Taguchi Y-h. 田口善弘

… Alternative Names

田口善弘タグチヨシヒロ

TAGUCHI Y-h. 田口善弘

TAGUCHI Yoshihiro 田口善弘

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Researcher Number	30206932
Other IDs	https://orcid.org/0000-0003-0867-8986
Affiliation (Current)	2026: 中央大学, 理工学術院, 教授
Affiliation (based on the past Project Information) *help	2017 – 2024: 中央大学, 理工学部, 教授 2011 – 2015: 中央大学, 理工学部, 教授 2006 – 2009: 中央大学, 理工学部, 教授 1997 – 2001: 中央大学, 理工学部, 助教授 1996: 東京工業大学, 理学部, 助手 1991 – 1993: 東京工業大学, 理学部, 助手
Review Section/Research Field	Principal Investigator 物性一般(含基礎論) / Biological Sciences / Basic Section 62010:Life, health and medical informatics-related / Life / Health / Medical informatics / Complex systems / Tumor diagnosis / Bioinformatics/Life informatics / Fluid engineering Except Principal Investigator Meteorology/Physical oceanography/Hydrology / Mathematical physics/Fundamental condensed matter physics
Keywords	Principal Investigator テンソル分解 / 変数選択 / 教師なし学習 / インシリコ創薬 / 教師無し学習 / 前立腺がん / 腎臓がん / 心的外傷後ストレス障害 / ヒストン修飾 / マルチオミックスオミックス … More / マルチオミクス / 一細胞RNA-seq / 主成分分析 / マルチオミックスデータ / 一細胞計測 / 生体生命情報学 / 心臓病 / マルチビューデータ / 乳がん / 社会性昆虫 / AI創薬 / テンソル分解を用いた教師無し学習による変数選択 / エピジェネティクス / ＡＩ創薬 / バイオマーカー / マルチオミックス / 遺伝子発現プロファイル / 非小細胞肺がん / 自己免疫疾患 / 遺伝子発現解析 / 普遍疾患バイオマーカー / マイクロRNA / デング出血熱 / 非小細胞肺がんのエピジェネティック療法 / 心筋細胞の成熟プロセス遺伝子 / 出芽酵母の細胞分裂周期遺伝子 / mRNA-miRNA相互作用 / 世代間エピジェネティックス / 筋萎縮性側索硬化症 / 髄芽腫 / ES細胞 / miRNA / 小脳 / 橋 / 側頭葉 / 前頭葉 / 細胞老化 / プロモーターメチル化 / 精子形成 / gene expression / histone modificatiuon / promoter methylation / microRNA / DNA copy number variation / 細胞分裂周期 / 分裂酵母 / DNA copy number 異常 / 概日周期 / シアノバクテリア / プロテオミクス / DNA copy number異状 / Barcode of Life / マイクロアレイ / ゲノム科学 / 非計量多次元尺度構成法 / 剛体球 / 非弾性衝突球 / 振動層 / 数値計算 / 粉粒体 / 離散要素法 / コルモゴロフ則 / 乱流 / 粉体振動層 … More Except Principal Investigator Depth-hoar crystals / Ice spheres / 3D structures / 3D-Visualization / Snow pack / NMR imaging / しまり雪 / しもざらめ雪 / ざらめ雪 / 三次元構造 / MRI / 可視化 / 積雪 / 核磁気共鳴 / 市町村人口 / 細菌コロニー / 生物物理 / べき乗分布 / 結晶成長 / 細菌 / 対数正規分布 / 複雑系 / フラクタル / スケーリング / コロニー / バクテリア / パターン形成 / 1次転移 / スピングラス / 量子スピン系 / 古典スピン系 / 有限サイズスケ-リング / モンテカルロシミュレ-ション / 界面の方法 / 相転移 Less

Principal component analysis and tensor decomposition based unsuper based feature extraction with the starndard deviation optimizationPrincipal Investigator
- Principal Investigator
  
  田口善弘
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  Chuo University
scRNA-seq analysis using PCA and TD based unsupervised feature extractionPrincipal Investigator
- Principal Investigator
  
  Taguchi Y-h.
- Project Period (FY)
  2020 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  Chuo University
Transomics analysis with tensor decomposition based unsupervised feature extractionPrincipal Investigator
- Principal Investigator
  
  田口善弘
- Project Period (FY)
  2020 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Chuo University
Application of tensor decomposition based unsupervised feature extraction to histone modification analysisPrincipal Investigator
- Principal Investigator
  
  田口善弘
- Project Period (FY)
  2019 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Chuo University
Tensor decomposition based unsupervised feature extraction applied to bioinformaticsPrincipal Investigator
- Principal Investigator
  
  Taguchi Y-h.
- Project Period (FY)
  2017 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  Chuo University
変数選択安定性を重視した変数選択を用いたオミックス疾患バイオマーカー探索Principal Investigator
- Principal Investigator
  
  田口善弘
- Project Period (FY)
  2014 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Chuo University
Development of extensive analyses methods of tumor and cell differentiation related miRNA usingPrincipal Investigator
- Principal Investigator
  
  TAGUCHI Y-h.
- Project Period (FY)
  2011 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Tumor diagnosis
- Research Institution
  Chuo University
Bioinformatics using non-metric multidimensional scaling methodPrincipal Investigator
- Principal Investigator
  
  TAGUCHI Yoshihiro
- Project Period (FY)
  2007 – 2008
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  Chuo University
Formation Mechanism of Growing Random Patterns
- Principal Investigator
  
  MATSUSHITA Mitsugu
- Project Period (FY)
  2006 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Mathematical physics/Fundamental condensed matter physics
- Research Institution
  Chuo University
NMR Imaging of 3-D Snowpack Structures
- Principal Investigator
  
  NARITA Hideki, 尾関俊浩
- Project Period (FY)
  1999 – 2001
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Meteorology/Physical oceanography/Hydrology
- Research Institution
  Hokkaido University
粉粒体の動力学Principal Investigator
- Principal Investigator
  
  田口善弘
- Project Period (FY)
  1997 – 1998
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  物性一般(含基礎論)
- Research Institution
  Chuo University
粉粒体の動力学Principal Investigator
- Principal Investigator
  
  田口善弘
- Project Period (FY)
  1996
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  物性一般(含基礎論)
- Research Institution
  Tokyo Institute of Technology
粉体振動層の動的モデリングPrincipal Investigator
- Principal Investigator
  
  田口善弘
- Project Period (FY)
  1993
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  物性一般(含基礎論)
- Research Institution
  Tokyo Institute of Technology
格子渦管モデルによる流体乱流シミュレーションPrincipal Investigator
- Principal Investigator
  
  田口善弘
- Project Period (FY)
  1992
- Research Category
  
  Grant-in-Aid for Encouragement of Young Scientists (A)
- Research Field
  
  Fluid engineering
- Research Institution
  Tokyo Institute of Technology
相転移に対するモンテカルロ界面的方法の開発と応用
- Principal Investigator
  
  上野陽太郎
- Project Period (FY)
  1991
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Research Institution
  Tokyo Institute of Technology

[Book] 知能とはなにかヒトとAIのあいだ2025
- Author(s)
  田口善弘
- Total Pages
  208
- Publisher
  講談社
- ISBN
  4065384672
- Data Source
  KAKENHI-PROJECT-24K15168
[Book] 砂時計の科学2025
- Author(s)
  田口善弘
- Total Pages
  224
- Publisher
  講談社
- ISBN
  406538267X
- Data Source
  KAKENHI-PROJECT-24K15168
[Book] Unsupervised Feature Extraction Applied to Bioinformatics: A PCA Based and TD Based Approach2024
- Author(s)
  Y-h. Taguchi
- Total Pages
  533
- Publisher
  Springer
- ISBN
  3031609816
- Data Source
  KAKENHI-PROJECT-24K15168
[Book] Machine Learning and IoT Applications for Health Informatics2024
- Author(s)
  Pijush Samui, Sanjiban Sekhar Roy, Wengang Zhang, Y H Taguchi
- Total Pages
  250
- Publisher
  CRC Press
- ISBN
  1032544503
- Data Source
  KAKENHI-PROJECT-24K15168
[Book] はじめての機械学習中学数学でわかるAIのエッセンス2024
- Author(s)
  田口善弘
- Total Pages
  272
- Publisher
  講談社
- ISBN
  9784065239605
- Data Source
  KAKENHI-PROJECT-20K12067
[Book] はじめての機械学習　中学数学でわかるAIのエッセンス2021
- Author(s)
  田口善弘
- Total Pages
  224
- Publisher
  講談社
- ISBN
  9784065239605
- Data Source
  KAKENHI-PROJECT-20K12067
[Book] 生命はデジタルでできている　情報から見た新しい生命像2020
- Author(s)
  田口善弘
- Total Pages
  224
- Publisher
  講談社
- ISBN
  9784065195970
- Data Source
  KAKENHI-PROJECT-20K12067
[Book] Regulatory microRNA2020
- Author(s)
  田口善弘 , 王秀瑛
- Total Pages
  348
- Publisher
  MDPI
- ISBN
  9783038977681
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Book] 生命はデジタルでできている　情報から見た新しい生命像2020
- Author(s)
  田口善弘
- Total Pages
  224
- Publisher
  講談社
- ISBN
  4065195977
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Book] 生命はデジタルでできている　情報から見た新しい生命像2020
- Author(s)
  田口善弘
- Total Pages
  224
- Publisher
  講談社
- ISBN
  4065195977
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Book] Regulatory microRNA2019
- Author(s)
  Y-h. Taguchi, Hsiuying Wang
- Total Pages
  348
- Publisher
  MDPI
- ISBN
  9783038977698
- Data Source
  KAKENHI-PROJECT-17K00417
[Book] Unsupervised Feature Extraction Applied to Bioinformatics A PCA Based and TD Based Approach2019
- Author(s)
  Y-h. Taguchi
- Total Pages
  321
- Publisher
  Springer International
- ISBN
  9783030224554
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Book] Unsupervised Feature Extraction Applied to Bioinformatics: A PCA Based and TD Based Approach2019
- Author(s)
  Y-h. Taguchi
- Total Pages
  321
- Publisher
  Springer International
- ISBN
  9783030224554
- Data Source
  KAKENHI-PROJECT-17K00417
[Book] 高校で教わりたかった物理2009
- Author(s)
  田口善弘
- Total Pages
  170
- Publisher
  日本評論社
- Data Source
  KAKENHI-PROJECT-19500254
[Book] 文庫で読む科学2007
- Author(s)
  田口善弘
- Publisher
  岩波書店
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Novel AI-powered computational method using tensor decomposition for identification of common optimal bin sizes when integrating multiple Hi-C datasets2025
- Author(s)
  Taguchi Y.-H、Turki Turki
- Journal Title
  
  Scientific Reports
  
  Volume: 15 Issue: 1 Pages: 7459-7459
- DOI
  10.1038/s41598-025-91355-8
- Data Source
  KAKENHI-PROJECT-24K15168
[Journal Article] Novel Automatic Classification of Human Adult Lung Alveolar Type II Cells Infected with SARS-CoV-2 through the Deep Transfer Learning Approach2024
- Author(s)
  Turki Turki、Al Habib Sarah、Taguchi Y-h.
- Journal Title
  
  Mathematics
  
  Volume: 12 Issue: 10 Pages: 1573-1573
- DOI
  10.3390/math12101573
- Data Source
  KAKENHI-PROJECT-24K15168
[Journal Article] Tracing ALS Degeneration: Insights from Spinal Cord and Cortex Transcriptomes2024
- Author(s)
  Sneha Nela Pragathi、Dharshini S. Akila Parvathy、Taguchi Y.-h.、Gromiha M. Michael
- Journal Title
  
