Yabe Shuhei 矢部修平

Researcher Number	60564838
Other IDs	https://orcid.org/0000-0003-3450-8761
Affiliation (Current)	2025: 国立研究開発法人理化学研究所, 環境資源科学研究センター, 研究員
Affiliation (based on the past Project Information) *help	2025: 国立研究開発法人理化学研究所, 環境資源科学研究センター, 研究員 2016 – 2021: 東北大学, 農学研究科, 准教授 2018: 東北大学, (連合)農学研究科(研究院), 准教授 2015: 東北大学, (連合)農学研究科(研究院), 准教授
Review Section/Research Field	Principal Investigator Basic Section 38020:Applied microbiology-related / Basic Section 17050:Biogeosciences-related / Natural medicines / Applied microbiology Except Principal Investigator Basic Section 41050:Environmental agriculture-related / Food Cycle Research
Keywords	Principal Investigator クテドノバクテリア / 二次代謝物 / 火山 / 光合成 / ボルカニミクロビウム / Vulcanimicrobiota / Dictyobacteraceae / 天狗の麦飯 / 二次代謝物物 / 難培養微生物 … More / 放線菌 / 光合成細菌 / 南極 / Eremiobacterota / WPS-2 / 二次代謝産物 … More Except Principal Investigator 炭素吸収 / 生物農薬 / 植物病害 / Chryseobacteria / 応用微生物学 / バイオコントロール / 微生物農薬 / コンポスト Less

新門Vulcanimicrobiota（WPS-2）の培養化によって解き明かされる新しい光合成様式Principal Investigator
- Principal Investigator
  
  矢部修平
- Project Period (FY)
  2025 – 2029
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 17050:Biogeosciences-related
- Research Institution
  Institute of Physical and Chemical Research
Elucidating the significance of trans-root organic component absorption in agro-forest ecosystems.
- Principal Investigator
  
  二瓶直登
- Project Period (FY)
  2025 – 2029
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 41050:Environmental agriculture-related
- Research Institution
  Fukushima University
南極洞窟に優占棲息する新奇生物資源クテドノバクテリア菌株の拡充と生理特性の解析Principal Investigator
- Principal Investigator
  
  矢部修平
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Fund for the Promotion of Joint International Research (Fostering Joint International Research (A))
- Review Section
  
  Basic Section 38020:Applied microbiology-related
- Research Institution
  Tohoku University
Could "Ktedonobacteria" be a new group of useful bacteria comparable to actinomycetes?Principal Investigator
- Principal Investigator
  
  Shuhei Yabe
- Project Period (FY)
  2018 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 38020:Applied microbiology-related
- Research Institution
  Tohoku University
Improvement of biocontrol activity in industrial-scale composters and screening of microorganisms showing biocontrol activities from the composters
- Principal Investigator
  
  Abe Keietsu
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Food Cycle Research
- Research Institution
  Tohoku University
Analyzing of microbiome of a poor understanding group 'Ktedonobacteria' with Actinomycetes-Like Morphology and exploration of new bioactive compounds from the group.Principal Investigator
- Principal Investigator
  
  Yabe Shuhei
- Project Period (FY)
  2016 – 2017
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Natural medicines
- Research Institution
  Tohoku University
放線菌に次ぐ新しい微生物資源「クテドノバクテリア」の開拓Principal Investigator
- Principal Investigator
  
  矢部修平
- Project Period (FY)
  2015
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Research Field
  
  Applied microbiology
- Research Institution
  Tohoku University

All 2021 2019 2018 2017 2016 2015

All Journal Article Presentation

[Journal Article] Reticulibacter mediterranei gen. nov., sp. nov., within the new family Reticulibacteraceae fam. nov., and Ktedonospora formicarum gen. nov., sp. nov., Ktedonobacter robiniae sp. nov., Dictyobacter formicarum sp. nov. and Dictyobacter arantiisoli sp. nov., belonging to the class Ktedonobacteria2021
- Author(s)
  Yabe Shuhei、Zheng Yu、Wang Chiung-mei、Sakai Yasuteru、Abe Keietsu、Yokota Akira、Donadio Stefano、Cavaletti Linda、Monciardini Paolo
- Journal Title
  
