Hirose Osamu 広瀬修

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HIROSE Osamu 広瀬修

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Researcher Number	30549671
Other IDs	https://orcid.org/0000-0002-8077-8589
External Links
Affiliation (Current)	2025: 金沢大学, 生命理工学系, 准教授
Affiliation (based on the past Project Information) *help	2021 – 2024: 金沢大学, 生命理工学系, 准教授 2018 – 2020: 金沢大学, 生命理工学系, 助教 2015 – 2017: 金沢大学, 電子情報学系, 助教 2012 – 2013: 金沢大学, 電子情報学系, 助教
Review Section/Research Field	Principal Investigator Perceptual information processing / Basic Section 61030:Intelligent informatics-related / Genome biology
Keywords	Principal Investigator ベイズ推定 / 機械学習 / 高速計算 / 形状位置合わせ / 形状解析 / 人工知能 / 測地線カーネル / ベイズ統計 / 対応点推定 / 形状データ解析 … More / 形状合成 / 画像認識 / 点群レジストレーション / EMアルゴリズム / 神経細胞アトラス / 神経細胞自動アノテーション / イメージレジストレーション / 変分ベイズ推定 / 形状マッチング / 生命画像 / 点群マッチング / 位置合わせ / 細胞名特定 / 細胞画像 / 画像解析 / 時系列解析 / ライブセルイメージングデータ / 4Dライブセルイメージングデータ / マルコフ確率場 / 粒子フィルタ / 物体追跡 / 結合予測 / 判別分析 / 複合糖鎖 / レクチン Less

Automated high-quality 3D shape generationPrincipal Investigator
- Principal Investigator
  
  広瀬修
- Project Period (FY)
  2022 – 2025
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 61030:Intelligent informatics-related
- Research Institution
  Kanazawa University
Automatic Annotation of Neural Cells in C.elegans Imaging DataPrincipal Investigator
- Principal Investigator
  
  Hirose Osamu
- Project Period (FY)
  2017 – 2022
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Perceptual information processing
- Research Institution
  Kanazawa University
Automatic tracking of multiple cell regions in 4D live-cell imaging dataPrincipal Investigator
- Principal Investigator
  
  Hirose Osamu
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Perceptual information processing
- Research Institution
  Kanazawa University
Statistical inference of lectin-carbohydrate bindingPrincipal Investigator
- Principal Investigator
  
  HIROSE Osamu
- Project Period (FY)
  2012 – 2013
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Research Field
  
  Genome biology
- Research Institution
  Kanazawa University

All 2023 2021 2020 2019 2018 2017 2016 2015 2014 2013

All Journal Article Presentation

[Journal Article] Geodesic-Based Bayesian Coherent Point Drift2023
- Author(s)
  Osamu Hirose
- Journal Title
  
  IEEE Transactions on Pattern Analysis and Machine Intelligence
  
  Volume: 45 Pages: 5816-5832
- DOI
  10.1109/tpami.2022.3214191
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K12712, KAKENHI-PROJECT-23K24900
[Journal Article] Acceleration of non-rigid point set registration with downsampling and Gaussian process regression2020
- Author(s)
  Osamu Hirose
- Journal Title
  
  IEEE Transactions on Pattern Analysis and Machine Intelligence
  
  Volume: Early Acess Issue: 8 Pages: 2858-2865
- DOI
  10.1109/tpami.2020.3043769
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K12712
[Journal Article] A Bayesian Formulation of Coherent Point Drift2020
- Author(s)
  Hirose Osamu
- Journal Title
  
  IEEE Transactions on Pattern Analysis and Machine Intelligence
  
  Volume: Early access Issue: 7 Pages: 1-18
- DOI
  10.1109/tpami.2020.2971687
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-17K12712
[Journal Article] SPF-CellTracker: Tracking multiple cells with strongly-correlated moves using a spatial particle filter2017
- Author(s)
  Hirose Osamu、Kawaguchi Shotaro、Tokunaga Terumasa、Toyoshima Yu、Teramoto Takayuki、Kuge Sayuri、Ishihara Takeshi、Iino Yuichi、Yoshida Ryo
- Journal Title
  