  Genes
  
  Volume: 15 Issue: 11 Pages: 1431-1431
- DOI
  10.3390/genes15111431
- Data Source
  KAKENHI-PROJECT-24K15168
[Journal Article] maGENEgerZ: An Efficient Artificial Intelligence-Based Framework Can Extract More Expressed Genes and Biological Insights Underlying Breast Cancer Drug Response Mechanism2024
- Author(s)
  Turki Turki、Taguchi Y-h.
- Journal Title
  
  Mathematics
  
  Volume: 12 Issue: 10 Pages: 1536-1536
- DOI
  10.3390/math12101536
- Data Source
  KAKENHI-PROJECT-24K15168
[Journal Article] Novel large empirical study of deep transfer learning for COVID-19 classification based on CT and X-ray images2024
- Author(s)
  Almutaani Mansour、Turki Turki、Taguchi Y.-H.
- Journal Title
  
  Scientific Reports
  
  Volume: 14 Issue: 1 Pages: 26520-26520
- DOI
  10.1038/s41598-024-76498-4
- Data Source
  KAKENHI-PROJECT-24K15168
[Journal Article] Gene Selection of Methionine-Dependent Melanoma and Independent Melanoma by Variable Selection Using Tensor Decomposition2024
- Author(s)
  Kobayashi Kenta、Taguchi Y-h.
- Journal Title
  
  Genes
  
  Volume: 15 Issue: 12 Pages: 1543-1543
- DOI
  10.3390/genes15121543
- Data Source
  KAKENHI-PROJECT-24K15168
[Journal Article] Transcriptome-based analysis for understanding the effects of mutations in neurodegenerative diseases2024
- Author(s)
  Sneha Nela Pragathi、Dharshini S. Akila Parvathy、Taguchi Y-h.、Gromiha M. Michael
- Journal Title
  
  Protein Mutations,
  
  Volume: 1 Pages: 329-360
- DOI
  10.1142/9789811293269_0014
- ISBN
  9789811293252, 9789811293269
- Data Source
  KAKENHI-PROJECT-24K15168
[Journal Article] Novel artificial intelligence-based identification of drug-gene-disease interaction using protein-protein interaction2024
- Author(s)
  Taguchi Y.-h、Turki Turki
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 25 Issue: 1 Pages: 377-377
- DOI
  10.1186/s12859-024-06009-9
- Data Source
  KAKENHI-PROJECT-24K15168
[Journal Article] A new machine learning based computational framework identifies therapeutic targets and unveils influential genes in pancreatic islet cells2023
- Author(s)
  Turki Turki、Taguchi Y-h.
- Journal Title
  
  Gene
  
  Volume: 853 Pages: 147038-147038
- DOI
  10.1016/j.gene.2022.147038
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Principal component analysis- and tensor decomposition-based unsupervised feature extraction to select more suitable differentially methylated cytosines: Optimization of standard deviation versus state-of-the-art methods2023
- Author(s)
  Taguchi Y.-H.、Turki Turki
- Journal Title
  
  Genomics
  
  Volume: 115 Issue: 2 Pages: 110577-110577
- DOI
  10.1016/j.ygeno.2023.110577
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Bioinformatic tools for epitranscriptomics2023
- Author(s)
  Taguchi Y.-H.
- Journal Title
  
  American Journal of Physiology-Cell Physiology
  
  Volume: 324 Issue: 2 Pages: C447-C457
- DOI
  10.1152/ajpcell.00437.2022
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Tensor decomposition discriminates tissues using scATAC-seq2023
- Author(s)
  Taguchi Y.-H.、Turki Turki
- Journal Title
  
  Biochimica et Biophysica Acta (BBA) - General Subjects
  
  Volume: 1867 Issue: 6 Pages: 130360-130360
- DOI
  10.1016/j.bbagen.2023.130360
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Application note: TDbasedUFE and TDbasedUFEadv: bioconductor packages to perform tensor decomposition based unsupervised feature extraction2023
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  Frontiers in Artificial Intelligence
  
  Volume: 6 Pages: 1-1
- DOI
  10.3389/frai.2023.1237542
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Features extracted using tensor decomposition reflect the biological features of the temporal patterns of human blood multimodal metabolome2023
- Author(s)
  Fujita Suguru、Karasawa Yasuaki、Hironaka Ken-ichi、Taguchi Y.-h.、Kuroda Shinya
- Journal Title
  
  PLOS ONE
  
  Volume: 18 Issue: 2 Pages: e0281594-e0281594
- DOI
  10.1371/journal.pone.0281594
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K16578, KAKENHI-PROJECT-18H03979, KAKENHI-PROJECT-21H04759, KAKENHI-ORGANIZER-17H06299, KAKENHI-PLANNED-17H06300, KAKENHI-PROJECT-20K12067
[Journal Article] Optimized Tensor Decomposition and Principal Component Analysis Outperforming State-of-the-Art Methods When Analyzing Histone Modification Chromatin Immunoprecipitation Profiles2023
- Author(s)
  Turki Turki、Roy Sanjiban Sekhar、Taguchi Y.-H.
- Journal Title
  
  Algorithms
  
  Volume: 16 Issue: 9 Pages: 401-401
- DOI
  10.3390/a16090401
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Characterization of circulating <scp>miRNAs</scp> in the treatment of primary liver tumors2023
- Author(s)
  Umezu Tomohiro、Tanaka Shogo、Kubo Shoji、Enomoto Masaru、Tamori Akihiro、Ochiya Takahiro、Taguchi Y.‐H.、Kuroda Masahiko、Murakami Yoshiki
- Journal Title
  
  Cancer Reports
  
  Volume: 7 Issue: 2 Pages: 1-9
- DOI
  10.1002/cnr2.1964
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PROJECT-21K07133, KAKENHI-PROJECT-21H02706
[Journal Article] GENEvaRX: A novel AI-driven method and web tool can identify critical genes and effective drugs for Lichen Planus2023
- Author(s)
  Turki Turki、Taguchi Y-h.
- Journal Title
  
  Engineering Applications of Artificial Intelligence
  
  Volume: 124 Pages: 106607-106607
- DOI
  10.1016/j.engappai.2023.106607
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Integrated Analysis of Gene Expression and Protein?Protein Interaction with Tensor Decomposition2023
- Author(s)
  Taguchi Y-H.、Turki Turki
- Journal Title
  
  Mathematics
  
  Volume: 11 Issue: 17 Pages: 3655-3655
- DOI
  10.3390/math11173655
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Integrated analysis of human DNA methylation, gene expression, and genomic variation in iMETHYL database using kernel tensor decomposition-based unsupervised feature extraction2023
- Author(s)
  Taguchi Y-h.、Komaki Shohei、Sutoh Yoichi、Ohmomo Hideki、Otsuka-Yamasaki Yayoi、Shimizu Atsushi
- Journal Title
  
  PLOS ONE
  
  Volume: 18 Issue: 8 Pages: e0289029-e0289029
- DOI
  10.1371/journal.pone.0289029
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Investigating Neuron Degeneration in Huntington’s Disease Using RNA-Seq Based Transcriptome Study2023
- Author(s)
  Sneha Nela Pragathi、Dharshini S. Akila Parvathy、Taguchi Y.-h.、Gromiha M. Michael
- Journal Title
  
  Genes
  
  Volume: 14 Issue: 9 Pages: 1801-1801
- DOI
  10.3390/genes14091801
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Advanced Tensor Decomposition-Based Integrated Analysis of Protein-Protein Interaction with Cancer Gene Expression Can Improve Coincidence with Clinical Labels2023
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  11th International Conference on Bioinformatics and Computational Biology (ICBCB)
  
  Volume: 1 Pages: 1-2
- DOI
  10.1109/icbcb57893.2023.10246633
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Integrative Meta-Analysis of Huntington’s Disease Transcriptome Landscape2023
- Author(s)
  Sneha Nela Pragathi、Dharshini S. Akila Parvathy、Taguchi Y.-H.、Gromiha M. Michael
- Journal Title
  
  Genes
  
  Volume: 13 Issue: 12 Pages: 2385-2385
- DOI
  10.3390/genes13122385
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] RNA m6A modification and microRNAs2022
- Author(s)
  Taguchi Y.-H.
- Journal Title
  
  Handbook of Machine Learning Applications for Genomics
  
  Volume: 1 Pages: 169-180
- DOI
  10.1016/b978-0-323-89774-7.00020-0
- ISBN
  9780323897747
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] Handbook of Machine Learning Applications for Genomics2022
- Author(s)
  Taguchi Y.-H.
- Journal Title
  
  Handbook of Machine Learning Applications for Genomics
  
  Volume: 1 Pages: 155-176
- Peer Reviewed
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Journal Article] Estimation of Metabolic Effects upon Cadmium Exposure during Pregnancy Using Tensor Decomposition2022
- Author(s)
  Amakura Yuki、Taguchi Y-h.
- Journal Title
  
  Genes
  
  Volume: 13 Issue: 10 Pages: 1698-1698
- DOI
  10.3390/genes13101698
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] Projection in genomic analysis: A theoretical basis to rationalize tensor decomposition and principal component analysis as feature selection tools2022
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  PLOS ONE
  
  Volume: 17 Issue: 9 Pages: e0275472-e0275472
- DOI
  10.1371/journal.pone.0275472
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] Novel feature selection method via kernel tensor decomposition for improved multi-omics data analysis2022
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  BMC Medical Genomics
  
  Volume: 15 Issue: 1 Pages: 37-37
- DOI
  10.1186/s12920-022-01181-4
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Handbook of Machine Learning Applications for Genomics2022
- Author(s)
  Taguchi Y.-H.
- Journal Title
  
  Handbook of Machine Learning Applications for Genomics
  
  Volume: 1 Pages: 155-176
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] A tensor decomposition-based integrated analysis applicable to multiple gene expression profiles without sample matching2022
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  Scientific Reports
  
  Volume: 12 Issue: 1 Pages: 21242-21242
- DOI
  10.1038/s41598-022-25524-4
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] In Silico Drug Discovery Using Tensor Decomposition Based Unsupervised Feature Extraction2022
- Author(s)
  Taguchi Y.-H.
- Journal Title
  
  Handbook of Machine Learning Applications for Genomics
  
  Volume: 1 Pages: 101-120
- DOI
  10.1007/978-981-16-9158-4_7
- ISBN
  9789811691577, 9789811691584
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] Integrated Analysis of Tissue-Specific Gene Expression in Diabetes by Tensor Decomposition Can Identify Possible Associated Diseases2022
- Author(s)
  Taguchi Y-H.、Turki Turki
- Journal Title
  
  Genes
  
  Volume: 13 Issue: 6 Pages: 1097-1097
- DOI
  10.3390/genes13061097
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] Sincle Cell RNA-seq Analysis Using Tensor Decomposition and Principal Component Analysis Based Unsupervised Feature Extraction2022
- Author(s)
  Taguchi Y.-H.
- Journal Title
  
  Handbook of Machine Learning Applications for Genomics
  
  Volume: 1 Pages: 155-176
- DOI
  10.1007/978-981-16-9158-4_11
- ISBN
  9789811691577, 9789811691584
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] Multiomics Data Analysis of Cancers Using Tensor Decomposition and Principal Component Analysis Based Unsupervised Feature Extraction2022
- Author(s)
  Taguchi Y.-H.
- Journal Title
  
  Handbook of Machine Learning Applications for Genomics
  
  Volume: 1 Pages: 1-17
- DOI
  10.1007/978-981-16-9158-4_1
- ISBN
  9789811691577, 9789811691584
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] Suppression of intrahepatic cholangiocarcinoma cell growth by <scp>SKI</scp> via upregulation of the <scp>CDK</scp> inhibitor p212022
- Author(s)
  Kawamura E、Matsubara T、Daikoku A、et al.
- Journal Title
  
