Yamagami Ryota 山上龍太

Researcher Number	70767227
Other IDs
Affiliation (Current)	2025: 愛媛大学, 理工学研究科(工学系), 講師
Affiliation (based on the past Project Information) *help	2025: 愛媛大学, 理工学研究科(工学系), 講師 2021 – 2024: 愛媛大学, 理工学研究科(工学系), 助教
Review Section/Research Field	Principal Investigator Basic Section 43010:Molecular biology-related / 0701:Biology at molecular to cellular levels, and related fields Except Principal Investigator Basic Section 43030:Functional biochemistry-related
Keywords	Principal Investigator RNAシーケンス / 変異プロファイリング / 次世代シーケンス / tRNA修飾 / tRNA / RNA / RNA修飾酵素 / RNAシュードウリジル化酵素 / 核酸関連タンパク質 / RNAメチル化酵素 / 変異プロファイリング法 / 網羅解析 / tRNA修飾酵素 … More Except Principal Investigator … More 核酸 / タンパク質 / 酵素 Less

tRNAシュードウリジン合成酵素の基質選択機構とシュードウリジン修飾の機能の解明Principal Investigator
- Principal Investigator
  
  山上龍太
- Project Period (FY)
  2025 – 2027
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 43010:Molecular biology-related
- Research Institution
  Ehime University
これまでにないドメイン構成やサブユニットをもつアーキアtRNA修飾酵素の研究
- Principal Investigator
  
  堀弘幸
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 43030:Functional biochemistry-related
- Research Institution
  Ehime University
tRNA修飾酵素の新規標的RNAを効率的に同定する技術開発とその応用Principal Investigator
- Principal Investigator
  
  山上龍太
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 43010:Molecular biology-related
- Research Institution
  Ehime University
Development of a new functional analysis using mutational profiling that reveals RNA-protein interactionPrincipal Investigator
- Principal Investigator
  
  Yamagami Ryota
- Project Period (FY)
  2021 – 2022
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Review Section
  
  0701:Biology at molecular to cellular levels, and related fields
- Research Institution
  Ehime University

All 2024 2023 2022

All Journal Article Presentation

[Journal Article] Rational design of oligonucleotides for enhanced in vitro transcription of small RNA2024
- Author(s)
  Teppei Matsuda, Hiroyuki Hori, Ryota Yamagami
- Journal Title
  
  RNA
  
  Volume: in press Pages: rna.079923.123-rna.079923.123
- DOI
  10.1261/rna.079923.123
- Data Source
  KAKENHI-PROJECT-22K15035
[Journal Article] Application of mutational profiling: New functional analyses reveal the tRNA recognition mechanism of tRNA m1A22 methyltransferase2023
- Author(s)
  Ryota Yamagami, Hiroyuki Hori
- Journal Title
  
  Journal of Biological Chemistry
  
  Volume: 299 Issue: 1 Pages: 102759-102776
- DOI
  10.1016/j.jbc.2022.102759
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K15035, KAKENHI-PROJECT-20H03211, KAKENHI-PROJECT-21K20638
[Journal Article] Functional analysis of tRNA modification enzymes using mutational profiling2023
- Author(s)
  Ryota Yamagami, Hiroyuki Hori
- Journal Title
  
  Methods in Enzymology
  
  Volume: - Pages: 69-101
- DOI
  10.1016/bs.mie.2023.02.021
- ISBN
  9780443239762
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22K15035, KAKENHI-PROJECT-20H03211, KAKENHI-PROJECT-21K20638
[Presentation] Rational design of oligonucleotides in template DNA construction for in vitro RNA transcription2023
- Author(s)
  Teppei Matsuda, Hiroyuki Hori, Ryota Yamagami
- Organizer
  24th Annual Meeting of the RNA Society of Japan
- Data Source
  KAKENHI-PROJECT-22K15035
[Presentation] ROCKET: a Python tool for enhanced in vitro transcription of short RNAs2023
- Author(s)
  Teppei Matsuda, Hiroyuki Hori, Ryota Yamagami
- Organizer
  The 50th International Symposium on Nucleic Acids Chemistry (ISNAC2023)
- Data Source
  KAKENHI-PROJECT-22K15035
[Presentation] Mutational Profiling Reveals The tRNA Recognition Mechanism of tRNA m1A Methyltransferase (TrmK)2022
- Author(s)
  Ryota Yamagami, Hiroyuki Hori
- Organizer
  第23回日本RNA学会年会
- Data Source
  KAKENHI-PROJECT-21K20638

1. 堀弘幸 (20256960)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

Yamagami Ryota 山上 龍太

Research Projects

Research Products

Co-Researchers

tRNAシュードウリジン合成酵素の基質選択機構とシュードウリジン修飾の機能の解明Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

これまでにないドメイン構成やサブユニットをもつアーキアtRNA修飾酵素の研究

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

tRNA修飾酵素の新規標的RNAを効率的に同定する技術開発とその応用Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Development of a new functional analysis using mutational profiling that reveals RNA-protein interactionPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Rational design of oligonucleotides for enhanced in vitro transcription of small RNA2024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Application of mutational profiling: New functional analyses reveal the tRNA recognition mechanism of tRNA m1A22 methyltransferase2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Functional analysis of tRNA modification enzymes using mutational profiling2023

Author(s)

Journal Title

DOI

ISBN

Data Source

[Presentation] Rational design of oligonucleotides in template DNA construction for in vitro RNA transcription2023

Author(s)

Organizer

Data Source

[Presentation] ROCKET: a Python tool for enhanced in vitro transcription of short RNAs2023

Author(s)

Organizer

Data Source

[Presentation] Mutational Profiling Reveals The tRNA Recognition Mechanism of tRNA m1A Methyltransferase (TrmK)2022

Author(s)

Organizer

Data Source

Yamagami Ryota 山上龍太