Nakamura Tomonori 中村友紀

Researcher Number	90648429
Other IDs	https://orcid.org/0000-0002-0173-0780
Affiliation (Current)	2025: 京都大学, 白眉センター, 特定准教授
Affiliation (based on the past Project Information) *help	2024 – 2025: 京都大学, 白眉センター, 特定准教授 2020 – 2022: 京都大学, 白眉センター, 特定准教授 2018 – 2020: 京都大学, 医学研究科, 特定助教
Review Section/Research Field	Principal Investigator Transformative Research Areas, Section (III) / Basic Section 44020:Developmental biology-related Except Principal Investigator Sections That Are Subject to Joint Review: Basic Section01010:Philosophy and ethics-related , Basic Section01080:Sociology of science, history of science and technology-related / Basic Section 01010:Philosophy and ethics-related / Basic Section 01080:Sociology of science, history of science and technology-related
Keywords	Principal Investigator 霊長類 / カニクイザル / 多能性幹細胞 / 次元の呪い / scRNA-seq / 発生学 / エピコード / 分化偏向性 / 高次元空間ノイズ / 着床後胚発生 / オンライン講演会 / コミュニティ基盤 / PDB seminar … More Except Principal Investigator … More ELSI/RRI / 生命倫理学 / ヒト発生研究 Less

Decoding the Epicode and Regulatory Networks Underlying Primate-Specific PluripotencyPrincipal Investigator
- Principal Investigator
  
  中村友紀
- Project Period (FY)
  2025 – 2026
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Kyoto University
Establishing an Ethical Foundation for Human Developmental Research in Modern Society
- Principal Investigator
  
  澤井努
- Project Period (FY)
  2024 – 2027
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 01080:Sociology of science, history of science and technology-related
  Basic Section 01010:Philosophy and ethics-related
  Sections That Are Subject to Joint Review: Basic Section01010:Philosophy and ethics-related , Basic Section01080:Sociology of science, history of science and technology-related
- Research Institution
  Hiroshima University
A new foundation for primate developmental biologyArea Organizer
- Area Organizer
  
  中村友紀
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (B)
Establishment of a community platform for primate developmental biolgoyPrincipal Investigator
- Principal Investigator
  
  Nakamura Tomonori
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (B)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Kyoto University
Analysis of early post-implantation development and establishment of physiological ex vivo culture method in primatePrincipal Investigator
- Principal Investigator
  
  Nakamura Tomonori
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (B)
- Review Section
  
  Transformative Research Areas, Section (III)
- Research Institution
  Kyoto University
Establishment of new human pluripotent stem cell with unbiased differentiation potency.Principal Investigator
- Principal Investigator
  
  Nakamura Tomonori
- Project Period (FY)
  2018 – 2020
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 44020:Developmental biology-related
- Research Institution
  Kyoto University

All 2023 2022 2021 2020 2019 2018

All Journal Article Presentation Patent

[Journal Article] Induction of fetal meiotic oocytes from embryonic stem cells in cynomolgus monkeys2023
- Author(s)
  Gyobu‐Motani Sayuri、Yabuta Yukihiro、Mizuta Ken、Katou Yoshitaka、Okamoto Ikuhiro、Kawasaki Masanori、Kitamura Ayaka、Tsukiyama Tomoyuki、Iwatani Chizuru、Tsuchiya Hideaki、Tsujimura Taro、Yamamoto Takuya、Nakamura Tomonori、Saitou Mitinori
- Journal Title
  
  The EMBO Journal
  
  Volume: - Issue: 9
- DOI
  10.15252/embj.2022112962
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K19246, KAKENHI-PROJECT-22K15380, KAKENHI-ORGANIZER-20H05760, KAKENHI-PLANNED-20H05763, KAKENHI-PROJECT-23K23794, KAKENHI-PROJECT-23K23804, KAKENHI-PROJECT-21K20740, KAKENHI-PROJECT-17H06098
[Journal Article] Mesothelial fusion mediates chorioallantoic membrane formation2022
- Author(s)
  Nagai Hiroki、Tanoue Yuki、Nakamura Tomonori、Chan Christopher J. J.、Yamada Shigehito、Saitou Mitinori、Fukuda Takaichi、Sheng Guojun
- Journal Title
  
