Tsujimura Taro 辻村太郎

Researcher Number	90741893
Other IDs
Affiliation (Current)	2025: 京都大学, 高等研究院, 特定准教授
Affiliation (based on the past Project Information) *help	2019 – 2024: 京都大学, 高等研究院, 特定講師 2016 – 2018: 慶應義塾大学, 医学部(信濃町), 特任助教 2016: 東京大学, 医学部附属病院, 特任助教 2015: 東京大学, 医学部附属病院, 助教
Review Section/Research Field	Principal Investigator Basic Section 43050:Genome biology-related / Kidney internal medicine / Genome biology Except Principal Investigator Basic Section 45060:Applied anthropology-related / Kidney internal medicine
Keywords	Principal Investigator ゲノム編集 / クロマチン高次構造 / エンハンサー / CTCF / マウス / ゲノム / 数理モデル / STITCH / 遺伝子発現 / 相互作用 … More / クロマチン / 遺伝子 / 腎機能 / シングルセルRNA-seq / Bmp7 / 腎臓 / BMP7 / 腎系統分化誘導 / 片アリル欠失ES細胞 … More Except Principal Investigator パレオゲノム / 全ゲノムimputation / 縄文人 / 環境適応 / 自然選択 / 集団遺伝学 / 狩猟採集民 / パレオゲノミクス / CRISPR / マイクロアレイ / DNAメチル化 / エピゲジェネティクス / ヒト腎臓由来iPS細胞 / 腎臓分化誘導因子 / 腎系統分化誘導法 / Epigenetic Memory / 腎臓細胞記憶 / 腎系統分化誘導遺伝子 / DNA マイクロアレイ解析 / DNAメチル化解析 / 腎臓由来iPS細胞 / 腎臓がん由来iPS細胞 / DNAの脱メチル化剤 / エピジェネティクス / リプログラミング / 癌幹細胞 / 新規腎系統分化誘導因子 / 腎上皮細胞由来iPS細胞 / iPS細胞 / Methylation / Epigenetic memory Less

Population genomics of Jomon: elucidating adaptive evolution in ancient hunters and gatherers and its legacy in modern populations
- Principal Investigator
  
  中込滋樹
- Project Period (FY)
  2022 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 45060:Applied anthropology-related
- Research Institution
  Kanazawa University
Understanding enhancer allocation by 3D genome "domains" through analysis of two parameters in the regulation.Principal Investigator
- Principal Investigator
  
  Tsujimura Taro
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 43050:Genome biology-related
- Research Institution
  Kyoto University
Functional analysis of enhancers to dissect differential roles of BMP7 secreted from distinct sites in kidney.Principal Investigator
- Principal Investigator
  
  Tsujimura Taro
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Kidney internal medicine
- Research Institution
  Kyoto University
  Keio University
Identification of novel renal lineage differentiative induction by genome wide methylation analysis of human kidney-derived iPS cells
- Principal Investigator
  
  TAKASE OSAMU
- Project Period (FY)
  2016 – 2018
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Kidney internal medicine
- Research Institution
  Keio University
  The University of Tokyo
Beyond allocating enhancers: Deciphering diverse roles of the ground-state chromatin conformation in gene regulation.Principal Investigator
- Principal Investigator
  
  Tsujimura Taro
- Project Period (FY)
  2015 – 2016
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Genome biology
- Research Institution
  The University of Tokyo

All 2022 2021 2020 2019 2018 2017 2016 2015

All Journal Article Presentation Patent

[Journal Article] Controlling gene activation by enhancers through a drug-inducible topological insulator2020
- Author(s)
  Taro Tsujimura, Osamu Takase, Masahiro Yoshikawa, Etsuko Sano, Matsuhiko Hayashi, Kazuto Hoshi, Tsuyoshi Takato, Atsushi Toyoda, Hideyuki Okano, Keiichi Hishikawa
- Journal Title
  
  eLife
  
  Volume: -
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K16072
[Journal Article] Controlling gene activation by enhancers through a drug-inducible topological insulator.2019
- Author(s)
  Tsujimura T, Takase O, Yoshikawa M, Sano E, Hayashi M, Hoshi K, Takato T, Toyoda A, Okano H, Hishikawa K
- Journal Title
  
  bioRxiv
  
  Volume: -
- DOI
  10.1101/534073
- Open Access
- Data Source
  KAKENHI-PROJECT-17K16072
[Journal Article] Control of Directionality of Chromatin Folding for the Inter- and Intra-Domain Contacts at the Tfap2c-Bmp7 Locus2018
- Author(s)
  Tsujimura T, Takase O, Yoshikawa M, Sano E, Hayashi M, Takato T, Toyoda A, Okano H, Hishikawa K.
- Journal Title
  
  Epigenetic & Chromatin
  
  Volume: 11 Issue: 1 Pages: 51-51
- DOI
  10.1186/s13072-018-0221-1
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K16072, KAKENHI-PROJECT-16H06279
[Journal Article] Roles and regulation of bone morphogenetic protein-7 in kidney development and diseases.2016
- Author(s)
  Tsujimura T, Idei M, Yoshikawa M, Takase O, Hishikawa K.
- Journal Title
  
  World J Stem Cells.
  
