Yamashita Eiki 山下栄樹

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YAMASHITA Eiki 山下栄樹

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Researcher Number	00294132
Other IDs	https://orcid.org/0000-0002-4278-0039
Affiliation (Current)	2024: 大阪大学, 蛋白質研究所, 准教授
Affiliation (based on the past Project Information) *help	2019 – 2024: 大阪大学, 蛋白質研究所, 准教授 2009 – 2015: 大阪大学, たんぱく質研究所, 助教 2007 – 2012: Osaka University, 蛋白質研究所, 助教 2008: 大阪大学, 蛋白質研究所, 助手 2007: 大阪大学, 蛋白質研究科, 助教 … More 2003 – 2006: 大阪大学, 蛋白質研究所, 助手 2002: 大阪大学, たんぱく質研究所, 助手 1998 – 2001: 大阪大学, 蛋白質研究所, 助手 1999: 大阪大学, たんぱく質研究所, 助手 Less
Review Section/Research Field	Principal Investigator Structural biochemistry / Basic Section 43020:Structural biochemistry-related / Biophysics / Medium-sized Section 47:Pharmaceutical sciences and related fields / Biological Sciences / Biological Sciences Except Principal Investigator Biological Sciences / Biophysics / Structural biochemistry / Biological Sciences
Keywords	Principal Investigator X線結晶構造解析 / 放射光 / チトクロム酸化酵素 / 構造生物学 / tRNA / 核外輸送因子 / 膜蛋白質複合体 / 立体構造解析 / トランスポーター / 立体構造 … More / 薬剤排出タンパク質複合体 / 薬剤排出タンパク質 / 相互作用解析 / 構造生物 / クライオ電子顕微鏡単粒子解析 / 膜蛋白質の物質輸送 / 外膜チャンネルの構造 / 膜タンパク質複合体の物質輸送 / 核-細胞質間物質輸送 / 繊結晶解析 / Ran / RNA / 核細胞質間輸送因子 / 構造細胞生物 / 核-細胞質間輸送 / 細胞構造生物 / 結晶構造解析 / 生体超分子複合体 / リン脂質 / 電子伝達 / 翻訳後修飾 … More Except Principal Investigator X線結晶構造解析 / 膜蛋白質 / 構造生物学 / タンパク質 / タンパク質複合体 / シンクロトロン放射光 / 多波長異常分散法 / 生体超分子複合体 / Self-replication mechanism of virus / Infection mechanism of virus / X-ray crystal structure analysis / Structure assembly of virus / Virus / Synchrotron Radiation / Biological macromolecular assemblies / ウイルスの自己複製機構 / ウイルスの感染機構 / ウイルスの構造構築 / ウイルス / Ubiquinone analogue / crystallization / membrane protein / Ubiquinol-cyt c reductase / 呼吸阻害剤 / 結晶化 / 膜たんぱく質 / チトクロムbc_1複合体 / シグナル伝達 / 複合体 / 電子顕微鏡 / NMR / X線結晶学 / 相互作用 / 生物物理学 / 分子生物学 / 細胞生物学 / 生化学 / 膜タンパク質 / 立体構造 / 輸送 / 超分子 / 蛋白質 / X線結晶解析 / ギャップ結合 / X 線結晶構造解析 / 機能 / 構造 / 生体超分子 / 反応中間体 / チトクロム酸化酵素 / 構造生物 / 放射光 Less

緑膿菌の多剤耐性化機構の解明に向けた薬剤排出タンパク質複合体の構造基盤Principal Investigator
- Principal Investigator
  
  山下栄樹
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 43020:Structural biochemistry-related
- Research Institution
  Osaka University
多剤排出タンパク質複合体の阻害剤開発に向けた基質との網羅的な構造活性相関解析Principal Investigator
- Principal Investigator
  
  山下栄樹
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Challenging Research (Exploratory)
- Review Section
  
  Medium-sized Section 47:Pharmaceutical sciences and related fields
- Research Institution
  Osaka University
Structure basis for multidrug resistance efflux pump spanning both membranes in Pseudomonas aeruginosaPrincipal Investigator
- Principal Investigator
  
  Yamashita Eiki
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 43020:Structural biochemistry-related
- Research Institution
  Osaka University
Structural basis for multidrug tripartite efflux pump through both the inner and outer membranes in Pseudomonas aeruginosa.Principal Investigator
- Principal Investigator
  
  Yamashita Eiki
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Structural biochemistry
- Research Institution
  Osaka University
Structural basis of cell-signaling complexes mediating signal perception, transduction and responses.
- Principal Investigator
  
  HAKOSHIMA Toshio
- Project Period (FY)
  2010 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Nara Institute of Science and Technology
Structural basis for nuclear transport mechanism by the nuclear transport receptor and improvement of a synchrotron beamline.Principal Investigator
- Principal Investigator
  
  YAMASHITA Eiki
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Osaka University
Elucidation of nuclear export machinery of tRNA by crystal structural analysis of exportin/tRNA complexPrincipal Investigator
- Principal Investigator
  
  YAMASHITA Eiki
- Project Period (FY)
  2010 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Structural biochemistry
- Research Institution
  Osaka University
X-ray crystallographic studies of intr- and inter-cellular transport
- Principal Investigator
  
  TSUKIHARA Tomitake
- Project Period (FY)
  2009 – 2013
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Structural biochemistry
- Research Institution
  University of Hyogo
Crystal structural analysis of connexin-26 gap junction channel to elucidate functional mechanism of gap junction
- Principal Investigator
  
  TSUKIHARA Tomitake
- Project Period (FY)
  2006 – 2008
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Structural biochemistry
- Research Institution
  University of Hyogo
  Osaka University
チトクロム酸化酵素結晶の高精度高分解能X線回折強度データ収集システムの開発Principal Investigator
- Principal Investigator
  
  山下栄樹
- Project Period (FY)
  2006 – 2007
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Structural biochemistry
- Research Institution
  Osaka University
High resolution X-ray crystal structural analysis of biological macromolecular assemblies
- Principal Investigator
  
  TSUKIHARA Tomitake
- Project Period (FY)
  2004 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Osaka University
原子レベルの立体構造に基づくチトクロム酸化酵素の動作機構の解明
- Principal Investigator
  
  ITO(SHINZWA) Kyouko (新澤恭子)
- Project Period (FY)
  2002 – 2003
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Himeji Institute of Technology
Complete Structural Determination of Rice dwarf virus
- Principal Investigator
  
