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Yamada Makoto  山田 誠

ORCIDConnect your ORCID iD *help
Researcher Number 00581323
Other IDs
Affiliation (Current) 2025: 沖縄科学技術大学院大学, 機械学習とデータ科学ユニット, 准教授
Affiliation (based on the past Project Information) *help 2023 – 2024: 沖縄科学技術大学院大学, 機械学習とデータ科学ユニット, 准教授
2022: 京都大学, 化学研究所, 助教
2018 – 2022: 京都大学, 情報学研究科, 准教授
2017: 国立研究開発法人理化学研究所, 革新知能統合研究センター, ユニットリーダー
2016: 京都大学, 化学研究所, 助教
Review Section/Research Field
Principal Investigator
Basic Section 61030:Intelligent informatics-related / Sections That Are Subject to Joint Review: Basic Section60030:Statistical science-related , Basic Section61030:Intelligent informatics-related / Basic Section 60030:Statistical science-related / Intelligent informatics
Except Principal Investigator
Basic Section 58080:Gerontological nursing and community health nursing-related / Medium-sized Section 60:Information science, computer engineering, and related fields / Statistical science
Keywords
Principal Investigator
特徴選択 / 機械学習 / 最適輸送 / 統計的推論 / 木構造最適輸送距離 / カーネル法 / 電子透かし / 選択的推論 / 非線形
Except Principal Investigator
臨床研究 … More / 個別化医療 / 機械学習 / 統計科学 / リアルワールドデータ / ケアプラン / 日常生活動作 / 居宅介護 / 小標本 / 予測解析 / 選択的推論 / 因果推論 / 統計数学 / 診断法開発 / 統計解析 / 臨床試験 / 薬剤反応性 / 社会医学 / データ解析 / 研究デザイン / 生物統計学 Less
  • Research Projects

    (6 results)
  • Research Products

    (43 results)
  • Co-Researchers

    (18 People)
  •  高次元大規模最適輸送基盤技術の研究開発Principal Investigator

    • Principal Investigator
      山田 誠
    • Project Period (FY)
      2024 – 2027
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 61030:Intelligent informatics-related
      Basic Section 60030:Statistical science-related
      Sections That Are Subject to Joint Review: Basic Section60030:Statistical science-related , Basic Section61030:Intelligent informatics-related
    • Research Institution
      Okinawa Institute of Science and Technology Graduate University
  •  日常生活動作の予測に基づく居宅介護ケアプランの最適化手法の確立

    • Principal Investigator
      伊藤 沙紀子
    • Project Period (FY)
      2022 – 2025
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 58080:Gerontological nursing and community health nursing-related
    • Research Institution
      Tokyo Medical and Dental University
  •  個別化医療の適応的臨床研究を支える統計・機械学習法に関する研究

    • Principal Investigator
      松井 茂之
    • Project Period (FY)
      2021 – 2024
    • Research Category
      Grant-in-Aid for Scientific Research (A)
    • Review Section
      Medium-sized Section 60:Information science, computer engineering, and related fields
    • Research Institution
      Nagoya University
  •  Research and development of nonlinear Selective Inference for high-dimensional and small number of samples dataPrincipal Investigator

    • Principal Investigator
      Yamada Makoto
    • Project Period (FY)
      2020 – 2023
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 61030:Intelligent informatics-related
    • Research Institution
      Okinawa Institute of Science and Technology Graduate University
      Kyoto University
  •  Developing Nonlinear Feature Selection Algorithm for Ultra High-Dimensional DataPrincipal Investigator

    • Principal Investigator
      Yamada Makoto
    • Project Period (FY)
      2016 – 2017
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Intelligent informatics
    • Research Institution
      Institute of Physical and Chemical Research
      Kyoto University
  •  Comprehensive research on statistical methodologies and their applications for development of personalized medicine

    • Principal Investigator
      Matsui Shigeyuki
    • Project Period (FY)
      2016 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research (S)
    • Research Field
      Statistical science
    • Research Institution
      Nagoya University

All 2023 2022 2021 2020 2019 2018 2017 2016

All Journal Article Presentation

  • [Journal Article] High-Dimensional Nonlinear Feature Selection with Hilbert-Schmidt Independence Criterion Lasso2023

    • Author(s)
      山田 誠, Poignard Benjamin, 山田 宏暁, Freidling Tobias
    • Journal Title

      Journal of the Japan Statistical Society, Japanese Issue

      Volume: 53 Issue: 1 Pages: 49-67

    • DOI

      10.11329/jjssj.53.49

    • ISSN
      0389-5602, 2189-1478
    • Year and Date
      2023-09-07
    • Language
      Japanese
    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04874, KAKENHI-PROJECT-20H04243
  • [Journal Article] Robust Graph Dictionary Learning2023

