Tabei Yasuo 田部井靖生

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TABEI Yasuo 田部井靖生

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Researcher Number	20589824
Other IDs
Affiliation (Current)	2025: 国立研究開発法人理化学研究所, 革新知能統合研究センター, チームディレクター
Affiliation (based on the past Project Information) *help	2021 – 2024: 国立研究開発法人理化学研究所, 革新知能統合研究センター, ユニットリーダー 2017 – 2019: 国立研究開発法人理化学研究所, 革新知能統合研究センター, ユニットリーダー 2017: 東京工業大学, 情報理工学院, 研究員 2017: 理化学研究所, 革新知能統合研究センター, ユニットリーダー 2016: 東京工業大学, その他部局等, 研究員 2014 – 2015: 東京工業大学, 情報理工学(系)研究科, 研究員 2012 – 2015: 東京工業大学, 情報理工学(系)研究科, 東工大特別研究員
Review Section/Research Field	Principal Investigator Intelligent informatics Except Principal Investigator Theory of informatics / Transformative Research Areas, Section (IV) / Intelligent informatics
Keywords	Principal Investigator 国際情報交換 / ビッグデータ / アルゴリズム / 類似度検索 / 簡潔データ構造 / ケモインフォマティクス / 類似検索 / 機械学習 / データマイニング Except Principal Investigator データ圧縮 … More / アルゴリズム理論 / 文字列データ処理 / 文字列組み合わせ論 / データ構造 / アルゴリズム / 生物集団 / 動物行動 / 数理モデル / 移動系列 / インタラクション / 動的システム / 機械学習 / 集団運動 / データマイニング / 知識発見 / 文字列アルゴリズム / ストリーム圧縮 / 特徴抽出 / パターン発見 / 文法圧縮 / 可逆圧縮 / FPGA / 圧縮伝送 / ストリームデータ / テキスト圧縮 / 文字列処理 / 文字列情報処理 / NP完全性 Less

Technologies for rule/learning-based analysis and intervention policy in hierarchical bio-navigation
- Principal Investigator
  
  藤井慶輔
- Project Period (FY)
  2021 – 2025
- Research Category
  
  Grant-in-Aid for Transformative Research Areas (A)
- Review Section
  
  Transformative Research Areas, Section (IV)
- Research Institution
  Nagoya University
Analysis of upper and lower bounds on string processing problems via advanced data structures
- Principal Investigator
  
  INENAGA SHUNSUKE
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Theory of informatics
- Research Institution
  Kyushu University
New developments in string processing based on combinatorics and advanced data structures
- Principal Investigator
  
  Inenaga Shunsuke
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Theory of informatics
- Research Institution
  Kyushu University
Knowledge discovery from compressed stream data
- Principal Investigator
  
  Sakamoto Hiroshi
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Intelligent informatics
- Research Institution
  Kyushu Institute of Technology
Scalable data mining for processing complex and large-scale dataPrincipal Investigator
- Principal Investigator
  
  Tabei Yasuo
- Project Period (FY)
  2012 – 2015
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Intelligent informatics
- Research Institution
  Tokyo Institute of Technology

All 2021 2016 2015 2014 2013 2012 Other

All Journal Article Presentation

[Journal Article] Frechet Kernels for Trajectory Data Analysis2021
- Author(s)
  Koh Takeuchi, Masaaki Imaizumi, Shunsuke Kanda, Keisuke Fujii, Masakazu Ishihata, Takuya Maekawa, Ken Yoda & Yasuo Tabei
- Journal Title
  
  In Proceedings of 29th ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems (ACM SIGSPATIAL 2021)
  
  Volume: - Pages: 221-224
- DOI
  10.1145/3474717.3483949
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-ORGANIZER-21H05293, KAKENHI-PROJECT-20H04075, KAKENHI-PROJECT-21K11780, KAKENHI-PLANNED-21H05300
[Journal Article] siEDM: An Efficient String Index and Search Algorithm for Edit Distance with Moves2016
- Author(s)
  Yoshimasa Takabatake, Kenta Nakashima, Tetsuji Kuboyama, Yasuo Tabei, Hiroshi Sakamoto
- Journal Title
  
  Algorithms
  
  Volume: 9(2) Issue: 2 Pages: 26-26
- DOI
  10.3390/a9020026
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-25240003, KAKENHI-PROJECT-16H02870, KAKENHI-PROJECT-15J05902, KAKENHI-PROJECT-26280088, KAKENHI-PROJECT-26540119
[Journal Article] Improved ESP-index: A Practical Self-index for Highly Repetitive Texts2014
- Author(s)
  Yoshimasa Takabatake, Yasuo Tabei, Hiroshi Sakamoto
- Journal Title
  