  FEBS Open Bio
  
  Volume: 12 Issue: 12 Pages: 2122-2135
- DOI
  10.1002/2211-5463.13489
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K10604, KAKENHI-PROJECT-20K12067, KAKENHI-PROJECT-21K06757, KAKENHI-PROJECT-21K08690, KAKENHI-PROJECT-22K10491, KAKENHI-PROJECT-20K16226, KAKENHI-PROJECT-17K09467, KAKENHI-PROJECT-20K08996, KAKENHI-PUBLICLY-20H04848, KAKENHI-PROJECT-23K21359
[Journal Article] microRNA Bioinformatics2022
- Author(s)
  Taguchi Y-h.
- Journal Title
  
  Cells
  
  Volume: 11 Issue: 22 Pages: 3677-3677
- DOI
  10.3390/cells11223677
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] Adapted tensor decomposition and PCA based unsupervised feature extraction select more biologically reasonable differentially expressed genes than conventional methods2022
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  Scientific Reports
  
  Volume: 12 Issue: 1 Pages: 17438-17438
- DOI
  10.1038/s41598-022-21474-z
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-20H04848
[Journal Article] Identification of genes associated with altered gene expression and m6A profiles during hypoxia using tensor decomposition based unsupervised feature extraction2021
- Author(s)
  Roy Sanjiban Sekhar、Taguchi Y.-H.
- Journal Title
  
  Scientific Reports
  
  Volume: 11 Issue: 1 Pages: 8909-8909
- DOI
  10.1038/s41598-021-87779-7
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] カーネルテンソル分解を用いた教師なし学習による変数選択法～バイオインフォマティクスへの応用～2021
- Author(s)
  田口善弘
- Journal Title
  
  信学技法
  
  Volume: 120(395) Pages: 16-23
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Unsupervised tensor decomposition-based method to extract candidate transcription factors as histone modification bookmarks in post-mitotic transcriptional reactivation2021
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  PLOS ONE
  
  Volume: 16 Issue: 5 Pages: e0251032-e0251032
- DOI
  10.1371/journal.pone.0251032
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] PCA-based unsupervised feature extraction for gene expression analysis of COVID-19 patients2021
- Author(s)
  Fujisawa Kota、Shimo Mamoru、Taguchi Y.-H.、Ikematsu Shinya、Miyata Ryota
- Journal Title
  
  Scientific Reports
  
  Volume: 11 Issue: 1 Pages: 17351-17351
- DOI
  10.1038/s41598-021-95698-w
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Mathematical formulation and application of kernel tensor decomposition based unsupervised feature extraction2021
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  Knowledge-Based Systems
  
  Volume: 217 Pages: 106834-106834
- DOI
  10.1016/j.knosys.2021.106834
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Exploring Common Therapeutic Targets for Neurodegenerative Disorders Using Transcriptome Study2021
- Author(s)
  Dharshini S. Akila Parvathy、Jemimah Sherlyn、Taguchi Y. H.、Gromiha M. Michael
- Journal Title
  
  Frontiers in Genetics
  
  Volume: 12 Pages: 639160-639160
- DOI
  10.3389/fgene.2021.639160
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] Effects of Collagen?Glycosaminoglycan Mesh on Gene Expression as Determined by Using Principal Component Analysis-Based Unsupervised Feature Extraction2021
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  Polymers
  
  Volume: 13 Issue: 23 Pages: 4117-4117
- DOI
  10.3390/polym13234117
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Application of Tensor Decomposition to Gene Expression of Infection of Mouse Hepatitis Virus Can Identify Critical Human Genes and Efffective Drugs for SARS-CoV-2 Infection2021
- Author(s)
  Taguchi Y-H.、Turki Turki
- Journal Title
  
  IEEE Journal of Selected Topics in Signal Processing
  
  Volume: 15 Issue: 3 Pages: 746-758
- DOI
  10.1109/jstsp.2021.3061251
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] カーネルテンソル分解を用いた教師なし学習による変数選択法～バイオインフォマティクスへの応用～2021
- Author(s)
  田口善弘
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2021-BIO-65(2) Pages: 1-9
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Identification of Enhancers and Promoters in the Genome by Multidimensional Scaling2021
- Author(s)
  Ishibashi Ryo、Taguchi Y-h.
- Journal Title
  
  Genes
  
  Volume: 12 Issue: 11 Pages: 1671-1671
- DOI
  10.3390/genes12111671
- Data Source
  KAKENHI-PROJECT-20K12067
[Journal Article] Development of a novel anti-hepatitis B virus agent via Sp12020
- Author(s)
  Hayakawa Michiyo、Umeyama Hideaki、Iwadate Mitsuo、Taguchi Y.-H.、Yano Yoshihiko、Honda Takashi、Itami-Matsumoto Saori、Kozuka Ritsuzo、Enomoto Masaru、Tamori Akihiro、Kawada Norifumi、Murakami Yoshiki
- Journal Title
  
  Scientific Reports
  
  Volume: 10 Issue: 1 Pages: 47-47
- DOI
  10.1038/s41598-019-56842-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
[Journal Article] Conjecturing human genes that are easy to be double strand breaks by tensor decomposition2020
- Author(s)
  Nobuo Hosaka , Y-h. Taguchi
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2020-BIO-62(2) Pages: 1-6
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Journal Article] Identification of Transcription Factors, Biological Pathways, and Diseases as Mediated by N6-methyladenosine Using Tensor Decomposition-Based Unsupervised Feature Extraction2020
- Author(s)
  Taguchi Y-h.、Dharshini S. Akila Parvathy、Gromiha M. Michael
- Journal Title
  
  Applied Sciences
  
  Volume: 11 Issue: 1 Pages: 213-213
- DOI
  10.3390/app11010213
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] テンソル分解に基づく教師なし学習による変数選択のRNAi 処理を行ったプラナリアのRNA-seq解析への適用2020
- Author(s)
  田口善弘 , 鹿島誠
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2020-BIO-62(1) Pages: 1-4
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] 機械学習による遺伝子情報の解析技術と医薬品開発への応用2020
- Author(s)
  田口善弘
- Journal Title
  
  ファームステージ
  
  Volume: 19(11) Pages: 15-20
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Neurological Disorder Drug Discovery from Gene Expression with Tensor Decomposition2020
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  Current Pharmaceutical Design
  
  Volume: 25 Issue: 43 Pages: 4589-4599
- DOI
  10.2174/1381612825666191210160906
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
[Journal Article] Conjecturing human genes that are easy to be double strand breaks by tensor decomposition2020
- Author(s)
  Nobuo Hosaka , Y-h. Taguchi
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2020-BIO-62(2) Pages: 1-6
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] カーネルテンソル分解を用いた教師なし学習による変数選択法～バイオインフォマティクスへの応用～2020
- Author(s)
  田口善弘
- Journal Title
  
  信学技法
  
  Volume: 120(395) Pages: 16-23
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Journal Article] テンソル分解を用いた教師無し学習による変数選択法によるmi RNA/mRNA/プロテオームの統合解析2020
- Author(s)
  田口善弘
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2020-BIO-64(10) Pages: 1-5
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Journal Article] Tensor-Decomposition-Based Unsupervised Feature Extraction Applied to Prostate Cancer Multiomics Data2020
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  Genes
  
  Volume: 11 Issue: 12 Pages: 1493-1493
- DOI
  10.3390/genes11121493
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] テンソル分解を用いた教師無し学習による変数選択法の一細胞RNA-seq解析への応用2020
- Author(s)
  田口善弘
- Journal Title
  
  信学技報
  
  Volume: 119(360) Pages: 55-59
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Incremental Dilations Using CNN for Brain Tumor Classification2020
- Author(s)
  Roy Sanjiban Sekhar、Rodrigues Nishant、Taguchi Y-h.
- Journal Title
  
  Applied Sciences
  
  Volume: 10 Issue: 14 Pages: 4915-4915
- DOI
  10.3390/app10144915
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] 物理学者、機械学習を使う2020
- Author(s)
  田口善弘
- Journal Title
  
  数理科学
  
  Volume: 58(5) Pages: 63-63
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Journal Article] Identifying suitable tools for variant detection and differential gene expression using RNA-seq data2020
- Author(s)
  Dharshini S. Akila Parvathy、Taguchi Y.-H.、Gromiha M. Michael
- Journal Title
  
  Genomics
  
  Volume: 112 Issue: 3 Pages: 2166-2172
- DOI
  10.1016/j.ygeno.2019.12.011
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417, KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] Sp1を標的としたHBVウィルスの新規阻害剤の探索2020
- Author(s)
  早川路代 , 梅山秀明 , 岩舘満雄 , 田口善弘 , 村上善基
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2020-BIO-61(1) Pages: 1-7
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] テンソル分解を用いた教師無し学習による変数選択法によるmiRNA/mRNA/プロテオームの統合解析2020
- Author(s)
  田口善弘
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2020-BIO-64(10) Pages: 1-5
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Universal Nature of Drug Treatment Responses in Drug-Tissue-Wide Model-Animal Experiments Using Tensor Decomposition-Based Unsupervised Feature Extraction2020
- Author(s)
  Taguchi Yh.、Turki Turki
- Journal Title
  
  Frontiers in Genetics
  
  Volume: 11 Pages: 695-695
- DOI
  10.3389/fgene.2020.00695
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] Developing a diagnostic method for latent tuberculosis infection using circulating miRNA2020
- Author(s)
  Hashimoto Shoji、Zhao Hong、Hayakawa Michiyo、Nakajima Koichi、Taguchi Y-h、Murakami Yoshiki
- Journal Title
  
  Translational Medicine Communications
  
  Volume: 5 Issue: 1 Pages: 25-25
- DOI
  10.1186/s41231-020-00078-7
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] A new advanced in silico drug discovery method for novel coronavirus (SARS-CoV-2) with tensor decomposition-based unsupervised feature extraction2020
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  PLOS ONE
  
  Volume: 15 Issue: 9 Pages: 0238907-0238907
- DOI
  10.1371/journal.pone.0238907
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] Unsupervised feature extraction applied to bioinformatics2020
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  Research Outreach
  
  Volume: 115 Issue: 115 Pages: 154-157
- DOI
  10.32907/ro-115-154157
- Open Access
- Data Source
  KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] 対面かオンラインか，それが問題だ2020
- Author(s)
  田口善弘
- Journal Title
  
  Physics Education in University
  
  Volume: 26 Issue: 3 Pages: 115-115
- DOI
  10.11316/peu.26.3_115
- NAID
  130007955957
- ISSN
  1340-993X, 2432-1710
- Year and Date
  2020-11-15
- Language
  Japanese
- Data Source
  KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] 物理学者、機械学習を使う2020
- Author(s)
  田口善弘
- Journal Title
  
  数理科学
  
  Volume: 58(5) Pages: 63-63
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Comprehensive analysis of liver and blood miRNA in precancerous conditions2020
- Author(s)
  Umezu Tomohiro、Tsuneyama Koichi、Kanekura Kohsuke、Hayakawa Michiyo、Tanahashi Toshihito、Kawano Mitsuoki、Taguchi Y-h、Toyoda Hidenori、Tamori Akihiro、Kuroda Masahiko、Murakami Yoshiki
- Journal Title
  
  Scientific Reports
  
  Volume: 10 Issue: 1 Pages: 21766-21766
- DOI
  10.1038/s41598-020-78500-1
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PROJECT-20H03593, KAKENHI-PROJECT-18K07069, KAKENHI-PROJECT-18K07244, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] テンソル分解に基づく教師なし学習による変数選択のRNAi 処理を行ったプラナリアのRNA-seq解析への適用2020
- Author(s)
  田口善弘 , 鹿島誠
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2020-BIO-62(1) Pages: 1-4
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Journal Article] SCGRNs: Novel supervised inference of single-cell gene regulatory networks of complex diseases2020
- Author(s)
  Turki Turki、Taguchi Y-h.
- Journal Title
  