  NAKAGAWA Atsushi
- Project Period (FY)
  2002 – 2005
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Biophysics
- Research Institution
  Osaka University
膜蛋白質複合体チトクロム酸化酵素分子内のリン脂質の構造と機能研究Principal Investigator
- Principal Investigator
  
  山下栄樹
- Project Period (FY)
  2001 – 2002
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  Biophysics
- Research Institution
  Osaka University
体外超分子複合体結晶のための低分解能の高精度X線回折強度データ測定法の開発Principal Investigator
- Principal Investigator
  
  山下栄樹
- Project Period (FY)
  2001 – 2002
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Osaka University
生体超分子複合体の構造解析への多波長異常分散法の利用
- Principal Investigator
  
  NAKAGAWA ATSUSHI
- Project Period (FY)
  1999 – 2002
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Osaka University
精密X線結晶構造解析によるチトクロム酸化酵素の翻訳後修飾構造の決定Principal Investigator
- Principal Investigator
  
  山下栄樹
- Project Period (FY)
  1998 – 1999
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  Biophysics
- Research Institution
  Osaka University
Structure Analysis of bovine heart cytochrome bc1 Complex at 2.3A resolution
- Principal Investigator
  
  ITO(SHINZWA) Kyouko
- Project Period (FY)
  1998 – 1999
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Biophysics
- Research Institution
  Institute of Technology

[Book] X線結晶構造解析のためのタンパク質調製法、タンパク質実験ノート(上)改訂第4 版2011
- Author(s)
  山下栄樹
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Critical roles of the CuB site in efficient proton pumping as revealed by crystal structures of mammalian cytochrome c oxidase catalytic intermediates2021
- Author(s)
  Atsuhiro Shimada, Fumiyoshi Hara, Kyoko Shinzawa-Itoh, Nobuko Kanehisa, Eiki Yamashita, Kazumasa Muramoto2, Tomitake Tsukihara, and Shinya Yoshikawa
- Journal Title
  
  Journal of Biological Chemistry
  
  Volume: 297 Issue: 3 Pages: 100967-100967
- DOI
  10.1016/j.jbc.2021.100967
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K06092, KAKENHI-PROJECT-19H03167
[Journal Article] Structure and function relationship of OqxB efflux pump from Klebsiella pneumoniae2021
- Author(s)
  Bharatham Nagakumar、Bhowmik Purnendu、Aoki Maho、Okada Ui、Sharma Sreevalli、Yamashita Eiki、Shanbhag Anirudh P.、Rajagopal Sreenath、Thomas Teby、Sarma Maitrayee、Narjari Riya、Nagaraj Savitha、Ramachandran Vasanthi、Katagihallimath Nainesh、Datta Santanu、Murakami Satoshi
- Journal Title
  
  Nature Communications
  
  Volume: 12 Issue: 1 Pages: 1-12
- DOI
  10.1038/s41467-021-25679-0
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K06079, KAKENHI-PROJECT-19H03167, KAKENHI-PROJECT-18K05396, KAKENHI-PROJECT-21H02412
[Journal Article] 緑膿菌由来の2つの膜を貫く巨大な排出ポンプMexAB-OprMの構造2020
- Author(s)
  堤研太、山下栄樹
- Journal Title
  
  Farumashia
  
  Volume: 56 Issue: 6 Pages: 504-508
- DOI
  10.14894/faruawpsj.56.6_504
- NAID
  130007850167
- ISSN
  0014-8601, 2189-7026
- Language
  Japanese
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19H03167
[Journal Article] X-ray structures of catalytic intermediates of cytochrome c oxidase provide insights into its O2 activation and unidirectional proton-pump mechanisms2020
- Author(s)
  A. Shimada, Y. Etoh, R. Kitoh-Fujisawa, A. Sasaki, K. Shinzawa-Itoh, T. Hiromoto, E. Yamashita, K. Muramoto, T. Tsukihara, S. Yoshikawa
- Journal Title
  
  J. Biol. Chem.
  
  Volume: 295 Issue: 17 Pages: 5818-5833
- DOI
  10.1074/jbc.ra119.009596
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K06092, KAKENHI-PROJECT-18K06162, KAKENHI-PROJECT-17H03646, KAKENHI-PROJECT-18K14635, KAKENHI-PROJECT-19H03167
[Journal Article] Observation of unexpected molecular binding activity for Mu phage tail fibre chaperones2019
- Author(s)
  Sakai Kohei、Iwazaki Takuma、Yamashita Eiki、Nakagawa Atsushi、Sakuraba Fumiya、Enomoto Atsushi、Inagaki Minoru、Takeda Shigeki
- Journal Title
  
  The Journal of Biochemistry
  
  Volume: 166 Issue: 6 Pages: 529-535
- DOI
  10.1093/jb/mvz068
- NAID
  40022093078
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19H03167
[Journal Article] Low-dose X-ray structure analysis of cytochrome c oxidase utilizing high-energy X-rays.2019
- Author(s)
  G. Ueno, A. Shimada, E. Yamashita, K. Hasegawa, T. Kumasaka, K. Shinzawa-Itoh, S. Yoshikawa, T. Tsukihara, M. Yamamoto.
- Journal Title
  
  J Synchrotron Radiat.
  
  Volume: 26 Issue: 4 Pages: 912-921
- DOI
  10.1107/s1600577519006805
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K06092, KAKENHI-PROJECT-18K14635, KAKENHI-PROJECT-17H03646, KAKENHI-PROJECT-19H03167
[Journal Article] Phage tail fibre assembly proteins employ a modular structure to drive the correct folding of diverse fibres2019
- Author(s)
  North Olesia I.、Sakai Kouhei、Yamashita Eiki、Nakagawa Atsushi、Iwazaki Takuma、Buttner Carina R.、Takeda Shigeki、Davidson Alan R.
- Journal Title
  
  Nature Microbiology
  
  Volume: 4 Issue: 10 Pages: 1645-1653
- DOI
  10.1038/s41564-019-0477-7
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19H03167
[Journal Article] Structures of the wild-type MexAB-OprM tripartite pump reveal its complex formation and drug efflux mechanism2019
- Author(s)
  Tsutsumi Kenta、Yonehara Ryo、Ishizaka-Ikeda Etsuko、Miyazaki Naoyuki、Maeda Shintaro、Iwasaki Kenji、Nakagawa Atsushi、Yamashita Eiki
- Journal Title
  
  Nature Communications
  
  Volume: 10 Issue: 1 Pages: 1520-1520
- DOI
  10.1038/s41467-019-09463-9
- NAID
  120007127833
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19H03167
[Journal Article] Crystal structures of OprN and OprJ, outer membrane factors of multidrug tripartite efflux pumps of Pseudomonas aeruginosa.2016
- Author(s)
  Yonehara R, Yamashita E, Nakagawa A.
- Journal Title
  
  Proteins.
  
