Naito Yuki 内藤雄樹

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NAITO Yuki 内藤雄樹

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Researcher Number	60451829
Other IDs
Affiliation (Current)	2025: 東京科学大学, 総合研究院, 特任准教授
Affiliation (based on the past Project Information) *help	2014 – 2015: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイ, ライフサイエンス統合データベースセンター, 特任助教 2012: ライフサイエンスデータベース統合センター, 特任助教 2010: The University of Tokyo, 大学院・理学系研究科, 特任助教 2009: The University of Tokyo, 大学院・理学系研究科, 助教 2008: The University of Tokyo, 大学院・理学系研究科, 特任助教
Review Section/Research Field	Principal Investigator Genome biology / Molecular biology Except Principal Investigator 基礎ゲノム科学 / Science and Engineering
Keywords	Principal Investigator CRISPRdirect / GGGenome / GGRNA / 塩基配列検索 / トランスクリプトーム / 遺伝子検索システム / マイクロRNA Except Principal Investigator 遺伝子 / ADAR / ２本鎖RNA結合タンパク質 … More / RNA結合タンパク質 / プロセシング / 発現調節 / noncoding RNA / miRNA / microRNA / ゲノム調節 / マイクロアレイ / バイオテクノロジー / ゲノム / RNA干渉 Less

Transcript-oriented search engine for genes and transcriptsPrincipal Investigator
- Principal Investigator
  
  Naito Yuki
- Project Period (FY)
  2014 – 2015
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Genome biology
- Research Institution
  大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイエンス統合データベースセンター)
Functional analysis of genes associated with miRNA expression
- Principal Investigator
  
  UI-TEI Kumiko
- Project Period (FY)
  2009 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  基礎ゲノム科学
- Research Institution
  The University of Tokyo
RNA干渉による1遺伝子特異的発現抑制システムの構築
- Principal Investigator
  
  UI-TEI Kumiko
- Project Period (FY)
  2008 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Science and Engineering
- Research Institution
  The University of Tokyo
Analysis of the microRNA regulatory mechanisms based on the development of human microRNA expression vectorsPrincipal Investigator
- Principal Investigator
  
  NAITO Yuki
- Project Period (FY)
  2008 – 2010
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Molecular biology
- Research Institution
  The University of Tokyo

All 2015 2014 2013 2012 2011 2010 2009 2008 Other

All Journal Article Presentation Book Patent

[Book] 実験医学増刊：今日から使える！データベース・ウェブツール達人になるための実践ガイド1002014
- Author(s)
  内藤雄樹（編集）
- Total Pages
  248
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-26830129
[Book] 改訂第5版新遺伝子工学ハンドブック2010
- Author(s)
  内藤雄樹
- Publisher
  培養細胞での遺伝子ノックダウン法哺乳類細胞での標的遺伝子を特異的にノックダウンできるsiRNAの選択法
- Data Source
  KAKENHI-PROJECT-21310123
[Book] 改訂第5版新遺伝子工学ハンドブック2010
- Author(s)
  内藤雄樹、程久美子
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-21310123
[Book] RNA工学の基礎と応用(普及版)2010
- Author(s)
  内藤雄樹、山田智之、程久美子、森下真一、西郷薫
- Publisher
  シーエムシー出版
- Data Source
  KAKENHI-PROJECT-21310123
[Book] RNA工学の基礎と応用(普及版)2010
- Author(s)
  内藤雄樹
- Publisher
  効率的なsiRNAの設計
- Data Source
  KAKENHI-PROJECT-21310123
[Book] Gene Silencing: Theory Techniques and Applications2010
- Author(s)
  Narikawa K , Nishi K, Naito Y, Mazda M, Ui-Tei K
- Publisher
  Nova Science Publishers
- Data Source
  KAKENHI-PROJECT-21310123
[Book] Experimental validation of published siRNA design algorithms In : Small Interfering RNA : New Research2009
- Author(s)
  Naito, Y., ら
- Total Pages
  265
- Publisher
  Nova Science Publishers
- Data Source
  KAKENHI-PROJECT-20770133
[Book] Experimental validatio of published siRNA design algorithms(Small Interfering RNA : New Research)2009
- Author(s)
  Naito Y, Saigo K, Ui-Tei K.
- Publisher
  Nova Science Publishers.
- Data Source
  KAKENHI-PROJECT-20770133
[Book] Proceedings of the 2008 Micro-NanoMechatronics and Human Science (MHS2008)2009
- Author(s)
  Naito, Y.
- Publisher
  Functional shRNA expression system with reduced off-target effect.(In press)
- Data Source
  KAKENHI-PROJECT-20034011
[Book] RNA interference Research Progress2008
- Author(s)
  Naito, Y.
- Publisher
  Evaluation of published rational siRNA design algorithms using firefly luciferase gene as a reporter
- Data Source
  KAKENHI-PROJECT-20034011
[Journal Article] CRISPRdirect: software for designing CRISPR/Cas guide RNA with reduced off-target sites.2014
- Author(s)
  Naito Y, Hino K, Bono H, UI-Tei K.
- Journal Title
  