    • Author(s)
      Weijie Liu, Jiahao Xie, Chao Zhang, Makoto Yamada, Nenggan Zheng, Hui Qian
    • Journal Title

      International Conference on Learning Representations

      Volume: n/a

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] A linear time approximation of Wasserstein distance with word embedding selection2023

    • Author(s)
      Sho Otao, Makoto Yamada
    • Journal Title

      Proceedings of the 2023 Conference on Empirical Methods in Natural Language Processing

      Volume: - Pages: 15121-15134

    • DOI

      10.18653/v1/2023.emnlp-main.935

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21H04874
  • [Journal Article] Large-scale similarity search with Optimal Transport2023

    • Author(s)
      Clea Laouar, Yuki Takezawa, Makoto Yamada
    • Journal Title

      Empirical Methods in Natural Language Processing (EMNLP)

      Volume: n/a Pages: 11920-11930

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Nystrom Method for Accurate and Scalable Implicit Differentiation2023

    • Author(s)
      Ryuichiro Hataya, Makoto Yamada
    • Journal Title

      International Conference on Artificial Intelligence and Statistics

      Volume: 206 Pages: 4643-4654

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Fixed Support Tree-Sliced Wasserstein Barycenter2022

    • Author(s)
      Yuki Takezawa, Ryoma Sato, Zornitsa Kozareva, Sujith Ravi, Makoto Yamada
    • Journal Title

      International Conference on Artificial Intelligence and Statistics (AISTATS)

      Volume: -

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Feature Screening with Kernel Knockoff2022

    • Author(s)
      Benjamin Poignard, Peter Naylor, Hector Climente, Makoto Yamada
    • Journal Title

      International Conference on Artificial Intelligence and Statistics (AISTATS)

      Volume: -

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Approximating 1-Wasserstein Distance with Trees.2022

    • Author(s)
      Makoto Yamada, Yuki Takezawa, Ryoma Sato, Han Bao, Zornitsa Kozareva, Sujith Ravi
    • Journal Title

      Transactions on Machine Learning Research

      Volume: 0 Pages: 0-0

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Post-selection inference with HSIC-Lasso2021

    • Author(s)
      Tobias Freidling, Benjamin Poignard, Hector Climente-Gonzalez, Makoto Yamada
    • Journal Title

      International Conference on Machine Learning (ICML)

      Volume: - Pages: 3439-3448

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Flow-based Alignment Approaches for Probability Measures in Different Spaces2021

    • Author(s)
      Tam Le, Nhat Ho, Makoto Yamada
    • Journal Title

      International Conference on Artificial Intelligence and Statistics (AISTATS)

      Volume: - Pages: 3934-3942

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Supervised Tree-Wasserstein Distance2021

    • Author(s)
      Yuki Takezawa, Ryoma Sato, Makoto Yamada
    • Journal Title

      International Conference on Machine Learning (ICML)

      Volume: - Pages: 10086-10095

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] LSMI-Sinkhorn: Semi-supervised Mutual Information Estimation with Optimal Transport2021

    • Author(s)
      Yanbin Liu, Makoto Yamada, Yao-Hung Hubert Tsai, Tam Le, Ruslan Salakhutdinov, Yi Yang
    • Journal Title

      European Conference on Machine Learning (ECML)

      Volume: - Pages: 655-670

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Random Features Strengthen Graph Neural Networks2021

    • Author(s)
      Ryoma Sato, Makoto Yamada, Hisashi Kashima
    • Journal Title

      SIAM data mining (SDM)

      Volume: - Pages: 333-341

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Dynamic Sasvi: Strong Safe Screening for Norm-Regularized Least Squares2021

    • Author(s)
      Hiroaki Yamada, Makoto Yamada
    • Journal Title

      NeurIPS

      Volume: -

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Journal Article] Block HSIC Lasso: model-free biomarker detection for ultra-high dimensional data2019

    • Author(s)
      Climente-Gonzlez Hctor、Azencott Chlo-Agathe、Kaski Samuel、Yamada Makoto
    • Journal Title

      Bioinformatics

      Volume: 35 Issue: 14 Pages: i427-i435

    • DOI

      10.1093/bioinformatics/btz333

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Journal Article] Robust sample-specific stability selection with effective reror control2019

    • Author(s)
      Park H, Yamada M, Imoto S, Miyano S
    • Journal Title

      J Comput Biol

      Volume: 26(3) Issue: 3 Pages: 202-217

    • DOI

      10.1089/cmb.2018.0180

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-15H05912, KAKENHI-PROJECT-16H06299
  • [Journal Article] Ultra High-Dimensional Nonlinear Feature Selection for Big Biological Data2018