  Volume: e-pub Issue: 6 Pages: 759-769
- DOI
  10.1002/prot.25022
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25291014
[Journal Article] Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s.2015
- Author(s)
  Song J, Kose S, Watanabe A, Son SY, Choi S, Hong H, Yamashita E, Park IY, Imamoto N, Lee SJ.
- Journal Title
  
  Acta Crystallogr D Biol Crystallogr.
  
  Volume: 71 Issue: 3 Pages: 473-483
- DOI
  10.1107/s1399004714026881
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22121006, KAKENHI-PROJECT-26440109
[Journal Article] Traffic within the Cytochrome b6f Lipoprotein Complex: Gating of the Quinone Portal.2014
- Author(s)
  Hasan S. S., Proctor E. A., Yamashita E., Dokholyan N. V., Cramer W. A.
- Journal Title
  
  Biophys J.
  
  Volume: 107 Issue: 7 Pages: 1620-628
- DOI
  10.1016/j.bpj.2014.08.003
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25291014
[Journal Article] Structural basis for the selective nuclear import of the C2H2 zinc-finger protein Snail by importin β.2014
- Author(s)
  Choi S., Yamashita E., Yasuhara N., Song J., Son S.Y., Won Y.H., Hong H.R., Shin Y.S., Sekimoto T., Park I.Y., Yoneda Y., Lee S.J.
- Journal Title
  
  Acta Crystallogr D Biol Crystallogr.
  
  Volume: 70 Issue: 4 Pages: 1050-1060
- DOI
  10.1107/s1399004714000972
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22121006, KAKENHI-PROJECT-24247036, KAKENHI-PLANNED-25116008
[Journal Article] Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion.2013
- Author(s)
  HaradaK.,YamashitaE.,NakagawaA.,MiyafusaT.,TsumotoK.,UenoT.,ToyamaY.,TakedaS.
- Journal Title
  
  Biochim Biophys Acta
  
  Volume: 1834 Pages: 284-291
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion.2013
- Author(s)
  Harada K
- Journal Title
  
  Biochim Biophys Acta.,
  
  Volume: 1834 Issue: 1 Pages: 284-291
- DOI
  10.1016/j.bbapap.2012.08.015
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21227003, KAKENHI-PROJECT-22370041, KAKENHI-PROJECT-23550237, KAKENHI-PROJECT-24570123, KAKENHI-PROJECT-25291014, KAKENHI-PLANNED-22121006
[Journal Article] Crystallization and preliminary X-ray diffraction analysis of human importin β-Snail zinc finger domain complex.2013
- Author(s)
  Choi S., Song J., Son S.Y., Park I.Y., Yamashita E., Lee S.J..
- Journal Title
  
  Acta Cryst. F
  
  Volume: 69 Issue: 6 Pages: 1049-1051
- DOI
  10.1042/bst20120211
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21227003, KAKENHI-PLANNED-22121006, KAKENHI-PROJECT-22370041, KAKENHI-PROJECT-25291014
[Journal Article] Cramer W. A., Quinone-dependent proton transfer pathways in the photosynthetic cytochrome b6f complex.2013
- Author(s)
  HasanS.S.,YamashitaE.,BaniulisD.,CramerW.A.
- Journal Title
  
  Proc Natl Acad Sci USA
  
  Volume: 110 Pages: 4297-4302
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] A new protein complex promoting the assembly of Rad51 filaments.2013
- Author(s)
  Sasanuma H., Tawaramoto M. S., Lao J. P., Hosaka H., Sanda E., Suzuki M., Yamashita E., Hunter N., Shinohara M., Nakagawa A., Shinohara A.
- Journal Title
  
  Nat. Commun.
  
  Volume: 4 Issue: 1 Pages: 1676-1676
- DOI
  10.1038/ncomms2678
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21227003, KAKENHI-ORGANIZER-22125001, KAKENHI-PLANNED-22125002, KAKENHI-PROJECT-23247029, KAKENHI-PROJECT-25291014
[Journal Article] Lipid-induced conformational changes within the cytochrome b6f complex of oxygenic photosynthesis.2013
- Author(s)
  Hasan S. S., Stofleth J. T., Yamashita E., Cramer W. A.
- Journal Title
  
  Biochemistry.
  
  Volume: 52 Issue: 15 Pages: 2649-2654
- DOI
  10.1021/bi301638h
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21227003, KAKENHI-PROJECT-25291014
[Journal Article] Pathways of colicin import:utilization of BtuB,OmpF porin and the TolC drug-export protein.2012
- Author(s)
  ZakharovS.D.,SharmaO.,ZhalninaM.V.,YamashitaE.,CramerW.A.
- Journal Title
  
  Biochem.Soc.Trans.
  
  Volume: 40 Pages: 1463-1468
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] The host-binding domain of the P2 phage tail spike reveals a trimeric iron-binding structure.2011
- Author(s)
  YamashitaE.,NakagawaA.,TakahashiJ.,TsunodaK.I.,YamadaS.,TakedaS.
- Journal Title
  
  Acta Cryst.
  
  Volume: F67 Pages: 837-841
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1)2011
- Author(s)
  Takeshita K., Yamashita E.
- Journal Title
  
  Proc Natl Acad Sci USA
  
  Volume: 108 Pages: 9055-9059
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Selective nuclear export mechanism of small RNAs.2011
- Author(s)
  Lee S. J., Jiko C., Yamashita E., Tsukihara T.
- Journal Title
  
  Curr. Opin, Struc. Biol.
  
  Volume: 21 Pages: 101-108
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1)2011
- Author(s)
  Takeshita K., Yamashita E.
- Journal Title
  
  Proc Natl Acad Sci U S A
  
  Volume: 108 Pages: 9055-9059
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22121006
[Journal Article] tructural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1).2011
- Author(s)
  Takeshita K., Suetake I., Yamashita E., Suga M., Narita H., Nakagawa A., Tajima S.
- Journal Title
  
  Proc Natl Acad Sci U S A.
  
