HIROSE Yu 広瀬侑

Researcher Number	30616230
Other IDs
Affiliation (Current)	2019 : 豊橋技術科学大学, 工学(系)研究科(研究院), 助教
Affiliation (based on the past Project Information) *help	2013 – 2019 : 豊橋技術科学大学, 工学(系)研究科(研究院), 助教 2014 : 豊橋技術科学大学, 大学院工学研究科, 助教
Review Section/Research Field	Principal Investigator Genome biology / Biophysics / Basic Section 44030:Plant molecular biology and physiology-related Except Principal Investigator Environmental dynamic analysis / Environmental dynamic analysis
Keywords	Principal Investigator シアノバクテリア / フィトクロム / 光合成 / 次世代シークエンサー / 光受容体 / フィコビリソーム / 光スイッチ / オプトジェネティクス / ゲノム / シアノバクテリオクロム … More Except Principal Investigator 海洋酸性化 / 北極海 / 海洋生態系 / メソスケール渦 / 海洋生物 / 国際情報交換 / 海氷減少 / カナダ / 海氷海洋物理モデル / 浮遊性有孔虫 / 海氷融解 / 生態系モデル / Emiliania huxleyi / 円石藻 / セジメントトラップ / セジメントトラップ係留系 Less

Analysis of diverse structural changes in the phycobilisome during chromatic acclimationPrincipal InvestigatorOngoing
- Principal Investigator
  
  広瀬侑
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 44030:Plant molecular biology and physiology-related
- Research Institution
  Toyohashi University of Technology
Development of the photoswitch systems sensing rainbow colorsPrincipal Investigator
- Principal Investigator
  
  Hirose Yuu
- Project Period (FY)
  2015 – 2016
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Biophysics
- Research Institution
  Toyohashi University of Technology
Plankton in polar regions-toward an understanding of their characteristicsOngoing
- Principal Investigator
  
  原田尚美
- Project Period (FY)
  2015 – 2019
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Environmental dynamic analysis
- Research Institution
  Japan Agency for Marine-Earth Science and Technology
Establishment of new omics approach for the comprehensive analysis of the light sensing pathwaysPrincipal Investigator
- Principal Investigator
  
  Hirose Yuu
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Young Scientists (A)
- Research Field
  
  Genome biology
- Research Institution
  Toyohashi University of Technology
Analysis of cyanobacterial chromatic acclimation by next-generation sequencing technologyPrincipal Investigator
- Principal Investigator
  
  HIROSE Yuu
- Project Period (FY)
  2013 – 2014
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Genome biology
- Research Institution
  Toyohashi University of Technology
Catastrophic reduction of sea-ice in the Arctic Ocean - its impact on the marine ecosystems in the polar region-
- Principal Investigator
  
  HARADA Naomi
- Project Period (FY)
  2010 – 2014
- Research Category
  
  Grant-in-Aid for Scientific Research (S)
- Research Field
  
  Environmental dynamic analysis
- Research Institution
  Japan Agency for Marine-Earth Science and Technology

All 2018 2017 2016 2015 2014 2013 Other

All Journal Article Presentation Book

[Book] 生物の科学「遺伝」(微細藻類の多様な魅力：分類，進化，ゲノムから形態，藻類バイオまで)2017
- Author(s)
  広瀬侑、池内昌彦、浴俊彦
- Publisher
  NTS出版
- Data Source
  KAKENHI-PROJECT-15H05578
[Book] 藻類オイル生産技術研究の最前線2013
- Author(s)
  広瀬侑、池内昌彦
- Total Pages
  7
- Publisher
  NTS出版
- Data Source
  KAKENHI-PROJECT-25830130
[Journal Article] Diverse molecular processes of chromatic acclimation in the cyanobacteria phylum.2017
- Author(s)
  Hirose Y., Ikeuchi M. and Eki T.
- Journal Title
  
  Plant Morphol.
  
  Volume : 印刷中
- Open Access / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05578
[Journal Article] Characterization of the Genuine Type 2 Chromatic Acclimation in the Two Geminocystis Cyanobacteria.2017
- Author(s)
  Hirose Y., Misawa N., Yonekawa C., Nagao N., Watanabe M., Ikeuchi M. and Eki T.
- Journal Title
  
  DNA Res.
  