  International Journal of Systematic and Evolutionary Microbiology
  
  Volume: 71 Issue: 7
- DOI
  10.1099/ijsem.0.004883
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K05406, KAKENHI-PROJECT-18KK0424
[Journal Article] High cellulolytic potential of the Ktedonobacteria lineage revealed by genome-wide analysis of CAZymes2021
- Author(s)
  Zheng Yu、Maruoka Mayumi、Nanatani Kei、Hidaka Masafumi、Abe Naoki、Kaneko Jun、Sakai Yasuteru、Abe Keietsu、Yokota Akira、Yabe Shuhei
- Journal Title
  
  Journal of Bioscience and Bioengineering
  
  Volume: in press Issue: 6 Pages: 622-630
- DOI
  10.1016/j.jbiosc.2021.01.008
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18KK0424, KAKENHI-PROJECT-18K05406
[Journal Article] Genome Features and Secondary Metabolites Biosynthetic Potential of the Class Ktedonobacteria2019
- Author(s)
  Yu ZHENG, Ayana Saitou, Chiung-Mei Wang, Atsushi Toyoda, Yohei Minakuchi, Yuji Sekiguchi, Kenji Ueda, Hideaki Takano, Yasuteru Sakai, Keietsu Abe, Akira Yokota and Shuhei Yabe
- Journal Title
  
  Frontiers in Microbiology
  
  Volume: 10 Pages: 893-893
- DOI
  10.3389/fmicb.2019.00893
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16H06279, KAKENHI-PROJECT-18K05406
[Journal Article] Formation of sporangiospores in Dictyobacter aurantiacus (class Ktedonobacteria in phylum Chloroflexi)2019
- Author(s)
 Yabe Shuhei、Wang Chiung-mei、Zheng Yu、Sakai Yasuteru、Abe Keietsu、Yokota Akira
- Journal Title
 
 J. Gen. Appl. Microbiol.
 
 Volume: 65 Issue: 6 Pages: 316-319
- DOI
 10.2323/jgam.2019.01.001
- NAID
 130007792579
- ISSN
 0022-1260, 1349-8037
- Language
 English
- Data Source
 KAKENHI-PROJECT-18K05406
[Journal Article] Tengunoibacter tsumagoiensis gen. nov., sp. nov., Dictyobacter kobayashii sp. nov., Dictyobacter alpinus sp. nov., and description of Dictyobacteraceae fam. nov. within the order Ktedonobacterales isolated from Tengu-no-mugimeshi, a soillike granular mass of micro-organisms, and emended descriptions of the genera Ktedonobacter and Dictyobacter2019
- Author(s)
  Chiung-mei Wang, Yu Zheng, Yasuteru Sakai, Atsushi Toyoda, Yohei Minakuchi, Keietsu Abe, Akira Yokota, Shuhei Yabe
- Journal Title
  
  International Journal of Systematic and Evolutionary Microbiology
  
  Volume: 69 Issue: 7 Pages: 1910-1918
- DOI
  10.1099/ijsem.0.003396
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K05406, KAKENHI-PROJECT-16H06279
[Journal Article] Formation of sporangiospores in Dictyobacter aurantiacus (class Ktedonobacteria in phylum Chloroflexi)2019
- Author(s)
  Shuhei Yabe, Chiung-mei Wang, Yu Zheng, Yasuteru Sakai, Keietsu Abe, Akira Yokota
- Journal Title
  
  The Journal of General and Applied Microbiology
  
  Volume: 65
- Data Source
  KAKENHI-PROJECT-18K05406
[Journal Article] Thermogemmatispora aurantia sp. nov. and Thermogemmatispora argillosa sp. nov., within the class Ktedonobacteria, and emended description of the genus Thermogemmatispora2019
- Author(s)
  Zheng Yu、Wang Chiung-Mei、Sakai Yasuteru、Abe Keietsu、Yokota Akira、Yabe Shuhei
- Journal Title
  
  International Journal of Systematic and Evolutionary Microbiology
  
  Volume: 69 Issue: 6 Pages: 1744-1750
- DOI
  10.1099/ijsem.0.003388
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K05406, KAKENHI-PROJECT-16H06279
[Journal Article] Comparative analysis of microbial diversity and bacterial seedling disease-suppressive activity in organic-farmed and standardized commercial conventional soils for rice nursery cultivation2018
- Author(s)
  Takahashi Hideki、Matsushita Yuko、Ito Toyoaki、Nakai Yutaka、Nanzyo Masami、Kobayashi Takashi、Iwaishi Shinji、Hashimoto Tomoyoshi、Miyashita Shuhei、Morikawa Toshiyuki、Yoshida Shigenobu、Tsushima Seiya、Ando Sugihiro
- Journal Title
  
