SHIMIZU Tokuro 清水徳朗

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SHIMIZU Tokurou 清水徳朗

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Researcher Number	90355404
Other IDs
Affiliation (Current)	2025: 国立研究開発法人農業・食品産業技術総合研究機構, 果樹茶業研究部門, 再雇用職員
Affiliation (based on the past Project Information) *help	2016 – 2022: 国立研究開発法人農業・食品産業技術総合研究機構, 果樹茶業研究部門, 上級研究員 2015: 国立研究開発法人農業・食品産業技術総合研究機構, その他部局等, その他 2015: 国立研究開発法人農業・食品産業技術総合研究機構, その他部局等, 上席研究員 2015: 国立研究開発法人農業・食品産業技術総合研究機構, 果樹茶業研究部門カンキツ研究領域, 上級研究員 2015: (独)農研機構, 果樹研究所, 上席研究員 … More 2014: 独立行政法人農業・食品産業技術総合研究機構, 果樹研究所カンキツ研究領域, 上席研究員 2014: 独立行政法人農業・食品産業技術総合研究機構, 果樹研究所, 室長等 2012 – 2014: 独立行政法人農業・食品産業技術総合研究機構, その他部局等, その他 2013: 独立行政法人農業・食品産業技術総合研究機構, その他部局等, 上席研究員 2013: 独立行政法人農業・食品産業技術総合研究機構, 果樹研究所カンキツ研究領域, 上席研究員 2012: 独立行政法人農業・食品産業技術総合研究機構, カンキツ研究領域興津, 上席研究員 2012: 独立行政法人農業・食品産業技術総合研究機構, 果樹研究所カンキツ研究領域, 上席研究員 2011: (独)農業・食品産業技術総合研究機構, 果樹研究所, 上席研究員 2010: 独立行政法人農業食品産業技術総合研究機構果樹研究所, 上席研究員 Less
Review Section/Research Field	Principal Investigator Basic Section 39030:Horticultural science-related / Horticulture/Landscape architecture Except Principal Investigator Horticulture/Landscape architecture / Horticultural science / Basic Section 39030:Horticultural science-related
Keywords	Principal Investigator DNAマーカー / バイオインフォマティクス / カンキツ / 果樹 / 品種分化 / 遺伝 / 親子関係 / 遺伝的多様性 / 遺伝子型 / 遺伝資源 … More / 栽培化 / ゲノム解析 / DNAマーカー分析 / ゲノム / 多型 / 系譜 / 育種 / カラタチ / 塩基配列多型 / ゲノム配列 / INDEL / SNP / 多型検出 / ゲノム解読 / 枝変わり / 突然変異 / ウンシュウミカン … More Except Principal Investigator カンキツ / 果樹 / 園芸学 / 博物学 / アーカイブ / 博物館 / 在来カンキツ / 分類 / 伝播 / 起源 / 類縁関係 / 古文書解析 / DNA解析 / 社会学 / 東洋史 / 分類学 / 親子関係 / 育種 / マーカー / 無核性 / ＢＡＣ－ＦＩＳＨ / ＦＩＳＨ / ニホンナシ / 不和合 / 遺伝子 / 不和合性 / リンゴ / バラ科 / BAC-FISH / FISH / ゲノム / 核型分析 / 染色体 / ナシ / 葉緑体DNA解析 / SSR解析 / ＤＮＡ / 種分化 / 遺伝子発現 / 離脱 / 果実 / マイクロアレイ / 果実離脱 / 生理落果 / 単為結果 Less

Rebuilding of origin and classification system in citrus - Analysis of Tanaka Tyozaburo's citrus dried leaf specimens and his research notes -l
- Principal Investigator
  
  KITAJIMA AKIRA
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 39030:Horticultural science-related
- Research Institution
  Kyoto University of Advanced Science
Analysis of genealogy and genome admixture of indigenous citrus varieties by statistical genetics analysisPrincipal Investigator
- Principal Investigator
  
  SHIMIZU TOKUROU
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 39030:Horticultural science-related
- Research Institution
  National Agriculture and Food Research Organization
Study of citrus taxonomy and origin and diffusion of citrus species - Analysis of Tanak's citrus specimens and cultural and sociological investigation -
- Principal Investigator
  
  Kitajima Akira
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Horticultural science
- Research Institution
  Kyoto University
Gene mapping of suppression factor of seedless expression and DNA marker development of the gene in pummelo
- Principal Investigator
  
  KITAJIMA AKIRA
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Horticultural science
- Research Institution
  Kyoto University
Investigation of sea road in citrus
- Principal Investigator
  
  Kitajima Akira
- Project Period (FY)
  2012 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Horticulture/Landscape architecture
- Research Institution
  Kyoto University
Application of chromosome analysis on genome studies in fruit trees
- Principal Investigator
  