  Volume : 5(14)
- DOI
  10.1093/dnares/dsx011
- Open Access / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15H05578, KAKENHI-PROJECT-15K14486
[Journal Article] Diverse molecular processes of chromatic acclimation in the cyanobacteria phylum.2017
- Author(s)
  Hirose Y., Ikeuchi M. and Eki T.
- Journal Title
  
  Plant Morphol.
  
  Volume : 印刷中
- Open Access / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K14486
[Journal Article] Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools2016
- Author(s)
  Hirose Y., Fujisawa T., Ohtsubo Y., Katayama M., Misawa N., Wakazuki S., Shimura Y., Nakamura Y., Kawachi M., Yoshikawa H., Eki T., and Kanesaki Y.
- Journal Title
  
  J Biotechnol
  
  Volume : 220 Pages : 45-46
- DOI
  10.1016/j.jbiotec.2016.01.011
- Int'l Joint Research / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K07368, KAKENHI-PROJECT-15K07557, KAKENHI-PROJECT-15H05712, KAKENHI-PROJECT-15H05578, KAKENHI-PROJECT-15H04471
[Journal Article] Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering2016
- Author(s)
  Hirose Y., Fujisawa T., Ohtsubo Y., Katayama M., Misawa N., Wakazuki S., Shimura Y., Nakamura Y., Kawachi M., Yoshikawa H., Eki T., and Kanesaki Y.
- Journal Title
  
  J Biotechnol.
  
  Volume : 220 Pages : 51-52
- DOI
  10.1016/j.jbiotec.2015.12.002
- Int'l Joint Research / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K07368, KAKENHI-PROJECT-15H05712, KAKENHI-PROJECT-15H04471, KAKENHI-PROJECT-15H05578, KAKENHI-PROJECT-15K14486, KAKENHI-PROJECT-15K07557
[Journal Article] Complete Genome Sequence of Cyanobacterium Leptolyngbya sp. NIES-37552016
- Author(s)
  Hirose Y., Fujisawa T., Ohtsubo Y., Katayama M., Misawa N., Wakazuki S., Shimura Y., Nakamura Y., Kawachi M., Yoshikawa H., Eki T., and Kanesaki Y.
- Journal Title
  
  Genome Announc
  
  Volume : 4
- DOI
  10.1128/genomea.00090-16
- Open Access / Int'l Joint Research / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K07368, KAKENHI-PROJECT-15K07557, KAKENHI-PROJECT-15H05712, KAKENHI-PROJECT-15H05578, KAKENHI-PROJECT-15H04471
[Journal Article] Complete Genome Sequence of Cyanobacterium Geminocystis sp. Strain NIES-3709, Which Harbors a Phycoerythrin-Rich Phycobilisome.2015
- Author(s)
  Yuu Hirose, Mitsunori Katayama, Yoshiyuki Ohtsubo, Naomi Misawa, Erica Iioka, Wataru Suda, Kenshiro Oshima, Mitsumasa Hanaoka, Kan Tanaka, Toshihiko Eki, Masahiko Ikeuchi, Yo Kikuchi, Makoto Ishida, and Masahira Hattori
- Journal Title
  
  Genome Announc
  
  Volume : 3 Pages : 1-2
- DOI
  10.1128/genomea.00385-15
- Open Access / Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24248061, KAKENHI-PROJECT-25830130, KAKENHI-PUBLICLY-26117707, KAKENHI-PROJECT-25252017, KAKENHI-PROJECT-15H04471
[Journal Article] Complete genome sequence of Rhodovulum sulfidophilum DSM 2351, an extracellular nucleic acids producing bacterium2015
- Author(s)
  Nagao N, Hirose Y, Misawa N, Ohtsubo Y, Umekage S, Kikuchi Y.
- Journal Title
  
  Genome Announc
  
  Volume : 3(2) e00388-15 Pages : 1-2
- DOI
  10.1128/genomea.00388-15
- Open Access / Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25830130, KAKENHI-PROJECT-25252017, KAKENHI-PROJECT-15H04471
[Journal Article] Complete Genome Sequence of Cyanobacterium Geminocystis sp. Strain NIES-3708, Which Performs Type II Complementary Chromatic Acclimation2015
- Author(s)
  Yuu Hirose, Mitsunori Katayama, Yoshiyuki Ohtsubo, Naomi Misawa, Erica Iioka, Wataru Suda, Kenshiro Oshima, Mitsumasa Hanaoka, Kan Tanaka, Toshihiko Eki, Masahiko Ikeuchi, Yo Kikuchi, Makoto Ishida, and Masahira Hattori
- Journal Title
  