  IEEE/ACM Transactions on Computational Biology and Bioinformatics
  
  Volume: - Issue: 6 Pages: 1-1
- DOI
  10.1109/tcbb.2017.2782255
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-26830006, KAKENHI-PUBLICLY-16H01418, KAKENHI-PUBLICLY-17H05970, KAKENHI-PROJECT-15K16021, KAKENHI-PROJECT-17K12712, KAKENHI-PROJECT-17H06113
[Journal Article] Accurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space.2016
- Author(s)
  Toyoshima Y, Tokunaga T, Hirose O, Kanamori M, Teramoto T, Jang MS, Kuge S, Ishihara T, Yoshida R, Iino Y.
- Journal Title
  
  PLoS Comput Biol.
  
  Volume: 12 Issue: 6 Pages: 1-20
- DOI
  10.1371/journal.pcbi.1004970
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PLANNED-25115009, KAKENHI-PLANNED-25115010, KAKENHI-PROJECT-26291069, KAKENHI-PROJECT-15K16021, KAKENHI-PROJECT-26830006, KAKENHI-PUBLICLY-16H01418
[Journal Article] Predicting residue contacts for protein-protein interactions by integration of multiple information2014
- Author(s)
  Tu Kien T. Le, Osamu Hirose, Vu Anh Tran, Thammakorn Saethang, Lan Anh T. Nguyen, Xuan Tho Dang, Duc Luu Ngo, Mamoru Kubo, Yoichi Yamada, Kenji Satou
- Journal Title
  
  Journal of Biomedical Science and Engineering
  
  Volume: 7 Issue: 01 Pages: 28-37
- DOI
  10.4236/jbise.2014.71005
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24810010
[Journal Article] A novel over-sampling method and its application to miRNA prediction2013
- Author(s)
  Xuan Tho Dang, Osamu Hirose, Thammakorn Saethang, Vu Anh Tran, Lan Anh T. Nguyen, Tu Kien T. Le, Mamoru Kubo, Yoichi Yamada, Kenji Satou
- Journal Title
  
  Journal of Biomedical Science and Engineering
  
  Volume: 6 Issue: 02 Pages: 236-248
- DOI
  10.4236/jbise.2013.62a029
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24810010
[Journal Article] TIGAR : transcript isoform abundance estimation method with gapped alignment of RNA-Seq data by variational Bayesian inference2013
- Author(s)
  Naoki Nariai, Osamu Hirose, Kaname Kojima, Masao Nagasaki
- Journal Title
  