  YAMAMOTO Masashi
- Project Period (FY)
  2012 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Horticulture/Landscape architecture
- Research Institution
  Kagoshima University
Molecular biological analysis of natural mutation occurrence on citrus mutant linesPrincipal Investigator
- Principal Investigator
  
  SHIMIZU Tokurou
- Project Period (FY)
  2012 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Horticulture/Landscape architecture
- Research Institution
  National Agriculture and Food Research Organization
Study on molecular mechanisms of fruit abscission and evaluation of parthenocarpy in citrus
- Principal Investigator
  
  KITAJIMA Akira
- Project Period (FY)
  2010 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Horticulture/Landscape architecture
- Research Institution
  Kyoto University

All 2022 2021 2020 2019 2018 2016 2014 2013 2012 Other

All Journal Article Presentation

[Journal Article] General Utilities for Genotyping Study (GUGS): A Comprehensive Application in Genotype and Sequence Data Manipulation2021
- Author(s)
  Shimizu, T
- Journal Title
  
  JARQ: Japan Agricultural Research Quarterly
  
  Volume: 55(2)
- NAID
  130008112930
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K05634
[Journal Article] Markers, Maps, and Marker-Assisted Selection2020
- Author(s)
  Shimizu Tokurou、Aka Kacar Y?ld?z、Cristofani-Yaly Mari?ngela、Curtolo Maiara、Machado Marcos Antonio
- Journal Title
  
  The Citrus Genome (Gentile A, La Malfa S and Deng Z eds.)
  
  Volume: 7 Pages: 107-139
- DOI
  10.1007/978-3-030-15308-3_7
- ISBN
  9783030107994, 9783030153083
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K05634
[Journal Article] 静岡県沼津市戸田の自生タチバナ群落の多様性解析とその維持機構の推定2020
- Author(s)
  清水徳朗、長倉建治、奥田薫樹、稲木博文、奥田勇、遠藤重由
- Journal Title
  
  園芸学研究
  
  Volume: 19 Pages: 141-149
- NAID
  130007866838
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K05634
[Journal Article] Determining the parental combinations of the triploid acid citrus cultivars ‘Yellow Bell’ and ‘Tahiti lime’ using DNA marker analyses2019
- Author(s)
  Nakano Michiharu, Shimizu Tokurou(CA), Sugawa Shun,Kaneyoshi Junko, Kita Masasyuki, Yoshioka Terutaka, Kitajima Akira
- Journal Title
  
  Scientia Horticulturae
  
  Volume: 246 Pages: 893-897
- DOI
  10.1016/j.scienta.2018.11.071
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K05634
[Journal Article] A model for the domestication and diversification processes of modern citrus cultivars in Japan2019
- Author(s)
  Shimizu T.、Kitajima A.、Nonaka K.、Yoshioka T.、Ohta S.、Goto S.、Kaminuma E.、Nakamura Y.
- Journal Title
  
  Acta Horticulturae
  
  Volume: 1230 Issue: 1230 Pages: 7-14
- DOI
  10.17660/actahortic.2019.1230.2
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K05634, KAKENHI-PROJECT-18K05635
[Journal Article] Citrus genomics2012
- Author(s)
  F. G. Gmitter Jr., C. Chen, M. A. Machado, A. A. de Souza, P. Ollitrault, Y. Froehlicher, T. Shimizu
- Journal Title
  
  Tree Genetics & Genomes
  
  Volume: 8 Issue: 3 Pages: 611-626
- DOI
  10.1007/s11295-012-0499-2
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24580061
[Journal Article] カンキツゲノムCGHアレイを利用した温州ミカンの不安定な変異系統とその原系統間での多型性の評価2012
- Author(s)
  清水徳朗,矢野加奈子,古藤田信博,藤井浩,遠藤朋子,吉岡照高,喜多正幸,寺岡毅
- Journal Title
  
  DNA多型
  
  Volume: 20 Pages: 71-75
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24580061
[Journal Article] カンキツにおける二次生理落果の果実離脱に関与する遺伝子の発現解析2012
- Author(s)
  北島宣・伊勢賢太郎・清水徳朗・羽生剛・李曦・山崎安津・中崎鉄也
- Journal Title
  
  園学研
  
  Volume: 11(別 1) Pages: 247-247
- Data Source
  KAKENHI-PROJECT-22380025
[Journal Article] カンキツにおける二次生理落果の果実離脱に関与する遺伝子の発現解析2012
- Author(s)
  北島宣・清水徳朗・羽生剛・李曦, ら7名
- Journal Title
  