  Philosophical Transactions of the Royal Society B: Biological Sciences
  
  Volume: 377 Issue: 1865 Pages: 20210263-20210263
- DOI
  10.1098/rstb.2021.0263
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-ORGANIZER-20H05760, KAKENHI-PROJECT-21H02490
[Journal Article] <i>Ex vivo</i> reconstitution of fetal oocyte development in humans and cynomolgus monkeys2022
- Author(s)
  Mizuta Ken、Katou Yoshitaka、Nakakita Baku、Kishine Aoi、Nosaka Yoshiaki、Saito Saki、Iwatani Chizuru、Tsuchiya Hideaki、Kawamoto Ikuo、Nakaya Masataka、Tsukiyama Tomoyuki、Nagano Masahiro、Kojima Yoji、Nakamura Tomonori、Yabuta Yukihiro、Horie Akihito、Mandai Masaki、Ohta Hiroshi、Saitou Mitinori
- Journal Title
  
  The EMBO Journal
  
  Volume: 41 Issue: 18
- DOI
  10.15252/embj.2022110815
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22K06066, KAKENHI-PROJECT-22K19246, KAKENHI-ORGANIZER-20H05760, KAKENHI-PLANNED-20H05763, KAKENHI-PROJECT-19H03618, KAKENHI-PROJECT-20K21500, KAKENHI-PROJECT-19K16023, KAKENHI-PROJECT-23K23794, KAKENHI-PROJECT-21K20740
[Journal Article] Circadian protection against bacterial skin infection by epidermal CXCL14-mediated innate immunity2022
- Author(s)
  Tsujihana Kojiro、Tanegashima Kosuke、Santo Yasuko、Yamada Hiroyuki、Akazawa Sota、Nakao Ryuta、Tominaga Keiko、Saito Risa、Nishito Yasumasa、Hata Ryu-Ichiro、Nakamura Tomonori、Murai Iori、Kono Yuka、Sugawa Maho、Tanioka Miki、Egawa Gyohei、Doi Masao、Isa Tadashi、Kabashima Kenji、Hara Takahiko、Okamura Hitoshi
- Journal Title
  
  Proceedings of the National Academy of Sciences
  
  Volume: 119 Issue: 25 Pages: 25-25
- DOI
  10.1073/pnas.2116027119
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K07208, KAKENHI-PROJECT-22K18384, KAKENHI-PROJECT-20K20864, KAKENHI-ORGANIZER-20H05760, KAKENHI-ORGANIZER-20H05782, KAKENHI-PLANNED-20H05783, KAKENHI-PROJECT-22H04987, KAKENHI-PROJECT-20K08702, KAKENHI-PROJECT-20K21426, KAKENHI-PROJECT-18H04015, KAKENHI-PROJECT-20H05697, KAKENHI-PROJECT-22H04992, KAKENHI-PROJECT-22H00441
[Journal Article] Resolution of the curse of dimensionality in single-cell RNA sequencing data analysis2022
- Author(s)
  Yusuke Imoto, Tomonori Nakamura, Emerson G Escolar, Michio Yoshiwaki, Yoji Kojima, Yukihiro Yabuta, Yoshitaka Katou, Takuya Yamamoto, Yasuaki Hiraoka, Mitinori Saitou
- Journal Title
  
  Life Science Alliance
  
  Volume: 5 Issue: 12 Pages: 202201591-202201591
- DOI
  10.26508/lsa.202201591
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-ORGANIZER-22H05104, KAKENHI-ORGANIZER-20H05760, KAKENHI-PLANNED-22H05107
[Journal Article] Non-human primates as a model for human development2021
- Author(s)
  Tomonori Nakamura, Kohei Fujiwara, Mitinori Saitou, Tomonyuki Tsukiyama
- Journal Title
  
