Review Section/Research Field	Principal Investigator Biodiversity/Systematics / Evolutionary biology Except Principal Investigator Statistical science
Keywords	Principal Investigator 分子進化 / 刺胞動物 / ベイズ推定 / 進化速度 / 分岐年代 / 集団遺伝 / ブートストラップ確率 / 距離行列法 / 分子系統樹 Except Principal Investigator convergent evolution … More / Bayesian hierarchical model / recombination / population structure and history / sequence and structure / adaptation to the host / viral evolution / quasispecies / 収斂進化 / 階層ベイズ / ゲノムの組換え / 集団構造と履歴 / 配列進化と構造進化 / 宿主適応 / ウイルス分子進化 Less

ゲノム情報を用いた生物種判別と集団遺伝解析に対する統計的手法の開発Principal Investigator
- Principal Investigator
  
  徐泰健
- Project Period (FY)
  2011
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Biodiversity/Systematics
- Research Institution
  The University of Tokyo
Development of statistical methods for phylogeny reconstruction using multilocus sequence dataPrincipal Investigator
- Principal Investigator
  
  SEO Tae-kun
- Project Period (FY)
  2006 – 2008
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Evolutionary biology
- Research Institution
  The University of Tokyo
Development of Bayesian hierarchical models of genetic diversity and adaptive evolution of micro-organisms in the extreme environments
- Principal Investigator
  
  KISHINO Hirohisa
- Project Period (FY)
  2004 – 2006
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Statistical science
- Research Institution
  THE UNIVERSITY OF TOKYO

All 2012 2011 2009 2008 2007 2006 2005 Other

All Journal Article Presentation

[Journal Article] Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record2012
- Author(s)
  Eunji Park, Dae-Sik Hwang, Jae-Seong Lee, Jun-Im Song, Tae-Kun Seo, Yong-Jin Won
- Journal Title
  
  Molecular Phylogenetics and Evolution
  
  Volume: 62 Issue: 1 Pages: 329-345
- DOI
  10.1016/j.ympev.2011.10.008
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23570108
[Journal Article] Statistical comparison of nucleotide-, amino-acid-, and codon-substit ution models for evolutionary analysis of protein-coding sequences2009
- Author(s)
  Tae-Kun Seo and Hirohisa Kishino
- Journal Title
  
  Systematic Biology (未定)(in press)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] Classification of nucleotide sequences using Support Vector Machines2009
- Author(s)
  Seo T-K
- Journal Title
  
  (submitted)
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] Rates of nucleotide substitution in Cornaceae (Cornales)-correlation between molecular variation and morphological change2008
- Author(s)
  Xiang, Q-Y, Thorne, J, Seo, T-K, Zhang, W., Thomas, D.,Ricklefs, R.
- Journal Title
  
  Molecular Phylogenetics and Evolution 49
  
  Pages: 327-342
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] Rates of nucleotide substitution in Cornaceae (Cornales)-correlation between molecular variation and morphological change, Mol2008
- Author(s)
  Xiang, Q-Y, Thorne, J, Seo, T-K, Zhang, W., Thomas, D.,Ricklefs, R
- Journal Title
  
  Phylogenet. Evol. 49
  
  Pages: 327-342
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] コドンモデルを用いた分岐年代のベイズ推定 (掲載決定)2008
- Author(s)
  徐泰健、岸野洋久、Jeffrey Thorne
- Journal Title
  
  統計数理 (未定)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] コドンモデルを用いた分岐年代のベイズ推定2008
- Author(s)
  徐泰健、岸野洋久、Jeffrey Thorne
- Journal Title
  
  統計数理 56
  
  Pages: 37-54
- NAID
  120006019013
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] 遺伝子型の分子進化と表現型の適応進化(掲載決定)2008
- Author(s)
  渡部輝明、徐泰健、岸野洋久
- Journal Title
  
  統計数理 (未定)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] コドンモデルを用いた分岐年代のベイズ推定2008
- Author(s)
  徐泰健, 岸野洋久, Jeffrey L. Thorne
- Journal Title
  