  Bioinformatics
  
  Volume: Vol.31 Issue: 7 Pages: 1-4
- DOI
  10.1093/bioinformatics/btu743
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-21115004, KAKENHI-PUBLICLY-26102713, KAKENHI-PROJECT-26830129, KAKENHI-PROJECT-15H04319
[Journal Article] GGRNA：キーワードや配列から遺伝子をGoogleのように検索2014
- Author(s)
  内藤雄樹
- Journal Title
  
  実験医学増刊（今日から使える！データベース・ウェブツール）
  
  Volume: Vol.32, No.20 Pages: 78-79
- Data Source
  KAKENHI-PROJECT-26830129
[Journal Article] CRISPRdirect：CRISPR/Cas9ゲノム編集法のガイドRNA設計ツール2014
- Author(s)
  日野公洋，内藤雄樹，坊農秀雅，程久美子
- Journal Title
  
  実験医学増刊（今日から使える！データベース・ウェブツール）
  
  Volume: Vol.32, No.20 Pages: 114-115
- Data Source
  KAKENHI-PROJECT-26830129
[Journal Article] GGGenome：高速な塩基配列の検索ツール2014
- Author(s)
  内藤雄樹
- Journal Title
  
  実験医学増刊（今日から使える！データベース・ウェブツール）
  
  Volume: Vol.32, No.20 Pages: 102-103
- Data Source
  KAKENHI-PROJECT-26830129
[Journal Article] Designing functional siRNA with reduced off-target effects.2013
- Author(s)
  Naito Y, Ui-Tei K.
- Journal Title
  
  Methods Mol. Biol.
  
  Volume: 942 Pages: 57-68
- DOI
  10.1007/978-1-62703-119-6_3
- ISBN
  9781627031189, 9781627031196
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-21115004, KAKENHI-PROJECT-21310123, KAKENHI-PROJECT-23651200
[Journal Article] Designing functional siRNA with reduced off-target effects."siRNA Design"2013
- Author(s)
  Naito Y, Ui-Tei K.
- Journal Title
  
  Methods Mol. Biol.
  
  Volume: vol.942 Pages: 57-68
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] siRNA design software for a target gene-specific RNA interference.2012
- Author(s)
  Naito Y, Ui-Tei K
- Journal Title
  
  Front. Genet.
  
  Volume: vol.3 Pages: 102-102
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] siRNA design software for a target gene-specific RNA interference.2012
- Author(s)
  Yuki Naito
- Journal Title
  
  Front. Genet.
  
  Volume: 3 Pages: 102-102
- DOI
  10.3389/fgene.2012.00102
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123, KAKENHI-PROJECT-23651200, KAKENHI-PLANNED-21115004
[Journal Article] Designing functional siRNA with reduced off-target effects.2011
- Author(s)
  Naito Y, Ui-Tei K
- Journal Title
  
  Methods in Molecular Biology
  
  Volume: (掲載確定)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Designing functional siRNA with reduced off-target effects.2011
- Author(s)
  Naito Y, Ui-Tei K.
- Journal Title
  
  Methods in Molecular Biology in press.
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] E-cadherin is transcriptionally activated via suppression of ZEB1 transcriptional repressor by small RNA-mediated gene silencing.2011
- Author(s)
  Mazda M, Nishi K, Naito Y, Ui-Tei K.
- Journal Title
  
  PLoSONE
  
  Volume: vol.6
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] Genome-wide identification and analysis of miRNAs complementary to upstream sequences of mRNA transcription start sites.2010
- Author(s)
  Narikawa K, Nishi K, Naito Y, Yonezawa S, Mazda M, Ui-Tei K
- Journal Title
  