  Stem Cell Reports
  
  Volume: 1 Pages: 10-10
- NAID
  120007037861
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-ORGANIZER-20H05760
[Journal Article] GATA transcription factors, SOX17 and TFAP2C, drive the human germ-cell specification program2021
- Author(s)
  Kojima Yoji、Yamashiro Chika、Murase Yusuke、Yabuta Yukihiro、Okamoto Ikuhiro、Iwatani Chizuru、Tsuchiya Hideaki、Nakaya Masataka、Tsukiyama Tomoyuki、Nakamura Tomonori、Yamamoto Takuya、Saitou Mitinori
- Journal Title
  
  Life Science Alliance
  
  Volume: 4 Issue: 5 Pages: 202000974-202000974
- DOI
  10.26508/lsa.202000974
- NAID
  120006979739
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K21370, KAKENHI-PROJECT-19K16023, KAKENHI-ORGANIZER-20H05760, KAKENHI-PLANNED-20H05763, KAKENHI-PROJECT-18K06030, KAKENHI-PROJECT-17H06098, KAKENHI-PLANNED-20H05761, KAKENHI-PROJECT-18K14714, KAKENHI-PROJECT-20K06654
[Journal Article] Capturing human trophoblast development with naive pluripotent stem cells in vitro2021
- Author(s)
  S Io M Kabata Y Lemura N Morone A Minagawa B Wong I Okamoto T Nakamura Y Kojima C Iwatani H Tsuchiya B Kawswandy E KondohS Kaneko K Woltjen M Saitou T Yamanoto M Mandai Y Takashima
- Journal Title
  
  Cell Stem Cell
  
  Volume: 21 Issue: 6 Pages: 10-10
- DOI
  10.1016/j.stem.2021.03.013
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K16688, KAKENHI-ORGANIZER-20H05760, KAKENHI-PROJECT-18K06030, KAKENHI-PROJECT-16H02465, KAKENHI-PLANNED-20H05762, KAKENHI-PROJECT-21K19189, KAKENHI-PROJECT-21K20987, KAKENHI-PROJECT-19J13503, KAKENHI-PLANNED-20H05761, KAKENHI-PROJECT-18K14714
[Journal Article] Induction of the germ cell fate from pluripotent stem cells in cynomolgus monkeys.2020
- Author(s)
  Sakai Y, Nakamura T, Okamoto I, Gyobu-Motani S, Ohta H, Yabuta Y, Tsukiyama T, Iwatani C, Tsuchiya H, Ema M, Morizane A, Takahashi J, Yamamoto T, Saitou M.
- Journal Title
  
  Biol Reprod
  
  Volume: 102(3) Issue: 3 Pages: 620-638
- DOI
  10.1093/biolre/ioz205
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06030, KAKENHI-PROJECT-19K16013, KAKENHI-PROJECT-19H03618, KAKENHI-PROJECT-17K08135, KAKENHI-PROJECT-18K14714, KAKENHI-PROJECT-17H06098
[Journal Article] Cyclosporin A and FGF signaling support the proliferation/survival of mouse primordial germ cell-like cells in vitro†2020
- Author(s)
  Ohta Hiroshi、Yabuta Yukihiro、Kurimoto Kazuki、Nakamura Tomonori、Murase Yusuke、Yamamoto Takuya、Saitou Mitinori
- Journal Title
  
  Biology of Reproduction
  
  Volume: 104 Issue: 2 Pages: 344-360
- DOI
  10.1093/biolre/ioaa195
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K21500, KAKENHI-PLANNED-18H05553, KAKENHI-PROJECT-20H00471, KAKENHI-PROJECT-19H03618, KAKENHI-PROJECT-18K19295, KAKENHI-PROJECT-17H06098, KAKENHI-PLANNED-20H05761, KAKENHI-PROJECT-18K14714
[Journal Article] Long‐term expansion with germline potential of human primordial germ cell‐like cells in?vitro2020
- Author(s)
  Murase Yusuke、Yabuta Yukihiro、Ohta Hiroshi、Yamashiro Chika、Nakamura Tomonori、Yamamoto Takuya、Saitou Mitinori
- Journal Title
  
