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Yagi Sota  八木 創太

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八木 創太  ヤギ ソウタ

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Researcher Number 10779820
Other IDs
Affiliation (Current) 2025: 早稲田大学, 人間科学学術院, 講師(任期付)
2025: 東京薬科大学, 生命科学部, 研究員
Affiliation (based on the past Project Information) *help 2023 – 2024: 早稲田大学, 人間科学学術院, 講師(任期付)
2020 – 2022: 国立研究開発法人理化学研究所, 生命機能科学研究センター, 基礎科学特別研究員
2018: 国立研究開発法人理化学研究所, 生命機能科学研究センター, 研究員
Review Section/Research Field
Principal Investigator
Basic Section 17050:Biogeosciences-related / Basic Section 45020:Evolutionary biology-related
Except Principal Investigator
Biofunction/Bioprocess
Keywords
Principal Investigator
分子進化 / 生命の起源 / タンパク質 / タンパク質のフォールディング / フォールディング / タンパク質進化 / 構造生物学 / RNAポリメラーゼ
Except Principal Investigator
自己組織化 / 生体材料 … More / 生体機能利用 / 蛋白質 / 人工繊維 / 電子顕微鏡 / 原子間力顕微鏡 / アミノ酸置換 / タンパク質間相互作用 / 触媒繊維 / 金属含有繊維 / 人工タンパク質繊維 Less
  • Research Projects

    (3 results)
  • Research Products

    (27 results)
  • Co-Researchers

    (2 People)
  •  古代の不正確な翻訳系で正確なタンパク質構造を創るPrincipal Investigator

    • Principal Investigator
      八木 創太
    • Project Period (FY)
      2024 – 2027
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 17050:Biogeosciences-related
    • Research Institution
      Waseda University
  •  Protein evolution from simple peptide to versatile protein foldPrincipal Investigator

    • Principal Investigator
      Yagi Sota
    • Project Period (FY)
      2020 – 2023
    • Research Category
      Grant-in-Aid for Early-Career Scientists
    • Review Section
      Basic Section 45020:Evolutionary biology-related
    • Research Institution
      Waseda University
      Institute of Physical and Chemical Research
  •  Establishment of an innovative technology to develop artificial protein fibers

    • Principal Investigator
      Akanuma Satoshi
    • Project Period (FY)
      2016 – 2018
    • Research Category
      Grant-in-Aid for Challenging Exploratory Research
    • Research Field
      Biofunction/Bioprocess
    • Research Institution
      Waseda University

All 2024 2023 2022 2021 2019 2018 2017 2016

All Journal Article Presentation

  • [Journal Article] Missing-link fold reveals the evolutionary pathway between RNA polymerase and ribosomal proteins2023

    • Author(s)
      Sota Yagi and Shunsuke Tagami
    • Journal Title

      bioRxiv

      Volume: -

    • DOI

      10.1101/2023.07.05.547881

    • Open Access
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Journal Article] Reconstruction of the ancient beta-barrel with seven amino acid types2022

    • Author(s)
      八木創太、田上俊輔
    • Journal Title

      Viva Origino

      Volume: 50 Issue: 1 Pages: 1

    • DOI

      10.50968/vivaorigino.50_1

    • ISSN
      0910-4003, 1346-6933
    • Language
      Japanese
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Journal Article] Seven amino acid types suffice to reconstruct the core fold of RNA polymerase2021

    • Author(s)
      Yagi Sota、Padhi Aditya K.、Vucinic Jelena、Barbe Sophie、Schiex Thomas、Nakagawa Reiko、Simoncini David、Zhang Kam Y. J.、Tagami Shunsuke
    • Journal Title

      Biorxiv

      Volume: -

    • DOI

      10.1101/2021.02.22.432383

    • Open Access
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Journal Article] Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase2021

    • Author(s)
      Sota Yagi, Aditya K. Padhi, Jelena Vucinic, Sophie Barbe, Thomas Schiex, Reiko Nakagawa, David Simoncini*, Kam Y. J. Zhang*, and Shunsuke Tagami*
    • Journal Title

      Journal of the American Chemical Society

      Volume: 143 Issue: 39 Pages: 15998-16006

    • DOI

      10.1021/jacs.1c05367

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18H01328, KAKENHI-PROJECT-20K15854
  • [Journal Article] Selection of a platinum-binding sequence in a loop of a four-helix bundle protein2018

    • Author(s)
      Yagi Sota、Akanuma Satoshi、Kaji Asumi、Niiro Hiroya、Akiyama Hayato、Uchida Tatsuya、Yamagishi Akihiko
    • Journal Title

      J. Biosci. Bioeng.

      Volume: 125 Issue: 2 Pages: 192-198

    • DOI

      10.1016/j.jbiosc.2017.09.006

    • NAID

      40021471223

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Journal Article] Creation of artificial protein-protein interactions using α-helices as interfaces2017

    • Author(s)
      Yagi Sota、Akanuma Satoshi、Yamagishi Akihiko
    • Journal Title

      Biophys. Rev.