  Volume: 8 Issue: 9 Pages: 288-296
- DOI
  10.4252/wjsc.v8.i9.288
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15H03001, KAKENHI-PROJECT-26462400, KAKENHI-PROJECT-15K18454, KAKENHI-PROJECT-15K09244
[Journal Article] Spatially differentiated expression of quadruplicated green-sensitive RH2 opsin genes in zebrafish is determined by proximal regulatory regions and gene order to the locus control region2015
- Author(s)
  Taro Tsujimura, Ryoko Masud, Ryuichi Ashino, Shoji Kawamura
- Journal Title
  
  BMC Genetics
  
  Volume: 16 Issue: 1 Pages: 130-130
- DOI
  10.1186/s12863-015-0288-7
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-15K18454, KAKENHI-PROJECT-15H02421
[Patent] エンハンサーブロッカー及びその使用2019
- Inventor(s)
  辻村太郎、岡野栄之、菱川慶一
- Industrial Property Rights Holder
  慶應義塾大学
- Industrial Property Rights Type
  特許
- Filing Date
  2019
- Overseas
- Data Source
  KAKENHI-PROJECT-17K16072
[Patent] エンハンサーブロッカー及びその使用2018
- Inventor(s)
  辻村太郎、岡野栄之、菱川慶一
- Industrial Property Rights Holder
  慶應義塾大学
- Industrial Property Rights Type
  特許
- Filing Date
  2018
- Data Source
  KAKENHI-PROJECT-17K16072
[Presentation] 多層的な長距離エンハンサー制御：メカニズムの研究とその応用2022
- Author(s)
  辻村太郎
- Organizer
  第４回最先端循環代謝学の若手研究会
- Invited
- Data Source
  KAKENHI-PROJECT-20K06603
[Presentation] ロングリード解析を活用した長距離ゲノム調節機構の研究2022
- Author(s)
  辻村太郎
- Organizer
  NGS EXPO 2022
- Invited
- Data Source
  KAKENHI-PROJECT-20K06603
[Presentation] 遺伝子とエンハンサーの相互作用を理解する：新技術によるアプローチ2022
- Author(s)
  辻村太郎
- Organizer
  第45回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-20K06603
[Presentation] Regulation of gene activation by long-range enhancers2021
- Author(s)
  Taro Tsujimura
- Organizer
  1st ASHBi SignAC Workshop
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K06603
[Presentation] Modulating enhancer regulation: mechanisms and applications2021
- Author(s)
  辻村太郎
- Organizer
  RIKEN IMS Seminar: Mini workshop on Chromatin Regulation
- Invited
- Data Source
  KAKENHI-PROJECT-20K06603
[Presentation] クロマチン高次構造から考える遺伝子制御の制約と可塑性2018
- Author(s)
  辻村太郎
- Organizer
  第20回日本進化学会大会シンポジウム『表現型の可塑性～ホモ・サピエンスの環境適応のヒントを探る』
- Invited
- Data Source
  KAKENHI-PROJECT-17K16072
[Presentation] 腎癌細胞のリプログラミングへの取り組み2018
- Author(s)
  高瀬　敦、辻村　太郎、吉川　真弘、佐野　悦子、宮本　寛治、高戸　毅、岡野　栄之、菱川　慶一
- Organizer
  第17回日本再生医療学会総会
- Data Source
  KAKENHI-PROJECT-16K09602
[Presentation] クロマチン高次ドメイン構造分断機構の解明とiPS細胞におけるその応用2018
- Author(s)
  辻村太郎、高瀬敦、吉川真弘、佐野悦子、高戸毅、林松彦、豊田敦、岡野栄之、菱川慶一
- Organizer
  第17回日本再生医療学会総会
- Data Source
  KAKENHI-PROJECT-17K16072
[Presentation] 効率的ゲノム領域欠失・逆位導入によるクロマチン高次構造形成原理の解析2017
- Author(s)
  辻村太郎、高瀬敦、出射真奈、吉川真弘、南学正臣、高戸毅、菱川慶一
- Organizer
  第16回日本再生医療学会総会
- Place of Presentation
  仙台国際センター, 仙台
- Year and Date
  2017-03-07
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] Epigenetic Memory解析からのiPS細胞の新規腎系統分化誘導遺伝子の同定2017
- Author(s)
  高瀬敦、辻村太郎、吉川真弘、高戸毅、岡野栄之、菱川慶一
- Organizer
  2017年度　生命科学系学会合同年次大会
- Data Source
  KAKENHI-PROJECT-16K09602
[Presentation] 多種類iPS細胞におけるDNA methylation & Microarray複合解析によるEpigenetic Kidney Differentiation Geneの同定2017
- Author(s)
  高瀬敦、辻村太郎、高戸毅、南学正臣、菱川慶一
- Organizer
  第17回　日本抗加齢医学会学術総会
- Data Source
  KAKENHI-PROJECT-16K09602
[Presentation] Tfap2c-Bmp7遺伝子座で互いに反目方向に並ぶ２つのCTCF結合クラスターは、クロマチンの隣接コンタクトドメインを分断し、かつ内部コンタクトパターンに関与する、2017
- Author(s)
  辻村太郎、高瀬敦、吉川真弘、佐野悦子、高戸毅、豊田敦、岡野栄之、菱川慶一
- Organizer
  第４０回日本分子生物学会年会(ConBio2017)
- Data Source
  KAKENHI-PROJECT-17K16072
[Presentation] ヒト腎臓由来iPS細胞を利用したEpigenetic Memoryからの腎臓分化誘導遺伝子の同定2017
- Author(s)
  高瀬敦、辻村太郎、菱川慶一
- Organizer
  第60回　日本腎臓学会学術総会
- Data Source
  KAKENHI-PROJECT-16K09602
[Presentation] 多種類iPS細胞におけるKidney Epigenetic Memory解析からの新規腎系統分化誘導遺伝子の同定2017
- Author(s)
  高瀬敦, 辻村太郎, 吉川真弘, 高戸毅, 南学正臣, 菱川慶一
- Organizer
  第16回日本再生医療学会総会
- Place of Presentation
  仙台国際センター（宮城県仙台市）
- Year and Date
  2017-03-07