  The EMBO Journal
  
  Volume: 39 Issue: 21 Pages: 104929-104929
- DOI
  10.15252/embj.2020104929
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K21500, KAKENHI-PROJECT-19H03618, KAKENHI-PROJECT-17H06098, KAKENHI-PLANNED-20H05761, KAKENHI-PROJECT-18K14714
[Journal Article] ZGLP1 is a determinant for the oogenic fate in mice2020
- Author(s)
  Nagaoka So I.、Nakaki Fumio、Miyauchi Hidetaka、Nosaka Yoshiaki、Ohta Hiroshi、Yabuta Yukihiro、Kurimoto Kazuki、Hayashi Katsuhiko、Nakamura Tomonori、Yamamoto Takuya、Saitou Mitinori
- Journal Title
  
  Science
  
  Volume: 367 Issue: 6482 Pages: 4115-4115
- DOI
  10.1126/science.aaw4115
- NAID
  120006850276
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K19295, KAKENHI-PLANNED-18H05553, KAKENHI-PROJECT-19H03618, KAKENHI-PROJECT-20K15801, KAKENHI-PROJECT-17H06098, KAKENHI-PLANNED-20H05761, KAKENHI-PROJECT-18K14714
[Journal Article] Generation of human oogonia from induced pluripotent stem cells in vitro.2018
- Author(s)
  30.Yamashiro C, Sasaki K, Yabuta Y, Kojima Y, Nakamura T, Okamoto I, Yokobayashi S, Murase Y, Ishikura Y, Shirane K, Sasaki H, Yamamoto T, Saitou M.
- Journal Title
  
  Science
  
  Volume: 362(6412) Issue: 6412 Pages: 356-360
- DOI
  10.1126/science.aat1674
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K06030, KAKENHI-PROJECT-18H05214, KAKENHI-PROJECT-18H02613, KAKENHI-PROJECT-17H06802, KAKENHI-PROJECT-17H06098, KAKENHI-PROJECT-18K14714
[Patent] 観測ノイズ削減法の開発2020
- Inventor(s)
  井元祐介、中村友紀、平岡裕章、斎藤通紀
- Industrial Property Rights Holder
  井元祐介、中村友紀、平岡裕章、斎藤通紀
- Industrial Property Rights Type
  特許
- Filing Date
  2020
- Data Source
  KAKENHI-PLANNED-20H05761
[Patent] 観測ノイズ削減法の開発2020
- Inventor(s)
  井元祐介、中村友紀、平岡裕章、斎藤通紀
- Industrial Property Rights Holder
  井元祐介、中村友紀、平岡裕章、斎藤通紀
- Industrial Property Rights Type
  特許
- Filing Date
  2020
- Acquisition Date
  2022
- Data Source
  KAKENHI-ORGANIZER-20H05760
[Patent] 観測ノイズ削減法の開発2020
- Inventor(s)
  井元祐介、中村友紀、平岡、斎藤通紀
- Industrial Property Rights Holder
  井元祐介、中村友紀、平岡、斎藤通紀
- Industrial Property Rights Type
  特許
- Filing Date
  2020
- Data Source
  KAKENHI-PROJECT-18K14714
[Presentation] A comprehensive high-resolution transcriptomic profiling of primate embryogenesis just after implantation2023
- Author(s)
  Tomonori Nakamura
- Organizer
  第21回　武田科学振興財団生命科学シンポジウム
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-ORGANIZER-20H05760
[Presentation] カニクイザルを用いた霊長類着床直後の胚発生研究2022
- Author(s)
  中村友紀
- Organizer
  第７６回日本人類学会、第３８回日本霊長類学会、連合大会
- Invited
- Data Source
  KAKENHI-ORGANIZER-20H05760
[Presentation] “次元の呪い”からの解放　~ シングルセル解析の真の力を解き放つ ~2022
- Author(s)
  中村友紀
- Organizer
  新学術領域研究「配偶子インテグリティ」オンラインセミナー
- Invited
- Data Source
  KAKENHI-ORGANIZER-20H05760
[Presentation] Dissecting the spectrum of pluripotency in primates2020
- Author(s)
  Tomonori Nakamura
- Organizer
  第５３回日本発生生物学会年会
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K14714
[Presentation] Identifying cells hidden by curse of dimensionality2020
- Author(s)
  Tomonori Nakamura
- Organizer
  1st ASHBi SignAC Workshop
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-ORGANIZER-20H05760
[Presentation] 霊長類特異的多能性状態の解明2020
- Author(s)
  Tomonori Nakamura* , Yusuke Imoto, Yasuaki Hiraoka, Mitinori Saitou
- Organizer
  第53回発生生物学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-18K14714
[Presentation] Identifying cells hidden by curse of dimensionality2020
- Author(s)
  Tomonori Nakamura
- Organizer
  The 1st ASHBi SignAC international workshop 2021
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-20H05761
[Presentation] 霊長類特異的多能性状態の解明2020
- Author(s)
  Tomonori Nakamura* , Yusuke Imoto, Yasuaki Hiraoka, Mitinori Saitou
- Organizer
  第53回発生生物学会年会
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PLANNED-20H05761
[Presentation] Identifying cells hidden by curse of dimensionality2020
- Author(s)
  Tomonori Nakamura
- Organizer
  The 1st ASHBi SignAC international workshop 2021
- Invited
- Data Source
  KAKENHI-PROJECT-18K14714
[Presentation] Induction of the Germ-Cell Fate from Pluripotent Stem Cells in Cynomolgus Monkeys2019
- Author(s)
  Tomonori Nakamura
- Organizer
  第４２回日本分子生物学会年会
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K14714
[Presentation] 次元の呪い~高次元観測データにおけるノイズとノイズ低減解析法~2019
- Author(s)
  中村友紀
- Organizer
  第６回六甲医学研究会
- Invited
- Data Source
  KAKENHI-PROJECT-18K14714