  Computers in Biology and Medicine
  
  Volume: 118 Pages: 103656-103656
- DOI
  10.1016/j.compbiomed.2020.103656
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] カーネルテンソル分解を用いた教師なし学習による変数選択法～バイオインフォマティクスへの応用～2020
- Author(s)
  田口善弘
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2021-BIO-65(2) Pages: 1-9
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Journal Article] Identification of miRNA signatures for kidney renal clear cell carcinoma using the tensor-decomposition method2020
- Author(s)
  Ng Ka-Lok、Taguchi Y.-H.
- Journal Title
  
  Scientific Reports
  
  Volume: 10 Issue: 1 Pages: 15149-15149
- DOI
  10.1038/s41598-020-71997-6
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067, KAKENHI-PUBLICLY-19H05270, KAKENHI-PUBLICLY-20H04848
[Journal Article] Tensor Decomposition Based Unsupervised Feature Extraction Applied to Bioinformatics2019
- Author(s)
  Taguchi Y-h.
- Journal Title
  
  Application of Omics, AI and Blockchain in Bioinformatics Research
  
  Volume: 1 Pages: 159-187
- DOI
  10.1142/9789811203589_0010
- ISBN
  9789811203572, 9789811203589
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] Investigating the energy crisis in Alzheimer disease using transcriptome study2019
- Author(s)
  Dharshini S. Akila Parvathy、Taguchi Y.-h.、Gromiha M. Michael
- Journal Title
  
  Scientific Reports
  
  Volume: 9 Issue: 1 Pages: 18509-18509
- DOI
  10.1038/s41598-019-54782-y
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
[Journal Article] Exploring the selective vulnerability in Alzheimer disease using tissue specific variant analysis2019
- Author(s)
  Akila Parvathy Dharshini S.、Taguchi Y-h.、Michael Gromiha M.
- Journal Title
  
  Genomics
  
  Volume: 111 Issue: 4 Pages: 936-949
- DOI
  10.1016/j.ygeno.2018.05.024
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] 『予備校のノリで学ぶ大学数学』2019
- Author(s)
  田口善弘
- Journal Title
  
  Physics Education in University
  
  Volume: 25 Issue: 2 Pages: 103-104
- DOI
  10.11316/peu.25.2_103
- NAID
  130007690075
- ISSN
  1340-993X, 2432-1710
- Year and Date
  2019-07-15
- Language
  Japanese
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] 『インストールいらずのLATEX入門』2019
- Author(s)
  田口善弘
- Journal Title
  
  Physics Education in University
  
  Volume: 25 Issue: 3 Pages: 147-148
- DOI
  10.11316/peu.25.3_147
- NAID
  130007761447
- ISSN
  1340-993X, 2432-1710
- Year and Date
  2019-11-15
- Language
  Japanese
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Discovery of a Robust Gene Regulatory Network with a Complex Transcription Factor Network on Organ Cancer Cell-line RNA Sequence Data2019
- Author(s)
  Kalbuaji Bharata、Taguchi Y-H.、Konagaya Akihiko
- Journal Title
  
  Chem-Bio Informatics Journal
  
  Volume: 19 Issue: 0 Pages: 32-55
- DOI
  10.1273/cbij.19.32
- NAID
  130007723654
- ISSN
  1347-0442, 1347-6297
- Year and Date
  2019-09-30
- Language
  English
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
[Journal Article] バイオインフォマティクスと倫理・社会2019
- Author(s)
  田口善弘
- Journal Title
  
  信学技報
  
  Volume: 119(329) Pages: 47-50
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Machine learning algorithms for predicting drugs?tissues relationships2019
- Author(s)
  Turki Turki、Taguchi Y-h.
- Journal Title
  
  Expert Systems with Applications
  
  Volume: 127 Pages: 167-186
- DOI
  10.1016/j.eswa.2019.02.013
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] Drug candidate identification based on gene expression of treated cells using tensor decomposition-based unsupervised feature extraction for large-scale data2019
- Author(s)
  Taguchi Y-h.
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 19 Issue: S13 Pages: 338-338
- DOI
  10.1186/s12859-018-2395-8
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] 生物学と物理学2019
- Author(s)
  田口善弘
- Journal Title
  
  窮理
  
  Volume: 12 Pages: 1-9
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] 機械学習のコモディティ化2019
- Author(s)
  田口善弘
- Journal Title
  
  Butsuri
  
  Volume: 74 Issue: 9 Pages: 659-660
- DOI
  10.11316/butsuri.74.9_659
- NAID
  130007807136
- ISSN
  0029-0181, 2423-8872
- Year and Date
  2019-09-05
- Language
  Japanese
- Open Access
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Tensor Decomposition-Based Unsupervised Feature Extraction Applied to Single-Cell Gene Expression Analysis2019
- Author(s)
  Taguchi Y-h.、Turki Turki
- Journal Title
  
  Frontiers in Genetics
  
  Volume: 10 Pages: 864-864
- DOI
  10.3389/fgene.2019.00864
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417, KAKENHI-PUBLICLY-19H05270
[Journal Article] テンソル分解と主成分分解を用いた教師なし学習による社会性昆虫のカーストの脳の遺伝子発現プロファイルとDNAメチル化の解析2019
- Author(s)
  田口善弘
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2019-BIO-58(61) Pages: 1-6
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Multiomics Data Analysis Using Tensor Decomposition Based Unsupervised Feature Extraction2019
- Author(s)
  Taguchi Y-h.
- Journal Title
  
  Intelligent Computing Theories and Application
  
  Volume: 1 Pages: 565-574
- DOI
  10.1007/978-3-030-26763-6_54
- ISBN
  9783030267629, 9783030267636
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] テンソル分解に基づく教師なし学習による変数選択はMicroRNAトランスフェクションにより仲介されるmRNAの配列非特異的オフターゲット調節の普遍的性質を同定することができる2019
- Author(s)
  田口善弘
- Journal Title
  
  情報処理学会研究会報告
  
  Volume: 2019-BIO-59(3) Pages: 1-7
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] テンソル分解を用いた教師なし学習による変数選択法のＴＣＧＡデータベースにおける卵巣がんデータのmicroRNA発現プロファイルとメチル化プロファイルへの適用2019
- Author(s)
  田口善弘 , 呉家樂
- Journal Title
  
  情報処理学会研究報告
  
  Volume: 2019-BIO-60(2) Pages: 1-7
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Journal Article] Tensor decomposition-based and principal-component-analysis-based unsupervised feature extraction applied to the gene expression and methylation profiles in the brains of social insects with multiple castes2018
- Author(s)
  Taguchi Y.-H.
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 19 Issue: S4 Pages: 99-99
- DOI
  10.1186/s12859-018-2068-7
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] Tensor Decomposition?Based Unsupervised Feature Extraction for Integrated Analysis of TCGA Data on MicroRNA Expression and Promoter Methylation of Genes in Ovarian Cancer2018
- Author(s)
  Taguchi Y-h.、Ng Ka-Lok
- Journal Title
  
  IEEE BIBE2018
  
  Volume: 1 Pages: 1-1
- DOI
  10.1109/bibe.2018.00045
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] Identification of candidate drugs using tensor-decomposition-based unsupervised feature extraction in integrated analysis of gene expression between diseases and DrugMatrix datasets2017
- Author(s)
  Taguchi Y.-h.
- Journal Title
  
  Scientific Reports
  
  Volume: 7 Issue: 1 Pages: 13733-13733
- DOI
  10.1038/s41598-017-13003-0
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] Genetic Association between Amyotrophic Lateral Sclerosis and Cancer2017
- Author(s)
  Taguchi Y-h.、Wang Hsiuying
- Journal Title
  
  Genes
  
  Volume: 8 Issue: 10 Pages: 243-243
- DOI
  10.3390/genes8100243
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] One-class Differential Expression Analysis using Tensor Decomposition-based Unsupervised Feature Extraction Applied to Integrated Analysis of Multiple Omics Data from 26 Lung Adenocarcinoma Cell Lines2017
- Author(s)
  Taguchi Y-h.
- Journal Title
  
  BIBE2017
  
  Volume: 1 Pages: 1-12
- DOI
  10.1109/bibe.2017.00-66
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] Tensor decomposition-based unsupervised feature extraction identifies candidate genes that induce post-traumatic stress disorder-mediated heart diseases2017
- Author(s)
  Taguchi Y.-H.
- Journal Title
  
  BMC Medical Genomics
  
  Volume: 10 Issue: S4 Pages: 67-67
- DOI
  10.1186/s12920-017-0302-1
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] Tensor decomposition-based unsupervised feature extraction applied to matrix products for multi-view data processing2017
- Author(s)
  Taguchi Y-h.
- Journal Title
  
  PLOS ONE
  
  Volume: 12 Issue: 8 Pages: e0183933-e0183933
- DOI
  10.1371/journal.pone.0183933
- Data Source
  KAKENHI-PROJECT-17K00417
[Journal Article] Principal component analysis based unsupervised feature extraction applied to publicly available gene expression profiles provides new insights into the mechanisms of action of histone deacetylase inhibitors2016
- Author(s)
  YH. Taguchi
- Journal Title
  
  Neuroepigenetics
  
  Volume: 8 Pages: 1-18
- DOI
  10.1016/j.nepig.2016.10.001
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Principal component analysis based unsupervised feature extraction applied to budding yeast temporally periodic gene expression2016
- Author(s)
  YH Taguchi
- Journal Title
  
  Biodata Mining
  
  Volume: 9 Issue: 1 Pages: 22-22
- DOI
  10.1186/s13040-016-0101-9
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Comparative Gene Expression Analysis of Mouse and Human Cardiac Maturation2016
- Author(s)
  Hideki Uosaki, Y.H Taguchi
- Journal Title
  
  Genomics Proteomics & Bioinformatics
  
  Volume: 14 Issue: 4 Pages: 207-215
- DOI
  10.1016/j.gpb.2016.04.004
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] SFRP1 is a possible candidate for epigenetic therapy in non-small cell lung cancer2016
- Author(s)
  YH Taguchi, Mitsuo Iwadate, Hideaki Umeyama
- Journal Title
  
  BMC Medical Genomics
  
  Volume: 9(Suppl 1) Issue: S1 Pages: 28-28
- DOI
  10.1186/s12920-016-0196-3
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Principal Components Analysis Based Unsupervised Feature Extraction Applied to Gene Expression Analysis of Blood from Dengue Haemorrhagic Fever Patients2016
- Author(s)
  YH. Taguchi
- Journal Title
  
  Scientific reports
  
  Volume: 7 Issue: 1 Pages: 44016-44016
- DOI
  10.1038/srep44016
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] MicroRNA expression in hepatocellular carcinoma after the eradication of chronic hepatitis virus C infection using interferon therapy2016
- Author(s)
  Tamori, A
- Journal Title
  
  Hepatology Res
  
  Volume: 46 Issue: 3 Pages: 26-35
- DOI
  10.1111/hepr.12518
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15K08649, KAKENHI-PROJECT-15K09019, KAKENHI-PUBLICLY-26120528, KAKENHI-PROJECT-15K10194
[Journal Article] Identification of More Feasible MicroRNA-mRNA Interactions within Multiple Cancers Using Principal Component Analysis Based Unsupervised Feature Extraction2016
- Author(s)
  YH Taguchi
- Journal Title
  
  International Journal of Molecular Sciences
  
  Volume: 17(5) Issue: 5 Pages: 696-696
- DOI
  10.3390/ijms17050696
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Heuristic principal component analysis-based unsupervised feature extraction and its application to gene expression analysis of amyotrophic lateral sclerosis data sets2015
- Author(s)
  YH Taguchi, Mitsuo Iwadate, Hideaki Umeyama
- Journal Title
  