  Genome Announc
  
  Volume : 3 Pages : 1-2
- DOI
  10.1128/genomea.00357-15
- Open Access / Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-24248061, KAKENHI-PROJECT-25830130, KAKENHI-PUBLICLY-26117707, KAKENHI-PROJECT-25252017, KAKENHI-PROJECT-15H04471
[Journal Article] Loss of Cytochrom cm Stimulates Cyanobacterial Heterotrophic Growth in the Dark2015
- Author(s)
  Hiraide, Y., Oshima, K., Fujisawa, T., Uesaka, K., Hirose, Y., Tsujimoto, R., Yamamoto, H., Okamoto, S., Nakamura, Y., Terauchi, K., Omata, T., Ihara, K., Hattori, M. and Fujita, Y.
- Journal Title
  
  Plant and Cell Physiolosy
  
  Volume : 57 Pages : 334-345
- DOI
  10.1093/pcp/pcu165
- Open Access / Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23000007, KAKENHI-PROJECT-23570066, KAKENHI-PUBLICLY-26102543, KAKENHI-PROJECT-26660084, KAKENHI-PROJECT-13J02354, KAKENHI-PROJECT-25830130
[Journal Article] Complete genome sequence of Enterococcus mundtii QU 25, an efficient L-(+)-lactic acid-producing bacterium2014
- Author(s)
  Shiwa Y., Yanase H., Hirose Y., Satomi S., Araya-Kojima T., Watanabe S., Zendo T., Chibazakura T., Shimizu-Kadota M., Yoshikawa H., Sonomoto K.
- Journal Title
  
  DNA Research
  
  Volume : in press Pages : 369-77
- DOI
  10.1093/dnares/dsu003
- Open Access / Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25830130
[Journal Article] Draft genome sequence of the ionic liquid-tolerant bacterium Bacillus amyloliquefaciens CMW1.2014
- Author(s)
  Kurata A, Hirose Y, Misawa N, Hurunaka K, Kishimoto N.
- Journal Title
  
  Genome announcements
  
  Volume : 2(5) e01051-14 Pages : 1-2
- DOI
  10.1128/genomea.01051-14
- Open Access / Acknowledgement Compliant / Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25830130, KAKENHI-PROJECT-26870731
[Journal Article] Primary photodynamics of the green/red-absorbing photoswitching regulator of the chromatic adaptation E domain from Fremyella diplosiphon.2013
- Author(s)
  Gottlieb
- Journal Title
  
  Biochemistry
  
  Volume : 52 Pages : 8198-208
- DOI
  10.1021/bi400946q
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370014, KAKENHI-PROJECT-25830130
[Journal Article] Green/red cyanobacteriochromes regulate complementary chromatic acclimation via a protochromic photocycle.2013
- Author(s)
  Hirose, Y.
- Journal Title
  
  Proceedings of the National Academy of Sciences of U. S. A.
  