  園芸学研究
  
  Volume: 11(別1) Pages: 247-247
- Data Source
  KAKENHI-PROJECT-22380025
[Journal Article] Genomics approaches for the molecular analysis of citrus mutants2012
- Author(s)
  T. Shimizu
- Journal Title
  
  Gamma Field Symposia
  
  Volume: 49 Pages: 57-69
- Data Source
  KAKENHI-PROJECT-24580061
[Presentation] ゲノムから見たカンキツ品種の系譜と田中長三郎の分類体系の再考察2022
- Author(s)
  清水徳朗・北島宣
- Organizer
  園芸学会
- Data Source
  KAKENHI-PROJECT-20H02980
[Presentation] カンキツの多様性の解明および田中長三郎資料の発掘と分類体系の評価―田中長三郎のカンキツ分類とアジア地域の在来カンキツの多様性―2022
- Author(s)
  北島宣・山本雅史・清水徳朗・伊藤謙・中村彰宏・山﨑安津・中野道治
- Organizer
  園芸学会
- Data Source
  KAKENHI-PROJECT-20H02980
[Presentation] 静岡県沼津市戸田の自生タチバナ群落の多様性解析とその維持機構の推定2020
- Author(s)
  清水徳朗、長倉建治、奥田薫樹、稲木博文、奥田勇、遠藤重由
- Organizer
  園芸学会2020年春季大会
- Data Source
  KAKENHI-PROJECT-18K05634
[Presentation] 在来カンキツ品種の来歴と系譜から推定した日本における多様性拡大と栽培化のモデル2018
- Author(s)
  清水徳朗・北島宣・野中圭介・吉岡照高・太田智・後藤新悟・神沼英理・中村保一
- Organizer
  園芸学会平成30年度秋季大会
- Data Source
  KAKENHI-PROJECT-18K05634
[Presentation] 高精度DNAマーカー分析による在来カンキツ品種の類縁関係の推定2016
- Author(s)
  清水徳朗・北島　宣他6名
- Organizer
  園芸学会
- Place of Presentation
  東京農業大学厚木キャンパス
- Year and Date
  2016-03-26
- Data Source
  KAKENHI-PROJECT-24405025
[Presentation] カンキツ分類研究の新たな展開と田中分類の今日的理解2016
- Author(s)
  清水　徳朗
- Organizer
  国際シンポジウム　世界的柑橘分類学者田中長三郎の足跡と系譜柑橘の起源と分類
- Place of Presentation
  京都府木津川市　京都大学農学研究科附属農場
- Year and Date
  2016-10-09
- Data Source
  KAKENHI-PROJECT-16H05781
[Presentation] ゲノムワイドSSRマーカー分析によるカラタチおよび関連系統の類縁関係の推定2014
- Author(s)
  清水徳朗、吉岡照高、喜多正幸、太田智
- Organizer
  園芸学会
- Place of Presentation
  筑波大学
- Data Source
  KAKENHI-PROJECT-24580061
[Presentation] Genome sequence of Satsuma mandarin and comparison to other citrus genome2014
- Author(s)
  T. Shimizu, Y. Tanizawa, T. Mochizuki, H. Nagasaki, E. Kaminuma, T. Yoshioka, A. Toyoda, A. Fujiyama, Y. Nakamura
- Organizer
  Plant and Animal Genome XXII
- Place of Presentation
  San Diego, CA, USA
- Data Source
  KAKENHI-PROJECT-24580061
[Presentation] ウンシュウミカンの全塩基配列解読とカンキツのゲノム育種基盤構築への利用2014
- Author(s)
  清水徳朗
- Organizer
  園芸学会
- Place of Presentation
  筑波大学
- Invited
- Data Source
  KAKENHI-PROJECT-24580061
[Presentation] Whole genome sequencing and DNA marker development in Citrus2013
- Author(s)
  T. Shimizu
- Organizer
  第一回韓国果樹ゲノム国際シンポジウム
- Place of Presentation
  水原市、韓国
- Invited
- Data Source
  KAKENHI-PROJECT-24580061
[Presentation] Molecular identification of varieties2012
- Author(s)
  T. Shimizu
- Organizer
  国際柑橘学会第12回大会
- Place of Presentation
  スペイン・バレンシア市
- Data Source
  KAKENHI-PROJECT-24580061
[Presentation] Origin of dwarf, thornless-type trifoliate orange varieties deduced from genome-wide genotyping analysis2012
- Author(s)
  T. Shimizu, T. Yoshioka, M. Kita, S. Ohta
- Organizer
  国際柑橘学会第12回大会
- Place of Presentation
  スペイン・バレンシア市
- Data Source
  KAKENHI-PROJECT-24580061
[Presentation] 核SSR及び葉緑体DNA配列によるレモンおよび香酸カンキツ類の多様性解析2012
- Author(s)
  中野道治・清水徳郎・須川瞬・金好純子・喜多正幸・吉岡照高・北
- Organizer
  園芸学会
- Place of Presentation
  福井県立大学(福井県)
- Year and Date
  2012-09-23
- Data Source
  KAKENHI-PROJECT-24405025
[Presentation] Whole genome sequencing and mapping analysis for identifying polymorphism among 11 citrus varieties2012
- Author(s)
  T. Shimizu, H. Nagasaki, E. Kaminuma, A. Toyoda, A. Fujiyama, Y. Namakura
- Organizer
  国際柑橘学会第12回大会
- Place of Presentation
  スペイン・バレンシア市
- Data Source
  KAKENHI-PROJECT-24580061
[Presentation] Verifying the mandarin breeding: lessons from parentage analysis of citrus varieties
- Author(s)
  清水徳朗、他
- Organizer
  Plant and Animal Genome XXIII
- Place of Presentation
  アメリカ、CA、サンディエゴ市
- Year and Date
  2015-01-10 – 2015-01-14
- Data Source
  KAKENHI-PROJECT-24580061