1. 岡本郁弘 (40648424)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
2. 澤井努 (50769817)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. 片岡雅知 (50979945)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 皆川朋皓 (90807223)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 石田柊 (30962013)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. TSUCHIYA Hideaki

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
7. TANEGASHIMA Kosuke

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
8. 築山智之

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
9. 中家雅隆

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
10. 大田浩

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
11. 南川淳隆

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
12. 栗本一基

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
13. 平岡裕章

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Nakamura Tomonori 中村 友紀

Research Projects

Research Products

Co-Researchers

Decoding the Epicode and Regulatory Networks Underlying Primate-Specific PluripotencyPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Establishing an Ethical Foundation for Human Developmental Research in Modern Society

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

A new foundation for primate developmental biologyArea Organizer

Area Organizer

Project Period (FY)

Research Category

Establishment of a community platform for primate developmental biolgoyPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Analysis of early post-implantation development and establishment of physiological ex vivo culture method in primatePrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Establishment of new human pluripotent stem cell with unbiased differentiation potency.Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Induction of fetal meiotic oocytes from embryonic stem cells in cynomolgus monkeys2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Mesothelial fusion mediates chorioallantoic membrane formation2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] <i>Ex vivo</i> reconstitution of fetal oocyte development in humans and cynomolgus monkeys2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Circadian protection against bacterial skin infection by epidermal CXCL14-mediated innate immunity2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Resolution of the curse of dimensionality in single-cell RNA sequencing data analysis2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Non-human primates as a model for human development2021

Author(s)

Journal Title

NAID

Data Source

[Journal Article] GATA transcription factors, SOX17 and TFAP2C, drive the human germ-cell specification program2021

Author(s)

Journal Title

DOI

NAID

Data Source

[Journal Article] Capturing human trophoblast development with naive pluripotent stem cells in vitro2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Induction of the germ cell fate from pluripotent stem cells in cynomolgus monkeys.2020

Nakamura Tomonori 中村友紀

[Presentation] “次元の呪い”からの解放　~ シングルセル解析の真の力を解き放つ ~2022