- Data Source
  KAKENHI-PROJECT-16K09602
[Presentation] 片アリル欠失ES細胞株を用いたBmp7の腎系統分化誘導特異的エンハンサー領域の効率的探索2016
- Author(s)
  辻村太郎、高瀬敦、出射真奈、南学正臣、高戸毅、菱川慶一
- Organizer
  第15回日本再生医療学会総会
- Place of Presentation
  大阪国際会議場
- Year and Date
  2016-03-17
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] 腎臓由来iPS細胞におけるEpigenetic MemoryのGenome-Wide Methylation解析の検討2016
- Author(s)
  高瀬敦, 辻村太郎, 南学正臣, 菱川慶一
- Organizer
  第59回日本腎臓学会学術総会
- Place of Presentation
  パシフィコ横浜（神奈川県横浜市）
- Year and Date
  2016-06-17
- Data Source
  KAKENHI-PROJECT-16K09602
[Presentation] マウスES細胞のゲノム編集による、Tfap2c-Bmp7遺伝子座の階層的ドメイン構造の解析2016
- Author(s)
  辻村太郎、高瀬敦、出射真奈、南学正臣、高戸毅、菱川慶一
- Organizer
  第10回日本エピジェネティクス研究会
- Place of Presentation
  第10回日本エピジェネティクス研究会
- Year and Date
  2016-05-19
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] Differential Usage of Enhancers for Bmp7 in Different Lineages of Kidney Development In Vitro2016
- Author(s)
  Taro Tsujimura, Osamu Takase, Masaomi Nangaku, Keiichi Hishikawa
- Organizer
  Annual Meeting of American Society of Nephrology KIDNEY WEEK
- Place of Presentation
  Chicago, IL, USA
- Year and Date
  2016-11-15
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] in vitroでのBmp7腎臓発生特異的エンハンサーの効率的探索2016
- Author(s)
  辻村太郎、高瀬敦、南学正臣、菱川慶一
- Organizer
  第59回日本腎臓学会学術総会
- Place of Presentation
  パシフィコ横浜、横浜
- Year and Date
  2016-06-17
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] 網羅的なゲノム欠失・逆位導入による、Tfap2c-Bmp7領域のクロマチン高次構造形成メカニズムの解析2016
- Author(s)
  辻村太郎、高瀬敦、出射真奈、吉川真弘、南学正臣、高戸毅、菱川慶一
- Organizer
  第39回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜、横浜
- Year and Date
  2016-11-30
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] クロマチン構造と遺伝子発現 - 疾患研究への応用を見据えて2016
- Author(s)
  辻村太郎
- Organizer
  第６０回再生医療カンファレンス
- Place of Presentation
  東京大学医学部附属病院
- Year and Date
  2016-04-21
- Invited
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] Functional dissection of enhancers for Bmp7 in kidney development2015
- Author(s)
  Taro Tsujimura, Osamu Takase, Mana Idei, Francois Spitz, Masaomi Nangaku, Takeshi Takato, Keiichi Hishikawa
- Organizer
  Annual Meeting of American Society of Nephrology KIDNEY WEEK
- Place of Presentation
  San Diego, CA, USA
- Year and Date
  2015-11-03
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] Linking the hierarchical structure of chromosome domains to functions in gene regulation2015
- Author(s)
  Taro Tsujimura
- Organizer
  THE 40th NAITO CONFERENCE ON “Epigenetics―From Histone Code to Therapeutic Strategy”
- Place of Presentation
  CHATERAISE Gateaux Kingdom SAPPORO
- Year and Date
  2015-09-15
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] マウスTfap2c-Bmp7遺伝子座における階層的ドメイン構造の機能解析2015
- Author(s)
  辻村太郎、高瀬敦、南学正臣、高戸毅、Francois Spitz, 菱川慶一
- Organizer
  第９回日本エピジェネティクス研究会
- Place of Presentation
  東京一ツ橋学術総合センター
- Year and Date
  2015-05-25
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] Generation of a "semi-haploid" ES cell line for comprehensive characterization of cis-regulatory regions in the Tfap2c-Bmp7 locus.2015
- Author(s)
  Taro Tsujimura, Osamu Takase, Mana Idei, Masaomi Nangaku, Takeshi Takato, Keiichi Hishikawa
- Organizer
  The 11th International Workshop on Advanced Genomics
- Place of Presentation
  Hitotsubashi Hall, Tokyo
- Year and Date
  2015-05-20
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] 腎臓発生におけるBmp7の特異的発現を制御するクロマチン高次構造2015
- Author(s)
  辻村太郎
- Organizer
  第45回日本腎臓学会東部学術大会「よくわかるシリーズ」
- Place of Presentation
  東京ミッドタウン
- Year and Date
  2015-10-02
- Invited
- Data Source
  KAKENHI-PROJECT-15K18454
[Presentation] 腎臓発生におけるBmp7発現のシス制御機構の解析2015
- Author(s)
  辻村太郎, 高瀬敦, 南学正臣, 菱川慶一
- Organizer
  第58回日本腎臓学会学術総会
- Place of Presentation
  名古屋国際会議場
- Year and Date
  2015-06-05
- Data Source
  KAKENHI-PROJECT-15K18454

