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Taguchi Y-h.  田口 善弘

… Alternative Names

TAGUCHI Y-h.  田口 善弘

TAGUCHI Yoshihiro  田口 善弘

田口 善弘  タグチ ヨシヒロ

Less
Researcher Number 30206932
Other IDs
  • ORCIDhttps://orcid.org/0000-0003-0867-8986
Affiliation (Current) 2025: 中央大学, 理工学部, 教授
Affiliation (based on the past Project Information) *help 2017 – 2024: 中央大学, 理工学部, 教授
2011 – 2015: 中央大学, 理工学部, 教授
2006 – 2009: 中央大学, 理工学部, 教授
1997 – 2001: 中央大学, 理工学部, 助教授
1996: 東京工業大学, 理学部, 助手
1991 – 1993: 東京工業大学, 理学部, 助手
Review Section/Research Field
Principal Investigator
物性一般(含基礎論) / Biological Sciences / Basic Section 62010:Life, health and medical informatics-related / Life / Health / Medical informatics / Complex systems / Tumor diagnosis / Bioinformatics/Life informatics / Fluid engineering
Except Principal Investigator
Meteorology/Physical oceanography/Hydrology / Mathematical physics/Fundamental condensed matter physics
Keywords
Principal Investigator
テンソル分解 / 変数選択 / 教師なし学習 / インシリコ創薬 / 教師無し学習 / 前立腺がん / 腎臓がん / 心的外傷後ストレス障害 / ヒストン修飾 / マルチオミックスオミックス … More / マルチオミクス / 一細胞RNA-seq / 主成分分析 / マルチオミックスデータ / 一細胞計測 / 生体生命情報学 / 心臓病 / マルチビューデータ / 乳がん / 社会性昆虫 / AI創薬 / テンソル分解を用いた教師無し学習による変数選択 / エピジェネティクス / AI創薬 / バイオマーカー / マルチオミックス / 遺伝子発現プロファイル / 非小細胞肺がん / 自己免疫疾患 / 遺伝子発現解析 / 普遍疾患バイオマーカー / マイクロRNA / デング出血熱 / 非小細胞肺がんのエピジェネティック療法 / 心筋細胞の成熟プロセス遺伝子 / 出芽酵母の細胞分裂周期遺伝子 / mRNA-miRNA相互作用 / 世代間エピジェネティックス / 筋萎縮性側索硬化症 / 髄芽腫 / ES細胞 / miRNA / 小脳 / 橋 / 側頭葉 / 前頭葉 / 細胞老化 / プロモーターメチル化 / 精子形成 / gene expression / histone modificatiuon / promoter methylation / microRNA / DNA copy number variation / 細胞分裂周期 / 分裂酵母 / DNA copy number 異常 / 概日周期 / シアノバクテリア / プロテオミクス / DNA copy number異状 / Barcode of Life / マイクロアレイ / ゲノム科学 / 非計量多次元尺度構成法 / 剛体球 / 非弾性衝突球 / 振動層 / 数値計算 / 粉粒体 / 離散要素法 / コルモゴロフ則 / 乱流 / 粉体振動層 … More
Except Principal Investigator
Depth-hoar crystals / Ice spheres / 3D structures / 3D-Visualization / Snow pack / NMR imaging / しまり雪 / しもざらめ雪 / ざらめ雪 / 三次元構造 / MRI / 可視化 / 積雪 / 核磁気共鳴 / 市町村人口 / 細菌コロニー / 生物物理 / べき乗分布 / 結晶成長 / 細菌 / 対数正規分布 / 複雑系 / フラクタル / スケーリング / コロニー / バクテリア / パターン形成 / 1次転移 / スピングラス / 量子スピン系 / 古典スピン系 / 有限サイズスケ-リング / モンテカルロシミュレ-ション / 界面の方法 / 相転移 Less
  • Research Projects

    (15 results)
  • Research Products

    (264 results)
  • Co-Researchers

    (26 People)
  •  Principal component analysis and tensor decomposition based unsuper based feature extraction with the starndard deviation optimizationPrincipal Investigator

    • Principal Investigator
      田口 善弘
    • Project Period (FY)
      2024 – 2026
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 62010:Life, health and medical informatics-related
    • Research Institution
      Chuo University
  •  scRNA-seq analysis using PCA and TD based unsupervised feature extractionPrincipal Investigator

    • Principal Investigator
      Taguchi Y-h.
    • Project Period (FY)
      2020 – 2023
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 62010:Life, health and medical informatics-related
    • Research Institution
      Chuo University
  •  Transomics analysis with tensor decomposition based unsupervised feature extractionPrincipal Investigator

    • Principal Investigator
      田口 善弘
    • Project Period (FY)
      2020 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      Chuo University
  •  Application of tensor decomposition based unsupervised feature extraction to histone modification analysisPrincipal Investigator

    • Principal Investigator
      田口 善弘
    • Project Period (FY)
      2019 – 2020
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Biological Sciences
    • Research Institution
      Chuo University
  •  Tensor decomposition based unsupervised feature extraction applied to bioinformaticsPrincipal Investigator

    • Principal Investigator
      Taguchi Y-h.
    • Project Period (FY)
      2017 – 2019
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Life / Health / Medical informatics
    • Research Institution
      Chuo University
  •  変数選択安定性を重視した変数選択を用いたオミックス疾患バイオマーカー探索Principal Investigator

    • Principal Investigator
      田口 善弘
    • Project Period (FY)
      2014 – 2015
    • Research Category
      Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
    • Review Section
      Complex systems
    • Research Institution
      Chuo University
  •  Development of extensive analyses methods of tumor and cell differentiation related miRNA usingPrincipal Investigator

    • Principal Investigator
      TAGUCHI Y-h.
    • Project Period (FY)
      2011 – 2014
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Tumor diagnosis
    • Research Institution
      Chuo University
  •  Bioinformatics using non-metric multidimensional scaling methodPrincipal Investigator

    • Principal Investigator
      TAGUCHI Yoshihiro
    • Project Period (FY)
      2007 – 2008
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Bioinformatics/Life informatics
    • Research Institution
      Chuo University
  •  Formation Mechanism of Growing Random Patterns

    • Principal Investigator
      MATSUSHITA Mitsugu
    • Project Period (FY)
      2006 – 2009
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Research Field
      Mathematical physics/Fundamental condensed matter physics
    • Research Institution
      Chuo University
  •  NMR Imaging of 3-D Snowpack Structures

    • Principal Investigator
      NARITA Hideki, 尾関 俊浩
    • Project Period (FY)
      1999 – 2001
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Meteorology/Physical oceanography/Hydrology
    • Research Institution
      Hokkaido University
  •  粉粒体の動力学Principal Investigator

    • Principal Investigator
      田口 善弘
    • Project Period (FY)
      1997 – 1998
    • Research Category
      Grant-in-Aid for Encouragement of Young Scientists (A)
    • Research Field
      物性一般(含基礎論)
    • Research Institution
      Chuo University
  •  粉粒体の動力学Principal Investigator

    • Principal Investigator
      田口 善弘
    • Project Period (FY)
      1996
    • Research Category
      Grant-in-Aid for Encouragement of Young Scientists (A)
    • Research Field
      物性一般(含基礎論)
    • Research Institution
      Tokyo Institute of Technology
  •  粉体振動層の動的モデリングPrincipal Investigator

    • Principal Investigator
      田口 善弘
    • Project Period (FY)
      1993
    • Research Category
      Grant-in-Aid for Encouragement of Young Scientists (A)
    • Research Field
      物性一般(含基礎論)
    • Research Institution
      Tokyo Institute of Technology
  •  格子渦管モデルによる流体乱流シミュレーションPrincipal Investigator

    • Principal Investigator
      田口 善弘
    • Project Period (FY)
      1992
    • Research Category
      Grant-in-Aid for Encouragement of Young Scientists (A)
    • Research Field
      Fluid engineering
    • Research Institution
      Tokyo Institute of Technology
  •  相転移に対するモンテカルロ界面的方法の開発と応用

    • Principal Investigator
      上野 陽太郎
    • Project Period (FY)
      1991
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Research Institution
      Tokyo Institute of Technology

All 2024 2023 2022 2021 2020 2019 2018 2017 2016 2015 2014 2013 2012 2011 2009 2008 2007 Other

All Journal Article Presentation Book

  • [Book] はじめての機械学習 中学数学でわかるAIのエッセンス2024

    • Author(s)
      田口 善弘
    • Total Pages
      272
    • Publisher
      講談社
    • ISBN
      9784065239605
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Book] はじめての機械学習 中学数学でわかるAIのエッセンス2021

    • Author(s)
      田口 善弘
    • Total Pages
      224
    • Publisher
      講談社
    • ISBN
      9784065239605
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Book] 生命はデジタルでできている 情報から見た新しい生命像2020

    • Author(s)
      田口 善弘
    • Total Pages
      224
    • Publisher
      講談社
    • ISBN
      9784065195970
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Book] Regulatory microRNA2020

    • Author(s)
      田口 善弘 , 王 秀瑛
    • Total Pages
      348
    • Publisher
      MDPI
    • ISBN
      9783038977681
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Book] 生命はデジタルでできている 情報から見た新しい生命像2020

    • Author(s)
      田口 善弘
    • Total Pages
      224
    • Publisher
      講談社
    • ISBN
      4065195977
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Book] 生命はデジタルでできている 情報から見た新しい生命像2020

    • Author(s)
      田口 善弘
    • Total Pages
      224
    • Publisher
      講談社
    • ISBN
      4065195977
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Book] Regulatory microRNA2019

    • Author(s)
      Y-h. Taguchi, Hsiuying Wang
    • Total Pages
      348
    • Publisher
      MDPI
    • ISBN
      9783038977698
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Book] Unsupervised Feature Extraction Applied to Bioinformatics A PCA Based and TD Based Approach2019

    • Author(s)
      Y-h. Taguchi
    • Total Pages
      321
    • Publisher
      Springer International
    • ISBN
      9783030224554
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Book] Unsupervised Feature Extraction Applied to Bioinformatics: A PCA Based and TD Based Approach2019

    • Author(s)
      Y-h. Taguchi
    • Total Pages
      321
    • Publisher
      Springer International
    • ISBN
      9783030224554
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Book] 高校で教わりたかった物理2009

    • Author(s)
      田口善弘
    • Total Pages
      170
    • Publisher
      日本評論社
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Book] 文庫で読む科学2007

    • Author(s)
      田口善弘
    • Publisher
      岩波書店
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] A new machine learning based computational framework identifies therapeutic targets and unveils influential genes in pancreatic islet cells2023

    • Author(s)
      Turki Turki、Taguchi Y-h.
    • Journal Title

      Gene

      Volume: 853 Pages: 147038-147038

    • DOI

      10.1016/j.gene.2022.147038

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Principal component analysis- and tensor decomposition-based unsupervised feature extraction to select more suitable differentially methylated cytosines: Optimization of standard deviation versus state-of-the-art methods2023