  2015 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology
  
  Volume: 0 Pages: 1-10
- DOI
  10.1109/cibcb.2015.7300274
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Comprehensive analysis of transcriptome and metabolome analysis in Intrahepatic Cholangiocarcinoma and Hepatocellular Carcinoma2015
- Author(s)
  Murakami, Y
- Journal Title
  
  Scientific Reports
  
  Volume: 5 Issue: 1 Pages: 16294-16294
- DOI
  10.1038/srep16294
- NAID
  120005820886
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-15K08649, KAKENHI-PROJECT-26461909, KAKENHI-PUBLICLY-26120528
[Journal Article] Principal component analysis-based unsupervised feature extraction applied to in silico drug discovery for posttraumatic stress disorder-mediated heart disease2015
- Author(s)
  YH Taguchi, M Iwadate, H Umeyama
- Journal Title
  
  BMC bioinformatics
  
  Volume: 16(1) Issue: 1 Pages: 139-139
- DOI
  10.1186/s12859-015-0574-4
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Apparent microRNA-Target-specific Histone Modification in Mammalian Spermatogenesis2015
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  Evolutionary Bioinformatics
  
  Volume: 11:Suppl 1 Pages: 13-26
- DOI
  10.4137/ebo.s21832
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-23300357, KAKENHI-PUBLICLY-26120528
[Journal Article] <i>In silico</i> Spleen Tyrosine Kinase Inhibitor Screening by ChooseLD2015
- Author(s)
  H Umeyama, M Iwadate, YH Taguchi
- Journal Title
  
  IPSJ Transactions on Bioinformatics
  
  Volume: 8 Issue: 0 Pages: 14-20
- DOI
  10.2197/ipsjtbio.8.14
- NAID
  130005094264
- ISSN
  1882-6679
- Language
  English
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Identification of aberrant gene expression associated with aberrant promoter methylation in primordial germ cells between E13 and E16 rat F3 generation vinclozolin lineage2015
- Author(s)
  Y-H. Taguchi
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 16(Suppl 18) Issue: S18
- DOI
  10.1186/1471-2105-16-s18-s16
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Identification of potential inhibitors based on compound proposal contest: Tyrosine-protein kinase Yes as a target2015
- Author(s)
  Chiba S, Akiyama Y, Sekijima M.
- Journal Title
  
  Scientific Reports
  
  Volume: 5 Issue: 1 Pages: 1-13
- DOI
  10.1038/srep17209
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-24240044, KAKENHI-PROJECT-15H02776, KAKENHI-PROJECT-15J11261, KAKENHI-PROJECT-25430186, KAKENHI-PROJECT-26730152, KAKENHI-PUBLICLY-26120528
[Journal Article] Exploring effective multiplicity in multichannel functional near-infrared spectroscopy using eigenvalues of correlation matrices.2015
- Author(s)
  Minako Uga, Ippeita Dan, Haruka Dan, Yasushi Kyutoku, Y-h Taguchi, Eiju Watanabe
- Journal Title
  
  Neurophotonics
  
  Volume: 2 Issue: 1 Pages: 015002-015002
- DOI
  10.1117/1.nph.2.1.015002
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-25670625, KAKENHI-PROJECT-25282243, KAKENHI-PUBLICLY-26120528
[Journal Article] Subtype specific promoter methylation in glioblastoma2014
- Author(s)
  Kiyohiko Sakamoto, Y-h Taguchi
- Journal Title
  
  IPSJ SIG Technical Report
  
  Volume: 2014-BIO-38(2) Pages: 1-2
- Acknowledgement Compliant
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Universal disease biomarker: can a fixed set of blood microRNAs diagnose multiple diseases?2014
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  BMC Research Notes
  
  Volume: 7(1) Issue: 1 Pages: 581-581
- DOI
  10.1186/1756-0500-7-581
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Apparent microRNA-target-specific histone modification in mammalian spermatogenesis2014
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  IPSJ SIG Technical Report
  
  Volume: 2014-BIO-39(2) Pages: 1-2
- Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Comparison of Hepatocellular Carcinoma miRNA Expression Profiling as Evaluated by Next Generation Sequencing and Microarray2014
- Author(s)
  Yoshiki Murakami, Toshihito Tanahashi, Rina Okada, Hidenori Toyoda, Takashi Kumada, Masaru Enomoto, Akihiro Tamori, Norifumi Kawada, Y-H Taguchi, Takeshi Azuma
- Journal Title
  
  PLoS ONE
  
  Volume: 9(9) Issue: 12 Pages: e116434-e116434
- DOI
  10.1371/journal.pone.0116434
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Bioinformatic screening of autoimmune disease genes and protein structure prediction with FAMS for drug discovery2014
- Author(s)
  Shigeharu Ishida, Hideaki Umeyama, Mitsuo Iwadate, Y-h. Taguchi
- Journal Title
  
  Protein Pept Lett
  
  Volume: 21(8) Issue: 8 Pages: 823-839
- DOI
  10.2174/09298665113209990052
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PUBLICLY-26120528
[Journal Article] Correlation between miRNA-targeted-gene promoter methylation and miRNA regulation of target genes - See more at: http://f1000research.com/articles/2-21/v3#sthash.46klJq6T.dpuf2013
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  F1000Research
  
  Volume: 2 Pages: 21-21
- DOI
  10.12688/f1000research.2-21.v3
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Possible miRNA coreguｌation of target genes in brain regions by both differential miRNA expression and miRNA-targeting-specific promoter methylation2013
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  IPSJ SIG Technical Reports
  
  Volume: 2013-BIO-33 Pages: 1-6
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Principal component analysis based feature extraction approach to identify circulating microRNA biomarkers2013
- Author(s)
  Y-h. Taguchi, Yoshiki Murakami
- Journal Title
  
  PLoS ONE
  
  Volume: 8 Issue: 6 Pages: e66714-e66714
- DOI
  10.1371/journal.pone.0066714
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] MicroRNA-mediated regulation of target genes in several brain regions is correlated to both microRNA-targeting-specific promoter methylation and differential microRNA expression.2013
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  BioData mining
  
  Volume: 6 Issue: 1 Pages: 11-11
- DOI
  10.1186/1756-0381-6-11
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Competitive target gene regulation by promoter methylation and miRNA2012
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  IPSJ SIG Technical Reports
  
  Volume: 2012-BIO-31 Pages: 1-6
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Inference of target gene regulation via miRNAs during cell senescence by MiRaGE Server2012
- Author(s)
  Y-h.Taguchi
- Journal Title
  
  IPSJ SIG Technical Report
  
  Volume: 2012-BIO-28:3 Pages: 1-6
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] 発現データからmiRNAの働きを予測する2012
- Author(s)
  田口善弘
- Journal Title
  
  実験医学
  
  Volume: 30 Pages: 1327-1332
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Inference of Target Gene Regulation via miRNAs during Cell Senescence by Using the MiRaGE Server2012
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  Aging and Disease
  
  Volume: 3 Pages: 301-306
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Inference of Target Gene Regulation via miRNAs during Cell Senescence by Using the MiRaGE Server2012
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  Communications in Computer and Information Science
  
  Volume: 304 Pages: 441-446
- DOI
  10.1007/978-3-642-31837-5_64
- ISBN
  9783642318368, 9783642318375
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Search of miRNAs critical for medulloblastoma formationusing MiRaGE method2011
- Author(s)
  Y-h.Taguchi, Jun Yasuda
- Journal Title
  
  IPSJ SIG Technical Report
  
  Volume: 2011-BIO-25:5 Pages: 1-6
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Inference of Gene Regulation via miRNAs During ES Cell Differentiation Using MiRaGE Method2011
- Author(s)
  M.Yoshizawa, Y-h.Taguchi, J.Yasuda
- Journal Title
  
  Int.J.Mol.Sci.
  
  Volume: 12 Issue: 12 Pages: 9265-9276
- DOI
  10.3390/ijms12129265
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Gene expression regulation during differentiation from murine ES cells due to microRNA2011
- Author(s)
  M.Yoshizawa, Y-h.Taguchi
- Journal Title
  
  IPSJ SIG Technical Report
  
  Volume: 2011-BIO-25:38 Pages: 1-2
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] MiRaGE : Inference of Gene Expression Regulation via MicroRNA Transfection II2011
- Author(s)
  Y-h.Taguchi, Jun Yasuda
- Journal Title
  
  Lecture Notes in Computer Science
  
  Volume: 6840 Pages: 129-135
- DOI
  10.1007/978-3-642-24553-4_19
- ISBN
  9783642245527, 9783642245534
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23300357
[Journal Article] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008
- Author(s)
  Fumiaki Kataoka, Y-h. Taguchi
- Journal Title
  
  IPSJ SIG Technical Report 2008-BIO-12
  
  Pages: 55-62
- NAID
  110006824832
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Cancer discrimination based upon non-metric multidimensional scaling method2008
- Author(s)
  Masaru Konno, Y-h. Taguchi
- Journal Title
  
  IPSJ SIG Technical Report 2008-BIO-13
  
  Pages: 13-16
- NAID
  110006839042
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008
- Author(s)
  Fumiaki Kataoka, Y-h. Taguchi
- Journal Title
  
  PSJ SIG Technical Report 2008-BIO-12
  
  Pages: 55-62
- NAID
  110006824832
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Nonmetric Distances for Barcode of Life2008
- Author(s)
  Hisamitsu Akiba, Y-h. Taguchi
- Journal Title
  
  IPSJ Transactions on Bioinformatics 1
  
  Pages: 35-41
- NAID
  110006343480
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008
- Author(s)
  Fumiaki Kataoka, Y-h.Taguchi
- Journal Title
  
  IPSJ SIG Technical Report 2008[15]
  
  Pages: 55-61
- NAID
  110006824832
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Markov random field models for protein function prediction2008
- Author(s)
  Hisamitsu Akiba, Y-h. Taguchi
- Journal Title
  
  IPSJ SIG Technical Report 2008-BIO-14
  
  Pages: 51-54
- NAID
  40016268107
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Gene Ontology Term Prediction Based upon Amino Acid Occurrence2008
- Author(s)
  Y-h. Taguchi, M. Michael Gromiha
- Journal Title
  
  2008 International Joint Conference on Neural Networks
  
  Pages: 616-621
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Markov random field models for protein function prediction2008
- Author(s)
  Hisamitsu Akiba, Y-h. Taguchi
- Journal Title
  
  IPST SIG Technical Report 2008-BIO-14
  
  Pages: 51-54
- NAID
  40016268107
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] A Novel Discrimination of GO term Annotated Proteins based on Amino Acid Occurrence and Composition2008
- Author(s)
  Y-h. Taguchi, M. Michael Gromiha
- Journal Title
  
  Pattern Recognition in Bioinformatics, Thirs IAPR Internatiocal Workshop, PRIB2008, Supplementary Proceedings
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] A Novel Discrimination of GO term Annotated Proteins based on Amino Acid Occurrence and Composition, Pattern Recognition in Bioinformatics2008
- Author(s)
  Y-h. Taguchi, M. Michael Gromiha
- Journal Title
  
  Thirs IAPR Internatiocal Workshop, PRIB2008, Supplementary Proccedings
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Application of amino acid occurrence for discriminating different folding types of globular protein2007
- Author(s)
  Y-h. Taguchi, MM Gromiha
- Journal Title
  
  BMC Bioinformatics 8
  
  Pages: 404-404
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Nonmetric distances for Barcode of Life2007
- Author(s)
  Hisamitsu Akiba, Y-h.Taguchi
- Journal Title
  
  IPSJ SIG Technical Report 2007[60]
  
  Pages: 31-38
- NAID
  110006343480
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] A robust measure of correlation between two genes on a microarray using non-metric multidimensional scaling method2007
- Author(s)
  Y-h. Taguchi
- Journal Title
  