  SEA 2014
  
  Volume: SEA2014 Pages: 338-350
- DOI
  10.1007/978-3-319-07959-2_29
- ISBN
  9783319079585, 9783319079592
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25240003, KAKENHI-PROJECT-26280003, KAKENHI-PROJECT-26280088
[Journal Article] Online Pattern Matching for String Edit Distance with Moves2014
- Author(s)
  Yoshimasa Takabatake, Yasuo Tabei, Hiroshi Sakamoto
- Journal Title
  
  SPIRE 2014
  
  Volume: SPIRE2014 Pages: 203-214
- DOI
  10.1007/978-3-319-11918-2_20
- ISBN
  9783319119175, 9783319119182
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25240003, KAKENHI-PROJECT-26280003, KAKENHI-PROJECT-26280088
[Journal Article] Scalable prediction of compound-protein interactions using minwise hashing2013
- Author(s)
  Y.Tabei and Y.Yamanishi
- Journal Title
  
  BMC Systems Biology
  
  Volume: 7 Issue: Suppl 6 Pages: S3-S3
- DOI
  10.1186/1752-0509-7-s6-s3
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24700140, KAKENHI-PROJECT-25700029
[Journal Article] Succinct Multibit Tree: Compact Representation of Multibit Trees by Using Succinct Data Structures in Chemical Fingerprint Searches2012
- Author(s)
  Yasuo Tabei
- Journal Title
  
  Lecture Notes in Computer Science
  
  Volume: 7534 Pages: 201-213
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24700140
[Journal Article] Identification of chemogenomic features from drug-target interaction networks using interpretable classifiers2012
- Author(s)
  Yasuo Tabei, Edouard Pauwels, Veronique Stoven, Kazuhiro Takemoto, Yoshihiro Yamanishi
- Journal Title
  
  Bioinrmatics
  
  Volume: 28 Issue: 18 Pages: 487-494
- DOI
  10.1093/bioinformatics/bts412
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24700140
[Journal Article] Variable-Length Codes for Space-Efficient Grammar-Based Compression2012
- Author(s)
  Yoshimasa Takabatake, Yasuo Tabei, Hiroshi Sakamoto
- Journal Title
  