  Gene Silencing : Theory, Techniques and Applications
  
  Pages: 287-319
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Functional shRNA expression system with reduced off-target effects2010
- Author(s)
  Naito, Y.
- Journal Title
  
  Proceedings of the 2009 Micro-NanoMechatronics and Human Science (MHS2009)
  
  Pages: 291-297
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] Genome-wide identification and analysis of miRNAs complementary to upstream sequences of mRNA transcription start sites.2010
- Author(s)
  Narikawa K, Nishi K, Naito Y, Yonezawa S, Mazda M, Ui-Tei K.
- Journal Title
  
  Gene Silencing : Theory, Techniques and Applications
  
  Pages: 287-319
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Functional shRNA expression system with reduced off-target effects.2009
- Author(s)
  Naito Y, Nishi K, Juni A, Ui-Tei K.
- Journal Title
  
  Proceedings of the 2009 Micro-Nano Mechatronics and Human Science (MHS2009)
  
  Pages: 291-297
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Reduced base-base interactions between the DNA seed and RNA target are themajor determinants of a significant reduction in the off-target effect due to DNA-seed-containing siRNA.2009
- Author(s)
  Ui-Tei K, Nishi K, Naito Y, Zenno S, Juni A, Saigo K.
- Journal Title
  
  Proceedings of the 2009 Micro-NanoMechatronics and Human Science(MHS2009)
  
  Pages: 298-304
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] siDirect 2.0: updated software for designing functional siRNA with reduced seed-dependent off-target effect.2009
- Author(s)
  Naito Y, Yoshimura J, Morishita S, Ui-Tei K.
- Journal Title
  
  BMC Bioinformatics
  
  Volume: vol.10 Pages: 392-392
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] Reduced base-base interactions between the DNA seed and RNA target are the major determinants of a significant reduction in the off-target effect due to DNA-seed-containing siRNA.2009
- Author(s)
  Ui-Tei K, Nishi K, Naito Y, Zenno S, Juni A, Saigo K.
- Journal Title
  
  Proceedings of the 2009 Micro-Nano Mechatronics and Human Science(MHS2009)
  
  Pages: 298-304
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Reduced base-base interactions between the DNA seed and RNA target are the major determinants of a significant reduction in the off-target effect due to DNA-seed-containing siRNA2009
- Author(s)
  Ui-Tei K, Nishi K, Naito Y, Zenno S, Juni A, Saigo K
- Journal Title
  
  Proceedings of the 2009 Micro-Nano Mechatronics and Human Science
  
  Pages: 298-304
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Functional shRNA expression system with reduced off-target effects.2009
- Author(s)
  Naito Y, Nishi K, Juni A, Ui-Tei K.
- Journal Title
  
  Proceedings of the2009 Micro-NanoMechatronics and Human Science (MHS2009)
  
  Pages: 291-297
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] Experimental validation of published siRNA design algorithms.2009
- Author(s)
  Naito, Y. ら
- Journal Title
  
  Small Interfering RNA : New Research 印刷中(掲載確定)
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Bipartite roles of the central region of the siRNA guide strand in RNA interference due to modified siRNA with a DNA seed arm.2009
- Author(s)
  Ui-Tei K, Naito Y, Zenno S, Nishi K, Juni A, Tanaka A, Saigo K.
- Journal Title
  
  Research Advances in Nucleic Acids Research 3
  
  Pages: 1-17
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Functional shRNA expression system with reduced off-target effects2009
- Author(s)
  Naito, Y., ら
- Journal Title
  
  Proceedings of the 2009 Micro-Nano Mechatronics and Human Science
  
  Pages: 291-297
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Bipartite roles of the central region of the siRNA guide strand in RNA interference due to modified siRNA with a DNA seed arm.2009
- Author(s)
  Ui-Tei K, Naito Y, Zenno S, Nishi K, Juni A, Tanaka A, Saigo K.
- Journal Title
  
  Research Advances in Nucleic Acids Research
  
  Volume: vol. 3 Pages: 1-17
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] Experimental validation of published siRNA design algorithms.2009
- Author(s)
  Naito Y, Saigo K, Ui-Tei K.
- Journal Title
  
  Small Interfering RNA: New Research
  
  Pages: 185-194
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] siDirect 2.0 : updated software for designing functional siRNA with reduced seed-dependent off-target effect.2009
- Author(s)
  Naito, Y.
- Journal Title
  
