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SHARIF JAFAR  SHARIF JAFAR

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SHARIF Jafar  SHARIF JAFAR

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Researcher Number 00577968
Affiliation (Current) 2025: 国立研究開発法人理化学研究所, 生命医科学研究センター, 専任研究員
Affiliation (based on the past Project Information) *help 2018 – 2024: 国立研究開発法人理化学研究所, 生命医科学研究センター, 専任研究員
2017: 独立法人理化学研究所, 生命医科学研究センター, 研究員
2015: 国立研究開発法人理化学研究所, 統合生命医科学研究センター, 研究員
2014: 独立行政法人理化学研究所, 統合生命 医科学研究センター, 研究員
Review Section/Research Field
Principal Investigator
Basic Section 43050:Genome biology-related / Genome biology
Except Principal Investigator
Laboratory animal science
Keywords
Principal Investigator
Transcription / DNA methylation / DNAメチル化 / H2Bモノユビキチン化 / エピゲノム / DNA複製タイミング / 3次元ゲノム / Retrotransposon / RNF20 / H2B monoubiquitination … More / DNA replication / A/B compartments / Heterochromatin / Euchromatin / Epigenome / 3D genome / CTCF / H2Bub / SINE / Replication timing / データ解析 / 転写解析 / 皮膚バリア機能 / 核内3次元構造 / エピジェネティクス / H3K27me3 / Differentiated cells / Basal layer / 3D genome organization / Barrier Function / Programmed cel death / 3D nuclear regulation / Stratum granulosum / Keratinocytes / Barrier function / Gene expression / 3D nuclear domain / Epigenetics / Keratinocyte / Epidermis / ChIP / ES cells / Conditional KO / H3K9 trimethylation / NP97/UHRF2 / NP95/UHRF1 / LTR-derived sequences / hemi-methylated DNA / Development / Placenta / IAP / Endogenous retroviruses / H3K9me3 / SETDB1 / Hemimethylated DNA / NP95 … More
Except Principal Investigator
ヒストン修飾 / リプログラミング / 配偶子形成 / 卵子形成 / 卵子 / DNAメチル化 / エピジェネティクス / 生殖細胞 / 着床前発生 / 初期発生 / 卵母細胞 / UHRF1 Less
  • Research Projects

    (5 results)
  • Research Products

    (18 results)
  • Co-Researchers

    (7 People)
  •  3次元ゲノム形成の分子基盤解明及びその生物学的な意義の解析Principal Investigator

    • Principal Investigator
      SHARIF JAFAR
    • Project Period (FY)
      2024 – 2026
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43050:Genome biology-related
    • Research Institution
      Institute of Physical and Chemical Research
  •  A link between genome and epigenome for regulation of replication timingPrincipal Investigator

    • Principal Investigator
      SHARIF Jafar
    • Project Period (FY)
      2021 – 2023
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43050:Genome biology-related
    • Research Institution
      Institute of Physical and Chemical Research
  •  Role of the epigenome and 3D nuclear dynamics in maintenance of skin barrier functionPrincipal Investigator

    • Principal Investigator
      SHARIF Jafar
    • Project Period (FY)
      2018 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 43050:Genome biology-related
    • Research Institution
      Institute of Physical and Chemical Research
  •  Role of UHRF1 during oogenesis and early embryogenesis

    • Principal Investigator
      UNOKI Motoko
    • Project Period (FY)
      2015 – 2017
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Laboratory animal science
    • Research Institution
      Kyushu University
  •  Mechanistic link between DNA methylation and H3K9 trimethylation in mammalian cells mediated by two novel SRA proteins- Np95 and Np97Principal Investigator

    • Principal Investigator
      SHARIF JAFAR
    • Project Period (FY)
      2014 – 2015
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Genome biology
    • Research Institution
      Institute of Physical and Chemical Research

All 2023 2022 2021 2017 2016 2015 Other

All Journal Article Presentation

  • [Journal Article] Bridging multiple dimensions: roles of transposable elements in higher-order genome regulation2023

    • Author(s)
      Jafar Sharif, Haruhiko Koseki, Nicholas F Parrish
    • Journal Title

      Curr Opin Genet Dev .

      Volume: 80 Pages: 102035-102035

    • DOI

      10.1016/j.gde.2023.102035

    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K06129
  • [Journal Article] Efficient de novo assembly and modification of large DNA fragments2022

    • Author(s)
      Jiang S, Tang Y, Xiang L, Zhu X, Cai Z, Li L, Chen Y, Chen P, Feng Y, Lin X, Li G, Sharif J, Dai J
    • Journal Title

      Sci China Life Sci.