    • Author(s)
      Taguchi Y.-H.、Turki Turki
    • Journal Title

      Genomics

      Volume: 115 Issue: 2 Pages: 110577-110577

    • DOI

      10.1016/j.ygeno.2023.110577

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Bioinformatic tools for epitranscriptomics2023

    • Author(s)
      Taguchi Y.-H.
    • Journal Title

      American Journal of Physiology-Cell Physiology

      Volume: 324 Issue: 2 Pages: C447-C457

    • DOI

      10.1152/ajpcell.00437.2022

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Tensor decomposition discriminates tissues using scATAC-seq2023

    • Author(s)
      Taguchi Y.-H.、Turki Turki
    • Journal Title

      Biochimica et Biophysica Acta (BBA) - General Subjects

      Volume: 1867 Issue: 6 Pages: 130360-130360

    • DOI

      10.1016/j.bbagen.2023.130360

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Application note: TDbasedUFE and TDbasedUFEadv: bioconductor packages to perform tensor decomposition based unsupervised feature extraction2023

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      Frontiers in Artificial Intelligence

      Volume: 6 Pages: 1-1

    • DOI

      10.3389/frai.2023.1237542

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Features extracted using tensor decomposition reflect the biological features of the temporal patterns of human blood multimodal metabolome2023

    • Author(s)
      Fujita Suguru、Karasawa Yasuaki、Hironaka Ken-ichi、Taguchi Y.-h.、Kuroda Shinya
    • Journal Title

      PLOS ONE

      Volume: 18 Issue: 2 Pages: e0281594-e0281594

    • DOI

      10.1371/journal.pone.0281594

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K16578, KAKENHI-PROJECT-18H03979, KAKENHI-PROJECT-21H04759, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300, KAKENHI-PROJECT-20K12067
  • [Journal Article] Optimized Tensor Decomposition and Principal Component Analysis Outperforming State-of-the-Art Methods When Analyzing Histone Modification Chromatin Immunoprecipitation Profiles2023

    • Author(s)
      Turki Turki、Roy Sanjiban Sekhar、Taguchi Y.-H.
    • Journal Title

      Algorithms

      Volume: 16 Issue: 9 Pages: 401-401

    • DOI

      10.3390/a16090401

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Characterization of circulating <scp>miRNAs</scp> in the treatment of primary liver tumors2023

    • Author(s)
      Umezu Tomohiro、Tanaka Shogo、Kubo Shoji、Enomoto Masaru、Tamori Akihiro、Ochiya Takahiro、Taguchi Y.‐H.、Kuroda Masahiko、Murakami Yoshiki
    • Journal Title

      Cancer Reports

      Volume: 7 Issue: 2 Pages: 1-9

    • DOI

      10.1002/cnr2.1964

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PROJECT-21K07133, KAKENHI-PROJECT-21H02706
  • [Journal Article] GENEvaRX: A novel AI-driven method and web tool can identify critical genes and effective drugs for Lichen Planus2023

    • Author(s)
      Turki Turki、Taguchi Y-h.
    • Journal Title

      Engineering Applications of Artificial Intelligence

      Volume: 124 Pages: 106607-106607

    • DOI

      10.1016/j.engappai.2023.106607

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Integrated Analysis of Gene Expression and Protein?Protein Interaction with Tensor Decomposition2023

    • Author(s)
      Taguchi Y-H.、Turki Turki
    • Journal Title

      Mathematics

      Volume: 11 Issue: 17 Pages: 3655-3655

    • DOI

      10.3390/math11173655

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Integrated analysis of human DNA methylation, gene expression, and genomic variation in iMETHYL database using kernel tensor decomposition-based unsupervised feature extraction2023

    • Author(s)
      Taguchi Y-h.、Komaki Shohei、Sutoh Yoichi、Ohmomo Hideki、Otsuka-Yamasaki Yayoi、Shimizu Atsushi
    • Journal Title

      PLOS ONE

      Volume: 18 Issue: 8 Pages: e0289029-e0289029

    • DOI

      10.1371/journal.pone.0289029

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Investigating Neuron Degeneration in Huntington’s Disease Using RNA-Seq Based Transcriptome Study2023

    • Author(s)
      Sneha Nela Pragathi、Dharshini S. Akila Parvathy、Taguchi Y.-h.、Gromiha M. Michael
    • Journal Title

      Genes

      Volume: 14 Issue: 9 Pages: 1801-1801

    • DOI

      10.3390/genes14091801

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Advanced Tensor Decomposition-Based Integrated Analysis of Protein-Protein Interaction with Cancer Gene Expression Can Improve Coincidence with Clinical Labels2023

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      11th International Conference on Bioinformatics and Computational Biology (ICBCB)

      Volume: 1 Pages: 1-2

    • DOI

      10.1109/icbcb57893.2023.10246633

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Integrative Meta-Analysis of Huntington’s Disease Transcriptome Landscape2023

    • Author(s)
      Sneha Nela Pragathi、Dharshini S. Akila Parvathy、Taguchi Y.-H.、Gromiha M. Michael
    • Journal Title

      Genes

      Volume: 13 Issue: 12 Pages: 2385-2385

    • DOI

      10.3390/genes13122385

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] RNA m6A modification and microRNAs2022

    • Author(s)
      Taguchi Y.-H.
    • Journal Title

      Handbook of Machine Learning Applications for Genomics

      Volume: 1 Pages: 169-180

    • DOI

      10.1016/b978-0-323-89774-7.00020-0

    • ISBN
      9780323897747
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Handbook of Machine Learning Applications for Genomics2022

    • Author(s)
      Taguchi Y.-H.
    • Journal Title

      Handbook of Machine Learning Applications for Genomics

      Volume: 1 Pages: 155-176

    • Peer Reviewed
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition2022

    • Author(s)
      Amakura Yuki、Taguchi Y-h.
    • Journal Title

      Genes

      Volume: 13 Issue: 10 Pages: 1698-1698

    • DOI

      10.3390/genes13101698

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Projection in genomic analysis: A theoretical basis to rationalize tensor decomposition and principal component analysis as feature selection tools2022

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      PLOS ONE

      Volume: 17 Issue: 9 Pages: e0275472-e0275472

    • DOI

      10.1371/journal.pone.0275472

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Novel feature selection method via kernel tensor decomposition for improved multi-omics data analysis2022

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      BMC Medical Genomics

      Volume: 15 Issue: 1 Pages: 37-37

    • DOI

      10.1186/s12920-022-01181-4

    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Handbook of Machine Learning Applications for Genomics2022

    • Author(s)
      Taguchi Y.-H.
    • Journal Title

      Handbook of Machine Learning Applications for Genomics

      Volume: 1 Pages: 155-176

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] A tensor decomposition-based integrated analysis applicable to multiple gene expression profiles without sample matching2022

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      Scientific Reports

      Volume: 12 Issue: 1 Pages: 21242-21242

    • DOI

      10.1038/s41598-022-25524-4

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] In Silico Drug Discovery Using Tensor Decomposition Based Unsupervised Feature Extraction2022

    • Author(s)
      Taguchi Y.-H.
    • Journal Title

      Handbook of Machine Learning Applications for Genomics

      Volume: 1 Pages: 101-120

    • DOI

      10.1007/978-981-16-9158-4_7

    • ISBN
      9789811691577, 9789811691584
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Integrated Analysis of Tissue-Specific Gene Expression in Diabetes by Tensor Decomposition Can Identify Possible Associated Diseases2022

    • Author(s)
      Taguchi Y-H.、Turki Turki
    • Journal Title

      Genes

      Volume: 13 Issue: 6 Pages: 1097-1097

    • DOI

      10.3390/genes13061097

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Sincle Cell RNA-seq Analysis Using Tensor Decomposition and Principal Component Analysis Based Unsupervised Feature Extraction2022

    • Author(s)
      Taguchi Y.-H.
    • Journal Title

      Handbook of Machine Learning Applications for Genomics

      Volume: 1 Pages: 155-176

    • DOI

      10.1007/978-981-16-9158-4_11

    • ISBN
      9789811691577, 9789811691584
    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Multiomics Data Analysis of Cancers Using Tensor Decomposition and Principal Component Analysis Based Unsupervised Feature Extraction2022

    • Author(s)
      Taguchi Y.-H.
    • Journal Title

      Handbook of Machine Learning Applications for Genomics

      Volume: 1 Pages: 1-17

    • DOI

      10.1007/978-981-16-9158-4_1

    • ISBN
      9789811691577, 9789811691584
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Suppression of intrahepatic cholangiocarcinoma cell growth by <scp>SKI</scp> via upregulation of the <scp>CDK</scp> inhibitor p212022

    • Author(s)
      Kawamura E、Matsubara T、Daikoku A、et al.
    • Journal Title

      FEBS Open Bio

      Volume: 12 Issue: 12 Pages: 2122-2135

    • DOI

      10.1002/2211-5463.13489

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-19K10604, KAKENHI-PROJECT-20K12067, KAKENHI-PROJECT-21K06757, KAKENHI-PROJECT-21K08690, KAKENHI-PROJECT-22K10491, KAKENHI-PROJECT-20K16226, KAKENHI-PROJECT-17K09467, KAKENHI-PROJECT-20K08996, KAKENHI-PUBLICLY-20H04848, KAKENHI-PROJECT-23K21359
  • [Journal Article] microRNA Bioinformatics2022

    • Author(s)
      Taguchi Y-h.
    • Journal Title

      Cells

      Volume: 11 Issue: 22 Pages: 3677-3677

    • DOI

      10.3390/cells11223677

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Adapted tensor decomposition and PCA based unsupervised feature extraction select more biologically reasonable differentially expressed genes than conventional methods2022

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      Scientific Reports

      Volume: 12 Issue: 1 Pages: 17438-17438

    • DOI

      10.1038/s41598-022-21474-z

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Identification of genes associated with altered gene expression and m6A profiles during hypoxia using tensor decomposition based unsupervised feature extraction2021

    • Author(s)
      Roy Sanjiban Sekhar、Taguchi Y.-H.
    • Journal Title

      Scientific Reports

      Volume: 11 Issue: 1 Pages: 8909-8909

    • DOI

      10.1038/s41598-021-87779-7

    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] カーネルテンソル分解を用いた教師なし学習による変数選択法 ~ バイオインフォマティクスへの応用 ~2021

    • Author(s)
      田口 善弘
    • Journal Title

      信学技法

      Volume: 120(395) Pages: 16-23

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Unsupervised tensor decomposition-based method to extract candidate transcription factors as histone modification bookmarks in post-mitotic transcriptional reactivation2021

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      PLOS ONE

      Volume: 16 Issue: 5 Pages: e0251032-e0251032

    • DOI

      10.1371/journal.pone.0251032

    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] PCA-based unsupervised feature extraction for gene expression analysis of COVID-19 patients2021