  Volume: 108 Pages: 9055-9059
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] The host-binding domain of the P2 phage tail spike reveals a trimeric iron-binding structure2011
- Author(s)
  Yamashita E.
- Journal Title
  
  Ada Cryst
  
  Volume: F67 Pages: 837-841
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22121006
[Journal Article] The host-binding domain of the P2 phage tail spike reveals a trimeric iron-binding structure2011
- Author(s)
  Yamashita E.
- Journal Title
  
  Ada Cryst
  
  Volume: F67 Pages: 837-841
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Conservation of Lipid Functions in Cytochrome bc Complexes2011
- Author(s)
  HasanS.S.,YamashitaE.,RyanC.M.,WhiteleggeJ.P.,CramerW.A.
- Journal Title
  
  J Mol.Biol.
  
  Volume: 414 Pages: 145-162
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Selective nuclear export mechanism of small RNAs2011
- Author(s)
  Lee SJ, Jiko C, Yamashita E, Tsukihara T
- Journal Title
  
  Curr Opin Struct Biol
  
  Volume: 21 Issue: 1 Pages: 101-8
- DOI
  10.1016/j.sbi.2010.11.004
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21227003
[Journal Article] Crystallization and preliminary X-ray crystallographic study of the human MST2 SARAH domain.2011
- Author(s)
  SongJ.,HongH.,ChoiS.,LeeY.H.,YamashitaE.,BaeS.C.,ParkI.Y.,LeeS.J.
- Journal Title
  
  Acta Cryst.
  
  Volume: F67 Pages: 1403-1405
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Crystal structure of the cytoplasmic PTEN-like region of Ci-VSP provides insight into substrate specificity and redox regulation of the phosphoinositide phosphatase activity2011
- Author(s)
  Matsuda M.Yamashita E.
- Journal Title
  
  J.Biol.Chem.
  
  Volume: 286 Pages: 23368-23377
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Distinguishing between Cl(-) and O(2)(2-) as the bridging element between Fe(3+) and Cu(2+) in resting-oxidized cytochrome c oxidase.2011
- Author(s)
  Suga M., Yano N., Muramoto K., Shinzawa-Itoh K., Maeda T., Yamashita E., Tsukihara T., Yoshikawa S.
- Journal Title
  
  Acta Cryst.
  
  Volume: D67 Pages: 742-744
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Crystallization and preliminary X-ray crystallographic study of the human MST2 SARAH domain2011
- Author(s)
  Song J., Yamashita E.
- Journal Title
  
  Acta Cryst
  
  Volume: F67 Pages: 1403-1405
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Selective nuclear export mechanism of small RNAs2011
- Author(s)
  Lee S.J., Yamashita E.
- Journal Title
  
  Curre.Opin.Strcut.Biol.
  
  Volume: 21 Pages: 101-108
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Distinguishing between Cl(-) and O(2)(2-) as the bridging element between Fe(3+) and Cu(2+) in resting-oxidized cytochrome c oxidase2011
- Author(s)
  Suga M., Yamashita E.
- Journal Title
  
  Acta Cryst
  
  Volume: D67 Pages: 742-744
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] Crystal structure of the cytoplasmic PTEN-like region of Ci-VSP provides insight into substrate specificity and redox regulation of the phosphoinositide phosphatase activity.2011
- Author(s)
  Matsuda M., Takeshita K., Kurokawa T., Sakata S., Suzuki M., Yamashita E., Okamura Y., Nakagawa A.
- Journal Title
  
  J. Biol. Chem.
  
  Volume: 286 Pages: 23368-23377
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22370041
[Journal Article] 全立体構造決定から切り開く謎の巨大粒子ボルトの機能解明2011
- Author(s)
  田中秀明、加藤公児、住澤知之、山下栄樹
- Journal Title
  
  生化学
  
  Volume: 83 Pages: 392-395
- NAID
  10029068456
- Data Source
  KAKENHI-PROJECT-21227003
[Journal Article] Selective nuclear export mechanism of small RNAs2011
- Author(s)
  Lee S.J., Yamashita E.
- Journal Title
  
  Curre.Opin.Strcut.Biol.
  
  Volume: 21 Pages: 101-108
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22121006
[Journal Article] Bovine cytochrome c oxidase structures enable O2 reduction with minimization of reactive oxygens and provide a proton-pumping gate2010
- Author(s)
  Muramoto K., Yamashita E.
- Journal Title
  
  Proc.Natl.Acad.Sci.USA.
  
  Volume: 107 Pages: 7740-7745
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-22121006
[Journal Article] Yoshinori Fujiyoshi and Tomitake Tsukihara, Structure of the connexin-26 gap junction channel at 3. 5 A resolution2009
- Author(s)
  Shoji Maeda, So Nakagawa, Michihiro Suga, Eiki Yamashita, Atsunori Oshima
- Journal Title
  
  Nature 458
  
  Pages: 597-602
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] A peroxide bridge between Fe and Cu ions in the O2 reduction site of fully oxidized cytochrome c oxidase could suppress the proton pump.2009
- Author(s)
  H. Aoyama, K. Muramoto, K. Shinzawa-Itoh, K. Hirata, E. Yamashita, T. Tsukihara, T. Ogura, S. Yoshikawa
- Journal Title
  
  Proc. Natl. Acad. Sci. USA. 106
  
  Pages: 2165-2169
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] A description of the structural determination procedures of a gap junction channel at 3.5 A resolution.2009
- Author(s)
  Suga M, Maeda S, Nakagawa S, Yamashita E, Tsukihara T.
- Journal Title
  
  Acta Crystallogr D Biol Crystallogr. (in press)
- NAID
  10026107628
- Data Source
  KAKENHI-PROJECT-18207006
[Journal Article] Structure of the connexin 26 gap junction channel at 3.5 A resolution2009
- Author(s)
  Maeda S, Nakagawa S, Suga M, Yamashita E, Oshima A, Fujiyoshi Y, Tsukihara T. Nature
- Journal Title
  
  458(7238)
  
  Pages: 597-602
- Data Source
  KAKENHI-PROJECT-18207006
[Journal Article] A description of the structural determination procedures of a gap junction channel at 3. 5 A resolution.2009
- Author(s)
  Suga M, Maeda S, Nakagawa S, Yamashita E, Tsukihara T.
- Journal Title
  
  Acta Crystallogr. D65
  
  Pages: 758-766
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] A high resolution structure of the pre-microRNA nuclear export machinery.2009
- Author(s)
  Chimari Okada, Eiki Yamashita, Soo Jae Lee, Satoshi Shibata, Jun Katahira, Atsushi Nakagawa, Yoshihiro Yoneda, Tomitake Tsukihara
- Journal Title
  
  Science 326
  
  Pages: 1275-1279
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] A high resolution structure of the pre-microRNA nuclear export machinery2009
- Author(s)
  Okada C, Yamashita E, Lee SJ, Shibata S, Katahira J, Nakagawa A, Yoneda Y, Tsukihara T
- Journal Title
  
