Maruyama Hugo 円山由郷

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MARUYAMA Hugo 円山由郷

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Researcher Number	90610296
Other IDs	https://orcid.org/0000-0002-2190-7109
Affiliation (Current)	2025: 大阪歯科大学, 歯学部, 助教
Affiliation (based on the past Project Information) *help	2014 – 2023: 大阪歯科大学, 歯学部, 助教
Review Section/Research Field	Principal Investigator Applied microbiology / Basic Section 57080:Social dentistry-related Except Principal Investigator Basic Section 57020:Oral pathobiological science-related
Keywords	Principal Investigator 染色体 / 染色体タンパク質 / アーキア / 音波 / マイクロバイオーム / 口腔微生物叢 / ナノポアシーケンサー / 口腔細菌叢 / 古細菌 / 環境応答 … More / ヒストン / 遺伝子水平伝播 / TrmBL2 / Alba / histone / 染色体高次構造 / 遺伝子発現 … More Except Principal Investigator 膜小胞 / 免疫細胞 / 細菌叢 / 口腔細菌 / プロポリス / マクロファージ / プラーク / 炎症 Less

プレバイオティクスを見据えた細菌叢と免疫細胞の偏移に関わる物質探索
- Principal Investigator
  
  沖永敏則
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 57020:Oral pathobiological science-related
- Research Institution
  Osaka Dental University
Development of a safe method to control the oral microbiota that varies among individualsPrincipal Investigator
- Principal Investigator
  
  円山由郷
- Project Period (FY)
  2021 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 57080:Social dentistry-related
- Research Institution
  Osaka Dental University
Responses to the environment via changes in higher-order chromosome structures in ArchaeaPrincipal Investigator
- Principal Investigator
  
  Maruyama Hugo
- Project Period (FY)
  2017 – 2021
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Applied microbiology
- Research Institution
  Osaka Dental University
Novel insights into proteins controlling chromosome structure and gene expression in ArchaeaPrincipal Investigator
- Principal Investigator
  
  MARUYAMA Hugo
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Applied microbiology
- Research Institution
  Osaka Dental University

All 2024 2023 2022 2021 2020 2019 2018 2017 2016 2015 Other

All Journal Article Presentation Book Patent

[Book] Micrococcal Nuclease Digestion Assays for the Analysis of Chromosome Structure in Archaea. In: Peeters, E., Bervoets, I. (eds) Prokaryotic Gene Regulation.2022
- Author(s)
  Hugo Maruyama
- Total Pages
  10
- Publisher
  Humana, New York
- Data Source
  KAKENHI-PROJECT-21K10245
[Book] Functions of archaeal nucleoid proteins: Archaeal silencers are still missing. In: Nishida H, Oshima T, editors. DNA Traffic in the Environment.2019
- Author(s)
  Maruyama H, Kent NA, Nishida H, Oshima T.
- Total Pages
  278
- Publisher
  Springer Singapore
- ISBN
  9789811334108
- Data Source
  KAKENHI-PROJECT-17K15254
[Book] Atomic force microscopy imaging and analysis of prokaryotic genome organization. In: Dame RT, editor. Bacterial Chromatin: Methods and Protocols.2018
- Author(s)
  Ohniwa RL, Maruyama H, Morikawa K, Takeyasu K. New York
- Total Pages
  419
- Publisher
  Springer New York
- ISBN
  9781493986750
- Data Source
  KAKENHI-PROJECT-17K15254
[Journal Article] Development of oral flora analysis methods useful for perioperative oral care2024
- Author(s)
  Hidekazu FUSHIZUKA, Hugo MARUYAMA , Takayuki NAMBU, Chiho MASHIMO, Takuya UCHIDA, Toshinori OKINAGA, Yoshihiro MOMOTA
- Journal Title
  