    • Author(s)
      Fujisawa Kota、Shimo Mamoru、Taguchi Y.-H.、Ikematsu Shinya、Miyata Ryota
    • Journal Title

      Scientific Reports

      Volume: 11 Issue: 1 Pages: 17351-17351

    • DOI

      10.1038/s41598-021-95698-w

    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Mathematical formulation and application of kernel tensor decomposition based unsupervised feature extraction2021

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      Knowledge-Based Systems

      Volume: 217 Pages: 106834-106834

    • DOI

      10.1016/j.knosys.2021.106834

    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Exploring Common Therapeutic Targets for Neurodegenerative Disorders Using Transcriptome Study2021

    • Author(s)
      Dharshini S. Akila Parvathy、Jemimah Sherlyn、Taguchi Y. H.、Gromiha M. Michael
    • Journal Title

      Frontiers in Genetics

      Volume: 12 Pages: 639160-639160

    • DOI

      10.3389/fgene.2021.639160

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Effects of Collagen?Glycosaminoglycan Mesh on Gene Expression as Determined by Using Principal Component Analysis-Based Unsupervised Feature Extraction2021

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      Polymers

      Volume: 13 Issue: 23 Pages: 4117-4117

    • DOI

      10.3390/polym13234117

    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Application of Tensor Decomposition to Gene Expression of Infection of Mouse Hepatitis Virus Can Identify Critical Human Genes and Efffective Drugs for SARS-CoV-2 Infection2021

    • Author(s)
      Taguchi Y-H.、Turki Turki
    • Journal Title

      IEEE Journal of Selected Topics in Signal Processing

      Volume: 15 Issue: 3 Pages: 746-758

    • DOI

      10.1109/jstsp.2021.3061251

    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] カーネルテンソル分解を用いた教師なし学習による変数選択法 ~ バイオインフォマティクスへの応用 ~2021

    • Author(s)
      田口 善弘
    • Journal Title

      情報処理学会研究報告

      Volume: 2021-BIO-65(2) Pages: 1-9

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Identification of Enhancers and Promoters in the Genome by Multidimensional Scaling2021

    • Author(s)
      Ishibashi Ryo、Taguchi Y-h.
    • Journal Title

      Genes

      Volume: 12 Issue: 11 Pages: 1671-1671

    • DOI

      10.3390/genes12111671

    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Journal Article] Development of a novel anti-hepatitis B virus agent via Sp12020

    • Author(s)
      Hayakawa Michiyo、Umeyama Hideaki、Iwadate Mitsuo、Taguchi Y.-H.、Yano Yoshihiko、Honda Takashi、Itami-Matsumoto Saori、Kozuka Ritsuzo、Enomoto Masaru、Tamori Akihiro、Kawada Norifumi、Murakami Yoshiki
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1 Pages: 47-47

    • DOI

      10.1038/s41598-019-56842-9

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Conjecturing human genes that are easy to be double strand breaks by tensor decomposition2020

    • Author(s)
      Nobuo Hosaka , Y-h. Taguchi
    • Journal Title

      情報処理学会研究報告

      Volume: 2020-BIO-62(2) Pages: 1-6

    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Identification of Transcription Factors, Biological Pathways, and Diseases as Mediated by N6-methyladenosine Using Tensor Decomposition-Based Unsupervised Feature Extraction2020

    • Author(s)
      Taguchi Y-h.、Dharshini S. Akila Parvathy、Gromiha M. Michael
    • Journal Title

      Applied Sciences

      Volume: 11 Issue: 1 Pages: 213-213

    • DOI

      10.3390/app11010213

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] テンソル分解に基づく教師なし学習による変数選択のRNAi 処理を行ったプラナリアのRNA-seq解析への適用2020

    • Author(s)
      田口善弘 , 鹿島誠
    • Journal Title

      情報処理学会研究報告

      Volume: 2020-BIO-62(1) Pages: 1-4

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] 機械学習による遺伝子情報の解析技術と 医薬品開発への応用2020

    • Author(s)
      田口 善弘
    • Journal Title

      ファームステージ

      Volume: 19(11) Pages: 15-20

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Neurological Disorder Drug Discovery from Gene Expression with Tensor Decomposition2020

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      Current Pharmaceutical Design

      Volume: 25 Issue: 43 Pages: 4589-4599

    • DOI

      10.2174/1381612825666191210160906

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Conjecturing human genes that are easy to be double strand breaks by tensor decomposition2020

    • Author(s)
      Nobuo Hosaka , Y-h. Taguchi
    • Journal Title

      情報処理学会研究報告

      Volume: 2020-BIO-62(2) Pages: 1-6

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] カーネルテンソル分解を用いた教師なし学習による変数選択法 ~ バイオインフォマティクスへの応用 ~2020

    • Author(s)
      田口 善弘
    • Journal Title

      信学技法

      Volume: 120(395) Pages: 16-23

    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Journal Article] テンソル分解を用いた教師無し学習による変数選択法によるmi RNA/mRNA/プロテオームの統合解析2020

    • Author(s)
      田口 善弘
    • Journal Title

      情報処理学会研究報告

      Volume: 2020-BIO-64(10) Pages: 1-5

    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Tensor-Decomposition-Based Unsupervised Feature Extraction Applied to Prostate Cancer Multiomics Data2020

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      Genes

      Volume: 11 Issue: 12 Pages: 1493-1493

    • DOI

      10.3390/genes11121493

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] テンソル分解を用いた教師無し学習による変数選択法の一細胞RNA-seq解析への応用2020

    • Author(s)
      田口 善弘
    • Journal Title

      信学技報

      Volume: 119(360) Pages: 55-59

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Incremental Dilations Using CNN for Brain Tumor Classification2020

    • Author(s)
      Roy Sanjiban Sekhar、Rodrigues Nishant、Taguchi Y-h.
    • Journal Title

      Applied Sciences

      Volume: 10 Issue: 14 Pages: 4915-4915

    • DOI

      10.3390/app10144915

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] 物理学者、機械学習を使う2020

    • Author(s)
      田口善弘
    • Journal Title

      数理科学

      Volume: 58(5) Pages: 63-63

    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Identifying suitable tools for variant detection and differential gene expression using RNA-seq data2020

    • Author(s)
      Dharshini S. Akila Parvathy、Taguchi Y.-H.、Gromiha M. Michael
    • Journal Title

      Genomics

      Volume: 112 Issue: 3 Pages: 2166-2172

    • DOI

      10.1016/j.ygeno.2019.12.011

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417, KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Sp1を標的としたHBVウィルスの新規阻害剤の探索2020

    • Author(s)
      早川 路代 , 梅山 秀明 , 岩舘 満雄 , 田口 善弘 , 村上 善基
    • Journal Title

      情報処理学会研究報告

      Volume: 2020-BIO-61(1) Pages: 1-7

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] テンソル分解を用いた教師無し学習による変数選択法によるmiRNA/mRNA/プロテオームの統合解析2020

    • Author(s)
      田口 善弘
    • Journal Title

      情報処理学会研究報告

      Volume: 2020-BIO-64(10) Pages: 1-5

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Universal Nature of Drug Treatment Responses in Drug-Tissue-Wide Model-Animal Experiments Using Tensor Decomposition-Based Unsupervised Feature Extraction2020

    • Author(s)
      Taguchi Yh.、Turki Turki
    • Journal Title

      Frontiers in Genetics

      Volume: 11 Pages: 695-695

    • DOI

      10.3389/fgene.2020.00695

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Developing a diagnostic method for latent tuberculosis infection using circulating miRNA2020

    • Author(s)
      Hashimoto Shoji、Zhao Hong、Hayakawa Michiyo、Nakajima Koichi、Taguchi Y-h、Murakami Yoshiki
    • Journal Title

      Translational Medicine Communications

      Volume: 5 Issue: 1 Pages: 25-25

    • DOI

      10.1186/s41231-020-00078-7

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] A new advanced in silico drug discovery method for novel coronavirus (SARS-CoV-2) with tensor decomposition-based unsupervised feature extraction2020

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      PLOS ONE

      Volume: 15 Issue: 9 Pages: 0238907-0238907

    • DOI

      10.1371/journal.pone.0238907

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Unsupervised feature extraction applied to bioinformatics2020

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      Research Outreach

      Volume: 115 Issue: 115 Pages: 154-157

    • DOI

      10.32907/ro-115-154157

    • Open Access
    • Data Source
      KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] 対面かオンラインか,それが問題だ2020

    • Author(s)
      田口 善弘
    • Journal Title

      Physics Education in University

      Volume: 26 Issue: 3 Pages: 115-115

    • DOI

      10.11316/peu.26.3_115

    • NAID

      130007955957

    • ISSN
      1340-993X, 2432-1710
    • Year and Date
      2020-11-15
    • Language
      Japanese
    • Data Source
      KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] 物理学者、機械学習を使う2020

    • Author(s)
      田口善弘
    • Journal Title

      数理科学

      Volume: 58(5) Pages: 63-63

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Comprehensive analysis of liver and blood miRNA in precancerous conditions2020

    • Author(s)
      Umezu Tomohiro、Tsuneyama Koichi、Kanekura Kohsuke、Hayakawa Michiyo、Tanahashi Toshihito、Kawano Mitsuoki、Taguchi Y-h、Toyoda Hidenori、Tamori Akihiro、Kuroda Masahiko、Murakami Yoshiki
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1 Pages: 21766-21766

    • DOI

      10.1038/s41598-020-78500-1

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PROJECT-20H03593, KAKENHI-PROJECT-18K07069, KAKENHI-PROJECT-18K07244, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] テンソル分解に基づく教師なし学習による変数選択のRNAi 処理を行ったプラナリアのRNA-seq解析への適用2020

    • Author(s)
      田口善弘 , 鹿島誠
    • Journal Title

      情報処理学会研究報告

      Volume: 2020-BIO-62(1) Pages: 1-4

    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Journal Article] SCGRNs: Novel supervised inference of single-cell gene regulatory networks of complex diseases2020

    • Author(s)
      Turki Turki、Taguchi Y-h.
    • Journal Title

      Computers in Biology and Medicine

      Volume: 118 Pages: 103656-103656

    • DOI

      10.1016/j.compbiomed.2020.103656

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] カーネルテンソル分解を用いた教師なし学習による変数選択法 ~ バイオインフォマティクスへの応用 ~2020

    • Author(s)
      田口 善弘
    • Journal Title

      情報処理学会研究報告

      Volume: 2021-BIO-65(2) Pages: 1-9

    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Identification of miRNA signatures for kidney renal clear cell carcinoma using the tensor-decomposition method2020

    • Author(s)
      Ng Ka-Lok、Taguchi Y.-H.
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1 Pages: 15149-15149

