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Jung Jaewoon  鄭 載運

ORCIDConnect your ORCID iD *help
Researcher Number 10554701
Other IDs
Affiliation (Current) 2025: 国立研究開発法人理化学研究所, 開拓研究所, 専任技師
Affiliation (based on the past Project Information) *help 2021 – 2024: 国立研究開発法人理化学研究所, 開拓研究本部, 専任技師
Review Section/Research Field
Except Principal Investigator
Transformative Research Areas, Section (III)
Keywords
Except Principal Investigator
長鎖ノンコーディングRNA / Hero蛋白質 / 液液相分離 / 天然変性蛋白質 / 分子動力学シミュレーション
  • Research Projects

    (1 results)
  • Research Products

    (10 results)
  • Co-Researchers

    (3 People)
  •  非ドメイン型バイオポリマーの分子動力学計算

    • Principal Investigator
      依田 隆夫
    • Project Period (FY)
      2021 – 2025
    • Research Category
      Grant-in-Aid for Transformative Research Areas (A)
    • Review Section
      Transformative Research Areas, Section (III)
    • Research Institution
      Nagahama Institute of Bio-Science and Technology

All 2024 2023 2022

All Journal Article Presentation

  • [Journal Article] GENESIS CGDYN: large-scale coarse-grained MD simulation with dynamic load balancing for heterogeneous biomolecular systems2024

    • Author(s)
      Jung Jaewoon、Tan Cheng、Sugita Yuji
    • Journal Title

      Nature Communications

      Volume: 15 Issue: 1 Pages: 3370-3370

    • DOI

      10.1038/s41467-024-47654-1

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-21H05249, KAKENHI-PLANNED-21H05282, KAKENHI-PROJECT-19H05645
  • [Journal Article] Acceleration of generalized replica exchange with solute tempering simulations of large biological systems on massively parallel supercomputer2023

    • Author(s)
      Jung Jaewoon、Kobayashi Chigusa、Sugita Yuji
    • Journal Title

      Journal of Computational Chemistry

      Volume: - Issue: 20 Pages: 1740-1749

    • DOI

      10.1002/jcc.27124

    • Peer Reviewed
    • Data Source
      KAKENHI-PLANNED-21H05282, KAKENHI-PLANNED-21H05249, KAKENHI-PROJECT-19H05645
  • [Journal Article] Implementation of residue-level coarse-grained models I GENESIS for large-scale molecular dynamics simulations2022

    • Author(s)
      Cheng Tan, Jaewoon Jung, Chigusa Kobayashi, Diego Ugarte, Shoji Takada, Yuji Sugita
    • Journal Title

      PLoS Comp. Biol.

      Volume: 18 Issue: 4 Pages: e1009578-e1009578

    • DOI

      10.1371/journal.pcbi.1009578

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-21H05249, KAKENHI-PLANNED-21H05282, KAKENHI-PROJECT-19H05645
  • [Journal Article] Use of multistate Bennett acceptance ratio method for free-energy calculations from enhanced sampling and free-energy perturbation2022

    • Author(s)
      Matsunaga Yasuhiro、Kamiya Motoshi、Oshima Hiraku、Jung Jaewoon、Ito Shingo、Sugita Yuji
    • Journal Title

      Biophysical Reviews

      Volume: 14 Issue: 6 Pages: 1503-1512

    • DOI

      10.1007/s12551-022-01030-9

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PLANNED-21H05282, KAKENHI-PROJECT-19H05645, KAKENHI-PROJECT-20K21380
  • [Presentation] 人工設計ペプチドイオンチャネルの構造ダイナミクス2023

    • Author(s)
      新津藍, Jaewoon Jung, 杉田有治
    • Organizer
      第23回日本蛋白質科学会年会
    • Invited
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Acceleration of residue-level coarse-grained molecular dynamics by efficient parallelization2023

    • Author(s)
      J. Jung, C. Tan, C. Kobayashi, D. Ugarte, Y. Sugita
    • Organizer
      The 67th Biophysical Society Annual Meeting
    • Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Development of GENESIS on Fugaku for Large-Scale MD Simulations2023

    • Author(s)
      Jaewoon Jung, Yuji Sugita
    • Organizer
      Workshop of Multi-scale Molecular Dynamics Simulation and Machine Learning of Biomolecular Systems
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Development of GENESIS for large-scale molecular dynamics2023

    • Author(s)
      Jaewoon Jung, Yuji Sugita
    • Organizer
      CJK-WTCC VI
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Acceleration of gREST simulations of large biological systems on massively parallel computers2022

    • Author(s)
      J. Jung, C. Kobayashi, S. Sugita
    • Organizer
      第36回分子シミュレーション討論会
    • Data Source
      KAKENHI-PLANNED-21H05282
  • [Presentation] Acceleration of residue-level coarse-grained molecular dynamics by new development of parallelization2022

    • Author(s)
      J. Jung, C. Tan, C. Kobayashi, D. Ugarte, Y. Sugita
    • Organizer
      第60回日本生物物理学会年会
    • Data Source
      KAKENHI-PLANNED-21H05282
  • 1.  依田 隆夫 (50367900)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 2.  譚 丞 (20865886)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 2 results
  • 3.  杉田 有治
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 2 results

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