  Journal of Osaka Dental University
  
  Volume: 58 Issue: 1 Pages: 295-303
- DOI
  10.18905/jodu.58.1_295
- ISSN
  0475-2058, 2189-6488
- Year and Date
  2024-04-25
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K10245
[Journal Article] Longitudinal analysis of chronic periodontitis bacterial flora by next‐generation sequencing2024
- Author(s)
  Shotaro MORI, Hugo MARUYAMA , Yoichiro TAGUCHI, Hitoshi AZUMA, Chizuko OGATA, Toshinori OKINAGA, Makoto UMEDA
- Journal Title
  
  Journal of Osaka Dental University
  
  Volume: 58 Issue: 1 Pages: 289-294
- DOI
  10.18905/jodu.58.1_289
- ISSN
  0475-2058, 2189-6488
- Year and Date
  2024-04-25
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K10245
[Journal Article] Effect of Brazilian propolis from the state of Bahia on oral bacteria2023
- Author(s)
  Hiroki Takigawa, Chiho Mashimo, Takayuki Nambu, Hugo Maruyama, Tochinori Okinaga
- Journal Title
  
  Journal of Osaka Dental University
  
  Volume: 57 Issue: 1 Pages: 125-129
- DOI
  10.18905/jodu.57.1_125
- ISSN
  0475-2058, 2189-6488
- Year and Date
  2023-04-25
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K10245
[Journal Article] Effect of Brazilian propolis from the state of Bahia on oral bacteria2023
- Author(s)
  Takigawa H, Mashimo C, Nambu T, Maruyama H, Okinaga T.
- Journal Title
  
  J Osaka Dent Univ.
  
  Volume: 57 Pages: 125-129
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K09954
[Journal Article] Effect of cell death induced by deferriferrichrysin on oral squamous cell carcinoma cells.2023
- Author(s)
  Tani M, Okinaga T, Mambu T, Mashimo C, Maruyama H, Iseki T.
- Journal Title
  
  J Osaka Dent Univ.
  
  Volume: 57 Pages: 89-97
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K09954
[Journal Article] Complete Genome Sequence of Actinomyces oris Strain K20, Isolated from an Oral Apical Lesion2022
- Author(s)
  Nambu Takayuki、Mashimo Chiho、Maruyama Hugo、Taniguchi Makoto、Huang Yao、Takigawa Hiroki、Kang Wenyan、Yan Qianqian、Zhang Lei、Yang Lin、Takahashi Kazuya、Okinaga Toshinori
- Journal Title
  
  Microbiology Resource Announcements
  
  Volume: 11 Issue: 8
- DOI
  10.1128/mra.00541-22
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K10285, KAKENHI-PROJECT-21K10245, KAKENHI-PROJECT-22K09954
[Journal Article] Antimicrobial property of Hawaiian propolis against oral pathogenic bacteria2022
- Author(s)
  Kang W, Maruyama H, Kawano A, Okinaga T
- Journal Title
  
  Journal of Osaka Dental University
  
  Volume: 56 Pages: 161-165
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22K09954
[Journal Article] Species-specific growth inhibitory effect of propolis2021
- Author(s)
  Daisuke NAMIKAWA, Hugo MARUYAMA, Ayako MASAGO, Chiho MASHIMO, Takayuki NAMBU, Toshinori OKINAGA, Kazuya TAKAHASHI
- Journal Title
  
  Journal of Osaka Dental University
  
  Volume: 55 Issue: 1 Pages: 83-89
- DOI
  10.18905/jodu.55.1_83
- NAID
  130008067752
- ISSN
  0475-2058, 2189-6488
- Year and Date
  2021-04-25
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K10245
[Journal Article] Single-Molecule/Cell Analyses Reveal Principles of Genome-Folding Mechanisms in the Three Domains of Life2021
- Author(s)
  Maruyama Hugo、Nambu Takayuki、Mashimo Chiho、Okinaga Toshinori、Takeyasu Kunio
- Journal Title
  