    • DOI

      10.1038/s41598-020-71997-6

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
  • [Journal Article] Tensor Decomposition Based Unsupervised Feature Extraction Applied to Bioinformatics2019

    • Author(s)
      Taguchi Y-h.
    • Journal Title

      Application of Omics, AI and Blockchain in Bioinformatics Research

      Volume: 1 Pages: 159-187

    • DOI

      10.1142/9789811203589_0010

    • ISBN
      9789811203572, 9789811203589
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] Investigating the energy crisis in Alzheimer disease using transcriptome study2019

    • Author(s)
      Dharshini S. Akila Parvathy、Taguchi Y.-h.、Gromiha M. Michael
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 18509-18509

    • DOI

      10.1038/s41598-019-54782-y

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Exploring the selective vulnerability in Alzheimer disease using tissue specific variant analysis2019

    • Author(s)
      Akila Parvathy Dharshini S.、Taguchi Y-h.、Michael Gromiha M.
    • Journal Title

      Genomics

      Volume: 111 Issue: 4 Pages: 936-949

    • DOI

      10.1016/j.ygeno.2018.05.024

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] 『予備校のノリで学ぶ大学数学』2019

    • Author(s)
      田口 善弘
    • Journal Title

      Physics Education in University

      Volume: 25 Issue: 2 Pages: 103-104

    • DOI

      10.11316/peu.25.2_103

    • NAID

      130007690075

    • ISSN
      1340-993X, 2432-1710
    • Year and Date
      2019-07-15
    • Language
      Japanese
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] 『インストールいらずのLATEX入門』2019

    • Author(s)
      田口 善弘
    • Journal Title

      Physics Education in University

      Volume: 25 Issue: 3 Pages: 147-148

    • DOI

      10.11316/peu.25.3_147

    • NAID

      130007761447

    • ISSN
      1340-993X, 2432-1710
    • Year and Date
      2019-11-15
    • Language
      Japanese
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Discovery of a Robust Gene Regulatory Network with a Complex Transcription Factor Network on Organ Cancer Cell-line RNA Sequence Data2019

    • Author(s)
      Kalbuaji Bharata、Taguchi Y-H.、Konagaya Akihiko
    • Journal Title

      Chem-Bio Informatics Journal

      Volume: 19 Issue: 0 Pages: 32-55

    • DOI

      10.1273/cbij.19.32

    • NAID

      130007723654

    • ISSN
      1347-0442, 1347-6297
    • Year and Date
      2019-09-30
    • Language
      English
    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
  • [Journal Article] バイオインフォマティクスと倫理・社会2019

    • Author(s)
      田口 善弘
    • Journal Title

      信学技報

      Volume: 119(329) Pages: 47-50

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Machine learning algorithms for predicting drugs?tissues relationships2019

    • Author(s)
      Turki Turki、Taguchi Y-h.
    • Journal Title

      Expert Systems with Applications

      Volume: 127 Pages: 167-186

    • DOI

      10.1016/j.eswa.2019.02.013

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] Drug candidate identification based on gene expression of treated cells using tensor decomposition-based unsupervised feature extraction for large-scale data2019

    • Author(s)
      Taguchi Y-h.
    • Journal Title

      BMC Bioinformatics

      Volume: 19 Issue: S13 Pages: 338-338

    • DOI

      10.1186/s12859-018-2395-8

    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] 生物学と物理学2019

    • Author(s)
      田口善弘
    • Journal Title

      窮理

      Volume: 12 Pages: 1-9

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] 機械学習のコモディティ化2019

    • Author(s)
      田口 善弘
    • Journal Title

      Butsuri

      Volume: 74 Issue: 9 Pages: 659-660

    • DOI

      10.11316/butsuri.74.9_659

    • NAID

      130007807136

    • ISSN
      0029-0181, 2423-8872
    • Year and Date
      2019-09-05
    • Language
      Japanese
    • Open Access
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Tensor Decomposition-Based Unsupervised Feature Extraction Applied to Single-Cell Gene Expression Analysis2019

    • Author(s)
      Taguchi Y-h.、Turki Turki
    • Journal Title

      Frontiers in Genetics

      Volume: 10 Pages: 864-864

    • DOI

      10.3389/fgene.2019.00864

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
  • [Journal Article] テンソル分解と主成分分解を用いた教師なし学習による社会性昆虫のカーストの脳の遺伝子発現プロファイルとDNAメチル化の解析2019

    • Author(s)
      田口善弘
    • Journal Title

      情報処理学会研究報告

      Volume: 2019-BIO-58(61) Pages: 1-6

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Multiomics Data Analysis Using Tensor Decomposition Based Unsupervised Feature Extraction2019

    • Author(s)
      Taguchi Y-h.
    • Journal Title

      Intelligent Computing Theories and Application

      Volume: 1 Pages: 565-574

    • DOI

      10.1007/978-3-030-26763-6_54

    • ISBN
      9783030267629, 9783030267636
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] テンソル分解に基づく教師なし学習による変数選択はMicroRNAトランスフェクションにより仲介されるmRNAの配列非特異的オフターゲット調節の普遍的性質を同定することができる2019

    • Author(s)
      田口 善弘
    • Journal Title

      情報処理学会研究会報告

      Volume: 2019-BIO-59(3) Pages: 1-7

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] テンソル分解を用いた教師なし学習による変数選択法のTCGAデータベースにおける卵巣がんデータのmicroRNA発現プロファイルとメチル化プロファイルへの適用2019

    • Author(s)
      田口 善弘 , 呉 家樂
    • Journal Title

      情報処理学会研究報告

      Volume: 2019-BIO-60(2) Pages: 1-7

    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Journal Article] Tensor decomposition-based and principal-component-analysis-based unsupervised feature extraction applied to the gene expression and methylation profiles in the brains of social insects with multiple castes2018

    • Author(s)
      Taguchi Y.-H.
    • Journal Title

      BMC Bioinformatics

      Volume: 19 Issue: S4 Pages: 99-99

    • DOI

      10.1186/s12859-018-2068-7

    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] Tensor Decomposition?Based Unsupervised Feature Extraction for Integrated Analysis of TCGA Data on MicroRNA Expression and Promoter Methylation of Genes in Ovarian Cancer2018

    • Author(s)
      Taguchi Y-h.、Ng Ka-Lok
    • Journal Title

      IEEE BIBE2018

      Volume: 1 Pages: 1-1

    • DOI

      10.1109/bibe.2018.00045

    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] Identification of candidate drugs using tensor-decomposition-based unsupervised feature extraction in integrated analysis of gene expression between diseases and DrugMatrix datasets2017

    • Author(s)
      Taguchi Y.-h.
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 13733-13733

    • DOI

      10.1038/s41598-017-13003-0

    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] Genetic Association between Amyotrophic Lateral Sclerosis and Cancer2017

    • Author(s)
      Taguchi Y-h.、Wang Hsiuying
    • Journal Title

      Genes

      Volume: 8 Issue: 10 Pages: 243-243

    • DOI

      10.3390/genes8100243

    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] One-class Differential Expression Analysis using Tensor Decomposition-based Unsupervised Feature Extraction Applied to Integrated Analysis of Multiple Omics Data from 26 Lung Adenocarcinoma Cell Lines2017

    • Author(s)
      Taguchi Y-h.
    • Journal Title

      BIBE2017

      Volume: 1 Pages: 1-12

    • DOI

      10.1109/bibe.2017.00-66

    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] Tensor decomposition-based unsupervised feature extraction identifies candidate genes that induce post-traumatic stress disorder-mediated heart diseases2017

    • Author(s)
      Taguchi Y.-H.
    • Journal Title

      BMC Medical Genomics

      Volume: 10 Issue: S4 Pages: 67-67

    • DOI

      10.1186/s12920-017-0302-1

    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] Tensor decomposition-based unsupervised feature extraction applied to matrix products for multi-view data processing2017

    • Author(s)
      Taguchi Y-h.
    • Journal Title

      PLOS ONE

      Volume: 12 Issue: 8 Pages: e0183933-e0183933

    • DOI

      10.1371/journal.pone.0183933

    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Journal Article] Principal component analysis based unsupervised feature extraction applied to publicly available gene expression profiles provides new insights into the mechanisms of action of histone deacetylase inhibitors2016

    • Author(s)
      YH. Taguchi
    • Journal Title

      Neuroepigenetics

      Volume: 8 Pages: 1-18

    • DOI

      10.1016/j.nepig.2016.10.001

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Principal component analysis based unsupervised feature extraction applied to budding yeast temporally periodic gene expression2016

    • Author(s)
      YH Taguchi
    • Journal Title

      Biodata Mining

      Volume: 9 Issue: 1 Pages: 22-22

    • DOI

      10.1186/s13040-016-0101-9

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Comparative Gene Expression Analysis of Mouse and Human Cardiac Maturation2016

    • Author(s)
      Hideki Uosaki, Y.H Taguchi
    • Journal Title

      Genomics Proteomics & Bioinformatics

      Volume: 14 Issue: 4 Pages: 207-215

    • DOI

      10.1016/j.gpb.2016.04.004

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] SFRP1 is a possible candidate for epigenetic therapy in non-small cell lung cancer2016

    • Author(s)
      YH Taguchi, Mitsuo Iwadate, Hideaki Umeyama
    • Journal Title

      BMC Medical Genomics

      Volume: 9(Suppl 1) Issue: S1 Pages: 28-28

    • DOI

      10.1186/s12920-016-0196-3

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Principal Components Analysis Based Unsupervised Feature Extraction Applied to Gene Expression Analysis of Blood from Dengue Haemorrhagic Fever Patients2016

    • Author(s)
      YH. Taguchi
    • Journal Title

      Scientific reports

      Volume: 7 Issue: 1 Pages: 44016-44016

    • DOI

      10.1038/srep44016

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] MicroRNA expression in hepatocellular carcinoma after the eradication of chronic hepatitis virus C infection using interferon therapy2016

    • Author(s)
      Tamori, A
    • Journal Title

      Hepatology Res

      Volume: 46 Issue: 3 Pages: 26-35

    • DOI

      10.1111/hepr.12518

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-15K08649, KAKENHI-PROJECT-15K09019, KAKENHI-PUBLICLY-26120528, KAKENHI-PROJECT-15K10194
  • [Journal Article] Identification of More Feasible MicroRNA-mRNA Interactions within Multiple Cancers Using Principal Component Analysis Based Unsupervised Feature Extraction2016

    • Author(s)
      YH Taguchi
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 17(5) Issue: 5 Pages: 696-696

    • DOI

      10.3390/ijms17050696

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Heuristic principal component analysis-based unsupervised feature extraction and its application to gene expression analysis of amyotrophic lateral sclerosis data sets2015

    • Author(s)
      YH Taguchi, Mitsuo Iwadate, Hideaki Umeyama
    • Journal Title