  IPSJ SIG Technical Report 2007-BIO-10
  
  Pages: 1-8
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] A robust measure of correlation between two genes on a microarray using non-metric multidimensional scaling method2007
- Author(s)
  Y-h.Taguchi
- Journal Title
  
  IPSJ SIG Technical Report 2007[89]
  
  Pages: 1-8
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Nonmetric distances for Barcode of Life2007
- Author(s)
  Hisamitsu Akiba, Y-h. Taguchi
- Journal Title
  
  IPSJ SIG Technical Report 2007-BIO-9
  
  Pages: 31-38
- NAID
  110006343480
- Data Source
  KAKENHI-PROJECT-19500254
[Journal Article] Protein Fold Recognition based upon the Amino Acid Occurrence2007
- Author(s)
  Y-h. Taguchi, M. Michael Gromiha
- Journal Title
  
  Pattern Recognition in Bioinformatics, Second IAPR Internatiocal WorkshopWorkshop, PRIB2007, Proccedings, Springer 4774
  
  Pages: 120-131
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] TDbasedUFE and TDbasedUFEadv: Bioconductor Packages to Perform Tensor Decomposition based Unsupervised Feature Extraction2024
- Author(s)
  Y-h. Taguchi
- Organizer
  ICBBT2024
- Data Source
  KAKENHI-PROJECT-24K15168
[Presentation] テンソル分解を用いた教師なし学習による変数選択法のバイオインフォマティクスへの応用2024
- Author(s)
  田口善弘
- Organizer
  NGS EXPO 2024
- Data Source
  KAKENHI-PROJECT-24K15168
[Presentation] Application note: TDbasedUFE and TDbasedUFEadv: bioconductor packages to perform tensor decomposition based unsupervised feature extraction2024
- Author(s)
  Y-h. Taguchi
- Organizer
  ISMB2024
- Data Source
  KAKENHI-PROJECT-24K15168
[Presentation] Signal detection from dirty world: signal detection from large dimension, small size, and data using tensor decomposition2024
- Author(s)
  Y-h. Taguchi
- Organizer
  TMME-CAI2024
- Data Source
  KAKENHI-PROJECT-24K15168
[Presentation] TDbasedUFE and TDbasedUFEadv: bioconductor packages to perform tensor decomposition based unsupervised feature extraction2023
- Author(s)
  Y-h. Taguchi
- Organizer
  BiocAsia2023
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Advanced Tensor Decomposition-Based Integrated Analysis of Protein-Protein Interaction with Cancer Gene Expression Can Improve Coincidence with Clinical labels2023
- Author(s)
  YH Taguchi , Turki Turki
- Organizer
  2023 11th International Conference on Bioinformatics and Computational Biology (ICBCB)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Identification of DNA loops in the Genome by Multi-Dimensional Scaling2022
- Author(s)
  Ryo Ishibashi , Y-H. Taguchi
- Organizer
  ISMB2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Identification of DNA loops in the Genome by Multi-Dimensional Scaling2022
- Author(s)
  Ryo Ishibashi , Y-H. Taguchi
- Organizer
  ISMB2022
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] Tensor decomposition and principal component analysis based unsupervised feature extraction with optimized standard deviation applied to gene expression, DNA methylation and histone modification2022
- Author(s)
  Y-H. Taguchi , Ryo Ishibashi
- Organizer
  ISMB2022
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Tensor decomposition and principal component analysis based unsupervised feature extraction with optimized standard deviation applied to gene expression, DNA methylation and histone modification2022
- Author(s)
  Y-H. Taguchi , Ryo Ishibashi
- Organizer
  ISMB2022
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] Application of PCA-based unsupervised feature extraction for gene selection associated with COVID-19 severity2021
- Author(s)
  Mamoru Shimo , Kota Fujisawa , Y-H. Taguchi , Sinya Ikematu , Ryota Miyata
- Organizer
  第10回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Tensor-Decomposition-Based Unsupervised Feature Extraction Applied to Prostate Cancer Multiomics Data2021
- Author(s)
  Y-h. Taguchi
- Organizer
  8th ANNUAL CONGRESS of the European society for translational medicine
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Mathematical formulation and application of kernel tensor decomposition based unsupervised feature extraction2021
- Author(s)
  Y-h. Taguchi , Turki Turki
- Organizer
  第10回生命医薬情報学連合大会
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Projection in genomic analysis: A theoretical basis to rationalize tensor decomposition and principal component analysis as feature selection tools2021
- Author(s)
  Y-h. Taguchi , Turki Turki
- Organizer
  The 20th International Conference on Bioinformatics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] The 20th International Conference on Bioinformatics2021
- Author(s)
  Y-h. Taguchi
- Organizer
  The 3rd International Symposium on Engineering and Technology (ISET 2021)
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Application of Tensor Decomposition based Unsupervised Feature Extraction to Single Cell RNA-seq Data Analysis2020
- Author(s)
  Y-h. Taguchi
- Organizer
  ICBCB2020
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] テンソル分解を用いた教師なし学習による変数選択法を用いたゲノムデータ解析2020
- Author(s)
  田口善弘
- Organizer
  イノベーションジャパン
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] Selecting the genes related to COVID-19 with PCA-based unsupervised feature extraction2020
- Author(s)
  Kota Fujisawa , Mamoru Shimo , Yoshihiro Taguchi , Shinya Ikematu , Ryota Miyata
- Organizer
  ＣＢＩ学会2020年会
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬のリポジショニング2020
- Author(s)
  田口善弘 , Turki Turki
- Organizer
  第43回日本分子生物学会年会
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] テンソル分解を用いた教師無し学習による変数選択法によるmiRNA/mRNA/プロテオームの統合解析2020
- Author(s)
  田口善弘
- Organizer
  情報処理学会バイオ情報学研究会
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Selecting the genes related to COVID-19 with PCA-based unsupervised feature extraction2020
- Author(s)
  Kota Fujisawa , Mamoru Shimo , Yoshihiro Taguchi , Shinya Ikematu , Ryota Miyata
- Organizer
  ＣＢＩ学会2020年会
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬のリポジショニング2020
- Author(s)
  田口善弘
- Organizer
  第43回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] テンソル分解を用いた教師無し学習による変数選択法の一細胞RNA-seq解析への応用2020
- Author(s)
  田口善弘
- Organizer
  電子情報通信学会情報論的学習理論と機械学習 (IBISML) 研究会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] Conjecturing human genes that are easy to be double strand breaks by tensor decomposition2020
- Author(s)
  Nobuo Hosaka , Y-h. Taguchi
- Organizer
  情報処理学会バイオ情報学研究会
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] In silico drug discovery for COVID-19 using gene expression profiles of mouse infected by MHV and those of human cell lines infected by SARS-CoV-22020
- Author(s)
  Y-h. Taguchi
- Organizer
  7th Annual Congress of the European Society for Translational Medicine on Covid-19
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Tensor decomposition based unsupervised Feature Extraction applied to in silico COVID-19 drug siscovery based upon analysis of gene expression profiles altered by SARS-CoV-2 infection2020
- Author(s)
  Y-h. Taguchi
- Organizer
  第九回生命医薬情報学連合大会(IIBMP2020)
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] Identification of Transcription Factors, Biological Pathways, and Diseases as Mediated by N6-methyladenosine using Tensor Decomposition-Based Unsupervised Feature Extraction.2020
- Author(s)
  Y-h. Taguchi , S Akila Parvathy Dharshini , M. Michael , Gromiha
- Organizer
  The 2nd International Symposium on Engineering and Technology (ISET 2020)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] テンソル分解により二本鎖切断になりやすいヒト遺伝子の推定2020
- Author(s)
  保坂伸生 , 田口善弘
- Organizer
  第九回生命医薬情報学連合大会
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] Selecting the genes related to COVID-19 with PCA-based unsupervised feature extraction2020
- Author(s)
  Kota Fujisawa , Mamoru Shimo , Yoshihiro Taguchi , Shinya Ikematu , Ryota Miyata
- Organizer
  ＣＢＩ学会2020年会
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] テンソル分解に基づく教師なし学習による変数選択のRNAi 処理を行ったプラナリアのRNA-seq解析への適用2020
- Author(s)
  田口善弘 , 鹿島誠
- Organizer
  情報処理学会バイオ情報学研究会
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬の探索2020
- Author(s)
  田口善弘
- Organizer
  IBIS2020
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Tensor decomposition based unsupervised Feature Extraction applied to in silico COVID-19 drug siscovery based upon analysis of gene expression profiles altered by SARS-CoV-2 infection2020
- Author(s)
  Y-h. Taguchi
- Organizer
  第九回生命医薬情報学連合大会(IIBMP2020)
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬のリポジショニング2020
- Author(s)
  田口善弘 , Turki Turki
- Organizer
  第43回日本分子生物学会年会
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] カーネルテンソル分解を用いた教師なし学習による変数選択法～バイオインフォマティクスへの応用～2020
- Author(s)
  田口善弘
- Organizer
  情報処理学会バイオ情報学研究会
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Unsupervised tensor decomposition-based method to extract candidate transcription factors as histone modification bookmarks in post-mitotic transcriptional reactivation2020
- Author(s)
  Y-h. Taguchi
- Organizer
  The 19th International Conference on Bioinformatics (InCoB 2020)
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] In silico drug discovery for COVID-19 using gene expression profiles of mouse infected by MHV and those of human cell lines infected by SARS-CoV-22020
- Author(s)
  Y-h. Taguchi
- Organizer
  7th Annual Congress of the European Society for Translational Medicine on Covid-19
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] Repurposing drugs for targeting SARS-Cov-22020
- Author(s)
  Y-h. Taguchi
- Organizer
  IEEE ICBCB2020
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] Application of Tensor Decomposition based Unsupervised Feature Extraction to Single Cell RNA-seq Data Analysis2020
- Author(s)
  Y-h. Taguchi
- Organizer
  IEEE ICBCB2020
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] Principal Component Analysis, Tensor Decomposition, and Kernel Tensor Decomposition Based Unsupervised Feature Extraction Applied to Bioinformatics2020
- Author(s)
  Y-h. Taguchi
- Organizer
  2020 International Symposium on Automation, Information and Computing
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] Principal Component Analysis, Tensor Decomposition, and Kernel Tensor Decomposition Based Unsupervised Feature Extraction Applied to Bioinformatics2020
- Author(s)
  Y-h. Taguchi
- Organizer
  2020 International Symposium on Automation, Information and Computing
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Unsupervised tensor decomposition-based method to extract candidate transcription factors as histone modification bookmarks in post-mitotic transcriptional reactivation2020
- Author(s)
  Y-h. Taguchi
- Organizer
  The 19th International Conference on Bioinformatics (InCoB 2020)
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬の探索2020
- Author(s)
  田口善弘 , Turki Turki
- Organizer
  IBIS2020
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] テンソル分解により二本鎖切断になりやすいヒト遺伝子の推定2020
- Author(s)
  保坂伸生 , 田口善弘
- Organizer
  保坂伸生 , 田口善弘
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] テンソル分解を用いた教師なし学習による変数選択法を用いたゲノムデータ解析2020
- Author(s)
  田口善弘
- Organizer
  イノベーションジャパン
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Tensor decomposition based unsupervised Feature Extraction applied to in silico COVID-19 drug siscovery based upon analysis of gene expression profiles altered by SARS-CoV-2 infection2020
- Author(s)
  田口善弘
- Organizer
  第九回生命医薬情報学連合大会(IIBMP2020)
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] Repurposing drugs for targetting SARS-Cov-22020
- Author(s)
  Y-h. Taguchi
- Organizer
  IEEE ICBCB2020
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] テンソル分解を用いた教師なし学習による変数選択法を用いたゲノムデータ解析2020
- Author(s)
  田口善弘
- Organizer
  イノベーションジャパン
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] Identification of Transcription Factors, Biological Pathways, and Diseases as Mediated by N6-methyladenosine using Tensor Decomposition-Based Unsupervised Feature Extraction.2020
- Author(s)
  Y-h. Taguchi , S Akila Parvathy Dharshini , M. Michael , Gromiha
- Organizer
  The 2nd International Symposium on Engineering and Technology (ISET 2020)
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] Sp1を標的としたHBVウィルスの新規阻害剤の探索2020
- Author(s)
  早川路代 , 梅山秀明 , 岩舘満雄 , 田口善弘 , 村上善基
- Organizer
  情報処理学会第61回BIO研究発表会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] Unsupervised tensor decomposition-based method to extract candidate transcription factors as histone modification bookmarks in post-mitotic transcriptional reactivation2020
- Author(s)
  Y-h. Taguchi
- Organizer
  The 19th International Conference on Bioinformatics (InCoB 2020)
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] In silico drug discovery for COVID-19 using gene expression profiles of mouse infected by MHV and those of human cell lines infected by SARS-CoV-22020
- Author(s)
  Y-h. Taguchi, Turki Turki
- Organizer
  7th Annual Congress of the European Society for Translational Medicine on Covid-19
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] Application of Tensor Decomposition based Unsupervised Feature Extraction to Single Cell RNA-seq Data Analysis2020
- Author(s)
  Y-h. Taguchi
- Organizer
  IEEE ICBCB2020
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] テンソル分解を用いた教師無し学習による変数選択法を用いたCOVID-19治療薬の探索2020
- Author(s)
  田口善弘 , Turki Turki
- Organizer
  IBIS2020
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] カーネルテンソル分解を用いた教師なし学習による変数選択法～バイオインフォマティクスへの応用～2020
- Author(s)
  田口善弘
- Organizer
  情報論的学習理論と機械学習 (IBISML) 研究会
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Principal Component Analysis, Tensor Decomposition, and Kernel Tensor Decomposition Based Unsupervised Feature Extraction Applied to Bioinformatics2020
- Author(s)
  Y-h. Taguchi
- Organizer
  2020 International Symposium on Automation, Information and Computing
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] テンソル分解により二本鎖切断になりやすいヒト遺伝子の推定2020
- Author(s)
  保坂伸生 , 田口善弘
- Organizer
  第九回生命医薬情報学連合大会(IIBMP2020)
- Data Source
  KAKENHI-PROJECT-20K12067
[Presentation] Identification of Transcription Factors, Biological Pathways, and Diseases as Mediated by N6-methyladenosine using Tensor Decomposition-Based Unsupervised Feature Extraction.2020
- Author(s)
  Y-h. Taguchi , S Akila Parvathy Dharshini , M. Michael , Gromiha
- Organizer
  The 2nd International Symposium on Engineering and Technology (ISET 2020)
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H04848
[Presentation] Multiomics Data Analysis Using Tensor Decomposition Based Unsupervised Feature Extraction2019
- Author(s)
  Taguchi Y-h.
- Organizer
  International Conference on Intelligent Computing
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] テンソル分解を用いた教師無し学習による変数選択のマルチオミックスデータ解析への応用2019
- Author(s)
  田口善弘
- Organizer
  第４２回日本分子生物学会年会 2019年12月3日日本分子生物学会
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] Application of tensor decomposition based unsupervised feature extraction to multi- omics data set2019
- Author(s)
  Y-h. Taguchi
- Organizer
  BioInfOMICS2019
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] バイオインフォマティクスと倫理・社会2019
- Author(s)
  田口善弘
- Organizer
  電子情報通信学会技術と社会・倫理研究会
- Invited
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] テンソル分解を用いた教師なし学習による変数選択法のＴＣＧＡデータベースにおける卵巣がんデータのmicroRNA発現プロファイルとメチル化プロファイルへの適用2019
- Author(s)
  田口善弘 , 呉家樂
- Organizer
  情報処理学会第60回BIO研究発表会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] Tensor decomposition based unsupervised feature extraction applied to bioinformatics2019