  Journal of Phytopathology
  
  Volume: 166 Issue: 4 Pages: 249-264
- DOI
  10.1111/jph.12682
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K19257, KAKENHI-ORGANIZER-16H06429, KAKENHI-PROJECT-16H06185, KAKENHI-PROJECT-16KT0142, KAKENHI-PLANNED-16H06435
[Journal Article] Dictyobacter aurantiacus gen. nov., sp. nov., a member of the family Ktedonobacteraceae, isolated from soil, and emended description of the genus Thermosporothrix.2017
- Author(s)
  Yabe S., Y. Sakai, K. Abe, A. Yokota, A. Také, A. Matsumoto, A. Sugiharto4, D. Susilowati, M. Hamada, K. Nara, I.M. Sudiana, S. Otsuka
- Journal Title
  
  International Journal of Systematic and Evolutionary Microbiology
  
  Volume: 67 Issue: 8 Pages: 2615-2621
- DOI
  10.1099/ijsem.0.001985
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16KT0142, KAKENHI-PROJECT-16K20903
[Journal Article] Diversity of Ktedonobacteria with Actinomycetes-Like Morphology in Terrestrial Environments2017
- Author(s)
 Shuhei Yabe, Yasuteru Sakai, Keietsu Abe, Akira Yokota
- Journal Title
 
 Microbes and Environments
 
 Volume: 32 Issue: 1 Pages: 61-70
- DOI
 10.1264/jsme2.ME16144
- NAID
 130005519589
- ISSN
 1342-6311, 1347-4405
- Language
 English
- Peer Reviewed / Acknowledgement Compliant
- Data Source
 KAKENHI-PROJECT-16K20903
[Journal Article] Thermosporothrix narukonensis sp. nov., belonging to the class Ktedonobacteria, isolated from fallen leaves on geothermal soil, and emended description of the genus Thermosporothrix2016
- Author(s)
  Shuhei Yabe, Yasuteru Sakai, Akira Yokota
- Journal Title
  