  統計数理 56
  
  Pages: 37-54
- NAID
  120006019013
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] Calculating Bootstrap Probabilities of Phylogeny Using Multilocus Sequence Data2008
- Author(s)
  Tae-Kun Seo
- Journal Title
  
  Molecular Biology and Evolution 25
  
  Pages: 960-971
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins2008
- Author(s)
  Seo T-K, Kishino H
- Journal Title
  
  Syst. Biol. 57
  
  Pages: 367-377
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins2008
- Author(s)
  Tae-Kun Seo and Hirohisa Kishino
- Journal Title
  
  Systematic Biology (未定)(in press)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] Calculating bootstrap probabilities of phylogeny using multilocus sequence data2008
- Author(s)
  Seo T-K
- Journal Title
  
  Mol. Biol. Evol. 25
  
  Pages: 960-971
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins2008
- Author(s)
  Tae-Kun Seo and Hirohisa Kishino
- Journal Title
  
  Systematic Biology 57
  
  Pages: 367-377
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] 遺伝子型の分子進化と表現型の適応進化2008
- Author(s)
  渡部輝明、徐泰健、岸野洋久
- Journal Title
  
  統計数理 56
  
  Pages: 55-66
- NAID
  120006019009
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] 遺伝子型の分子進化と表現型の適応進化2008
- Author(s)
  渡部輝明, 徐泰健, 岸野洋久
- Journal Title
  
  統計数理 56
  
  Pages: 55-66
- NAID
  120006019009
- Data Source
  KAKENHI-PROJECT-18770216
[Journal Article] Incorporating gene-specific variation when inferring and evaluating optimal evolutionary tree topologies from multilocus sequence data.2005
- Author(s)
  Seo, T.-K., Kishino.H., Thorne, J.L.
- Journal Title
  
  Proceedings of National Academy of Sciences, USA. 102
  
  Pages: 4436-4441
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-16300086
[Journal Article] Incorporating gene-specific variation when inferring and evaluating optimal evolutionary tree topologies from multilocus sequence data.2005
- Author(s)
  Seo, T.-K., Kishino, H., Thorne, J.L
- Journal Title
  
  Proceedings of National Academy of Sciences, USA. 102
  
  Pages: 4436-4441
- Description
  「研究成果報告書概要(欧文)」より
- Data Source
  KAKENHI-PROJECT-16300086
[Journal Article] Incorporating gene-specific variation when inferring and evaluating optimal evolutionary tree topologies from multilocus sequence data.2005
- Author(s)
  Seo T-K, H Kishino, JL Thorne
- Journal Title
  
  Proceedings of National Academy of Sciences, USA. 102
  
  Pages: 4436-4441
- Data Source
  KAKENHI-PROJECT-16300086
[Journal Article] Statistical comparison of nucleotide, amino acid, and codon substitution models for evolutionary analysis of protein-coding sequences
- Author(s)
  Seo T-K, Kishino H
- Journal Title
  