  BMC Bioinformatics 10
  
  Pages: 392-392
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21310123
[Journal Article] siDirect 2.0 : updated software for designing functional siRNA with reduced seed-dependent off-target effect2009
- Author(s)
  Naito, Y., ら
- Journal Title
  
  BMC Bioinformatics 10
  
  Pages: 392-392
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] siDirect 2.0 : updated software for designing functional siRNA with reduced seed-dependent off-target effect.2009
- Author(s)
  Naito Y, Yoshimura J, Morishita S, Ui-Tei K.
- Journal Title
  
  BMC Bioinformatics 10
  
  Pages: 392-392
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] DNA-modified siRNA-dependent gene silencing with reduced off-target effect is induced through a pathway parallel to that for siRNA-mediated RNA interference.2008
- Author(s)
  Ui-Tei K, Zenno S, Naito Y, Takahashi F, Nishi K, Juni A, Tanaka A, Saigo K.
- Journal Title
  
  Proceedings of the 2008 Micro-Nano Mechatronics and Human Science (MHS2008)
  
  Pages: 339-345
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Thermodynamic stability and Watson-Crick base pairing in the seed duplex are major determinants of the efficiency of the siRNA-based off-target effect.2008
- Author(s)
  Ui-Tei K, Naito Y, Nishi K, Juni A, Saigo K.
- Journal Title
  
  Nucleic Acids Res. 36
  
  Pages: 7100-7109
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Evaluation of published rational iRNA design algorithms using firefly luciferase gene as a reporter.2008
- Author(s)
  Naito Y, Saigo K, Ui-Tei K.
- Journal Title
  
  RNA interference research progress
  
  Pages: 3-11
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Journal Article] Evaluation of published rational siRNA design algorithms using firefly luciferase gene as a reporter.2008
- Author(s)
  Naito, Y. ら
- Journal Title
  