- Author(s)
  Y-h. Taguchi
- Organizer
  PreMed'19
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] テンソル分解と主成分分解を用いた教師なし学習による社会性昆虫のカーストの脳の遺伝子発現プロファイルとDNAメチル化の解析2019
- Author(s)
  田口善弘
- Organizer
  情報処理学会第58回BIO研究発表会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] テンソル分解に基づく教師なし学習による変数選択はMicroRNAトランスフェクションにより仲介されるmRNAの配列非特異的オフターゲット調節の普遍的性質を同定することができる2019
- Author(s)
  田口善弘
- Organizer
  情報処理学会第59回BIO研究発表会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] Tensor decomposition based unsupervised feature extraction applied to drug discovery from gene expression analysis2019
- Author(s)
  Y-h. Taguchi
- Organizer
  The 5th IITM - Tokyo Tech Joint Symposium titled "Current trends in Bioinformatics: Big data analysis, machine learning and drug design"
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-19H05270
[Presentation] Tensor decomposition/principal component analysis based unsupervised feature extraction applied to brain gene expression and methylation profiles of social insects with multiple castes2018
- Author(s)
  Y-h. Taguchi
- Organizer
  The Sixteenth Asia Pacific Bioinformatics Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] Drug candidate identification based on gene expression of treated cells using tensor decomposition-based unsupervised feature extraction for large-scale data2018
- Author(s)
  Y-h. Taguchi
- Organizer
  InCob2018
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] テンソル分解に基づく1クラスの示差的発現解析による26の肺腺癌細胞株からの複数のオミックスデータの統合解析への適用2018
- Author(s)
  田口善弘
- Organizer
  情報処理学会第53回BIO研究発表会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] マイクロRNAのパスウェイ解析システムの開発2018
- Author(s)
  樋口千洋, 田口善弘
- Organizer
  情報処理学会第53回BIO研究発表会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] Tensor Decomposition Based Unsupervised Feature Extraction for Integrated Analysis of TCGA Data on MicroRNA Expression and Promoter Methylation of Genes in Ovarian Cancer2018
- Author(s)
  YH Taguchi, Ka-Lok Ng
- Organizer
  IEEE BIBE 2018
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] 主成分分析を用いた教師なし学習による筋萎縮性側索硬化症とがんの遺伝的関連性の解明2017
- Author(s)
  田口善弘、王　秀瑛
- Organizer
  情報処理学会第52回バイオ情報学研究会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] One-class Differential Expression Analysis using Tensor Decomposition-based Unsupervised Feature Extraction Applied to Integrated Analysis of Multiple Omics Data from 26 Lung Adenocarcinoma Cell Lines2017
- Author(s)
  Y-h. Taguchi
- Organizer
  2017 IEEE 17th International Conference on Bioinformatics and Bioengineering
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] Tensor decomposition-based unsupervised feature extraction identifies candidate genes that induce post-traumatic stress disorder-mediated heart diseases2017
- Author(s)
  Y-h. Taguchi
- Organizer
  The 16th International Conference on Bioinformatics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] Tensor Decomposition based Unsupervised Feature Extraction Identified universal nature of Sequence-non-specific Off-target Regulation of mRNA Mediated by microRNA Transfection2017
- Author(s)
  Y-h. Taguchi
- Organizer
  The 28th International Conference on Genome Informatics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] 主成分分析を用いた教師なし学習による変数選択のデング出血熱患者血液遺伝子発現プロファイル解析への応用2017
- Author(s)
  田口善弘
- Organizer
  情報処理学会第113回MPS・第50回BIO合同研究発表会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] FAMSとchooseLDを用いたインシリコ創薬パイプライン2017
- Author(s)
  田口善弘
- Organizer
  第７回化粧品開発展
- Place of Presentation
  ビッグサイト
- Data Source
  KAKENHI-PUBLICLY-26120528
[Presentation] テンソル分解を用いた教師なし学習による心的外傷後ストレス障害由来の心臓病原因遺伝子の同定2017
- Author(s)
  田口善弘
- Organizer
  情報処理学会第51回BIO研究発表会
- Data Source
  KAKENHI-PROJECT-17K00417
[Presentation] FAMSとchooseLDを用いたインシリコ創薬パイプライン2016
- Author(s)
  田口善弘
- Organizer
  第13回アカデミックフォーラム
- Place of Presentation
  ビッグサイト
- Year and Date
  2016-05-11
- Data Source
  KAKENHI-PUBLICLY-26120528
[Presentation] microRNA-mRNA interaction identification in Wilms tumor using principal component analysis based unsupervised feature extraction2016
- Author(s)
  Y-h. Taguchi
- Organizer
  2016 IEEE 16th International Conference on Bioinformatics and Bioengineering
- Place of Presentation
  The Splendor Hotel Taichung
- Year and Date
  2016-10-31
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-26120528
[Presentation] Comprehensive analysis of transcriptome and metabolome analysis in Intrahepatic Cholangiocarcinoma and Hepatocellular Carcinoma2016
- Author(s)
  Yoshiki Murakami, Shoji Kubo, Akihiro Tamori, Saori Itami, Etsushi Kawamura, Keiko Iwaisako, Kazuo Ikeda, Norifumi Kawada, Takahiro Ochiya and Y-H. Taguchi
- Organizer
  第5回生命医薬情報学連合大会
- Place of Presentation
  東京国際交流館プラザ平成
- Year and Date
  2016-09-29
- Data Source
  KAKENHI-PUBLICLY-26120528
[Presentation] Principal component analysis based unsupervised feature extraction applied to various bioinformatic analyses2015
- Author(s)
  Y-h. Taguchi
- Organizer
  3rd IIT Madras ; Tokyo Tech Joint Symposium on "Algorithms and Applications of Bioinformatics"
- Place of Presentation
  IIT Madras
- Year and Date
  2015-11-05
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-26120528
[Presentation] FAMSとchooseLDを用いたインシリコ創薬パイプライン2015
- Author(s)
  田口善弘・梅山秀明・岩舘満雄
- Organizer
  ライフサイエンスワールド2015/第12回アカデミックフォーラム
- Place of Presentation
  ビッグサイト
- Year and Date
  2015-05-13
- Data Source
  KAKENHI-PUBLICLY-26120528
[Presentation] Principal component analysis-based unsupervised feature extraction applied to in silico drug discovery for posttraumatic stress disorder-mediated heart disease2015
- Author(s)
  田口善弘・岩舘満雄・梅山秀明
- Organizer
  生命医薬情報学連合大会 2015年大会
- Place of Presentation
  京都大学宇治キャンパスおうばくプラザ
- Year and Date
  2015-10-29
- Data Source
  KAKENHI-PUBLICLY-26120528
[Presentation] FAMSとchooseLDを用いたインシリコ創薬パイプライン2015
- Author(s)
  田口善弘
- Organizer
  BioJapan2015
- Place of Presentation
  パシフィコ横浜
- Year and Date
  2015-10-14
- Data Source
  KAKENHI-PUBLICLY-26120528
[Presentation] Apparent microRNA-target-specific histone modification in mammalian spermatogenesis2014
- Author(s)
  Y-h. Taguchi
- Organizer
  SIGBIO39
- Place of Presentation
  Osaka, Japan
- Year and Date
  2014-09-12
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] MiRaGEサーバを用いた老化関連miRNAの標的遺伝子の発現制御予測2012
- Author(s)
  田口善弘
- Organizer
  Biotech2012
- Place of Presentation
  東京ビッグサイト
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] Gene expression regulation during differentiation from murine ES cells due to microRNA2012
- Author(s)
  M.Yoshizawa, Y-h.Taguchi
- Organizer
  CBRC2011
- Place of Presentation
  生命情報工学研究センター
- Year and Date
  2012-01-24
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] Comprehensive miRNA expression analysis in peripheral blood can diagnose liver disease2012
- Author(s)
  Y-h. Taguchi
- Organizer
  第３２回バイオ情報学研究会
- Place of Presentation
  京都大学
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] Inference of Target Gene Regulation via miRNAs during Cell Senescence by Using the MiRaGE Server2012
- Author(s)
  Y-h. Taguchi
- Organizer
  ICIC2012
- Place of Presentation
  Huangshan, China
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] An application to infer the important miRNAs in a biological process : MiRaGE method2011
- Author(s)
  Y-h.Taguchi, Jun Yasuda
- Organizer
  Cell Symposia : Regulatory RNA
- Place of Presentation
  Wyndham Hotel
- Year and Date
  2011-11-10
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] Gene expression regulation during differentiation from murine ES cells due to microRNA2011
- Author(s)
  M.Yoshizawa, Y-h.Taguchi
- Organizer
  2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops
- Place of Presentation
  Marriott Atlanta Marquis
- Year and Date
  2011-11-12
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] Inference of miRNA transfection via gene expression with MiRaGE method2011
- Author(s)
  Y-h.Taguchi, Jun Yasuda
- Organizer
  RNA2011
- Place of Presentation
  京都国際会館
- Year and Date
  2011-06-14
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] Inference of gene expression regulation by miRNA using MiRaGE method2011
- Author(s)
  Y-h.Taguchi, J.Yasuda
- Organizer
  IIT Madras-Tokyo Tech joint Workshop on Bioinformatics and Large Scale Data Analysis
- Place of Presentation
  IIT Madras(invited)
- Year and Date
  2011-07-16
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] MiRaGE法を用いたmiRNAによる遺伝子発現制御2011
- Author(s)
  Y-h.Taguchi, J.Yasuda
- Organizer
  バイオテクノロジー国際会議
- Place of Presentation
  東京ビッグサイト
- Year and Date
  2011-06-30
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] 非計量多次元尺度構成法の生体生命情報解析への応用2008
- Author(s)
  田口善弘
- Organizer
  第36回分子生物情報研究会(SIG-MBI)人工知能学会
- Place of Presentation
  理化学研究所横浜研究所
- Year and Date
  2008-01-11
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Cancer discrimination based upon non-metric multidimensional scaling method2008
- Author(s)
  Masaru Konno, Y-h. Taguchi
- Organizer
  16th Annual International Conference Intelligent Systems for Molecular Biology
- Place of Presentation
  Tront
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Markov random field models for protein function prediction2008
- Author(s)
  Hisamitsu Akiba, Y-h. Taguchi
- Organizer
  16th Annual International Conference Intelligent Systems for Molecular Biology
- Place of Presentation
  Tront
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] GO Term Prediction for UniProt Using Amino Acid Occurrence (invited)2008
- Author(s)
  Y-h. Taguchi
- Organizer
  Pepcon2008 : Peptide & Protein Technology : From Concept to Market
- Place of Presentation
  深セン
- Year and Date
  2008-04-22
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Estimation of cell cycle regulated genes using anchor genes and non-metric multidimensional scaling2008
- Author(s)
  Y-h. Taguchi
- Organizer
  The Sixth Asia Pacific Bioinformatics Conference
- Place of Presentation
  京都
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] ESTIMATION OF CELL CYCLE REGULATED GENES USING ANCHOR GENES AND NON-METRIC MULTIDIMENSIONAL SCALING2008
- Author(s)
  Y-h. Taguchi
- Organizer
  16th Annual International Conference Intelligent Systems for Molecular Biology
- Place of Presentation
  Tront
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] 非計量多次元尺度構成法の生体生命情報学への応用2008
- Author(s)
  田口善弘
- Organizer
  バイオアカデミックフォーラム
- Place of Presentation
  東京
- Year and Date
  2008-07-03
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] 非計量多次元尺度構成法の生体生命情報解析への応用2008
- Author(s)
  田口善弘
- Organizer
  第36回分子生物情報研究会(SIG-MBI)
- Place of Presentation
  東京
- Year and Date
  2008-01-01
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] nMDSを使ったマイクロアレイデータとプロテオミクスデータの比較2008
- Author(s)
  廣瀬綾子, 田口善弘
- Organizer
  第18回システムバイオロジー研究会
- Place of Presentation
  東京
- Year and Date
  2008-03-14
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008
- Author(s)
  Fumiaki Kataoka, Y-h. Taguchi
- Organizer
  The Sixth Asia Pacific Bioinformatics Conference
- Place of Presentation
  京都
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2008
- Author(s)
  umiaki Kataoka, Y-h. Taguchi
- Organizer
  16th Annual International Conference Intelligent Systems for Molecular Biology
- Place of Presentation
  Tront
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Estimation of cell cycle regulated genes using anchor genes and non-metric multidimensional scaling2007
- Author(s)
  Y-h. Taguchi
- Organizer
  The 2007 Annual Conference of Japanese Society for Bioinformatics
- Place of Presentation
  東京
- Year and Date
  2007-12-17
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Nonmetric distances for Barcode of Life2007
- Author(s)
  Hisamitsu Akiba, Y-h. Taguchi
- Organizer
  Eleventh Annual International Conference on Research in Computational Molecura Biology
- Place of Presentation
  サンフランシスコ
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Gene arrangement for cell division cycle microarray experiments without sinusoidal fittings2007
- Author(s)
  Kazuhisa Makabe, Y-h. Taguchi
- Organizer
  Eleventh Annual International Conference on Research in Computational Molecura Biology
- Place of Presentation
  サンフランシスコ
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] 非計量多次元尺度構成法とその生体生命情報解析への応用2007
- Author(s)
  田口善弘
- Organizer
  統計数理研究所研究会非線形科学と統計科学の対話
- Place of Presentation
  東京
- Year and Date
  2007-11-27
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Gene expression profile analysis for circadian promoter activities of cyanobacterial bioluminescent reporter strains using non-metric multidimensional scaling2007
- Author(s)
  Tokitaka Oyama, Hiroshi Ito, Takao Kondo, Y-h. Taguchi
- Organizer
  Eleventh Annual International Conference on Research in Computational Molecura Biology
- Place of Presentation
  サンフランシスコ
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Recognition of protein folds using amino acid occurrence2007
- Author(s)
  Y-h. Taguchi, M. Michael Gromiha
- Organizer
  Eleventh Annual International Conference on Research in Computational Molecura Biology
- Place of Presentation
  サンフランシスコ
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Analysis of DNA copy number alterations with non-metric multidimensional scaling method2007
- Author(s)
  Fumiaki Kataoka, Y-h. Taguchi
- Organizer
  The 2007 Annual Conference of Japanese Society for Bioinformatics
- Place of Presentation
  東京
- Year and Date
  2007-12-17
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] 非計量多次元尺度構成法を用いた生体生命情報解析2007
- Author(s)
  田口善弘
- Organizer
  バイオアカデミックフォーラム
- Place of Presentation
  東京
- Year and Date
  2007-06-21
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Gene Arrangement for Cell Division Cycle Microarray Experiments without Sinusoidal Fittings2007
- Author(s)
  Kazuhisa Makabe, Y-h. Taguchi
- Organizer
  Second IAPR Internatiocal Workshop, PRIB2007
- Place of Presentation
  Sigapore
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Nonmetric Distance for Barcode of Life2007
- Author(s)
  Hisamitsu Akiba,Y-h. Taguchi
- Organizer
  Second IAPR Internatiocal Workshop, PRIB2007
- Place of Presentation
  Singapore
- Data Source
  KAKENHI-PROJECT-19500254
[Presentation] Competitive target gene regulation by promoter methylation and miRNA
- Author(s)
  Y-h. Taguchi
- Organizer
  第３１回バイオ情報学研究会
- Place of Presentation
  タワーホール船堀
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] Possible miRNA Coregulation of Target Genes in Brain Regions by Both Differential miRNA Expression and miRNA-Targeting-Specific Promoter Methylation
- Author(s)
  Y-h. Taguchi
- Organizer
  ICIC2013
- Place of Presentation
  Nanning, China
- Year and Date
  2013-07-28 – 2013-07-31
- Data Source
  KAKENHI-PROJECT-23300357
[Presentation] Integrative Analysis of Gene Expression and Promoter Methylation during Reprogramming of a Non-Small-Cell Lung Cancer Cell Line Using Principal Component Analysis-Based Unsupervised Feature Extraction
- Author(s)
  Y-h. Taguchi
- Organizer
  ICIC2014
- Place of Presentation
  中国・太原市
- Year and Date
  2014-08-03 – 2014-08-06
- Data Source
  KAKENHI-PUBLICLY-26120528
[Presentation] Possible miRNA coreguｌation of target genes in brain regions by both differential miRNA expression and miRNA-targeting-specific promoter methylation
- Author(s)
  Y-h. Taguchi
- Organizer
  第３３回バイオ情報学研究会
- Place of Presentation
  東北大学
- Data Source
  KAKENHI-PROJECT-23300357