  Syst. Biol. (in press)
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Statistical analysis of molecular sequences for phylogenetics and population genetics(韓国語訳)2011
- Author(s)
  徐泰健
- Organizer
  韓国海洋生物科学研究者協議会
- Place of Presentation
  韓国海洋研究院(招待セミナー)
- Year and Date
  2011-11-28
- Data Source
  KAKENHI-PROJECT-23570108
[Presentation] Statistical Comparison of Nucleotide-, Amino-Acid-, and Codon-Substitution Models for Evolutionary Analysis of Protein-Coding Sequences2008
- Author(s)
  Seo, T-K, Kishino, H
- Organizer
  SMBE meeting
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Statistical Comparison of Nucleotide-, Amino-Acid-, and Codon-Substitution Models for Evolutionary Analysis of Protein-Coding Sequences2008
- Author(s)
  Seo, T-K, Kishino, H
- Organizer
  日本進化学会
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Statistical comparison of nucleotide-, amino-acid-, and codon-substit ution models for evolutionary analysis of protein-coding sequences2008
- Author(s)
  Tae-Kun Seo and Hirohisa Kishino
- Organizer
  Annual Meeting of SMBE 2008
- Place of Presentation
  Barcelona, Spain
- Year and Date
  2008-06-06
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Statistical comparison of nucleotide-, amino-acid-, and codon-substit ution models for evolutionary analysis of protein-coding sequences2008
- Author(s)
  Tae-Kun Seo and Hirohisa Kishino
- Organizer
  日本進化学会
- Place of Presentation
  東京
- Year and Date
  2008-08-25
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Bayesian Divergence Time Estimation Using Codon Models2007
- Author(s)
  Tae-Kun Seo
- Organizer
  Annual meeting of the Korean Society of Biological Sciences
- Place of Presentation
  Seoul, Korea
- Year and Date
  2007-08-17
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins2007
- Author(s)
  徐泰健
- Organizer
  第九回日本進化学会
- Place of Presentation
  京都
- Year and Date
  2007-09-01
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Synonymous substitution substantially improve evolutionary inference from highly diverged proteins2007
- Author(s)
  Seo, T-K., Kishino, H
- Organizer
  SMBE meeting
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins2007
- Author(s)
  Tae-Kun Seo
- Organizer
  Annual meeting of the Society of Molecular Biology and Evolution
- Place of Presentation
  Halifax, Canada
- Year and Date
  2007-06-27
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Synonymous substitution substantially improve evolutionary inference from highly diverged proteins2007
- Author(s)
  Seo, T-K, Kishino, H
- Organizer
  日本進化学会
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Calculating bootstrap probabilities of phylogeny using multilocus sequence data2006
- Author(s)
  Seo, T-K
- Organizer
  SMBE meeting
- Data Source
  KAKENHI-PROJECT-18770216
[Presentation] Thorne Estimating absolute rates of synonymous and nonsynonymous nucleotide substitution in order to characterize natural selection and date species divergences2006
- Author(s)
  Seo T-K, Kishino H. Jeffrey L
- Organizer
  日本進化学会
- Data Source
  KAKENHI-PROJECT-18770216

1. KISHINO Hirohisa (00141987)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
2. KITAZOE Yasuhiro (90112010)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. WATABE Teruaki (90325415)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

SEO Tae-kun 徐 泰健

Research Projects

Research Products

Co-Researchers

ゲノム情報を用いた生物種判別と集団遺伝解析に対する統計的手法の開発Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Development of statistical methods for phylogeny reconstruction using multilocus sequence dataPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Development of Bayesian hierarchical models of genetic diversity and adaptive evolution of micro-organisms in the extreme environments

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record2012

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Statistical comparison of nucleotide-, amino-acid-, and codon-substit ution models for evolutionary analysis of protein-coding sequences2009

Author(s)

Journal Title

Data Source

[Journal Article] Classification of nucleotide sequences using Support Vector Machines2009

Author(s)

Journal Title

Data Source

[Journal Article] Rates of nucleotide substitution in Cornaceae (Cornales)-correlation between molecular variation and morphological change2008

Author(s)

Journal Title

Data Source

[Journal Article] Rates of nucleotide substitution in Cornaceae (Cornales)-correlation between molecular variation and morphological change, Mol2008

Author(s)

Journal Title

Data Source

[Journal Article] コドンモデルを用いた分岐年代のベイズ推定 (掲載決定)2008

Author(s)

Journal Title

Data Source

[Journal Article] コドンモデルを用いた分岐年代のベイズ推定2008

Author(s)

Journal Title

NAID

Data Source

[Journal Article] 遺伝子型の分子進化と表現型の適応進化(掲載決定)2008

Author(s)

Journal Title

Data Source

[Journal Article] コドンモデルを用いた分岐年代のベイズ推定2008

Author(s)

Journal Title

NAID

Data Source

[Journal Article] Calculating Bootstrap Probabilities of Phylogeny Using Multilocus Sequence Data2008

Author(s)

Journal Title

Data Source

[Journal Article] Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins2008

Author(s)

Journal Title

Data Source

[Journal Article] Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins2008

Author(s)

Journal Title

Data Source

[Journal Article] Calculating bootstrap probabilities of phylogeny using multilocus sequence data2008

Author(s)

Journal Title

Data Source

[Journal Article] Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins2008

Author(s)

Journal Title

SEO Tae-kun 徐泰健