  Bioinformatics
  
  Volume: 29 (18) Issue: 18 Pages: 2292-2299
- DOI
  10.1093/bioinformatics/btt381
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24810010, KAKENHI-PROJECT-25730011
[Presentation] Extending Bayesian coherent point drift into function registration2023
- Author(s)
  Osamu Hirose
- Organizer
  Workshop on Computer Vision & AI
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K24900
[Presentation] 形状位置合わせの高速化と形状合成への応用2021
- Author(s)
  広瀬　修
- Organizer
  2021年度統計関連学会連合大会
- Data Source
  KAKENHI-PROJECT-17K12712
[Presentation] 近傍点共変動法の一般化および高速化2020
- Author(s)
  広瀬　修
- Organizer
  医用画像研究会, 信号処理研究会, バイオメトリクス研究会, 画像工学研究会, 情報センシング研究会, メディア工学研究会合同研究会
- Invited
- Data Source
  KAKENHI-PROJECT-17K12712
[Presentation] 点群マッチング問題の正規マルコフ確率場による定式化2019
- Author(s)
  広瀬修
- Organizer
  2019年度統計関連学会連合大会
- Data Source
  KAKENHI-PROJECT-17K12712
[Presentation] 形状事前分布を利用した高速な点群マッチング手法の開発2018
- Author(s)
  広瀬修
- Organizer
  2018年度人工知能学会全国大会
- Data Source
  KAKENHI-PROJECT-17K12712
[Presentation] 統計的形状モデルを利用した大規模点群レジストレーションとその高速化2018
- Author(s)
  広瀬修
- Organizer
  金沢統計シンポ，融合する統計科学
- Data Source
  KAKENHI-PROJECT-17K12712
[Presentation] 形状事前分布を利用した頑健な点群レジストレーション手法の開発2018
- Author(s)
  広瀬修
- Organizer
  2018年度統計関連学会連合大会
- Data Source
  KAKENHI-PROJECT-17K12712
[Presentation] 変位場の滑らかさを前提としない頑健な点群マッチング手法の開発2017
- Author(s)
  広瀬修
- Organizer
  第31回人工知能学会全国大会
- Data Source
  KAKENHI-PROJECT-17K12712
[Presentation] 形状事前分布を利用した頑健な点群マッチング手法の開発2017
- Author(s)
  広瀬修
- Organizer
  第105回人工知能基本問題研究会
- Data Source
  KAKENHI-PROJECT-17K12712
[Presentation] 形状事前分布を利用した 3D 形状復元アルゴリズムの開発2017
- Author(s)
  広瀬修
- Organizer
  情報処理学会第80回全国大会
- Data Source
  KAKENHI-PROJECT-17K12712
[Presentation] 空間粒子フィルタによる多数の細胞の同時追跡2015
- Author(s)
  広瀬修
- Organizer
  第21回IBISML研究会 - 情報論的学習理論と機械学習 (IBISML)
- Place of Presentation
  沖縄研，沖縄科学技術大学院大学
- Year and Date
  2015-06-23
- Data Source
  KAKENHI-PROJECT-15K16021
[Presentation] 空間粒子フィルタによる多数の細胞の同時追跡2015
- Author(s)
  広瀬修
- Organizer
  バイオイメージ・インフォマティクス　ワークショップ 2015
- Place of Presentation
  福岡県，九州大学
- Year and Date
  2015-06-18
- Data Source
  KAKENHI-PROJECT-15K16021
[Presentation] SPF-CellTracker: Multiple cell tracking with strongly-correlated moves using spatial particle filter2015
- Author(s)
  Osamu Hirose
- Organizer
  GIW/InCoB 2016
- Place of Presentation
  Kagaku-Miraikan, Odaiba, Tokyo
- Year and Date
  2015-09-01
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K16021
[Presentation] SPF-CellTracker: Multiple cell tracking with strongly-correlated moves using spatial particle filter2015
- Author(s)
  Osamu Hirose
- Organizer
  Bioimage Informatics 2016
- Place of Presentation
  National Institute of Standards and Technology, Washington DC
- Year and Date
  2015-10-13
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15K16021

1. Kawaguchi Shotaro

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
2. Tokunaga Terumasa

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
3. Yoshida Ryo

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. Toyoshima Yu

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
5. Teramoto Takayuki

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
6. Kuge Sayuri

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
7. Ishihara Takeshi

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
8. Iino Yuichi

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

Hirose Osamu 広瀬 修

HIROSE Osamu 広瀬 修

Research Projects

Research Products

Co-Researchers

Automated high-quality 3D shape generationPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Automatic Annotation of Neural Cells in C.elegans Imaging DataPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Automatic tracking of multiple cell regions in 4D live-cell imaging dataPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Statistical inference of lectin-carbohydrate bindingPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] Geodesic-Based Bayesian Coherent Point Drift2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Acceleration of non-rigid point set registration with downsampling and Gaussian process regression2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] A Bayesian Formulation of Coherent Point Drift2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] SPF-CellTracker: Tracking multiple cells with strongly-correlated moves using a spatial particle filter2017

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Accurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space.2016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Predicting residue contacts for protein-protein interactions by integration of multiple information2014

Author(s)

Journal Title

DOI

Data Source

[Journal Article] A novel over-sampling method and its application to miRNA prediction2013

Author(s)

Journal Title

DOI

Data Source

[Journal Article] TIGAR : transcript isoform abundance estimation method with gapped alignment of RNA-Seq data by variational Bayesian inference2013

Author(s)

Journal Title

DOI

Data Source

[Presentation] Extending Bayesian coherent point drift into function registration2023

Author(s)

Organizer

Data Source

[Presentation] 形状位置合わせの高速化と形状合成への応用2021

Author(s)

Organizer

Data Source

[Presentation] 近傍点共変動法の一般化および高速化2020

Author(s)

Organizer

Hirose Osamu 広瀬修

HIROSE Osamu 広瀬修