      2015 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology

      Volume: 0 Pages: 1-10

    • DOI

      10.1109/cibcb.2015.7300274

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Comprehensive analysis of transcriptome and metabolome analysis in Intrahepatic Cholangiocarcinoma and Hepatocellular Carcinoma2015

    • Author(s)
      Murakami, Y
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 16294-16294

    • DOI

      10.1038/srep16294

    • NAID

      120005820886

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-15K08649, KAKENHI-PROJECT-26461909, KAKENHI-PUBLICLY-26120528
  • [Journal Article] Principal component analysis-based unsupervised feature extraction applied to in silico drug discovery for posttraumatic stress disorder-mediated heart disease2015

    • Author(s)
      YH Taguchi, M Iwadate, H Umeyama
    • Journal Title

      BMC bioinformatics

      Volume: 16(1) Issue: 1 Pages: 139-139

    • DOI

      10.1186/s12859-015-0574-4

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Apparent microRNA-Target-specific Histone Modification in Mammalian Spermatogenesis2015

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      Evolutionary Bioinformatics

      Volume: 11:Suppl 1 Pages: 13-26

    • DOI

      10.4137/ebo.s21832

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23300357, KAKENHI-PUBLICLY-26120528
  • [Journal Article] <i>In silico</i> Spleen Tyrosine Kinase Inhibitor Screening by ChooseLD2015

    • Author(s)
      H Umeyama, M Iwadate, YH Taguchi
    • Journal Title

      IPSJ Transactions on Bioinformatics

      Volume: 8 Issue: 0 Pages: 14-20

    • DOI

      10.2197/ipsjtbio.8.14

    • NAID

      130005094264

    • ISSN
      1882-6679
    • Language
      English
    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Identification of aberrant gene expression associated with aberrant promoter methylation in primordial germ cells between E13 and E16 rat F3 generation vinclozolin lineage2015

    • Author(s)
      Y-H. Taguchi
    • Journal Title

      BMC Bioinformatics

      Volume: 16(Suppl 18) Issue: S18

    • DOI

      10.1186/1471-2105-16-s18-s16

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Identification of potential inhibitors based on compound proposal contest: Tyrosine-protein kinase Yes as a target2015

    • Author(s)
      Chiba S, Akiyama Y, Sekijima M.
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 1-13

    • DOI

      10.1038/srep17209

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-24240044, KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-15J11261, KAKENHI-PROJECT-25430186, KAKENHI-PROJECT-26730152, KAKENHI-PUBLICLY-26120528
  • [Journal Article] Exploring effective multiplicity in multichannel functional near-infrared spectroscopy using eigenvalues of correlation matrices.2015

    • Author(s)
      Minako Uga, Ippeita Dan, Haruka Dan, Yasushi Kyutoku, Y-h Taguchi, Eiju Watanabe
    • Journal Title

      Neurophotonics

      Volume: 2 Issue: 1 Pages: 015002-015002

    • DOI

      10.1117/1.nph.2.1.015002

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-25670625, KAKENHI-PROJECT-25282243, KAKENHI-PUBLICLY-26120528
  • [Journal Article] Subtype specific promoter methylation in glioblastoma2014

    • Author(s)
      Kiyohiko Sakamoto, Y-h Taguchi
    • Journal Title

      IPSJ SIG Technical Report

      Volume: 2014-BIO-38(2) Pages: 1-2

    • Acknowledgement Compliant
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Universal disease biomarker: can a fixed set of blood microRNAs diagnose multiple diseases?2014

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      BMC Research Notes

      Volume: 7(1) Issue: 1 Pages: 581-581

    • DOI

      10.1186/1756-0500-7-581

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Apparent microRNA-target-specific histone modification in mammalian spermatogenesis2014

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      IPSJ SIG Technical Report

      Volume: 2014-BIO-39(2) Pages: 1-2

    • Acknowledgement Compliant
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Comparison of Hepatocellular Carcinoma miRNA Expression Profiling as Evaluated by Next Generation Sequencing and Microarray2014

    • Author(s)
      Yoshiki Murakami, Toshihito Tanahashi, Rina Okada, Hidenori Toyoda, Takashi Kumada, Masaru Enomoto, Akihiro Tamori, Norifumi Kawada, Y-H Taguchi, Takeshi Azuma
    • Journal Title

      PLoS ONE

      Volume: 9(9) Issue: 12 Pages: e116434-e116434

    • DOI

      10.1371/journal.pone.0116434

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Bioinformatic screening of autoimmune disease genes and protein structure prediction with FAMS for drug discovery2014

    • Author(s)
      Shigeharu Ishida, Hideaki Umeyama, Mitsuo Iwadate, Y-h. Taguchi
    • Journal Title

      Protein Pept Lett

      Volume: 21(8) Issue: 8 Pages: 823-839

    • DOI

      10.2174/09298665113209990052

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Journal Article] Correlation between miRNA-targeted-gene promoter methylation and miRNA regulation of target genes - See more at: http://f1000research.com/articles/2-21/v3#sthash.46klJq6T.dpuf2013

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      F1000Research

      Volume: 2 Pages: 21-21

    • DOI

      10.12688/f1000research.2-21.v3

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Possible miRNA coregulation of target genes in brain regions by both differential miRNA expression and miRNA-targeting-specific promoter methylation2013

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      IPSJ SIG Technical Reports

      Volume: 2013-BIO-33 Pages: 1-6

    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Principal component analysis based feature extraction approach to identify circulating microRNA biomarkers2013

    • Author(s)
      Y-h. Taguchi, Yoshiki Murakami
    • Journal Title

      PLoS ONE

      Volume: 8 Issue: 6 Pages: e66714-e66714

    • DOI

      10.1371/journal.pone.0066714

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] MicroRNA-mediated regulation of target genes in several brain regions is correlated to both microRNA-targeting-specific promoter methylation and differential microRNA expression.2013

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      BioData mining

      Volume: 6 Issue: 1 Pages: 11-11

    • DOI

      10.1186/1756-0381-6-11

    • Peer Reviewed / Acknowledgement Compliant / Open Access
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Competitive target gene regulation by promoter methylation and miRNA2012

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      IPSJ SIG Technical Reports

      Volume: 2012-BIO-31 Pages: 1-6

    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Inference of target gene regulation via miRNAs during cell senescence by MiRaGE Server2012

    • Author(s)
      Y-h.Taguchi
    • Journal Title

      IPSJ SIG Technical Report

      Volume: 2012-BIO-28:3 Pages: 1-6

    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] 発現データからmiRNAの働きを予測する2012

    • Author(s)
      田口善弘
    • Journal Title

      実験医学

      Volume: 30 Pages: 1327-1332

    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Inference of Target Gene Regulation via miRNAs during Cell Senescence by Using the MiRaGE Server2012

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      Aging and Disease

      Volume: 3 Pages: 301-306

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Inference of Target Gene Regulation via miRNAs during Cell Senescence by Using the MiRaGE Server2012

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      Communications in Computer and Information Science

      Volume: 304 Pages: 441-446

    • DOI

      10.1007/978-3-642-31837-5_64

    • ISBN
      9783642318368, 9783642318375
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Search of miRNAs critical for medulloblastoma formationusing MiRaGE method2011

    • Author(s)
      Y-h.Taguchi, Jun Yasuda
    • Journal Title

      IPSJ SIG Technical Report

      Volume: 2011-BIO-25:5 Pages: 1-6

    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Inference of Gene Regulation via miRNAs During ES Cell Differentiation Using MiRaGE Method2011

    • Author(s)
      M.Yoshizawa, Y-h.Taguchi, J.Yasuda
    • Journal Title

      Int.J.Mol.Sci.

      Volume: 12 Issue: 12 Pages: 9265-9276

    • DOI

      10.3390/ijms12129265

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Gene expression regulation during differentiation from murine ES cells due to microRNA2011

    • Author(s)
      M.Yoshizawa, Y-h.Taguchi
    • Journal Title

      IPSJ SIG Technical Report

      Volume: 2011-BIO-25:38 Pages: 1-2

    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] MiRaGE : Inference of Gene Expression Regulation via MicroRNA Transfection II2011

    • Author(s)
      Y-h.Taguchi, Jun Yasuda
    • Journal Title

      Lecture Notes in Computer Science

      Volume: 6840 Pages: 129-135

    • DOI

      10.1007/978-3-642-24553-4_19

    • ISBN
      9783642245527, 9783642245534
    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Journal Article] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008

    • Author(s)
      Fumiaki Kataoka, Y-h. Taguchi
    • Journal Title

      IPSJ SIG Technical Report 2008-BIO-12

      Pages: 55-62

    • NAID

      110006824832

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Cancer discrimination based upon non-metric multidimensional scaling method2008

    • Author(s)
      Masaru Konno, Y-h. Taguchi
    • Journal Title

      IPSJ SIG Technical Report 2008-BIO-13

      Pages: 13-16

    • NAID

      110006839042

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008

    • Author(s)
      Fumiaki Kataoka, Y-h. Taguchi
    • Journal Title

      PSJ SIG Technical Report 2008-BIO-12

      Pages: 55-62

    • NAID

      110006824832

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Nonmetric Distances for Barcode of Life2008

    • Author(s)
      Hisamitsu Akiba, Y-h. Taguchi
    • Journal Title

      IPSJ Transactions on Bioinformatics 1

      Pages: 35-41

    • NAID

      110006343480

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008

    • Author(s)
      Fumiaki Kataoka, Y-h.Taguchi
    • Journal Title

      IPSJ SIG Technical Report 2008[15]

      Pages: 55-61

    • NAID

      110006824832

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Markov random field models for protein function prediction2008

    • Author(s)
      Hisamitsu Akiba, Y-h. Taguchi
    • Journal Title

      IPSJ SIG Technical Report 2008-BIO-14

      Pages: 51-54

    • NAID

      40016268107

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Gene Ontology Term Prediction Based upon Amino Acid Occurrence2008

    • Author(s)
      Y-h. Taguchi, M. Michael Gromiha
    • Journal Title

      2008 International Joint Conference on Neural Networks

      Pages: 616-621

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Markov random field models for protein function prediction2008

    • Author(s)
      Hisamitsu Akiba, Y-h. Taguchi
    • Journal Title

      IPST SIG Technical Report 2008-BIO-14

      Pages: 51-54

    • NAID

      40016268107

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] A Novel Discrimination of GO term Annotated Proteins based on Amino Acid Occurrence and Composition2008

    • Author(s)
      Y-h. Taguchi, M. Michael Gromiha
    • Journal Title

      Pattern Recognition in Bioinformatics, Thirs IAPR Internatiocal Workshop, PRIB2008, Supplementary Proceedings

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] A Novel Discrimination of GO term Annotated Proteins based on Amino Acid Occurrence and Composition, Pattern Recognition in Bioinformatics2008