  International Journal of Molecular Sciences
  
  Volume: 22 Issue: 24 Pages: 13432-13432
- DOI
  10.3390/ijms222413432
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K15254
[Journal Article] Different Proteins Mediate Step-Wise Chromosome Architectures in Thermoplasma acidophilum and Pyrobaculum calidifontis2020
- Author(s)
  Maruyama Hugo、Prieto Eloise I.、Nambu Takayuki、Mashimo Chiho、Kashiwagi Kosuke、Okinaga Toshinori、Atomi Haruyuki、Takeyasu Kunio
- Journal Title
  
  Frontiers in Microbiology
  
  Volume: 11
- DOI
  10.3389/fmicb.2020.01247
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K15254
[Journal Article] Different Proteins Mediate Step-wise Chromosome Architectures in Thermoplasma acidophilum and Pyrobaculum calidifontis2020
- Author(s)
  Maruyama Hugo、Prieto Eloise I.、Nambu Takayuki、Mashimo Chiho、Kashiwagi Kosuke、Okinaga Toshinori、Atomi Haruyuki、Takeyasu Kunio
- Journal Title
  
  bioRxiv
  
  Volume: －
- DOI
  10.1101/2020.03.13.982959
- Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K15254
[Journal Article] Nitric oxide donor modulates a multispecies oral bacterial community - an in vitro study.2019
- Author(s)
  Takayuki Nambu, Dan Wang, Chiho Mashimo, Hugo Maruyama, Kosuke Kashiwagi, Kazushi Yoshikawa, Kazuyo Yamamoto, Toshinori Okinaga.
- Journal Title
  
  Microorganisms
  
  Volume: 7 Issue: 9 Pages: 353-353
- DOI
  10.3390/microorganisms7090353
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K10456, KAKENHI-PROJECT-17K15254, KAKENHI-PROJECT-16K11469, KAKENHI-PROJECT-16K11876
[Journal Article] Compliance with infection control practices when taking dental x-rays: Survey of a Japanese dental school2018
- Author(s)
  Gamoh Shoko、Akiyama Hironori、Maruyama Hugo、Ohshita Naohiro、Nakayama Masayuki、Matsumoto Kazuhiro、Yoshida Hiroaki、Ohkubo Tadashi、Kishimoto Naotaka、Mori Yui、Nakatsuka Michiko、Shimizutani Kimishige
- Journal Title
  
  Clinical and Experimental Dental Research
  
  Volume: 4 Issue: 5 Pages: 158-166
- DOI
  10.1002/cre2.124
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K15254
[Journal Article] Complete Genome Sequence of Rothia aeria Type Strain JCM 11412, Isolated from Air in the Russian Space Laboratory Mir.2016
- Author(s)
  Nambu T, Tsuzukibashi O, Uchibori S, Yamane K, Yamanaka T, Maruyama H, Wang PL, Mugita N, Morioka H, Takahashi K, Komasa Y, Mashimo C.
- Journal Title
  
  Genome Announcements
  
  Volume: 4 Issue: 6
- DOI
  10.1128/genomea.01444-16
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26462858, KAKENHI-PROJECT-26850057, KAKENHI-PROJECT-26861552, KAKENHI-PROJECT-16K11469, KAKENHI-PROJECT-16K11876
[Journal Article] Genome Sequence of Actinomyces naeslundii Strain ATCC 27039, Isolated from an Abdominal Wound Abscess.2016
- Author(s)
  Mashimo C, Yamane K, Yamanaka T, Maruyama H, Wang PL, Komasa S, Okazaki J, Nambu T.
- Journal Title
  
  Genome Announc
  
  Volume: 4(6) Issue: 6
- DOI
  10.1128/genomea.01443-16
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26850057, KAKENHI-PROJECT-26861552, KAKENHI-PROJECT-16K11469, KAKENHI-PROJECT-16K11876
[Journal Article] Complete Genome Sequence of Prevotella intermedia Strain 17-22015
- Author(s)
  Nambu T, Yamane K, Maruyama H, Mashimo C, Yamanaka T.
- Journal Title
  