  Science
  
  Volume: 32 Issue: 5957 Pages: 1275-1279
- DOI
  10.1126/science.1178705
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21227003
[Journal Article] The structure of rat liver vault at 3. 5 angstrom resolution.2009
- Author(s)
  H. Tanaka, K. Kato, E. Yamashita, T. Sumizawa, Y. Zhou, M. Yao, K. Iwasaki, M. Yoshimura, T. Tsukihara
- Journal Title
  
  Science 323
  
  Pages: 384-388
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] A vault ribonucleoprotein particle exhibiting 39-fold dihedral symmetry.2008
- Author(s)
  Koji Kato, Hideaki Tanaka, Tomoyuki Sumizawa, Masato Yoshimura, Eiki Yamashita, Kenji Iwasaki, Tomitake Tsukihara.
- Journal Title
  
  Acta Crystallogr. D64
  
  Pages: 525-531
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] Structure of human monoamine oxidase at 2. 2 A resolution: The control of opening the entry for substrates/inhibitors.2008
- Author(s)
  Se-Young Son, Jichun Ma, Youhei Kondou, Masato Yoshimura, Eiki Yamashita,, Tomitake Tsukihara.
- Journal Title
  
  Proc. Natl. Acad. USA 105
  
  Pages: 5739-5744
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] Structural analysis of Arabidopsis CnfU protein: an iron-sulfur cluster biosynthetic scafold in chloroplasts.2008
- Author(s)
  T. Yabe, E. Yamashita, A. Kikuchi, K. Morimoto, A. Nakagawa, T. Tsukihara, M. Nakai
- Journal Title
  
  J. Mol. Biol. 381
  
  Pages: 160-173
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] Structure of the cytochrome b6f complex: quinone analogue inhibi tors as li sands of heme cn2007
- Author(s)
  Yamashita E.
- Journal Title
  
  J Mol. Biol. 370
  
  Pages: 39-52
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18770088
[Journal Article] A histidine residue as a controlling site for dioxygen reduction and proton pumping of cytochrome c oxidase2007
- Author(s)
  Kazumasa Muramoto, Kunio Hirata, Kyoko Shinzawa-Itoh, Shinji Yoko-o, Eiki Yamashita, Hiroshi Aoyama, Tomitake Tsukihara,, Shinya Yoshikawa.
- Journal Title
  
  Proc. Natl. Acad. USA 104
  
  Pages: 7881-7886
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] Structures and physiological roles of all the integral lipids of bovine heart cytochrome c oxidase.2007
- Author(s)
  Kyoko Shinzawa-Itoh, Hiroshi Aoyama, Kazumasa Muramoto, Hirohito Terada, Tsuyoshi Kurauchi, Yoshiki Tadehara, Akiko Yamasaki, Takashi Sugimura, Sadamu Kurono, Kazuo Tsujimoto, Tsunehiro Mizushima, Eiki Yamashita, Tomitake Tsukihara, Shinya Yoshikawa
- Journal Title
  
  EMBO J. 26
  
  Pages: 1713-1725
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] Crystal structures of a multidrug transporter reveal a functionally rotating mechanism2006
- Author(s)
  Murakami S., Nakashima R., Yamashita E., Matsumoto T., Yamaguchi A.
- Journal Title
  
  Nature 443
  
  Pages: 173-179
- Data Source
  KAKENHI-PROJECT-18770088
[Journal Article] The asymmetric IscA homodimer with an exposed [2Fe-2S] cluster suggests the structural basis of the Fe-S cluster biosynthetic scaffold.2006
- Author(s)
  Morimoto K, Yamashita E, Kondou Y, Lee SJ, Arisaka F, Tsukihara T, Nakai M.
- Journal Title
  
  J Mol Biol. 360
  
  Pages: 117-132
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] Crystal tructures of the catalytic domain of human stromelysin-1(MMP-3) and collagenase-3 (MMP-13) with a hydroxamic acid inhibitor SM-254532006
- Author(s)
  Kohno T., Hochigai H., Yamashita E., Tsukihara T., Kanaoka M.
- Journal Title
  
  Biochemical and Biophysical Research Communications 344
  
  Pages: 315-322
- Data Source
  KAKENHI-PROJECT-18770088
[Journal Article] Crystal Structure of DsbB-DsbA Complex Revealing a Cysteine Relocation Mechanism2006
- Author(s)
  Inaba K., Murakami S., Suzuki M., Nakagawa A., Yamashita E., Okada K., Ito K.
- Journal Title
  
  Cell 127
  
  Pages: 789-801
- Data Source
  KAKENHI-PROJECT-18770088
[Journal Article] The asymmetric IscA homodimer with an exposed [2Fe-2S]cluster suggests the structural basis of the Fe-S cluster biosynthetic scaffold.2006
- Author(s)
  Morimoto K., Yamashita E., Kondou Y., Lee S.J., Arisaka F., Tsukihara T., Nakai M.
- Journal Title
  
  JournaL of molecular Biology 360
  
  Pages: 117-132
- Data Source
  KAKENHI-PROJECT-18770088
[Journal Article] In Meso Structure of the Cobalamin Transporter, BtuB, at 1.95 A Resolution2006
- Author(s)
  Cherezov V., Yamashita E., Liu W., Zhalnina M., Cramer W.A., Caffrey M.
- Journal Title
  
  JournaL of molecular Biology 364
  
  Pages: 716-734
- Data Source
  KAKENHI-PROJECT-18770088
[Journal Article] Absolute configuration of the hydroxyfarnesylethyl group of haem A, determined by X-ray structural analysis of bovine heart cytochrome c oxidase using methods applicable at 2. 8 A resolution.2005
- Author(s)
  E. Yamashita, H. Aoyama, M. Yao, K. Muramoto, K. Shinzawa-Itoh, S. Yoshikawa,, T. Tsukihara
- Journal Title
  
  Acta Cryst. D61
  
  Pages: 1373-1377
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] Structure of the Central Hub of Bacteriophage Mu Baseplate Determined by X-ray Crystallography of gp44.2005
- Author(s)
  Y. Kondou, D. Kitagawa, S. Takeda, Y. Tsuchiya, E. Yamashita, M. Mizuguchi, K. Kawano,, T. Tsukihara
- Journal Title
  
  J. Mol. Biol. 352
  
  Pages: 976-985
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-16087206
[Journal Article] Absolute configuration of the hydroxyfarnesylethyl group of haem A, determined by X-ray structural analysis of bovine heart cytochrome c oxidase using methods applicable at 2.8A resolution.2005
- Author(s)
  E.Yamashita
- Journal Title
  