1. TAKASE OSAMU (60265684)

# of Collaborated Projects: 1 results

# of Collaborated Products: 6 results
2. 菱川慶一 (50255460)

# of Collaborated Projects: 1 results

# of Collaborated Products: 7 results
3. 中込滋樹 (40625208)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 山本玲 (00581191)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 覚張隆史 (70749530)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

Tsujimura Taro 辻村 太郎

Research Projects

Research Products

Co-Researchers

Population genomics of Jomon: elucidating adaptive evolution in ancient hunters and gatherers and its legacy in modern populations

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Understanding enhancer allocation by 3D genome "domains" through analysis of two parameters in the regulation.Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Functional analysis of enhancers to dissect differential roles of BMP7 secreted from distinct sites in kidney.Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Identification of novel renal lineage differentiative induction by genome wide methylation analysis of human kidney-derived iPS cells

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Beyond allocating enhancers: Deciphering diverse roles of the ground-state chromatin conformation in gene regulation.Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] Controlling gene activation by enhancers through a drug-inducible topological insulator2020

Author(s)

Journal Title

Data Source

[Journal Article] Controlling gene activation by enhancers through a drug-inducible topological insulator.2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Control of Directionality of Chromatin Folding for the Inter- and Intra-Domain Contacts at the Tfap2c-Bmp7 Locus2018

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Roles and regulation of bone morphogenetic protein-7 in kidney development and diseases.2016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Spatially differentiated expression of quadruplicated green-sensitive RH2 opsin genes in zebrafish is determined by proximal regulatory regions and gene order to the locus control region2015

Author(s)

Journal Title

DOI

Data Source

[Patent] エンハンサーブロッカー及びその使用2019

Inventor(s)

Industrial Property Rights Holder

Industrial Property Rights Type

Filing Date

Data Source

[Patent] エンハンサーブロッカー及びその使用2018

Inventor(s)

Industrial Property Rights Holder

Industrial Property Rights Type

Filing Date

Data Source

[Presentation] 多層的な長距離エンハンサー制御：メカニズムの研究とその応用2022

Author(s)

Organizer

Data Source

[Presentation] ロングリード解析を活用した長距離ゲノム調節機構の研究2022

Author(s)

Organizer

Data Source

[Presentation] 遺伝子とエンハンサーの相互作用を理解する：新技術によるアプローチ2022

Author(s)

Tsujimura Taro 辻村太郎