    • Author(s)
      Y-h. Taguchi, M. Michael Gromiha
    • Journal Title

      Thirs IAPR Internatiocal Workshop, PRIB2008, Supplementary Proccedings

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Application of amino acid occurrence for discriminating different folding types of globular protein2007

    • Author(s)
      Y-h. Taguchi, MM Gromiha
    • Journal Title

      BMC Bioinformatics 8

      Pages: 404-404

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Nonmetric distances for Barcode of Life2007

    • Author(s)
      Hisamitsu Akiba, Y-h.Taguchi
    • Journal Title

      IPSJ SIG Technical Report 2007[60]

      Pages: 31-38

    • NAID

      110006343480

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] A robust measure of correlation between two genes on a microarray using non-metric multidimensional scaling method2007

    • Author(s)
      Y-h. Taguchi
    • Journal Title

      IPSJ SIG Technical Report 2007-BIO-10

      Pages: 1-8

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] A robust measure of correlation between two genes on a microarray using non-metric multidimensional scaling method2007

    • Author(s)
      Y-h.Taguchi
    • Journal Title

      IPSJ SIG Technical Report 2007[89]

      Pages: 1-8

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Nonmetric distances for Barcode of Life2007

    • Author(s)
      Hisamitsu Akiba, Y-h. Taguchi
    • Journal Title

      IPSJ SIG Technical Report 2007-BIO-9

      Pages: 31-38

    • NAID

      110006343480

    • Data Source
      KAKENHI-PROJECT-19500254
  • [Journal Article] Protein Fold Recognition based upon the Amino Acid Occurrence2007

    • Author(s)
      Y-h. Taguchi, M. Michael Gromiha
    • Journal Title

      Pattern Recognition in Bioinformatics, Second IAPR Internatiocal WorkshopWorkshop, PRIB2007, Proccedings, Springer 4774

      Pages: 120-131

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] TDbasedUFE and TDbasedUFEadv: bioconductor packages to perform tensor decomposition based unsupervised feature extraction2023

    • Author(s)
      Y-h. Taguchi
    • Organizer
      BiocAsia2023
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Advanced Tensor Decomposition-Based Integrated Analysis of Protein-Protein Interaction with Cancer Gene Expression Can Improve Coincidence with Clinical labels2023

    • Author(s)
      YH Taguchi , Turki Turki
    • Organizer
      2023 11th International Conference on Bioinformatics and Computational Biology (ICBCB)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Identification of DNA loops in the Genome by Multi-Dimensional Scaling2022

    • Author(s)
      Ryo Ishibashi , Y-H. Taguchi
    • Organizer
      ISMB2022
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Identification of DNA loops in the Genome by Multi-Dimensional Scaling2022

    • Author(s)
      Ryo Ishibashi , Y-H. Taguchi
    • Organizer
      ISMB2022
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] Tensor decomposition and principal component analysis based unsupervised feature extraction with optimized standard deviation applied to gene expression, DNA methylation and histone modification2022

    • Author(s)
      Y-H. Taguchi , Ryo Ishibashi
    • Organizer
      ISMB2022
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Tensor decomposition and principal component analysis based unsupervised feature extraction with optimized standard deviation applied to gene expression, DNA methylation and histone modification2022

    • Author(s)
      Y-H. Taguchi , Ryo Ishibashi
    • Organizer
      ISMB2022
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] Application of PCA-based unsupervised feature extraction for gene selection associated with COVID-19 severity2021

    • Author(s)
      Mamoru Shimo , Kota Fujisawa , Y-H. Taguchi , Sinya Ikematu , Ryota Miyata
    • Organizer
      第10回生命医薬情報学連合大会
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Tensor-Decomposition-Based Unsupervised Feature Extraction Applied to Prostate Cancer Multiomics Data2021

    • Author(s)
      Y-h. Taguchi
    • Organizer
      8th ANNUAL CONGRESS of the European society for translational medicine
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Mathematical formulation and application of kernel tensor decomposition based unsupervised feature extraction2021

    • Author(s)
      Y-h. Taguchi , Turki Turki
    • Organizer
      第10回生命医薬情報学連合大会
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Projection in genomic analysis: A theoretical basis to rationalize tensor decomposition and principal component analysis as feature selection tools2021

    • Author(s)
      Y-h. Taguchi , Turki Turki
    • Organizer
      The 20th International Conference on Bioinformatics
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] The 20th International Conference on Bioinformatics2021

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The 3rd International Symposium on Engineering and Technology (ISET 2021)
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Application of Tensor Decomposition based Unsupervised Feature Extraction to Single Cell RNA-seq Data Analysis2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      ICBCB2020
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] テンソル分解を用いた教師なし学習による変数選択法を用いたゲノムデータ解析2020

    • Author(s)
      田口善弘
    • Organizer
      イノベーションジャパン
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] Selecting the genes related to COVID-19 with PCA-based unsupervised feature extraction2020

    • Author(s)
      Kota Fujisawa , Mamoru Shimo , Yoshihiro Taguchi , Shinya Ikematu , Ryota Miyata
    • Organizer
      CBI学会2020年会
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬のリポジショニング2020

    • Author(s)
      田口善弘 , Turki Turki
    • Organizer
      第43回日本分子生物学会年会
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] テンソル分解を用いた教師無し学習による変数選択法によるmiRNA/mRNA/プロテオームの統合解析2020

    • Author(s)
      田口善弘
    • Organizer
      情報処理学会バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Selecting the genes related to COVID-19 with PCA-based unsupervised feature extraction2020

    • Author(s)
      Kota Fujisawa , Mamoru Shimo , Yoshihiro Taguchi , Shinya Ikematu , Ryota Miyata
    • Organizer
      CBI学会2020年会
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬のリポジショニング2020

    • Author(s)
      田口善弘
    • Organizer
      第43回日本分子生物学会年会
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] テンソル分解を用いた教師無し学習による変数選択法の一細胞RNA-seq解析への応用2020

    • Author(s)
      田口 善弘
    • Organizer
      電子情報通信学会情報論的学習理論と機械学習 (IBISML) 研究会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] Conjecturing human genes that are easy to be double strand breaks by tensor decomposition2020

    • Author(s)
      Nobuo Hosaka , Y-h. Taguchi
    • Organizer
      情報処理学会バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] In silico drug discovery for COVID-19 using gene expression profiles of mouse infected by MHV and those of human cell lines infected by SARS-CoV-22020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      7th Annual Congress of the European Society for Translational Medicine on Covid-19
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Tensor decomposition based unsupervised Feature Extraction applied to in silico COVID-19 drug siscovery based upon analysis of gene expression profiles altered by SARS-CoV-2 infection2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      第九回生命医薬情報学連合大会(IIBMP2020)
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] Identification of Transcription Factors, Biological Pathways, and Diseases as Mediated by N6-methyladenosine using Tensor Decomposition-Based Unsupervised Feature Extraction.2020

    • Author(s)
      Y-h. Taguchi , S Akila Parvathy Dharshini , M. Michael , Gromiha
    • Organizer
      The 2nd International Symposium on Engineering and Technology (ISET 2020)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] テンソル分解により二本鎖切断になりやすいヒト遺伝子の推定2020

    • Author(s)
      保坂伸生 , 田口善弘
    • Organizer
      第九回生命医薬情報学連合大会
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] Selecting the genes related to COVID-19 with PCA-based unsupervised feature extraction2020

    • Author(s)
      Kota Fujisawa , Mamoru Shimo , Yoshihiro Taguchi , Shinya Ikematu , Ryota Miyata
    • Organizer
      CBI学会2020年会
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] テンソル分解に基づく教師なし学習による変数選択のRNAi 処理を行ったプラナリアのRNA-seq解析への適用2020

    • Author(s)
      田口善弘 , 鹿島誠
    • Organizer
      情報処理学会バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬の探索2020

    • Author(s)
      田口善弘
    • Organizer
      IBIS2020
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Tensor decomposition based unsupervised Feature Extraction applied to in silico COVID-19 drug siscovery based upon analysis of gene expression profiles altered by SARS-CoV-2 infection2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      第九回生命医薬情報学連合大会(IIBMP2020)
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬のリポジショニング2020

    • Author(s)
      田口善弘 , Turki Turki
    • Organizer
      第43回日本分子生物学会年会
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] カーネルテンソル分解を用いた教師なし学習による変数選択法 ~ バイオインフォマティクスへの応用 ~2020

    • Author(s)
      田口善弘
    • Organizer
      情報処理学会バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Unsupervised tensor decomposition-based method to extract candidate transcription factors as histone modification bookmarks in post-mitotic transcriptional reactivation2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The 19th International Conference on Bioinformatics (InCoB 2020)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] In silico drug discovery for COVID-19 using gene expression profiles of mouse infected by MHV and those of human cell lines infected by SARS-CoV-22020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      7th Annual Congress of the European Society for Translational Medicine on Covid-19
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] Repurposing drugs for targeting SARS-Cov-22020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      IEEE ICBCB2020
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] Application of Tensor Decomposition based Unsupervised Feature Extraction to Single Cell RNA-seq Data Analysis2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      IEEE ICBCB2020
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] Principal Component Analysis, Tensor Decomposition, and Kernel Tensor Decomposition Based Unsupervised Feature Extraction Applied to Bioinformatics2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      2020 International Symposium on Automation, Information and Computing
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] Principal Component Analysis, Tensor Decomposition, and Kernel Tensor Decomposition Based Unsupervised Feature Extraction Applied to Bioinformatics2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      2020 International Symposium on Automation, Information and Computing
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Unsupervised tensor decomposition-based method to extract candidate transcription factors as histone modification bookmarks in post-mitotic transcriptional reactivation2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The 19th International Conference on Bioinformatics (InCoB 2020)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬の探索2020

    • Author(s)
      田口善弘 , Turki Turki
    • Organizer
      IBIS2020
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] テンソル分解により二本鎖切断になりやすいヒト遺伝子の推定2020

    • Author(s)
      保坂伸生 , 田口善弘
    • Organizer
      保坂伸生 , 田口善弘
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] テンソル分解を用いた教師なし学習による変数選択法を用いたゲノムデータ解析2020

    • Author(s)
      田口善弘
    • Organizer
      イノベーションジャパン
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Tensor decomposition based unsupervised Feature Extraction applied to in silico COVID-19 drug siscovery based upon analysis of gene expression profiles altered by SARS-CoV-2 infection2020

    • Author(s)
      田口善弘
    • Organizer
      第九回生命医薬情報学連合大会(IIBMP2020)
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] Repurposing drugs for targetting SARS-Cov-22020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      IEEE ICBCB2020
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] テンソル分解を用いた教師なし学習による変数選択法を用いたゲノムデータ解析2020

    • Author(s)
      田口善弘
    • Organizer
      イノベーションジャパン
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] Identification of Transcription Factors, Biological Pathways, and Diseases as Mediated by N6-methyladenosine using Tensor Decomposition-Based Unsupervised Feature Extraction.2020