  Acta Cryst. D61
  
  Pages: 1373-1377
- Data Source
  KAKENHI-PROJECT-16087206
[Patent] 球状粒子を形成する新規タンパク質、およびそのタンパク質をコードする新規遺伝子2003
- Inventor(s)
  中川敦史, 山下栄樹, 田中秀明, 月原冨武, 石野良純
- Industrial Property Rights Holder
  科学技術振興事業団
- Filing Date
  2003-01-31
- Acquisition Date
  2004-08-19
- Description
  「研究成果報告書概要(和文)」より
- Data Source
  KAKENHI-PROJECT-14380319
[Presentation] 緑膿菌由来膜融合タンパク質MexXの機能解明に向けた構造解析2022
- Author(s)
  上田雄士、荒谷剛史、米原涼、池田悦子、堤研太、中川敦史、山下栄樹
- Organizer
  日本結晶学会
- Data Source
  KAKENHI-PROJECT-21K19337
[Presentation] 核外輸送に置ける Exportin-5 の構造基盤/The structural basis on nuclear export of Exportin-5.2015
- Author(s)
  山澤龍治、小林武、慈幸千真理、月原冨武、中川敦史、山下栄樹
- Organizer
  第15回　日本蛋白質科学会年会
- Place of Presentation
  あわぎんホール（徳島県徳島市）
- Year and Date
  2015-06-24
- Data Source
  KAKENHI-PROJECT-25291014
[Presentation] Synchrotron radiation beam line of the Institute for Protein Research2015
- Author(s)
  Eiki Yamashita
- Organizer
  International Symposium on Establishment of Structural Biology Network in the Asian Region
- Place of Presentation
  Hsinchu（Taiwan）
- Year and Date
  2015-09-30
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-25291014
[Presentation] 緑膿菌由来異物排出トランスポーターMuxBのX 線結晶構造解析2015
- Author(s)
  比嘉悠貴、米原涼、中川敦史、山下栄樹
- Organizer
  日本結晶学会年会
- Place of Presentation
  大阪府立大学中百舌鳥キャンパス（大阪府堺市）
- Year and Date
  2015-10-17
- Data Source
  KAKENHI-PROJECT-25291014
[Presentation] SPring-8生体超分子複合体構造解析ビームライン（大阪大学蛋白質研究所）BL44XUの現状2014
- Author(s)
  山下栄樹
- Organizer
  第27回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  広島国際会議場（広島県広島市）
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] SPring-8生体超分子複合体構造解析ビームライン（大阪大学蛋白質研究所）BL44XUの現状2014
- Author(s)
  山下栄樹
- Organizer
  第27回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  広島国際会議場（広島）
- Data Source
  KAKENHI-PROJECT-25291014
[Presentation] SPring-8生体超分子複合体構造解析ビームライン（大阪大学蛋白質研究所）BL44XUの現状2014
- Author(s)
  山下栄樹
- Organizer
  第27回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  広島国際会議場（広島）
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] Coherent Diffraction Imaging for Structure Determination for Spherical Biological Particles2013
- Author(s)
  Atsushi Nakagawa, Akifumi Higashiura, Kenji Iwasaki, Marina Murakami, Eiki Yamashita, Kazuki Takeda, Yu Hirano, Yuya Hanazono, Kiyofumi Takaba, Masahito Hibi, Yukiko Tomisaki, Kunio Miki
- Organizer
  The 12th Conference of the Asian Crystallographic Association
- Place of Presentation
  Hong Kong University of Science and Technology, Hong Kong
- Invited
- Data Source
  KAKENHI-PROJECT-25291014
[Presentation] SPring-8生体超分子複合体構造解析ビームライン（大阪大学蛋白質研究所）BL44XUの現状2013
- Author(s)
  山下栄樹
- Organizer
  第26回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  名古屋大学（愛知県）
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] SPring-8生体超分子複合体構造解析ビームライン（大阪大学蛋白質研究所）BL44XUの現状2013
- Author(s)
  山下栄樹
- Organizer
  第26回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  名古屋大学
- Year and Date
  2013-01-12
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] リガンドフリー型Exportin-5 の構造解析2013
- Author(s)
  山澤龍治・小林武・慈幸千真理・李守宰・中川敦史・柴田理志・岡正啓・片平じゅん・米田悦啓・月原冨武・山下栄樹
- Organizer
  平成25年度日本結晶学会年会及び総会
- Place of Presentation
  熊本大学黒髪南地区（熊本県熊本市）
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] Spring-8 生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XU の現状2013
- Author(s)
  山下栄樹
- Organizer
  日本放射光学会
- Place of Presentation
  名古屋大学
- Year and Date
  2013-01-12
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] SPring-8生体超分子複合体構造解析ビームライン（大阪大学蛋白質研究所）BL44XUの現状2013
- Author(s)
  山下栄樹
- Organizer
  第26回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  名古屋大学
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] SPring-8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状2012
- Author(s)
  山下栄樹
- Organizer
  第25回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  鳥栖市民文化会館・中央公民館
- Year and Date
  2012-01-08
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] Attempt to study structural analysis of disordered region using the low resolution data2012
- Author(s)
  Kiyohito Kihira, Jiyoung Kang, Shoji Maeda, So Nakagawa, Yuko Misumi, Michihiro Suga, Eiki Yamashita, Masaru Tateno, Tomitake Tsukihara
- Organizer
  AsCA12/ CRYSTAL28 Adelaide Convention Centre
- Place of Presentation
  Adelaide, Australia
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] Exportin-5 によるRNAsの核外輸送メカニズムの解明2012
- Author(s)
  山澤龍治、山下栄樹
- Organizer
  日本蛋白質科学会
- Place of Presentation
  名古屋大学
- Year and Date
  2012-06-22
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] SPring-8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状2012
- Author(s)
  山下栄樹
- Organizer
  第25回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  鳥栖市民文化会館・中央公民館
- Year and Date
  2012-01-08
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] SPring-8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状2012
- Author(s)
  山下栄樹
- Organizer
  第25回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  鳥栖市民文化会館・中央公民館(佐賀県鳥栖市)
- Year and Date
  2012-01-08
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] Spring-8 生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XU の現状2012
- Author(s)
  山下栄樹
- Organizer
  日本放射光学会
- Place of Presentation
  鳥栖市民文化会館
- Year and Date
  2012-01-08
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] SPring-8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状2011
- Author(s)
  山下栄樹
- Organizer
  第24回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  つくば国際会議場
- Year and Date
  2011-01-10
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] SPring-8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状2011
- Author(s)
  山下栄樹
- Organizer
  第24回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  つくば国際会議場(茨城県つくば市)
- Year and Date
  2011-01-10
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] SPring-8生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XUの現状2011
- Author(s)
  山下栄樹
- Organizer
  第24回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  つくば国際会議場(茨城県)
- Year and Date
  2011-01-10
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] Nuclear translocation machinery of pre-microRNA.2010
- Author(s)
  SooJaeLee、EikiYamashita
- Organizer
  AsCA2010
- Place of Presentation
  プサン(韓国)
- Year and Date
  2010-11-01
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] タンパク質合成を抑制する小さなRNA を輸送する仕組みの解明2010
- Author(s)
  山下栄樹
- Organizer
  SPring-8合同コンファレンス
- Place of Presentation
  東京ステーションコンファレンス
- Year and Date
  2010-11-04
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] pre-microRNA核外輸送複合体のX線結晶構造解析2010