    • Author(s)
      Yamada Makoto、Tang Jiliang、Lugo-Martinez Jose、Hodzic Ermin、Shrestha Raunak、Ouyang Hua、Radivojac Predrag、Sahinalp Cenk、Menczer Filippo、Chang Yi、Saha Avishek、Mamitsuka Hiroshi、Yin Dawei
    • Journal Title

      IEEE Transactions on Knowledge and Data Engineering

      Volume: n/a Issue: 7 Pages: 1-1

    • DOI

      10.1109/tkde.2018.2789451

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16114, KAKENHI-PROJECT-16H02868
  • [Journal Article] Lifecycle Modeling for Buzz Temporal Pattern Discovery2016

    • Author(s)
      Yi Chang, Makoto Yamada, Antonio Ortega
    • Journal Title

      ACM Transactions on Knowledge Discovery from Data (TKDD)

      Volume: 11 Issue: 2 Pages: 1-24

    • DOI

      10.1145/2994605

    • Peer Reviewed / Acknowledgement Compliant / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16114
  • [Presentation] Feature-Robust Optimal Transport for High-Dimensional Data.2022

    • Author(s)
      Mathis Petrovich, Chao Liang, Ryoma Sato, Yanbin Liu, Yao-Hung Hubert Tsai, Linchao Zhu, Yi Yang, Ruslan Salakhutdinov, Makoto Yamada
    • Organizer
      ECML 2022
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Presentation] Fixed Support Tree-Sliced Wasserstein Barycenter2022

    • Author(s)
      Yuki Takezawa, Ryoma Sato, Zornitsa Kozareva, Sujith Ravi, Makoto Yamada
    • Organizer
      AISTATS 2022
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Presentation] Feature screening with kernel knockoffs2022

    • Author(s)
      Benjamin Poignard, Peter J. Naylor, Hector Climente-Gonzalez, Makoto Yamada
    • Organizer
      AISTATS 2022
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Presentation] Feature screening with kernel knockoffs2022

    • Author(s)
      Benjamin Poignard Peter J Naylor, Hector Climente Gonzarez, Makoto Yamada.
    • Organizer
      AISTATS2022
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04874
  • [Presentation] Re-evaluating Word Mover’s Distance2022

    • Author(s)
      Ryoma Sato, Makoto Yamada, Hisashi Kashima
    • Organizer
      ICML 2022
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20H04243
  • [Presentation] Post-selection inference with HSIC-Lasso2021

    • Author(s)
      Tobias Freidling, Benjamin Poignard, Hector Climente-Gonzalez, Makoto Yamada.
    • Organizer
      ICML 2021
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04874
  • [Presentation] Adversarial regression with doubly non-negative weighting matrices2021

    • Author(s)
      Tam Le Truyen Nguyen, Makoto Yamada, Jose Blanchet, Viet Anh Nguyen
    • Organizer
      NeurIPS2021
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04874
  • [Presentation] Strong safe screening for norm-regularized least squares2021

    • Author(s)
      Hiroaki Yamada, Makoto Yamada. Dynamic Sasvi
    • Organizer
      NeurIPS 2021
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04874
  • [Presentation] LSMI-SInkhorn: Semi-supervised mutual information estimation with optimal transport2021

    • Author(s)
      Yanbin Liu, Makoto Yamada, Yao-Hung Hubert Tsai, Tam Le, Ruslan Salakhutdinov, Yi Yang
    • Organizer
      ECML2021
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21H04874
  • [Presentation] Sparse Hilbert-Schmidt independence criterion regression2020

    • Author(s)
      Benjamin Poignard, Makoto Yamada
    • Organizer
      AISTAT2020 International Conference on Artificial Intelligence and Statistics
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] More powerful selective kernel tests for feature selection2020

    • Author(s)
      Jen Ning Lim, Makoto Yamada, Wittawat Jitkrittum, Yoshikazu Terada, Shigeyuki Matsui, Hidetoshi Shimodaira
    • Organizer
      AISTAT2020 International Conference on Artificial Intelligence and Statistics
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] Unsupervised nonlinear feature selection from high-dimensional signed networks2020

    • Author(s)
      Qiang Huang, Tingyu Xia, Huiyan Sun, Makoto Yamada, Y. Chang
    • Organizer
      34th AAAI Conference on Artificial Intelligence
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] Topological Bayesian optimization with persistence diagrams2020

    • Author(s)
      Tatsuya Shiraishi, Tam Le, Hisashi Kashima, Makoto Yamada
    • Organizer
      ECAI 2020 24th European Conference on Artificial Intelligence
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] Unsupervised Nonlinear Feature Selection from High-dimensional Signed Networks.2020