  Genome Announc
  
  Volume: 3 Issue: 4
- DOI
  10.1128/genomea.00951-15
- Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26850057, KAKENHI-PROJECT-26861552, KAKENHI-PROJECT-24592790
[Journal Article] Transcriptional Repressor TrmBL2 from Thermococcus kodakarensis Forms Filamentous Nucleoprotein Structures and Competes with Histones for DNA Binding in a Salt- and DNA Supercoiling-dependent Manner2015
- Author(s)
  Efremov AK, Qu Y, Maruyama H, Lim CJ, Takeyasu K, Yan J.
- Journal Title
  
  J Biol Chem
  
  Volume: 290 Issue: 25 Pages: 15770-84
- DOI
  10.1074/jbc.m114.626705
- Peer Reviewed / Acknowledgement Compliant / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26850057, KAKENHI-PLANNED-24115003
[Patent] 口腔用組成物2019
- Inventor(s)
  松村康史、榎本靖、沖永敏則、南部隆之、真下千穂、円山由郷
- Industrial Property Rights Holder
  松村康史、榎本靖、沖永敏則、南部隆之、真下千穂、円山由郷
- Industrial Property Rights Type
  特許
- Industrial Property Number
  2019-051147
- Filing Date
  2019
- Data Source
  KAKENHI-PROJECT-17K15254
[Presentation] F. nucleatum が誘導する上皮間葉転換に対するレスベラトロールの影響2023
- Author(s)
  Jie Min，沖永敏則，真下千穂，南部隆之，円山由郷
- Organizer
  第96回日本細菌学会総会
- Data Source
  KAKENHI-PROJECT-22K09954
[Presentation] ハワイ州産プロポリスの口腔細菌へ与える影響について2022
- Author(s)
  康文岩、円山由郷、川野亜希、沖永敏則
- Organizer
  第573回大阪歯科学会例会
- Data Source
  KAKENHI-PROJECT-22K09954
[Presentation] アーキアの染色体タンパク質と遺伝子水平伝播2019
- Author(s)
  円山由郷
- Organizer
  2019年度　国立遺伝学研究所研究会「環境中のDNA循環」
- Invited
- Data Source
  KAKENHI-PROJECT-17K15254
[Presentation] アーキアにおける水平伝播遺伝子の発現抑制機構に関するモデル2019
- Author(s)
  円山由郷、大島拓、南部隆之、真下千穂、沖永敏則
- Organizer
  第42回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-17K15254
[Presentation] ゲノム解析から明らかとなった口腔細菌叢バランスに関わる因子2018
- Author(s)
  円山由郷, 南部隆之, 真下千穂, 沖永敏則, 川添堯彬.
- Organizer
  第8回臨床ゲノム医療学会
- Data Source
  KAKENHI-PROJECT-17K15254
[Presentation] 口腔でショ糖非依存性にバイオフィルムを形成するActinomyces orisのゲノム解析.2018
- Author(s)
  山根　一芳, 南部　隆之, 真下　千穂, 円山　由郷, 山中　武志
- Organizer
  第12回ゲノム微生物学会年会
- Data Source
  KAKENHI-PROJECT-17K15254
[Presentation] アーキアにおける染色体構築機構の種間比較2018
- Author(s)
  円山由郷, 南部隆之, 真下千穂, 沖永敏則.
- Organizer
  第60回歯科基礎医学会
- Data Source
  KAKENHI-PROJECT-17K15254
[Presentation] The roles of TrmBL2 protein on chromosome architecture and protection in Thermococcus kodakarensis.2017
- Author(s)
  Maruyama H, Nambu T, Mashimo C, Atomi H, Takeyasu K
- Organizer
  Gordon Research Conferences. Archaeae; Ecology, Metabolism and Molecular Biology
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K15254
[Presentation] The Roles of TrmBL2 protein on Chromosome Architecture and Protection in Thermococcus kodakarensis2016
- Author(s)
  Hugo Maruyama, Takashi Kushida, Hiroki Higashibata, Artem K. Efremov, Jie Yan, Haruyuki Atomi, Kunio Takeyasu
- Organizer
  11th International Congress on Extremophiles
- Place of Presentation
  Kyoto University Clock Tower Centennial Hall (Kyoto, Japan)
- Year and Date
  2016-08-12
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26850057
[Presentation] The role of Histone and TrmB-like protein in chromosome organization of Thermococcus kodakarensis2015
- Author(s)
  Maruyama H, Efremov AK, Qu Y, Lim CJ, Takeyasu K, Yan J.
- Organizer
  Gordon Research Conference. Archaea; Ecology, Metabolism & Molecular Biology
- Place of Presentation
  Newry, Maine, USA
- Year and Date
  2015-07-26
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26850057
[Presentation] The role of Histone and TrmB-like proteins in chromosome organization of Thermococcus kodakarensis
- Author(s)
  Hugo Maruyama, Kunio Takeyasu, Haruyuki Atomi, Hisanori Fukushima, Nicholas A. Kent
- Organizer
  10th International Congress on Extremophiles
- Place of Presentation
  Saint Petersburg, Russia
- Year and Date
  2014-09-07 – 2014-09-11
- Data Source
  KAKENHI-PROJECT-26850057