  nternational Journal of Systematic and Evolutionary Microbiology
  
  Volume: in press Issue: 6 Pages: 2152-2157
- DOI
  10.1099/ijsem.0.001004
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-15H06035, KAKENHI-PROJECT-16K20903
[Presentation] 「天狗の麦飯」から分離されたクテドノバクテリア（Dictyobacter alpinus Uno16）からの抗菌化合物の探索2021
- Author(s)
  齋藤彩菜、白石太郎、葛山智久、新谷尚弘、工藤雄大、山下まり、阿部敬悦、横田明、矢部修平
- Organizer
  日本農芸化学会2021年度大会
- Data Source
  KAKENHI-PROJECT-18KK0424
[Presentation] 「天狗の麦飯」から分離されたクテドノバクテリア（Dictyobacter alpinus Uno16）からの抗菌化合物の探索2021
- Author(s)
  齋藤彩菜、白石太郎、葛山智久、新谷尚弘、工藤雄大、山下まり、阿部敬悦、横田明、矢部修平
- Organizer
  日本農芸化学会2021年度大会
- Data Source
  KAKENHI-PROJECT-18K05406
[Presentation] Novel natural products biosynthetic potential of the class Ktedonobacteria2019
- Author(s)
  Zheng, Y., Saito, A., Wang C. M., Toyoda, A., Minakuchi, Y., Sakai, Y., Abe, K., Yokota, A. and Yabe, S.
- Organizer
  The 8th FEMS Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K05406
[Presentation] クテドノバクテリアの魅力～複雑な形態分化とゲノムに潜在する多様な機能～2019
- Author(s)
  矢部修平
- Organizer
  日本農芸化学会東北支部７０周年シンポジウム
- Invited
- Data Source
  KAKENHI-PROJECT-18K05406
[Presentation] 「クテドノバクテリア（綱）」クテドノバクテリアDictyobacter aurantiacus S27株の形態分化とゲノム及び二次代謝の特徴2019
- Author(s)
  鄭宇、王瓊渼、齋藤彩菜、酒井康輝、阿部敬悦、横田明、矢部修平
- Organizer
  日本農芸化学会2019年度大会
- Data Source
  KAKENHI-PROJECT-18K05406
[Presentation] Isolation of Bacterial Strain From Compost with Biocontrol Ability Against Burkholderia glumae Inection in Rice2019
- Author(s)
  Ｍａｗａｒｉｄ　Ａｂｉｎｕｂｌｉ、鄭宇、酒井康輝、安藤杉尋、高橋秀樹、横田明、阿部敬悦、矢部修平
- Organizer
  日本農芸化学会2019
- Data Source
  KAKENHI-PROJECT-16KT0142
[Presentation] 「クテドノバクテリア（綱）」のゲノム解析が明かにした新規二次代謝産物生合成の潜在能力2018
- Author(s)
  鄭宇、豊田敦、水口洋平、王瓊渼、酒井康輝、阿部敬悦、横田明、矢部修平
- Organizer
  日本農芸化学会2018年度年次大会
- Data Source
  KAKENHI-PROJECT-16K20903
[Presentation] 「クテドノバクテリア（綱）」のゲノム解析が明かにした新規二次代謝産物生合成の潜在能力2018
- Author(s)
  鄭宇、豊田敦、水口洋平、王瓊渼、酒井康輝、阿部敬悦、横田明、矢部修平
- Organizer
  日本農芸化学会2018年度年次大会
- Data Source
  KAKENHI-PROJECT-16KT0142
[Presentation] Identification of Secondary Metabolites Gene Clusters in the Class Ktedonobacteria with Actinomycetes-Like-Morphology2018
- Author(s)
  Shuhei Yabe, Yu Zheng, Atsushi Toyoda, Yohei Minakuchi, Chang-Mei Wang, Yasuteru Sakai, Keietsu Abe, Akira Yokota
- Organizer
  ASM microbe 2018
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K05406
[Presentation] クロロフレクサス門に属する放線菌様細菌「クテドノバクテリア（綱）」のゲノムの特徴2018
- Author(s)
  鄭宇、王瓊渼、酒井康輝、阿部敬悦、横田明、矢部修平
- Organizer
  日本微生物生態学会32回大会
- Data Source
  KAKENHI-PROJECT-18K05406
[Presentation] 蔵王山の土壌と「天狗の麦飯」から新しいクテドノバクテリアの分離および系統分類2018
- Author(s)
  王瓊渼、鄭宇、酒井康輝、宮下　英明、阿部敬悦、横田明、矢部修平
- Organizer
  日本微生物生態学会32回大会
- Data Source
  KAKENHI-PROJECT-18K05406
[Presentation] 放線菌様の胞子嚢を形成するクテドノバクテリア綱に属する新しい系統「Dictyobacteraceae科」の特徴2018
- Author(s)
  矢部修平、鄭宇、王瓊渼、酒井康輝、阿部敬悦、横田明
- Organizer
  2018年度放線菌学会大会
- Data Source
  KAKENHI-PROJECT-18K05406
[Presentation] クテドノバクテリア綱の新しい系統に属する中温性細菌の分離と系統分類2017
- Author(s)
  ○矢部修平、酒井康輝、王瓊渼、鄭宇、浜田盛之、大塚重人、阿部敬悦、横田明
- Organizer
  ２０１６年度日本農芸化学会
- Place of Presentation
  京都女子大学（京都府京都市）
- Year and Date
  2017-03-19
- Data Source
  KAKENHI-PROJECT-16K20903
[Presentation] 好熱性クテドノバクテリア（Thermogemmatisporaceae科）の分離と系統分類2017
- Author(s)
  鄭宇、王瓊渼、酒井康輝、阿部敬悦、横田明、矢部修平
- Organizer
  2017年度　環境微生物系合同大会
- Data Source
  KAKENHI-PROJECT-16K20903
[Presentation] コンポストから分離された次世代放線菌「クテドノバクテリア」の魅力2017
- Author(s)
  矢部修平
- Organizer
  2017年度日本生物工学会北日本支部札幌シンポジウム「生物プロセスによるモノづくり・資源循環を目指して」
- Invited
- Data Source
  KAKENHI-PROJECT-16K20903
[Presentation] Ktedonobacterales目の新しい系統に属する中温性細菌の分類2017
- Author(s)
  王瓊渼、鄭宇、酒井康輝、阿部敬悦、横田明、矢部修平
- Organizer
  2017年度　環境微生物系合同大会　2017年8月29日
- Data Source
  KAKENHI-PROJECT-16KT0142
[Presentation] コンポストから分離された次世代放線菌「クテドノバクテリア」の魅力2017
- Author(s)
  矢部修平
- Organizer
  2017年度日本生物工学会北日本支部札幌シンポジウム「生物プロセスによるモノづくり・資源循環を目指して」
- Invited
- Data Source
  KAKENHI-PROJECT-16KT0142
[Presentation] Ktedonobacterales目の新しい系統に属する中温性細菌の分類2017
- Author(s)
  王瓊渼、鄭宇、酒井康輝、阿部敬悦、横田明、矢部修平
- Organizer
  2017年度　環境微生物系合同大会
- Data Source
  KAKENHI-PROJECT-16K20903
[Presentation] 投入原料の異なる各種コンポストの硫化水素除去能の違いと微生物叢解析2017
- Author(s)
  Abinubli Tariswafi Mawarid、酒井康輝、長谷川泰久、葉坂勝、佐藤剛一、佐藤真哉、横田明、阿部敬悦、矢部修平
- Organizer
  2017年度　環境微生物系合同大会
- Data Source
  KAKENHI-PROJECT-16KT0142
[Presentation] 好熱性クテドノバクテリア（Thermogemmatisporaceae科）の分離と系統分類2017
- Author(s)
  鄭宇、王瓊渼、酒井康輝、阿部敬悦、横田明、矢部修平
- Organizer
  2017年度　環境微生物系合同大会
- Data Source
  KAKENHI-PROJECT-16KT0142
[Presentation] 放線菌様の形態分化を示す魅力的な微生物資源「クテドノバクテリア」の開拓2016
- Author(s)
  矢部修平
- Organizer
  第59回日本放線菌学会学術講演会
- Place of Presentation
  東京電機大学東京千住キャンパス 100 周年ホール（東京都足立区）.
- Year and Date
  2016-03-07
- Invited
- Data Source
  KAKENHI-PROJECT-15H06035
[Presentation] 各種環境中の未開拓微生物資源クテドノバクテリア叢の解明2015
- Author(s)
  矢部修平, 酒井康輝, 七谷圭 , 横田明 , 五味勝也, 阿部敬悦
- Organizer
  日本生物工学会2015
- Place of Presentation
  城山観光ホテル (鹿児島県鹿児島市）
- Year and Date
  2015-10-28
- Data Source
  KAKENHI-PROJECT-15H06035