  RNA interference research progress
  
  Pages: 3-11
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20770133
[Patent] RNA干渉ポリヌクレオチド混合物の設計装置、RNA干渉ポリヌクレオチド混合物の作製方法、及びRNA2010
- Inventor(s)
  武部豊、内藤雄樹、西郷薫、名取幸和
- Industrial Property Rights Holder
  国立感染症研究所長、国立大学法人東京大学、(株)アルファジェン
- Filing Date
  2010-12-10
- Data Source
  KAKENHI-PROJECT-20770133
[Presentation] GGRNA/GGGenome：塩基配列データベースをすばやく検索するウェブサーバ2015
- Author(s)
  内藤雄樹, 坊農秀雅
- Organizer
  BMB2015（第38回日本分子生物学会年会、第88回日本生化学会大会合同大会）
- Place of Presentation
  神戸ポートアイランド（兵庫県神戸市）
- Year and Date
  2015-12-01
- Data Source
  KAKENHI-PROJECT-26830129
[Presentation] CRISPR/Cas9ゲノム編集法のためのウェブツール2015
- Author(s)
  内藤雄樹, 坊農秀雅
- Organizer
  第13回がんとハイポキシア研究会
- Place of Presentation
  国立遺伝学研究所（静岡県三島市）
- Year and Date
  2015-06-05
- Data Source
  KAKENHI-PROJECT-26830129
[Presentation] GGRNA/GGGenome：塩基配列データベースをすばやく検索するウェブツール2015
- Author(s)
  内藤雄樹
- Organizer
  トーゴーの日シンポジウム2015
- Place of Presentation
  東京大学弥生講堂一条ホール（東京都文京区）
- Year and Date
  2015-10-05
- Data Source
  KAKENHI-PROJECT-26830129
[Presentation] CRISPRdirect : web-based tool for designing CRISPR/Cas guide RNA with reduced off-target sites2015
- Author(s)
  Naito Y, Hino K, Ui-Tei K, Bono H
- Organizer
  CRISPR 2015 Oxford
- Place of Presentation
  Oxford, UK
- Year and Date
  2015-03-23
- Data Source
  KAKENHI-PROJECT-26830129
[Presentation] ゲノム編集のオフターゲット効果を防ぐための塩基配列検索ツール2015
- Author(s)
  内藤雄樹, 坊農秀雅
- Organizer
  NGS現場の会第四回研究会
- Place of Presentation
  つくば国際会議場（茨城県つくば市）
- Year and Date
  2015-07-02
- Data Source
  KAKENHI-PROJECT-26830129
[Presentation] Gapmer型アンチセンスによる相補結合依存的オフターゲット効果の安全性評価手法構築に向けた基盤研究2015
- Author(s)
  吉田徳幸, 内藤雄樹, 佐々木澄美, 内田恵理子, 小比賀聡, 佐藤陽治, 内藤幹彦, 井上貴雄
- Organizer
  日本核酸医薬学会第1回年会
- Place of Presentation
  京都テルサ（京都府京都市）
- Year and Date
  2015-11-30
- Data Source
  KAKENHI-PROJECT-26830129
[Presentation] siDirect 2.0 : an Updated Website to Select Functional, Target-specific siRNA with Reduced Seed-dependent Off-target Effect for Mammalian Functional Genomics2010
- Author(s)
  Naito Y, Yoshimura J, Morishita S, Ui-Tei K
- Organizer
  The 19th CDB Meeting "RNA Sciences in Cell and Developmental Biology"
- Place of Presentation
  神戸市理化学研究所発生・再生科学総合研究センター
- Data Source
  KAKENHI-PROJECT-20770133
[Presentation] siDirect 2.0 : an Updated Website to Select Functional, Target-specific siRNA with Reduced Seed-dependent Off-target Effect for Mammalian Functional Genomics.2010
- Author(s)
  Naito Y, Yoshimura J, Morishita S, Ui-Tei K.
- Organizer
  The 19th CDB Meeting "RNA Sciences in Cell and Developmental Biology"
- Place of Presentation
  Kobe.
- Year and Date
  2010-05-10
- Data Source
  KAKENHI-PROJECT-20770133
[Presentation] siRNAのseed配列によるオフターゲット効果を最少とし、標的mRNA特異的抑制効果を示すsiRNA設計ウェブサーバの構築2010
- Author(s)
  内藤雄樹
- Organizer
  第10回東京大学生命科学シンポジウム
- Place of Presentation
  東京大学
- Year and Date
  2010-05-01
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] siDirect 2.0: an Updated Website to Select Functional,Target-specific siRNA with Reduced Seed-dependent Off-target Effect for Mammalian Functional Genomics2010
- Author(s)
  Yuki Naito , Jun Yoshimura, Shinichi Morishita, Kumiko Ui-Tei
- Organizer
  The 19th CDB Meeting "RNA Sciences in Cell and Developmental Biology
- Place of Presentation
  RIKEN CDB
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] 高いゲノム多様性をもつHIV-1を標的とする至適siRNAの設計2010
- Author(s)
  内藤雄樹、程久美子
- Organizer
  第20回日本数理生物学会年会
- Place of Presentation
  北海道大学学術交流会館
- Year and Date
  2010-09-16
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] siRNA非シード部位と二本鎖RNA結合タンパク質TRBPの相互作用2010
- Author(s)
  日比生直樹、長田喜郎、内藤雄樹、西賢二、程久美子
- Organizer
  BMB2010
- Place of Presentation
  神戸ポートアイランド
- Year and Date
  2010-12-09
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] 高いゲノム多様性をもつHIV-1を標的とする至適siRNAの設計2010
- Author(s)
  内藤雄樹
- Organizer
  第20回日本数理生物学会年会
- Place of Presentation
  札幌市北海道大学学術交流会館
- Year and Date
  2010-09-16
- Data Source
  KAKENHI-PROJECT-20770133
[Presentation] 高いゲノム多様性をもつHIV-1を標的とする至適siRNAの設計2009
- Author(s)
  内藤雄樹
- Organizer
  第20回日本数理生物学会年会
- Place of Presentation
  札幌
- Year and Date
  2009-09-16
- Data Source
  KAKENHI-PROJECT-20770133
[Presentation] siDrect2.0 : a website updated to select functional siRNA with reduced off-targeteffect for functional genomics2009
- Author(s)
  内藤雄樹
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  横浜
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] Functional shRNA expression system with reduced off-target effects2009
- Author(s)
  Naito Y , Nishi K, Juni A, Ui-Tei K
- Organizer
  2009 InternationalSymposium on Micro-NanoMechatronics and Human Science(MHS2009)
- Place of Presentation
  Toyoda Auditorium, Nagoya University.
- Year and Date
  2009-11-10
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] siDrect2.0 : a website updated to select functional siRNA with reduced off-target effect for functional genomics2009
- Author(s)
  内藤雄樹, ら
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-20770133
[Presentation] Functional shRNA expression system with reduced off-target effects2009
- Author(s)
  Naito, Y.
- Organizer
  MHS2009
- Place of Presentation
  名古屋
- Year and Date
  2009-11-09
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] Small RNAシード領域の熱力学的安定性に依存したサイレンシング効果2009
- Author(s)
  長田喜郎、西賢二、内藤雄樹、程久美子
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2009-01-29
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] Reduced base-base interactions between the DNA seed and RNAtarget are the major determinants of a significant reduction in the off-target effect due to DNA-seed-containing siRNA2009
- Author(s)
  Ui-Tei K, Nishi K, Naito Y, Zenno S, Juni A, Saigo, K
- Organizer
  2009 International Symposium on Micro-NanoMechatronics and Human Science(MHS2009)
- Place of Presentation
  Toyoda Auditorium, Nagoya University.
- Year and Date
  2009-11-09
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] siDirect2.0 : a website updated to select functional siRNA with reduced off-target effect for functional genomics.2009
- Author(s)
  内藤雄樹, 吉村淳, 森下真一, 程久美子
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2009-12-11
- Data Source
  KAKENHI-PROJECT-20770133
[Presentation] siDrect2.0:a website updated to select functional siRNA with reduced off-target effect for functional genomics2009
- Author(s)
  内藤雄樹、吉村淳、森下真一、程久美子
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2009-12-09
- Data Source
  KAKENHI-PROJECT-21310123
[Presentation] GGRNA and GGGenome: ultrafast search engines for nucleotide sequence database
- Author(s)
  Naito Y, Bono H
- Organizer
  Genome Informatics 2014
- Place of Presentation
  Cambridge, UK
- Year and Date
  2014-09-21 – 2014-09-24
- Data Source
  KAKENHI-PROJECT-26830129
[Presentation] ゲノム編集のオフターゲット効果を防ぐための塩基配列検索技術
- Author(s)
  内藤雄樹，坊農秀雅
- Organizer
  第4回ゲノム編集研究会
- Place of Presentation
  広島
- Year and Date
  2014-10-05 – 2014-10-07
- Data Source
  KAKENHI-PROJECT-26830129
[Presentation] 統合遺伝子検索GGRNAと高速塩基配列検索GGGenome：塩基配列データベースをすばやく検索するウェブサーバ
- Author(s)
  内藤雄樹，坊農秀雅
- Organizer
  第37回日本分子生物学会年会
- Place of Presentation
  横浜
- Year and Date
  2014-11-25 – 2014-11-27
- Data Source
  KAKENHI-PROJECT-26830129