      Volume: 65 (7) Issue: 7 Pages: 1445-1455

    • DOI

      10.1007/s11427-021-2029-0

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K06129
  • [Journal Article] PCGF1-PRC1 links chromatin repression with DNA replication during hematopoietic cell lineage commitment2022

    • Author(s)
      Takano J, Ito S, Dong Y, Sharif J, Nakajima-Takagi Y, Umeyama T, Han YW, Isono K, Kondo T, Iizuka Y, Miyai T, Koseki Y, Ikegaya M, Sakihara M, Nakayama M, Ohara O, Hasegawa Y, Hashimoto K, Arner E, Klose RJ, Iwama A, Koseki H, Ikawa T
    • Journal Title

      Nat Commun.

      Volume: 13 (1) Issue: 1 Pages: 7159-7159

    • DOI

      10.1038/s41467-022-34856-8

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K06129, KAKENHI-PROJECT-21K16257, KAKENHI-PROJECT-19H05653, KAKENHI-PLANNED-19H05745, KAKENHI-PLANNED-19H05746
  • [Journal Article] Structural basis for activation of DNMT12022

    • Author(s)
      Kikuchi A, Onoda H, Yamaguchi K, Kori S, Matsuzawa S, Chiba Y, Tanimoto S, Yoshimi S, Sato H, Yamagata A, Shirouzu M, Adachi N, Sharif J, Koseki H, Nishiyama A, Nakanishi M, Defossez PA, Arita K
    • Journal Title

      Nat Commun.

      Volume: 13 (1) Issue: 1 Pages: 1-11

    • DOI

      10.1038/s41467-022-34779-4

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K06129, KAKENHI-PUBLICLY-21H05733, KAKENHI-PROJECT-19H03153, KAKENHI-ORGANIZER-19H05739, KAKENHI-PUBLICLY-21H00272, KAKENHI-PROJECT-23K23828, KAKENHI-PLANNED-19H05741
  • [Journal Article] A unique mode of keratinocyte death requires intracellular acidification2021

    • Author(s)
      Matsui T, Kadono-Maekubo N, Suzuki Y, Furuichi Y, Shiraga K, Sasaki H, Ishida A, Takahashi S, Okada T, Toyooka K, Sharif J, Abe T, Kiyonari H, Tominaga M, Miyawaki A, Amagai M
    • Journal Title

      Proc Natl Acad Sci U S A

      Volume: 118 Issue: 17

    • DOI

      10.1073/pnas.2020722118

    • Data Source
      KAKENHI-PROJECT-18K06188
  • [Journal Article] Role of UHRF1 in de novo DNA methylation in oocytes and maintenance methylation in preimplantation embryos.2017

    • Author(s)
      Maenohara S, Unoki M, Toh H, Ohishi H, Sharif, J, Koseki, H, Sasaki H.
    • Journal Title

      PLoS Genet

      Volume: 13 Issue: 10 Pages: e1007042-e1007042

    • DOI

      10.1371/journal.pgen.1007042

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-ORGANIZER-25112001, KAKENHI-PLANNED-25112010, KAKENHI-PROJECT-16H02622, KAKENHI-PROJECT-15K06803
  • [Journal Article] Activation of Endogenous Retroviruses in Dnmt1-/- ESCs Involves Disruption of SETDB1-Mediated Repression by NP95 Binding to Hemimethylated DNA.2016

    • Author(s)
      Sharif J, Endo TA, Nakayama M, Karimi MM, Shimada M, Katsuyama K, Goyal P, Brind'Amour J, Sun MA, Sun Z, Ishikura T, Mizutani-Koseki Y, Ohara O, Shinkai Y, Nakanishi M, Xie H, Lorincz MC, Koseki H.
    • Journal Title

      Cell Stem Cell

      Volume: Epub ahead of print Issue: 1 Pages: 999-999

    • DOI

      10.1016/j.stem.2016.03.013

    • Peer Reviewed / Acknowledgement Compliant / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-26870847, KAKENHI-PROJECT-16H02622, KAKENHI-PROJECT-15K08280, KAKENHI-PROJECT-16K15239, KAKENHI-PROJECT-26250027
  • [Presentation] エピジェネティック制御因子Uhrf1の卵子及び初期胚細胞質における新機能2017

    • Author(s)
      上村修平、前之原章司、小倉淳郎、井上貴美子、山縣一夫、堀真由子、Jafar Sharif、古関明彦、植田幸嗣、鵜木元香、佐々木裕之
    • Organizer
      第40回日本分子生物学会年会(2017年度生命科学系学会合同年次大会)
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] 卵子形成および着床前発生過程のDNAメチル化制御におけるUhrf1の役割2016

    • Author(s)
      前之原章司, 鵜木 元香, Jafar Sharif, 古関 明彦, 藤 英博, 大石 裕晃, 佐々木 裕之
    • Organizer
      第39回分子生物学学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2016-11-30
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] 卵子形成過程および初期胚発生期のDNAメチル化制御におけるUhrf1の重要性2016