    • Author(s)
      Y-h. Taguchi , S Akila Parvathy Dharshini , M. Michael , Gromiha
    • Organizer
      The 2nd International Symposium on Engineering and Technology (ISET 2020)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] Sp1を標的としたHBVウィルスの新規阻害剤の探索2020

    • Author(s)
      早川 路代 , 梅山 秀明 , 岩舘 満雄 , 田口 善弘 , 村上 善基
    • Organizer
      情報処理学会第61回BIO研究発表会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] Unsupervised tensor decomposition-based method to extract candidate transcription factors as histone modification bookmarks in post-mitotic transcriptional reactivation2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The 19th International Conference on Bioinformatics (InCoB 2020)
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] In silico drug discovery for COVID-19 using gene expression profiles of mouse infected by MHV and those of human cell lines infected by SARS-CoV-22020

    • Author(s)
      Y-h. Taguchi, Turki Turki
    • Organizer
      7th Annual Congress of the European Society for Translational Medicine on Covid-19
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] Application of Tensor Decomposition based Unsupervised Feature Extraction to Single Cell RNA-seq Data Analysis2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      IEEE ICBCB2020
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬の探索2020

    • Author(s)
      田口善弘 , Turki Turki
    • Organizer
      IBIS2020
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] カーネルテンソル分解を用いた教師なし学習による変数選択法 ~ バイオインフォマティクスへの応用 ~2020

    • Author(s)
      田口善弘
    • Organizer
      情報論的学習理論と機械学習 (IBISML) 研究会
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Principal Component Analysis, Tensor Decomposition, and Kernel Tensor Decomposition Based Unsupervised Feature Extraction Applied to Bioinformatics2020

    • Author(s)
      Y-h. Taguchi
    • Organizer
      2020 International Symposium on Automation, Information and Computing
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] テンソル分解により二本鎖切断になりやすいヒト遺伝子の推定2020

    • Author(s)
      保坂伸生 , 田口善弘
    • Organizer
      第九回生命医薬情報学連合大会(IIBMP2020)
    • Data Source
      KAKENHI-PROJECT-20K12067
  • [Presentation] Identification of Transcription Factors, Biological Pathways, and Diseases as Mediated by N6-methyladenosine using Tensor Decomposition-Based Unsupervised Feature Extraction.2020

    • Author(s)
      Y-h. Taguchi , S Akila Parvathy Dharshini , M. Michael , Gromiha
    • Organizer
      The 2nd International Symposium on Engineering and Technology (ISET 2020)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-20H04848
  • [Presentation] Multiomics Data Analysis Using Tensor Decomposition Based Unsupervised Feature Extraction2019

    • Author(s)
      Taguchi Y-h.
    • Organizer
      International Conference on Intelligent Computing
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] テンソル分解を用いた教師無し学習による変数選択のマルチオミックスデータ解析への応用2019

    • Author(s)
      田口善弘
    • Organizer
      第42回日本分子生物学会年会 2019年12月3日 日本分子生物学会
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] Application of tensor decomposition based unsupervised feature extraction to multi- omics data set2019

    • Author(s)
      Y-h. Taguchi
    • Organizer
      BioInfOMICS2019
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] バイオインフォマティクスと倫理・社会2019

    • Author(s)
      田口 善弘
    • Organizer
      電子情報通信学会技術と社会・倫理研究会
    • Invited
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] テンソル分解を用いた教師なし学習による変数選択法のTCGAデータベースにおける卵巣がんデータのmicroRNA発現プロファイルとメチル化プロファイルへの適用2019

    • Author(s)
      田口 善弘 , 呉 家樂
    • Organizer
      情報処理学会第60回BIO研究発表会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] Tensor decomposition based unsupervised feature extraction applied to bioinformatics2019

    • Author(s)
      Y-h. Taguchi
    • Organizer
      PreMed'19
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] テンソル分解と主成分分解を用いた教師なし学習による社会性昆虫のカーストの脳の遺伝子発現プロファイルとDNAメチル化の解析2019

    • Author(s)
      田口 善弘
    • Organizer
      情報処理学会第58回BIO研究発表会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] テンソル分解に基づく教師なし学習による変数選択はMicroRNAトランスフェクションにより仲介されるmRNAの配列非特異的オフターゲット調節の普遍的性質を同定することができる2019

    • Author(s)
      田口 善弘
    • Organizer
      情報処理学会第59回BIO研究発表会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] Tensor decomposition based unsupervised feature extraction applied to drug discovery from gene expression analysis2019

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The 5th IITM - Tokyo Tech Joint Symposium titled "Current trends in Bioinformatics: Big data analysis, machine learning and drug design"
    • Invited / Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-19H05270
  • [Presentation] Tensor decomposition/principal component analysis based unsupervised feature extraction applied to brain gene expression and methylation profiles of social insects with multiple castes2018

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The Sixteenth Asia Pacific Bioinformatics Conference
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] Drug candidate identification based on gene expression of treated cells using tensor decomposition-based unsupervised feature extraction for large-scale data2018

    • Author(s)
      Y-h. Taguchi
    • Organizer
      InCob2018
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] テンソル分解に基づく1クラスの示差的発現解析による26の肺腺癌細胞株からの複数のオミックスデータの統合解析への適用2018

    • Author(s)
      田口善弘
    • Organizer
      情報処理学会第53回BIO研究発表会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] マイクロRNAのパスウェイ解析システムの開発2018

    • Author(s)
      樋口 千洋, 田口善弘
    • Organizer
      情報処理学会第53回BIO研究発表会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] Tensor Decomposition Based Unsupervised Feature Extraction for Integrated Analysis of TCGA Data on MicroRNA Expression and Promoter Methylation of Genes in Ovarian Cancer2018

    • Author(s)
      YH Taguchi, Ka-Lok Ng
    • Organizer
      IEEE BIBE 2018
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] 主成分分析を用いた教師なし学習による筋萎縮性側索硬化症とがんの遺伝的関連性の解明2017

    • Author(s)
      田口善弘、王 秀瑛
    • Organizer
      情報処理学会第52回バイオ情報学研究会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] One-class Differential Expression Analysis using Tensor Decomposition-based Unsupervised Feature Extraction Applied to Integrated Analysis of Multiple Omics Data from 26 Lung Adenocarcinoma Cell Lines2017

    • Author(s)
      Y-h. Taguchi
    • Organizer
      2017 IEEE 17th International Conference on Bioinformatics and Bioengineering
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] Tensor decomposition-based unsupervised feature extraction identifies candidate genes that induce post-traumatic stress disorder-mediated heart diseases2017

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The 16th International Conference on Bioinformatics
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] Tensor Decomposition based Unsupervised Feature Extraction Identified universal nature of Sequence-non-specific Off-target Regulation of mRNA Mediated by microRNA Transfection2017

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The 28th International Conference on Genome Informatics
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] 主成分分析を用いた教師なし学習による変数選択のデング出血熱患者血液遺伝子発現プロファイル解析への応用2017

    • Author(s)
      田口善弘
    • Organizer
      情報処理学会第113回MPS・第50回BIO合同研究発表会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] FAMSとchooseLDを用いたインシリコ創薬パイプライン2017

    • Author(s)
      田口善弘
    • Organizer
      第7回化粧品開発展
    • Place of Presentation
      ビッグサイト
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Presentation] テンソル分解を用いた教師なし学習による心的外傷後ストレス障害由来の心臓病原因遺伝子の同定2017

    • Author(s)
      田口善弘
    • Organizer
      情報処理学会第51回BIO研究発表会
    • Data Source
      KAKENHI-PROJECT-17K00417
  • [Presentation] FAMSとchooseLDを用いたインシリコ創薬パイプライン2016

    • Author(s)
      田口善弘
    • Organizer
      第13回アカデミックフォーラム
    • Place of Presentation
      ビッグサイト
    • Year and Date
      2016-05-11
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Presentation] microRNA-mRNA interaction identification in Wilms tumor using principal component analysis based unsupervised feature extraction2016

    • Author(s)
      Y-h. Taguchi
    • Organizer
      2016 IEEE 16th International Conference on Bioinformatics and Bioengineering
    • Place of Presentation
      The Splendor Hotel Taichung
    • Year and Date
      2016-10-31
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Presentation] Comprehensive analysis of transcriptome and metabolome analysis in Intrahepatic Cholangiocarcinoma and Hepatocellular Carcinoma2016

    • Author(s)
      Yoshiki Murakami, Shoji Kubo, Akihiro Tamori, Saori Itami, Etsushi Kawamura, Keiko Iwaisako, Kazuo Ikeda, Norifumi Kawada, Takahiro Ochiya and Y-H. Taguchi
    • Organizer
      第5回生命医薬情報学連合大会
    • Place of Presentation
      東京国際交流館プラザ平成
    • Year and Date
      2016-09-29
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Presentation] Principal component analysis based unsupervised feature extraction applied to various bioinformatic analyses2015

    • Author(s)
      Y-h. Taguchi
    • Organizer
      3rd IIT Madras ; Tokyo Tech Joint Symposium on "Algorithms and Applications of Bioinformatics"
    • Place of Presentation
      IIT Madras
    • Year and Date
      2015-11-05
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Presentation] FAMSとchooseLDを用いたインシリコ創薬パイプライン2015

    • Author(s)
      田口善弘・梅山秀明・岩舘満雄
    • Organizer
      ライフサイエンスワールド2015/第12回アカデミックフォーラム
    • Place of Presentation
      ビッグサイト
    • Year and Date
      2015-05-13
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Presentation] Principal component analysis-based unsupervised feature extraction applied to in silico drug discovery for posttraumatic stress disorder-mediated heart disease2015

    • Author(s)
      田口善弘・岩舘満雄・梅山秀明
    • Organizer
      生命医薬情報学連合大会 2015年大会
    • Place of Presentation
      京都大学宇治キャンパスおうばくプラザ
    • Year and Date
      2015-10-29
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Presentation] FAMSとchooseLDを用いたインシリコ創薬パイプライン2015

    • Author(s)
      田口善弘
    • Organizer
      BioJapan2015
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2015-10-14
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Presentation] Apparent microRNA-target-specific histone modification in mammalian spermatogenesis2014

    • Author(s)
      Y-h. Taguchi
    • Organizer
      SIGBIO39
    • Place of Presentation
      Osaka, Japan
    • Year and Date
      2014-09-12
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] MiRaGEサーバを用いた老化関連miRNAの標的遺伝子の発現制御予測2012

    • Author(s)
      田口善弘
    • Organizer
      Biotech2012
    • Place of Presentation
      東京ビッグサイト
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] Gene expression regulation during differentiation from murine ES cells due to microRNA2012

    • Author(s)
      M.Yoshizawa, Y-h.Taguchi
    • Organizer
      CBRC2011
    • Place of Presentation
      生命情報工学研究センター
    • Year and Date
      2012-01-24
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] Comprehensive miRNA expression analysis in peripheral blood can diagnose liver disease2012