  Lecture Notes in Computer Science
  
  Volume: 7608 Pages: 398-410
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24700140
[Presentation] Online Self-Indexed Grammar Compression2015
- Author(s)
  Yoshimasa Takabatake, Yasuo Tabei, Hiroshi Sakamoto
- Organizer
  SPIRE 2015
- Place of Presentation
  London, UK
- Year and Date
  2015-09-01
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26280088
[Presentation] siEDM: 移動付き編集距離の為の効率的な索引2015
- Author(s)
  高畠嘉将, 中島健太, 田部井靖生, 坂本比呂志
- Organizer
  第98回SIG-FPAI研究会
- Place of Presentation
  和歌山市
- Year and Date
  2015-08-07
- Data Source
  KAKENHI-PROJECT-26280088
[Presentation] 文法圧縮を応用したハミング距離計算の高速化2014
- Author(s)
  前田幸司, 高畠嘉将, 田部井靖生, 坂本比呂志
- Organizer
  第95回 SIG-FPAI研究会
- Place of Presentation
  大阪大学産業科学研究所
- Year and Date
  2014-10-10
- Data Source
  KAKENHI-PROJECT-26280088
[Presentation] 文法圧縮を応用したハミング距離の短い文字列列挙アルゴリズム2014
- Author(s)
  前田幸司，高畠嘉将，田部井靖生，坂本比呂志
- Organizer
  第94回 SIG-FPAI研究会
- Place of Presentation
  根室市総合文化会館
- Year and Date
  2014-07-24
- Data Source
  KAKENHI-PROJECT-26280088
[Presentation] Succinct Interval-Splitting Tree for Scalable Similarity Search of Compound-Protein Pairs with Property Constraints2013
- Author(s)
  Y.Tabei, A.Kishimoto, M.Kotera, Y.Yamanishi
- Organizer
  19th ACM SIGKDD Conference on Knowledge Discovery and Data Mining (KDD2013)
- Place of Presentation
  シカゴ
- Data Source
  KAKENHI-PROJECT-24700140
[Presentation] Succinct Multibit Tree: Compact Representation of Multibit Trees by Using Succinct Data Structures in Chemical Fingerprint Searches2012
- Author(s)
  Yasuo Tabei
- Organizer
  12th Workshop on Algorithms in Bioinformatics (WABI)
- Place of Presentation
  Ljubljana, Slovenia
- Data Source
  KAKENHI-PROJECT-24700140
[Presentation] Variable-Length Codes for Space-Efficient Grammar-Based Compression2012
- Author(s)
  Yoshimasa Takabatake, Yasuo Tabei, Hiroshi Sakamoto
- Organizer
  19th International Symposium on String Processing and Information Retrieval (SPIRE)
- Place of Presentation
  Cartagena, Colombia
- Data Source
  KAKENHI-PROJECT-24700140
[Presentation] Identification of chemogenomic features from drug-target interaction networks using interpretable classifiers2012
- Author(s)
  Yasuo Tabei, Edouard Pauwels, Veronique Stoven, Kazuhiro Takemoto, Yoshihiro Yamanishi
- Organizer
  11th European Conference on Computational Biology (ECCB)
- Place of Presentation
  Basel, Switzerland
- Data Source
  KAKENHI-PROJECT-24700140
[Presentation] Improved ESP-index: a practical self-index for highly repetitive texts
- Author(s)
  Yoshimasa Takabatake, Yasuo Tabei, Hiroshi Sakamoto
- Organizer
  13th International Symposium on Experimental Algorithms (SEA 2014)
- Place of Presentation
  Copenhagen, Denmark
- Year and Date
  2014-06-29 – 2014-07-01
- Data Source
  KAKENHI-PROJECT-26280003
[Presentation] 文法圧縮に基づく自己索引のオンライン構築について
- Author(s)
  高畠嘉将，田部井靖生，坂本比呂志
- Organizer
  第96回 SIG-FPAI研究会
- Place of Presentation
  名古屋工業大学
- Year and Date
  2015-01-13 – 2015-01-14
- Data Source
  KAKENHI-PROJECT-26280088
[Presentation] 移動付き編集距離のオンラインパターンマッチング
- Author(s)
  高畠嘉将，田部井靖生，坂本比呂志
- Organizer
  第97回 SIG-FPAI研究会
- Place of Presentation
  別府国際コンベンションセンター
- Year and Date
  2015-03-22 – 2015-03-23
- Data Source
  KAKENHI-PROJECT-26280088
[Presentation] Online pattern matching for string edit distance with moves
- Author(s)
  Yoshimasa Takabatake, Yasuo Tabei, Hiroshi Sakamoto
- Organizer
  21st International Symposium on String Processing and Information Retrieval (SPIRE 2014)
- Place of Presentation
  Ouro Preto, Brazil
- Year and Date
  2014-10-20 – 2014-10-24
- Data Source
  KAKENHI-PROJECT-26280003

1. Inenaga Shunsuke (60448404)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
2. 坂内英夫 (20323644)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
3. Sakamoto Hiroshi (50315123)

# of Collaborated Projects: 1 results

# of Collaborated Products: 9 results
4. 山際伸一 (10574725)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 榎田修一 (40346862)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 藤井慶輔 (70747401)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
7. 村上久 (20755467)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. 西海望 (10760390)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. YODA Ken

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
10. 前川卓也

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
11. 井智弘

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results
12. 中島祐人

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Tabei Yasuo 田部井 靖生

TABEI Yasuo 田部 井靖生

Research Projects

Research Products

Co-Researchers

Technologies for rule/learning-based analysis and intervention policy in hierarchical bio-navigation

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Analysis of upper and lower bounds on string processing problems via advanced data structures

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

New developments in string processing based on combinatorics and advanced data structures

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Knowledge discovery from compressed stream data

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Scalable data mining for processing complex and large-scale dataPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] Frechet Kernels for Trajectory Data Analysis2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] siEDM: An Efficient String Index and Search Algorithm for Edit Distance with Moves2016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Improved ESP-index: A Practical Self-index for Highly Repetitive Texts2014

Author(s)

Journal Title

DOI

ISBN

Data Source

[Journal Article] Online Pattern Matching for String Edit Distance with Moves2014

Author(s)

Journal Title

DOI

ISBN

Data Source

[Journal Article] Scalable prediction of compound-protein interactions using minwise hashing2013

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Succinct Multibit Tree: Compact Representation of Multibit Trees by Using Succinct Data Structures in Chemical Fingerprint Searches2012

Author(s)

Journal Title

Data Source

[Journal Article] Identification of chemogenomic features from drug-target interaction networks using interpretable classifiers2012

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Variable-Length Codes for Space-Efficient Grammar-Based Compression2012

Author(s)

Journal Title

Data Source

[Presentation] Online Self-Indexed Grammar Compression2015

Author(s)

Organizer

Place of Presentation

Year and Date

Tabei Yasuo 田部井靖生

TABEI Yasuo 田部井靖生