    • Author(s)
      前之原章司, 鵜木 元香, Jafar Sharif, 古関 明彦, 藤 英博, 大石 裕晃, 佐々木 裕之
    • Organizer
      第10回エピジェネティクス研究会年会
    • Place of Presentation
      大阪
    • Year and Date
      2016-05-19
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] Essential role of Uhrf1 during oocyte growth and preimplantation development2016

    • Author(s)
      Shoji Maenohara, Motoko Unoki, Hidehiro Toh, Hiroaki Ohishi, Jafar Sharif, Haruhiko Koseki, Hiroyuki Sasaki
    • Organizer
      the 4th Cold Spring Harbor Asia conference on Chromatin, Epigenetics and Transcription
    • Place of Presentation
      蘇州
    • Year and Date
      2016-05-09
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] 卵子形成過程および初期発生におけるUHRF1の役割2016

    • Author(s)
      前之原章司, 鵜木 元香, Jafar Sharif, 古関 明彦, 藤 英博, 大石 裕晃, 佐々木 裕之
    • Organizer
      第1回 エピジェネティック修飾読み手分子の構造と生命機能をつなぐ会
    • Place of Presentation
      福岡
    • Year and Date
      2016-09-13
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] 卵子形成過程および初期胚発生におけるUhrf1の重要性2015

    • Author(s)
      前之原 章司, 鵜木 元香, 小倉 淳郎, 井上 貴美子, 山縣 一夫, 堀 真由子, Jafar Sharif, 古関 明彦, 藤 英博, 大石 裕晃, 植田 幸嗣, 佐々木 裕之
    • Organizer
      第60回日本人類遺伝学会
    • Place of Presentation
      京王プラザホテル
    • Year and Date
      2015-10-14
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] 卵子形成過程および初期胚発生におけるUhrf1の重要性2015

    • Author(s)
      前之原 章司, 鵜木 元香, 小倉 淳郎, 井上 貴美子, 山縣 一夫, 堀 真由子, Jafar Sharif, 古関 明彦, 藤 英博, 大石 裕晃, 植田 幸嗣, 佐々木 裕之
    • Organizer
      第38回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2015-12-01
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] 卵子形成過程および初期胚発生において細胞質に存在するUhrf1の重要性2015

    • Author(s)
      前之原 章司, 鵜木 元香, 小倉 淳郎, 井上 貴美子, 山縣 一夫, 堀 真由子, Jafar Sharif, 古関 明彦, 藤 英博, 大石 裕晃, 植田 幸嗣, 佐々木 裕之
    • Organizer
      生殖エピゲノム若手勉強会 2015
    • Place of Presentation
      ラフォーレ修善寺
    • Year and Date
      2015-07-23
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] Epigenetic regulator Uhrf1 plays a role in the oocyte cytoplasm that is essential for pre-implantation development2015

    • Author(s)
      Motoko Unoki, Shoji Maenohara, Atsuo Ogura, Kimiko Inoue, Kazuo Yamagata, Hidehiro Toh, Hiroaki Ohishi, Jafar Sharif, Haruhiko Koseki, Koji Ueda, Hiroyuki Sasaki
    • Organizer
      第40回 内藤コンファレンス「エピジェネティクス―ヒストンコードから治療戦略へ」
    • Place of Presentation
      シャトレーゼ ガトーキングダム サッポロ
    • Year and Date
      2015-09-15
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] 卵子形成過程および初期胚発生において細胞質に存在するUhrf1の重要性2015

    • Author(s)
      前之原 章司, 鵜木 元香, 小倉 淳郎, 井上 貴美子, 山縣 一夫, 堀 真由子, Jafar Sharif, 古関 明彦, 藤 英博, 大石 裕晃, 植田 幸嗣, 佐々木 裕之
    • Organizer
      第9回エピジェネティクス研究会
    • Place of Presentation
      学術総合センター 一橋講堂
    • Year and Date
      2015-05-25
    • Data Source
      KAKENHI-PROJECT-15K06803
  • [Presentation] Protracted binding of NP95 to hemimethylated DNA disrupts SETDB1-mediated proviral silencing

    • Author(s)
      Jafar Sharif
    • Organizer
      Keystone Symposia (Epigenetics Z3, 2015)
    • Place of Presentation
      Keystone, Colorado, USA
    • Year and Date
      2015-03-30 – 2015-04-03
    • Data Source
      KAKENHI-PROJECT-26870847
  • 1.  UNOKI Motoko (30525374)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 10 results
  • 2.  OGURA Atsuo (20194524)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 6 results
  • 3.  YAMAGATA Kazuo (10361312)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 6 results
  • 4.  ARITA Kyohei (40549648)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 5.  UEDA Koji (10509110)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 6 results
  • 6.  MAENOHARA Shoji
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 10 results
  • 7.  佐々木 裕之
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

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