    • Author(s)
      Qiang Huang, Tingyu Xia, Huiyan Sun, Makoto Yamada, Y. Chang
    • Organizer
      34th AAAI Conference on Artificial Intelligence (AAAI)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] Learning to Sample Hard Instances for Graph Algorithms.2019

    • Author(s)
      Ryoma Sato, Makoto Yamada, Hisashi Kashima
    • Organizer
      ACML 2019
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] Post Selection Inference with Incomplete Maximum Mean Discrepancy Estimator.2019

    • Author(s)
      Makoto Yamada, Denny Wu, Yao-Hung Hubert Tsai, Hirofumi Ohta, Ruslan Salakhutdinov, Ichiro Takeuchi, Kenji Fukumizu
    • Organizer
      ICLR 2019
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] Approximation Ratios of Graph Neural Networks for Combinatorial Problems2019

    • Author(s)
      Ryoma Sato, Makoto Yamada, Hisashi Kashima
    • Organizer
      NeurIPS 2019
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] Kernel Stein Tests for Multiple Model Comparison.2019

    • Author(s)
      Jen Ning Lim, Makoto Yamada, Bernhard Schölkopf, Wittawat Jitkrittum
    • Organizer
      NeurIPS 2019
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] Factorization Machinesを用いたCoxハザードモデル.2019

    • Author(s)
      佐竹 哉太, 山田 誠, 松井 孝太, 松井 茂之, 鹿島 久嗣
    • Organizer
      2019年度人工知能学会全国大会(第33回).
    • Data Source
      KAKENHI-PROJECT-16H06299
  • [Presentation] Convex Factorization Machine for Toxicogenomics Prediction2017

    • Author(s)
      Yamada Makoto、Lian Wenzhao、Goyal Amit、Chen Jianhui、Wimalawarne Kishan、Khan Suleiman A.、Kaski Samuel、Mamitsuka Hiroshi、Chang Yi
    • Organizer
      Proceedings of the 23rd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16114
  • [Presentation] Localized Lasso for High-Dimensional Regression2017

    • Author(s)
      Yamada Makoto、Takeuchi Koh、Iwata Tomoharu、Taylor John-Shawe、Kaski Samuel
    • Organizer
      AISTATS 2017
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16114
  • [Presentation] Which Tumblr Post Should I read Next?2016

    • Author(s)
      Zornitsa Kozareva, Makoto Yamada
    • Organizer
      the annual meeting of the Association for Computational Linguistics (ACL)
    • Place of Presentation
      Berlin Germany
    • Year and Date
      2016-08-07
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16114
  • [Presentation] A Robust Convex Formulation for Ensemble Clustering2016

    • Author(s)
      Junning Gao, Makoto Yamada, Samuel Kaski, Hiroshi Mamitsuka, Shanfeng Zhu
    • Organizer
      The Twenty-Fifth International Joint Conference on Artificial Intelligence (IJCAI-16)
    • Place of Presentation
      New York USA
    • Year and Date
      2016-07-09
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16114
  • [Presentation] Multi-view Anomaly Detection via Robust Probabilistic Latent Variable Models2016

    • Author(s)
      Tomoharu Iwata, Makoto Yamada
    • Organizer
      Neural Information Processing Systems (NIPS 2016)
    • Place of Presentation
      Barcelona Spain
    • Year and Date
      2016-12-05
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16114
  • [Presentation] Timeline Summarization from Social Media with Life Cycle Models2016

    • Author(s)
      Yi Chang, Jiliang Tang, Dawei Yin, Makoto Yamada, Yan Liu
    • Organizer
      The Twenty-Fifth International Joint Conference on Artificial Intelligence (IJCAI-16)
    • Place of Presentation
      New York USA
    • Year and Date
      2016-07-09
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K16114
  • 1.  Matsui Shigeyuki (80305854)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 2 results
  • 2.  角田 達彦 (10273468)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 3.  山下 智志 (50244108)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 4.  服部 聡 (50425154)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 5.  下平 英寿 (00290867)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 6.  POIGNARD BENJAMIN (40845252)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 3 results
  • 7.  星野 崇宏 (20390586)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 8.  三分一 史和 (30360647)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 9.  小森 理 (60586379)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 10.  包 含 (20831340)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 11.  伊藤 沙紀子 (80734152)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 12.  土屋 瑠見子 (20726525)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 13.  尾形 宗士郎 (00805012)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 14.  福井 小紀子 (40336532)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 15.  石山 麗子 (80826454)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 16.  井元 清哉
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 17.  PARK HEEWON
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 18.  宮野 悟
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

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