1. 大島拓 (50346318)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
2. 粂田昌宏 (00582181)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. 沖永敏則 (60582773)

# of Collaborated Projects: 1 results

# of Collaborated Products: 6 results
4. 高橋一也 (10236268)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
5. 西保亜希 (30880653)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 南部隆之 (80367903)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
7. 真下千穂 (80368159)

# of Collaborated Projects: 1 results

# of Collaborated Products: 5 results
8. ATOMI Haruyuki

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
9. HIGASHIBATA Hiroki

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
10. YAN Jie

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
11. 川野亜希

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
12. 續橋治

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Maruyama Hugo 円山 由郷

MARUYAMA Hugo 円山 由郷

Research Projects

Research Products

Co-Researchers

プレバイオティクスを見据えた細菌叢と免疫細胞の偏移に関わる物質探索

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Development of a safe method to control the oral microbiota that varies among individualsPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Responses to the environment via changes in higher-order chromosome structures in ArchaeaPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Novel insights into proteins controlling chromosome structure and gene expression in ArchaeaPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Book] Micrococcal Nuclease Digestion Assays for the Analysis of Chromosome Structure in Archaea. In: Peeters, E., Bervoets, I. (eds) Prokaryotic Gene Regulation.2022

Author(s)

Total Pages

Publisher

Data Source

[Book] Functions of archaeal nucleoid proteins: Archaeal silencers are still missing. In: Nishida H, Oshima T, editors. DNA Traffic in the Environment.2019

Author(s)

Total Pages

Publisher

ISBN

Data Source

[Book] Atomic force microscopy imaging and analysis of prokaryotic genome organization. In: Dame RT, editor. Bacterial Chromatin: Methods and Protocols.2018

Author(s)

Total Pages

Publisher

ISBN

Data Source

[Journal Article] Development of oral flora analysis methods useful for perioperative oral care2024

Author(s)

Journal Title

DOI

ISSN

Year and Date

Language

Data Source

[Journal Article] Longitudinal analysis of chronic periodontitis bacterial flora by next‐generation sequencing2024

Author(s)

Journal Title

DOI

ISSN

Year and Date

Language

Data Source

[Journal Article] Effect of Brazilian propolis from the state of Bahia on oral bacteria2023

Author(s)

Journal Title

DOI

ISSN

Year and Date

Language

Data Source

[Journal Article] Effect of Brazilian propolis from the state of Bahia on oral bacteria2023

Author(s)

Journal Title

Data Source

[Journal Article] Effect of cell death induced by deferriferrichrysin on oral squamous cell carcinoma cells.2023

Author(s)

Journal Title

Data Source

[Journal Article] Complete Genome Sequence of Actinomyces oris Strain K20, Isolated from an Oral Apical Lesion2022

Author(s)

Maruyama Hugo 円山由郷

MARUYAMA Hugo 円山由郷

[Presentation] F. nucleatum が誘導する上皮間葉転換に対するレスベラトロールの影響2023