1. UI-TEI Kumiko (50213327)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
2. NISHI Kenji (50466801)

# of Collaborated Projects: 2 results

# of Collaborated Products: 10 results
3. 宇井久美子

# of Collaborated Projects: 0 results

# of Collaborated Products: 20 results

Naito Yuki 内藤 雄樹

NAITO Yuki 内藤 雄樹

Research Projects

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Transcript-oriented search engine for genes and transcriptsPrincipal Investigator

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Functional analysis of genes associated with miRNA expression

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RNA干渉による1遺伝子特異的発現抑制システムの構築

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Analysis of the microRNA regulatory mechanisms based on the development of human microRNA expression vectorsPrincipal Investigator

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[Book] 実験医学増刊：今日から使える！ データベース・ウェブツール 達人になるための実践ガイド1002014

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[Book] 改訂第5版新遺伝子工学ハンドブック2010

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[Book] 改訂第5版新遺伝子工学ハンドブック2010

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[Book] RNA工学の基礎と応用(普及版)2010

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[Book] RNA工学の基礎と応用(普及版)2010

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[Book] Gene Silencing: Theory Techniques and Applications2010

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[Book] Experimental validation of published siRNA design algorithms In : Small Interfering RNA : New Research2009

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[Book] Experimental validatio of published siRNA design algorithms(Small Interfering RNA : New Research)2009

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[Book] Proceedings of the 2008 Micro-NanoMechatronics and Human Science (MHS2008)2009

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[Book] RNA interference Research Progress2008

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[Journal Article] CRISPRdirect: software for designing CRISPR/Cas guide RNA with reduced off-target sites.2014

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[Journal Article] GGRNA：キーワードや配列から遺伝子をGoogleのように検索2014

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Naito Yuki 内藤雄樹

NAITO Yuki 内藤雄樹

[Book] 実験医学増刊：今日から使える！データベース・ウェブツール達人になるための実践ガイド1002014