1. KATORI Makoto (60202016)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
2. MATSUYAMA Touhei (00047200)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
3. SUDA Junichiro (40226577)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
4. YAMAZAKI Yoshihiro (10349227)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
5. NARITA Hideki (20001662)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
6. MATSUSHITA Mitsugu (20091746)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. OYAMA Tokitaka (30324396)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
8. YASUDA Jun (00281684)

# of Collaborated Projects: 1 results

# of Collaborated Products: 7 results
9. KOSE Katsumi (60186690)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. SONE Toshio (10222077)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
11. YAMADA Tomomi (50002100)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. HACHIKUBO Akihiro (50312450)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 上野陽太郎 (10016066)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. 岡本清美 (40152342)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. 尾関之康 (70214137)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
16. 小野〓郎 (10016165)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
17. 尾関俊浩 (20301947)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
18. MURAKAMI Yoshiki

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
19. KAWAMURA Etsushi

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
20. AKIYAMA Yutaka

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
21. SEKIJIMA Masakazu

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
22. WATANABE Eiju

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
23. DAN Ippeita

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
24. 唐沢康暉

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
25. 松原勤

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
26. 宇賀美奈子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Taguchi Y-h. 田口 善弘

田口 善弘 タグチ ヨシヒロ

TAGUCHI Y-h. 田口 善弘

TAGUCHI Yoshihiro 田口 善弘

Research Projects

Research Products

Co-Researchers

Principal component analysis and tensor decomposition based unsuper based feature extraction with the starndard deviation optimizationPrincipal Investigator

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scRNA-seq analysis using PCA and TD based unsupervised feature extractionPrincipal Investigator

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Transomics analysis with tensor decomposition based unsupervised feature extractionPrincipal Investigator

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Application of tensor decomposition based unsupervised feature extraction to histone modification analysisPrincipal Investigator

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Tensor decomposition based unsupervised feature extraction applied to bioinformaticsPrincipal Investigator

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変数選択安定性を重視した変数選択を用いたオミックス疾患バイオマーカー探索Principal Investigator

Principal Investigator

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Development of extensive analyses methods of tumor and cell differentiation related miRNA usingPrincipal Investigator

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Bioinformatics using non-metric multidimensional scaling methodPrincipal Investigator

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Formation Mechanism of Growing Random Patterns

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NMR Imaging of 3-D Snowpack Structures

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粉粒体の動力学Principal Investigator

Principal Investigator

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粉粒体の動力学Principal Investigator

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粉体振動層の動的モデリングPrincipal Investigator

Taguchi Y-h. 田口善弘

田口善弘タグチヨシヒロ

TAGUCHI Y-h. 田口善弘

TAGUCHI Yoshihiro 田口善弘

[Book] 知能とはなにかヒトとAIのあいだ2025

[Book] はじめての機械学習中学数学でわかるAIのエッセンス2024

[Book] はじめての機械学習　中学数学でわかるAIのエッセンス2021

[Book] 生命はデジタルでできている　情報から見た新しい生命像2020

[Book] 生命はデジタルでできている　情報から見た新しい生命像2020