- Author(s)
  山下栄樹
- Organizer
  BMB2010
- Place of Presentation
  神戸ポートピアランド
- Year and Date
  2010-12-10
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] SPring-8阪大蛋白研ビームラインBL44XUの現状2010
- Author(s)
  山下栄樹
- Organizer
  日本結晶学会年会
- Place of Presentation
  大阪大学
- Year and Date
  2010-12-03
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] pre-microRNA核外輸送複合体のX線結晶構造解析2010
- Author(s)
  山下栄樹
- Organizer
  BMB2010
- Place of Presentation
  神戸ポートピアランド(兵庫県)
- Year and Date
  2010-12-10
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] pre-microRNA核外輸送複合体のX線結晶構造解析2010
- Author(s)
  山下栄樹
- Organizer
  BMB2010
- Place of Presentation
  神戸ポートピアランド
- Year and Date
  2010-12-10
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] タンパク質合成を抑制する小さなRNAを輸送する仕組みの解明2010
- Author(s)
  山下栄樹
- Organizer
  第2回SPring-8合同コンファレンス
- Place of Presentation
  東京ステーションコンファレンス(招待講演)
- Year and Date
  2010-11-04
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] タンパク質合成を抑制する小さなRNAを輸送する仕組みの解明2010
- Author(s)
  山下栄樹
- Organizer
  第2回SPring-8合同コンファレンス
- Place of Presentation
  東京ステーションコンファレンス(東京都千代田区)
- Year and Date
  2010-11-04
- Invited
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] Spring-8 阪大蛋白研ビームラインBL44XU の現状2010
- Author(s)
  山下栄樹
- Organizer
  日本結晶学会
- Place of Presentation
  大阪大学
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] タンパク質合成を抑制する小さなRNAを輸送する仕組みの解明2010
- Author(s)
  山下栄樹
- Organizer
  第2回SPring-8合同コンファレンス
- Place of Presentation
  東京ステーションコンファレンス(東京都)(招待講演)
- Year and Date
  2010-11-04
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] タンパク質合成を抑制する小さなRNAを輸送する仕組みの解明2010
- Author(s)
  山下栄樹
- Organizer
  第2回SPring-8合同コンファレンス
- Place of Presentation
  東京ステーションコンファレンス(招待講演)
- Year and Date
  2010-11-04
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] pre-microRNA 核外輸送複合体のX 線結晶構造解析2010
- Author(s)
  山下栄樹
- Organizer
  BMB2010
- Place of Presentation
  神戸国際会議場
- Year and Date
  2010-12-10
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] microRNA核外輸送複合体のX線結晶構造解析2010
- Author(s)
  慈幸千真理、山下栄樹
- Organizer
  日本蛋白質科学会
- Place of Presentation
  札幌コンベンションセンター
- Year and Date
  2010-06-18
- Data Source
  KAKENHI-PROJECT-22370041
[Presentation] SPring-8阪大蛋白研ビームラインBL44XUの現状2010
- Author(s)
  山下栄樹
- Organizer
  日本結晶学会年会
- Place of Presentation
  大阪大学(大阪府)
- Year and Date
  2010-12-03
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] S低・中分解能データから引き出される超分子の振るまい-高難度タンパク質複合体の構造解析を目指して2009
- Author(s)
  山下栄樹
- Organizer
  日本結晶学会
- Place of Presentation
  関西学院大学(兵庫県)
- Year and Date
  2009-12-05
- Data Source
  KAKENHI-PROJECT-16087206
[Presentation] 巨大複合体結晶の放射光X線データ測定と処理-巨大超分子の構造に原子レベルで迫る2009
- Author(s)
  山下栄樹
- Organizer
  第9回日本蛋白質科学会年会
- Place of Presentation
  全日空ホテルニュースカイ, 熊本
- Data Source
  KAKENHI-PROJECT-16087206
[Presentation] 巨大複合体結晶の放射光X線データ測定と処理-巨大超分子の構造に原子レベルで迫る2009
- Author(s)
  山下栄樹
- Organizer
  第9回日本蛋白質科学会年会
- Place of Presentation
  全日空ホテルニュースカイ,熊本
- Data Source
  KAKENHI-PROJECT-16087206
[Presentation] 巨大複合体結晶の放射光X線データ測定と処理 -巨大超分子の構造に原子レベルで迫る2009
- Author(s)
  山下栄樹
- Organizer
  第9回日本蛋白質科学会年会
- Place of Presentation
  全日空ホテルニュースカイ, 熊本
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] S低・中分解能データから引き出される超分子の振るまい-高難度タンパク質複合体の構造解析を目指して2009
- Author(s)
  山下栄樹
- Organizer
  日本結晶学会
- Place of Presentation
  関西学院大学(兵庫県)
- Year and Date
  2009-12-05
- Data Source
  KAKENHI-PROJECT-21227003
[Presentation] SPring-8生体超分子複合体構造解析ビームライン(BL44XU)の現状2008
- Author(s)
  山下栄樹
- Organizer
  第21回日本放射光学会年会・放射光科学合同シンポジウム
- Place of Presentation
  立命館大学びわこ草津キャンパス
- Year and Date
  2008-01-13
- Data Source
  KAKENHI-PROJECT-18770088
[Presentation] structure of the Cytochrome b_6f Compex: Quinone Analogue Inhibitors as Ligands of Heme c_n2007
- Author(s)
  Yamashita E.
- Organizer
  The 8th Conference of the Asian Crystallographic Association
- Place of Presentation
  Howard International House Taipei, Taiwan R. O. C.
- Year and Date
  2007-09-06
- Data Source
  KAKENHI-PROJECT-18770088
[Presentation] SPring-8 BL44XU, Beamline Designed for a Structure Analysis of Large Biological Macromolecular Assemblies
- Author(s)
  Akifumi Higashiura*, Eiki Yamashita*, Masato Yoshimura, Kazuya Hasegawa, Yukito Furukawa, Takashi Kumasaka, Go Ueno, Masaki Yamamoto, Tomitake Tsukihara, Atsushi Nakagawa
- Organizer
  The 12th International Conference on Synchrotron Radiation Instrumentation (SRI 2015)
- Place of Presentation
  New York City
- Year and Date
  2015-07-06 – 2015-07-10
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] SPring-8生体超分子複合体構造解析ビームライン（大阪大学蛋白質研究所）BL44XUの現状
- Author(s)
  山下栄樹, 東浦彰史, 吉村政人, 長谷川和也, 熊坂崇，古川行人，大端通，上野剛，山本雅貴，吉川信也，月原冨武，中川敦史
- Organizer
  第28回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  立命館大学びわこ・くさつキャンパス
- Year and Date
  2015-01-10 – 2015-01-12
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] IPR Beamline for Macromolecular Assemblies at SPring-8 (BL44XU)
- Author(s)
  Eiki Yamashita, Akifumi Higashiura, Masato Yoshimura, Kazuya Hasegawa, Yukito Furukawa, Toru Ohata, Takashi Kumasaka, Go Ueno, Masaki Yamamoto, Atsushi Nakagawa
- Organizer
  23rd Congress and General Assembly of the International Union of Crystallography (IUCr2014)
- Place of Presentation
  Montreal
- Year and Date
  2014-08-05 – 2014-08-12
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] 核外輸送におけるExportin-5の構造基盤
- Author(s)
  山澤龍治，小林武，慈幸千真理，月原冨武，中川敦史，山下栄樹
- Organizer
  第15回日本蛋白質科学会年会
- Place of Presentation
  あわぎんホール
- Year and Date
  2015-06-24 – 2015-06-26
- Data Source
  KAKENHI-PLANNED-22121006
[Presentation] IPR Beamline for Macromolecular Assemblies at SPring-8 (BL44XU)
- Author(s)
  Eiki Yamashita, Akifumi Higashiura, Masato Yoshimura, Kazuya Hasegawa, Yukito Furukawa, Toru Ohata, Takashi Kumasaka, Go Ueno, Masaki Yamamoto, Atsushi Nakagawa
- Organizer
  23rd Congress and General Assembly of the International Union of Crystallography
- Place of Presentation
  Montreal
- Year and Date
  2014-08-05 – 2014-08-12
- Data Source
  KAKENHI-PROJECT-25291014
[Presentation] SPring-8生体超分子複合体構造解析ビームライン（大阪大学蛋白質研究所）BL44XUの現状
- Author(s)
  山下栄樹, 東浦彰史, 吉村政人, 長谷川和也, 熊坂崇，古川行人，大端通，上野剛，山本雅貴，吉川信也，月原冨武，中川敦史
- Organizer
  第28回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  立命館大学びわこ・くさつキャンパス
- Year and Date
  2015-01-10 – 2015-01-12
- Data Source
  KAKENHI-PROJECT-25291014
[Presentation] 緑膿菌由来異物排出蛋白質のX線結晶構造解析
- Author(s)
  住田一真，米原涼，中江太治，中川敦史，山下栄樹
- Organizer
  第28回日本放射光学会年会放射光科学合同シンポジウム
- Place of Presentation
  立命館大学びわこ・くさつキャンパス
- Year and Date
  2015-01-10 – 2015-01-12
- Data Source
  KAKENHI-PROJECT-25291014