      Volume: - Issue: 2 Pages: 411-420

    • DOI

      10.1007/s12551-017-0352-9

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] Experimental reconstruction of the evolutionary pathway bridging central dogma machinery via a missing-link fold2024

    • Author(s)
      Sota Yagi and Shunsuke Tagami
    • Organizer
      Joint CO world & 12th ELSI Symposium “EMERGENCE AND DETECTION OF LIFE”
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] Experimental reconstruction of the evolutionary pathway between ancient beta‐barrel proteins2023

    • Author(s)
      Sota Yagi and Shunsuke Tagami
    • Organizer
      日本進化学会第25回沖縄大会
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] Experimental reconstruction of the evolutionary pathway between ancient four b-barrels through a missing-link fold2023

    • Author(s)
      八木創太、田上俊輔
    • Organizer
      第47回 生命の起源および進化学会学術講演会
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] Reconstruction of ancient protein folds in the central dogma machinery2023

    • Author(s)
      Sota Yagi and Shunsuke Tagami
    • Organizer
      Library Design for Protein Engineering 2023
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] Reconstruction of the evolution of the ancient b-barrels with a limited amino acid types2022

    • Author(s)
      八木創太、田上俊輔
    • Organizer
      第45回日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] RNAポリメラーゼの進化的起源2022

    • Author(s)
      八木創太、田上俊輔
    • Organizer
      第24回日本進化学会
    • Invited
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] 古代βバレルタンパク質のメタモルフォーゼ2022

    • Author(s)
      八木創太、田上俊輔
    • Organizer
      第46回 生命の起原および進化学会学術講演会
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] 7種類のアミノ酸だけで古代βバレルを創る2021

    • Author(s)
      八木創太
    • Organizer
      生命の起原および進化に関するシンポジウム
    • Invited
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] 単純なペプチドから RNA ポリメラーゼコアドメインへの進化過程の実験的再現2021

    • Author(s)
      八木 創太,、田上 俊輔
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] Evolution of the core fold in RNA polymerase from ancient simple peptide2021

    • Author(s)
      Sota Yagi
    • Organizer
      RIKEN BDR symposium 2021
    • Data Source
      KAKENHI-PROJECT-20K15854
  • [Presentation] 新規人工タンパク質繊維の開発2019

    • Author(s)
      八木創太
    • Organizer
      アストロバイオロジーセンター・サテライト研究シンポジウム「深海底から宇宙へ、過去から未来へ、分子から社会へ」
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] 人工タンパク質間相互作用の開発と新規人工タンパク質繊維の創出2018

    • Author(s)
      八木創太、赤沼哲史、山岸明彦
    • Organizer
      東京薬科大学生命科学部創立25周年記念シンポジウム
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] 人工設計タンパク質間結合面の移植による新規タンパク質間相互作用の創出2017

    • Author(s)
      八木創太、赤沼哲史、内田達也、山岸明彦
    • Organizer
      第55回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] Testing the universality of an artificial protein-protein interface designed on an alpha-helix2017

    • Author(s)
      八木創太、赤沼哲史、山岸明彦
    • Organizer
      生命科学系学会合同年次大会(ConBio2017)
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] 簡便なタンパク質間相互作用設計法を利用した非アミロイド型タンパク質線維の構築2016

    • Author(s)
      八木創太、赤沼哲史、山岸明彦
    • Organizer
      第16回日本蛋白質科学会年会
    • Place of Presentation
      福岡
    • Year and Date
      2016-06-07
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] Creation of an artificial protein fiber by an easy-to-use designing of a protein-protein interaction2016

    • Author(s)
      Yagi S, Akanuma S, Uchida T, Yamagishi A
    • Organizer
      The 30th Annual Symposium of Protein Society
    • Place of Presentation
      Baltimore
    • Year and Date
      2016-07-16
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] 4ヘリックスバンドルタンパク質上への金属およびタンパク質間結合面の設計2016

    • Author(s)
      (1)八木創太、梶亜純、新納寛也、内田達也、赤沼哲史、山岸明彦
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2016-11-30
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] 新規タンパク質分子間結合面の創成と人工タンパク質繊維の作成2016

    • Author(s)
      八木創太、赤沼哲史、山岸明彦
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば
    • Year and Date
      2016-11-25
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] Construction of a co-assembled protein fiber composed of the protein derived from Sulfolobus tokodaii and the artificial thermostable protein2016

    • Author(s)
      Yagi S, Akanuma S, Uchida T, Yamagishi A
    • Organizer
      Extremophiles2016
    • Place of Presentation
      京都
    • Year and Date
      2016-09-12
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] バイオナノテクノロジー: タンパク質-タンパク質結合とタンパク質-金属結合の創成2016

    • Author(s)
      八木創太、梶亜純、赤沼哲史、内田達也、山岸明彦
    • Organizer
      第5回医薬工3大学包括連携推進シンポジウム
    • Place of Presentation
      東京
    • Data Source
      KAKENHI-PROJECT-16K14494
  • [Presentation] 白金結合アミノ酸配列の創出と解析2016

    • Author(s)
      八木創太、梶亜純、新納寛也、内田達也、赤沼哲史、山岸明彦
    • Organizer
      第89回生化学会大会
    • Place of Presentation
      仙台
    • Year and Date
      2016-09-25
    • Data Source
      KAKENHI-PROJECT-16K14494
  • 1.  Akanuma Satoshi (10321720)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 12 results
  • 2.  田上 俊輔
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

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