    • Author(s)
      Y-h. Taguchi
    • Organizer
      第32回バイオ情報学研究会
    • Place of Presentation
      京都大学
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] Inference of Target Gene Regulation via miRNAs during Cell Senescence by Using the MiRaGE Server2012

    • Author(s)
      Y-h. Taguchi
    • Organizer
      ICIC2012
    • Place of Presentation
      Huangshan, China
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] An application to infer the important miRNAs in a biological process : MiRaGE method2011

    • Author(s)
      Y-h.Taguchi, Jun Yasuda
    • Organizer
      Cell Symposia : Regulatory RNA
    • Place of Presentation
      Wyndham Hotel
    • Year and Date
      2011-11-10
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] Gene expression regulation during differentiation from murine ES cells due to microRNA2011

    • Author(s)
      M.Yoshizawa, Y-h.Taguchi
    • Organizer
      2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops
    • Place of Presentation
      Marriott Atlanta Marquis
    • Year and Date
      2011-11-12
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] Inference of miRNA transfection via gene expression with MiRaGE method2011

    • Author(s)
      Y-h.Taguchi, Jun Yasuda
    • Organizer
      RNA2011
    • Place of Presentation
      京都国際会館
    • Year and Date
      2011-06-14
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] Inference of gene expression regulation by miRNA using MiRaGE method2011

    • Author(s)
      Y-h.Taguchi, J.Yasuda
    • Organizer
      IIT Madras-Tokyo Tech joint Workshop on Bioinformatics and Large Scale Data Analysis
    • Place of Presentation
      IIT Madras(invited)
    • Year and Date
      2011-07-16
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] MiRaGE法を用いたmiRNAによる遺伝子発現制御2011

    • Author(s)
      Y-h.Taguchi, J.Yasuda
    • Organizer
      バイオテクノロジー国際会議
    • Place of Presentation
      東京ビッグサイト
    • Year and Date
      2011-06-30
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] 非計量多次元尺度構成法の生体生命情報解析への応用2008

    • Author(s)
      田口 善弘
    • Organizer
      第36回分子生物情報研究会(SIG-MBI)人工知能学会
    • Place of Presentation
      理化学研究所 横浜研究所
    • Year and Date
      2008-01-11
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Cancer discrimination based upon non-metric multidimensional scaling method2008

    • Author(s)
      Masaru Konno, Y-h. Taguchi
    • Organizer
      16th Annual International Conference Intelligent Systems for Molecular Biology
    • Place of Presentation
      Tront
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Markov random field models for protein function prediction2008

    • Author(s)
      Hisamitsu Akiba, Y-h. Taguchi
    • Organizer
      16th Annual International Conference Intelligent Systems for Molecular Biology
    • Place of Presentation
      Tront
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] GO Term Prediction for UniProt Using Amino Acid Occurrence (invited)2008

    • Author(s)
      Y-h. Taguchi
    • Organizer
      Pepcon2008 : Peptide & Protein Technology : From Concept to Market
    • Place of Presentation
      深セン
    • Year and Date
      2008-04-22
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Estimation of cell cycle regulated genes using anchor genes and non-metric multidimensional scaling2008

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The Sixth Asia Pacific Bioinformatics Conference
    • Place of Presentation
      京都
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] ESTIMATION OF CELL CYCLE REGULATED GENES USING ANCHOR GENES AND NON-METRIC MULTIDIMENSIONAL SCALING2008

    • Author(s)
      Y-h. Taguchi
    • Organizer
      16th Annual International Conference Intelligent Systems for Molecular Biology
    • Place of Presentation
      Tront
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] 非計量多次元尺度構成法の生体生命情報学への応用2008

    • Author(s)
      田口善弘
    • Organizer
      バイオアカデミックフォーラム
    • Place of Presentation
      東京
    • Year and Date
      2008-07-03
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] 非計量多次元尺度構成法の生体生命情報解析への応用2008

    • Author(s)
      田口善弘
    • Organizer
      第36回分子生物情報研究会(SIG-MBI)
    • Place of Presentation
      東京
    • Year and Date
      2008-01-01
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] nMDSを使ったマイクロアレイデータとプロテオミクスデータの比較2008

    • Author(s)
      廣瀬綾子, 田口善弘
    • Organizer
      第18回システムバイオロジー研究会
    • Place of Presentation
      東京
    • Year and Date
      2008-03-14
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008

    • Author(s)
      Fumiaki Kataoka, Y-h. Taguchi
    • Organizer
      The Sixth Asia Pacific Bioinformatics Conference
    • Place of Presentation
      京都
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008

    • Author(s)
      umiaki Kataoka, Y-h. Taguchi
    • Organizer
      16th Annual International Conference Intelligent Systems for Molecular Biology
    • Place of Presentation
      Tront
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Estimation of cell cycle regulated genes using anchor genes and non-metric multidimensional scaling2007

    • Author(s)
      Y-h. Taguchi
    • Organizer
      The 2007 Annual Conference of Japanese Society for Bioinformatics
    • Place of Presentation
      東京
    • Year and Date
      2007-12-17
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Nonmetric distances for Barcode of Life2007

    • Author(s)
      Hisamitsu Akiba, Y-h. Taguchi
    • Organizer
      Eleventh Annual International Conference on Research in Computational Molecura Biology
    • Place of Presentation
      サンフランシスコ
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Gene arrangement for cell division cycle microarray experiments without sinusoidal fittings2007

    • Author(s)
      Kazuhisa Makabe, Y-h. Taguchi
    • Organizer
      Eleventh Annual International Conference on Research in Computational Molecura Biology
    • Place of Presentation
      サンフランシスコ
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] 非計量多次元尺度構成法とその生体生命情報解析への応用2007

    • Author(s)
      田口善弘
    • Organizer
      統計数理研究所研究会非線形科学と統計科学の対話
    • Place of Presentation
      東京
    • Year and Date
      2007-11-27
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Gene expression profile analysis for circadian promoter activities of cyanobacterial bioluminescent reporter strains using non-metric multidimensional scaling2007

    • Author(s)
      Tokitaka Oyama, Hiroshi Ito, Takao Kondo, Y-h. Taguchi
    • Organizer
      Eleventh Annual International Conference on Research in Computational Molecura Biology
    • Place of Presentation
      サンフランシスコ
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Recognition of protein folds using amino acid occurrence2007

    • Author(s)
      Y-h. Taguchi, M. Michael Gromiha
    • Organizer
      Eleventh Annual International Conference on Research in Computational Molecura Biology
    • Place of Presentation
      サンフランシスコ
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2007

    • Author(s)
      Fumiaki Kataoka, Y-h. Taguchi
    • Organizer
      The 2007 Annual Conference of Japanese Society for Bioinformatics
    • Place of Presentation
      東京
    • Year and Date
      2007-12-17
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] 非計量多次元尺度構成法を用いた生体生命情報解析2007

    • Author(s)
      田口善弘
    • Organizer
      バイオアカデミックフォーラム
    • Place of Presentation
      東京
    • Year and Date
      2007-06-21
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Gene Arrangement for Cell Division Cycle Microarray Experiments without Sinusoidal Fittings2007

    • Author(s)
      Kazuhisa Makabe, Y-h. Taguchi
    • Organizer
      Second IAPR Internatiocal Workshop, PRIB2007
    • Place of Presentation
      Sigapore
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Nonmetric Distance for Barcode of Life2007

    • Author(s)
      Hisamitsu Akiba,Y-h. Taguchi
    • Organizer
      Second IAPR Internatiocal Workshop, PRIB2007
    • Place of Presentation
      Singapore
    • Data Source
      KAKENHI-PROJECT-19500254
  • [Presentation] Competitive target gene regulation by promoter methylation and miRNA

    • Author(s)
      Y-h. Taguchi
    • Organizer
      第31回バイオ情報学研究会
    • Place of Presentation
      タワーホール船堀
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] Possible miRNA Coregulation of Target Genes in Brain Regions by Both Differential miRNA Expression and miRNA-Targeting-Specific Promoter Methylation

    • Author(s)
      Y-h. Taguchi
    • Organizer
      ICIC2013
    • Place of Presentation
      Nanning, China
    • Year and Date
      2013-07-28 – 2013-07-31
    • Data Source
      KAKENHI-PROJECT-23300357
  • [Presentation] Integrative Analysis of Gene Expression and Promoter Methylation during Reprogramming of a Non-Small-Cell Lung Cancer Cell Line Using Principal Component Analysis-Based Unsupervised Feature Extraction

    • Author(s)
      Y-h. Taguchi
    • Organizer
      ICIC2014
    • Place of Presentation
      中国・太原市
    • Year and Date
      2014-08-03 – 2014-08-06
    • Data Source
      KAKENHI-PUBLICLY-26120528
  • [Presentation] Possible miRNA coregulation of target genes in brain regions by both differential miRNA expression and miRNA-targeting-specific promoter methylation

    • Author(s)
      Y-h. Taguchi
    • Organizer
      第33回バイオ情報学研究会
    • Place of Presentation
      東北大学
    • Data Source
      KAKENHI-PROJECT-23300357
  • 1.  KATORI Makoto (60202016)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 0 results
  • 2.  MATSUYAMA Touhei (00047200)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 0 results
  • 3.  SUDA Junichiro (40226577)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 0 results
  • 4.  YAMAZAKI Yoshihiro (10349227)
    # of Collaborated Projects: 2 results
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  • 5.  NARITA Hideki (20001662)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 0 results
  • 6.  MATSUSHITA Mitsugu (20091746)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 7.  OYAMA Tokitaka (30324396)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 1 results
  • 8.  YASUDA Jun (00281684)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 7 results
  • 9.  KOSE Katsumi (60186690)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 10.  SONE Toshio (10222077)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 11.  YAMADA Tomomi (50002100)
    # of Collaborated Projects: 1 results
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  • 12.  HACHIKUBO Akihiro (50312450)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 13.  上野 陽太郎 (10016066)
    # of Collaborated Projects: 1 results
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  • 14.  岡本 清美 (40152342)
    # of Collaborated Projects: 1 results
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  • 15.  尾関 之康 (70214137)
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  • 16.  小野 〓郎 (10016165)
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  • 17.  尾関 俊浩 (20301947)
    # of Collaborated Projects: 1 results
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  • 18.  MURAKAMI Yoshiki
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results
  • 19.  KAWAMURA Etsushi
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    # of Collaborated Products: 1 results
  • 20.  AKIYAMA Yutaka
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    # of Collaborated Products: 1 results
  • 21.  SEKIJIMA Masakazu
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  • 22.  WATANABE Eiju
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    # of Collaborated Products: 1 results
  • 23.  DAN Ippeita
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  • 24.  唐沢 康暉
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  • 25.  松原 勤
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  • 26.  宇賀 美奈子
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