1. NAKAGAWA ATSUSHI (20188890)

# of Collaborated Projects: 5 results

# of Collaborated Products: 10 results
2. TSUKIHARA Tomitake (00032277)

# of Collaborated Projects: 4 results

# of Collaborated Products: 0 results
3. TANAKA Hideaki (40346169)

# of Collaborated Projects: 3 results

# of Collaborated Products: 3 results
4. ITO(SHINZWA) Kyouko (70206316)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
5. YAMAZAWA Ryuji

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
6. KOBAYASHI Takeshi

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
7. HAKOSHIMA Toshio (00164773)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. MAENAKA Katsumi (10322752)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. SATO Chikara (00357146)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. FUKAI Shuya (10361792)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. SENDA Toshiya (30272868)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. INAGAKI Fuyuhiko (70011757)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. MISHIMA Masaki (70346310)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. KAINOSHO Masatsune (20137029)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. YOSHIDA Masasuke (90049073)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. TANAKA Keiji (10108871)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. KAIBUCHI Kozo (00169377)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
18. ISOGAI Akira (20011992)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
19. HIGASHIURA Akifumi (90598129)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
20. 吉川信也 (40068119)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
21. MATSUMOTO Ami

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
22. YONEHARA RYO

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
23. IKEDA ETSUKO

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
24. HIGA YUKI

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
25. SUMITA KAZUMA

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
26. 堤研太

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
27. 月原富武

# of Collaborated Projects: 0 results

# of Collaborated Products: 21 results
28. 島田敦広

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results
29. 岡田有意

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Yamashita Eiki 山下 栄樹

YAMASHITA Eiki 山下 栄樹

Research Projects

Research Products

Co-Researchers

緑膿菌の多剤耐性化機構の解明に向けた薬剤排出タンパク質複合体の構造基盤Principal Investigator

Principal Investigator

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多剤排出タンパク質複合体の阻害剤開発に向けた基質との網羅的な構造活性相関解析Principal Investigator

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Structure basis for multidrug resistance efflux pump spanning both membranes in Pseudomonas aeruginosaPrincipal Investigator

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Structural basis for multidrug tripartite efflux pump through both the inner and outer membranes in Pseudomonas aeruginosa.Principal Investigator

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Principal Investigator

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Structural basis for nuclear transport mechanism by the nuclear transport receptor and improvement of a synchrotron beamline.Principal Investigator

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Elucidation of nuclear export machinery of tRNA by crystal structural analysis of exportin/tRNA complexPrincipal Investigator

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チトクロム酸化酵素結晶の高精度高分解能X線回折強度データ収集システムの開発Principal Investigator

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Principal Investigator

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膜蛋白質複合体チトクロム酸化酵素分子内のリン脂質の構造と機能研究Principal Investigator

Principal Investigator

Project Period (FY)

Yamashita Eiki 山下栄樹

YAMASHITA Eiki 山下栄樹