1. Abe Keietsu (50312624)

# of Collaborated Projects: 1 results

# of Collaborated Products: 6 results
2. 高橋英樹 (20197164)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
3. 塚谷祐介 (10421843)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 延優 (40805644)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 西原亜理沙 (80837774)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 二瓶直登 (50504065)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 大手信人 (10233199)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 大橋瑞江 (30453153)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 菅波眞央 (30897492)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 牧田直樹 (40723086)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. 小林奈通子 (60708345)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. ITOH Takehiko

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
13. 豊田敦

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
14. 甲斐正広

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
15. 宮下脩平

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Yabe Shuhei 矢部 修平

Research Projects

Research Products

Co-Researchers

新門Vulcanimicrobiota（WPS-2）の培養化によって解き明かされる新しい光合成様式Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Elucidating the significance of trans-root organic component absorption in agro-forest ecosystems.

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

南極洞窟に優占棲息する新奇生物資源クテドノバクテリア菌株の拡充と生理特性の解析Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Could "Ktedonobacteria" be a new group of useful bacteria comparable to actinomycetes?Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Improvement of biocontrol activity in industrial-scale composters and screening of microorganisms showing biocontrol activities from the composters

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Analyzing of microbiome of a poor understanding group 'Ktedonobacteria' with Actinomycetes-Like Morphology and exploration of new bioactive compounds from the group.Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

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放線菌に次ぐ新しい微生物資源「クテドノバクテリア」の開拓Principal Investigator

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[Journal Article] High cellulolytic potential of the Ktedonobacteria lineage revealed by genome-wide analysis of CAZymes2021

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[Journal Article] Genome Features and Secondary Metabolites Biosynthetic Potential of the Class Ktedonobacteria2019

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[Journal Article] Formation of sporangiospores in <i>Dictyobacter aurantiacus</i> (class <i>Ktedonobacteria</i> in phylum <i>Chloroflexi</i>)2019

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[Journal Article] Formation of sporangiospores in Dictyobacter aurantiacus (class Ktedonobacteria in phylum Chloroflexi)2019

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[Journal Article] Thermogemmatispora aurantia sp. nov. and Thermogemmatispora argillosa sp. nov., within the class Ktedonobacteria, and emended description of the genus Thermogemmatispora2019

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Yabe Shuhei 矢部修平