1. KITAJIMA Akira (70135549)

# of Collaborated Projects: 5 results

# of Collaborated Products: 5 results
2. YAMAMOTO Masashi (00305161)

# of Collaborated Projects: 4 results

# of Collaborated Products: 1 results
3. YAMASAKI Atsu (70582584)

# of Collaborated Projects: 3 results

# of Collaborated Products: 0 results
4. 中野道治 (40705159)

# of Collaborated Projects: 3 results

# of Collaborated Products: 1 results
5. YONEMORI Keizo (10111949)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
6. 中崎鉄也 (60217693)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
7. 伊藤謙 (00619281)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
8. 深尾葉子 (20193815)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
9. 中村彰宏 (20264814)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
10. HABU Tsuyoshi (60335304)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
11. 小枝壮太 (00629066)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 桂圭佑 (20432338)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 八幡昌紀 (60420353)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. 高田教臣 (50355369)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. 山本俊哉 (60355360)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. 安冨歩 (20239768)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. 田中圭子 (20435051)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
18. 西村和紗 (60835453)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
19. 福田智子 (50363388)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
20. KANEYOSHI Junko

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
21. YANAGIMOTO Yuko

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
22. Yue Xiu-Ping

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
23. Lin Wei-Zhen

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
24. Zhong Guo-Fang

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
25. Osada Toshiki

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
26. Watanabe Kazuo

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
27. Kawase Makoto

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
28. Yamashita Machiko

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
29. Maeyama Kazunori

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

SHIMIZU Tokuro 清水 徳朗

SHIMIZU Tokurou 清水 徳朗

Research Projects

Research Products

Co-Researchers

Rebuilding of origin and classification system in citrus - Analysis of Tanaka Tyozaburo's citrus dried leaf specimens and his research notes -l

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Analysis of genealogy and genome admixture of indigenous citrus varieties by statistical genetics analysisPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Study of citrus taxonomy and origin and diffusion of citrus species - Analysis of Tanak's citrus specimens and cultural and sociological investigation -

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Gene mapping of suppression factor of seedless expression and DNA marker development of the gene in pummelo

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Investigation of sea road in citrus

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Application of chromosome analysis on genome studies in fruit trees

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Molecular biological analysis of natural mutation occurrence on citrus mutant linesPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Study on molecular mechanisms of fruit abscission and evaluation of parthenocarpy in citrus

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] General Utilities for Genotyping Study (GUGS): A Comprehensive Application in Genotype and Sequence Data Manipulation2021

Author(s)

Journal Title

NAID

Data Source

[Journal Article] Markers, Maps, and Marker-Assisted Selection2020

Author(s)

Journal Title

DOI

ISBN

Data Source

[Journal Article] 静岡県沼津市戸田の自生タチバナ群落の多様性解析とその維持機構の推定2020

Author(s)

Journal Title

NAID

Data Source

[Journal Article] Determining the parental combinations of the triploid acid citrus cultivars ‘Yellow Bell’ and ‘Tahiti lime’ using DNA marker analyses2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] A model for the domestication and diversification processes of modern citrus cultivars in Japan2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Citrus genomics2012

SHIMIZU Tokuro 清水徳朗

SHIMIZU Tokurou 清水徳朗

[Presentation] カンキツの多様性の解明および田中長三郎資料の発掘と分類体系の評価―田中長三郎のカンキツ分類とアジア地域の在来カンキツの多様性―2022

[Presentation] ウンシュウミカンの全塩基配列解読とカンキツのゲノム育種基盤構築への利用2014