  Volume : 110 Pages : 4974-4979
- DOI
  10.1073/pnas.1302909110
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-23370014, KAKENHI-PROJECT-25620028, KAKENHI-PROJECT-25830130
[Presentation] 大腸菌の光応答の解析2018
- Author(s)
  広瀬侑
- Organizer
  第１２回長野ミーティング
- Data Source
  KAKENHI-PROJECT-15H05578
[Presentation] Leptolyngbya 属シアノバクテリアの光合成装置の光色応答の解析2017
- Author(s)
  広瀬侑、長尾信義、米川千夏、渡辺麻衣、池内昌彦、浴俊彦
- Organizer
  第１１回日本ゲノム微生物学会年会
- Place of Presentation
  慶應義塾大学湘南藤澤キャンパス
- Year and Date
  2017-03-02
- Data Source
  KAKENHI-PROJECT-15H05578
[Presentation] Leptolyngbya 属シアノバクテリアにおけるフィコエリスロシアニン調節型の補色順化の解析2017
- Author(s)
  広瀬侑、長尾信義、米川千夏、渡辺麻衣、池内昌彦、浴俊彦
- Organizer
  第５８回日本植物生理学会年会
- Place of Presentation
  鹿児島大学郡元キャンパス
- Year and Date
  2017-03-16
- Data Source
  KAKENHI-PROJECT-15H05578
[Presentation] シアノバクテリアのゲノム解析とそれを活用した補色応答現象の理解2016
- Author(s)
  広瀬侑、池内昌彦、浴俊彦
- Organizer
  第８０回日本植物学会年会
- Place of Presentation
  沖縄コンベンションセンター
- Year and Date
  2016-09-16
- Invited
- Data Source
  KAKENHI-PROJECT-15H05578
[Presentation] シアノバクテリアの光スイッチの改良2016
- Author(s)
  広瀬侑
- Organizer
  第１０回長野セミナー
- Place of Presentation
  ラフォーレ倶楽部白馬八方
- Year and Date
  2016-01-24
- Data Source
  KAKENHI-PROJECT-15K14486
[Presentation] シアノバクテリアGeminocystis sp. NIES-3708 および3709 株のゲノム比較2016
- Author(s)
  広瀬侑、大坪嘉行、兼崎友、藤澤貴智、志村遥平、三澤直美、若月幸子、中村保一、河地正伸、池内昌彦、浴俊彦
- Organizer
  第７回日本光合成学会年会
- Place of Presentation
  東京理科大学葛飾キャンパス
- Year and Date
  2016-05-27
- Data Source
  KAKENHI-PROJECT-15H05578
[Presentation] Establishment of the Pipeline for High-throughput Determination of Complete Bacterial Genomes2015
- Author(s)
  Hirose Y., N. Misawa, S. Wakazuki, T. Eki
- Organizer
  The IRAGO conference 2015
- Place of Presentation
  豊橋技術科学大学, 愛知県豊橋市
- Year and Date
  2015-10-22
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-15H05712
[Presentation] モデルシアノバクテリアNostoc punctiformeを用いた光色応答の解析2014
- Author(s)
  広瀬侑, 三澤直美
- Organizer
  第55回日本植物生理学会年会
- Place of Presentation
  富山大学
- Data Source
  KAKENHI-PROJECT-25830130
[Presentation] Miseqを用いたシアノバクテリアの光色応答の解析2014
- Author(s)
  広瀬侑, 三澤直美
- Organizer
  第8回日本ゲノム微生物学会年会
- Place of Presentation
  東京農業大学
- Data Source
  KAKENHI-PROJECT-25830130
[Presentation] NGS時代におけるラン藻ゲノムの協調的解析2013
- Author(s)
  広瀬　侑
- Organizer
  ラン藻の分子生物学2013
- Place of Presentation
  かずさDNA研究所
- Data Source
  KAKENHI-PROJECT-25830130
[Presentation] Analysis of light color response of cyanobacteria using next generation sequencer
- Author(s)
  Y. Hirose, N. Misawa, S. Wakazuki, E. Sakai and T. Eki
- Organizer
  IRAGO conference 2015
- Place of Presentation
  産業技術総合研究所（茨城県つくば市）
- Year and Date
  2014-11-06 – 2014-11-07
- Data Source
  KAKENHI-PROJECT-25830130
[Presentation] Geminocystis属シアノバクテリアに見られる補色応答能の違い
- Author(s)
  広瀬侑、片山光徳、大坪嘉行、三澤直美、飯岡恵里香、須田亙、大島健志朗、華岡光正、田中寛、浴俊彦、池内昌彦、服部正平
- Organizer
  第9回日本ゲノム微生物学会年会
- Place of Presentation
  神戸大学（六甲第二キャンパス）
- Year and Date
  2015-03-06 – 2015-03-08
- Data Source
  KAKENHI-PROJECT-25830130

1. HARADA Naomi (70344281)

# of Collaborated Projects : 2results

# of Collaborated Products : 0results
2. KIMOTO Katsunori (40359162)

# of Collaborated Projects : 2results

# of Collaborated Products : 0results
3. NISHINO Shigeto (10421885)

# of Collaborated Projects : 2results

# of Collaborated Products : 0results
4. KIKUCHI Takashi (30359153)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
5. SHIRAIWA Yoshihiro (40126420)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
6. TANAKA Yuichiro (50357456)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
7. KISHI Michio (90214767)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
8. WATANABE Eiji (50722550)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
9. SUZUKI Iwane (10290909)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
10. ITOH Motoyo (60373453)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
11. YAMAGUCHI Atsushi (50344495)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
12. ONODERA Jonaotaro (50467859)

# of Collaborated Projects : 1results

# of Collaborated Products : 0results
13. EKI Toshihiko (40192512)

# of Collaborated Projects : 1results

# of Collaborated Products : 3results
14. HANAOKA Mitsumasa

# of Collaborated Projects : 0results

# of Collaborated Products : 2results
15. YOSHIKAWA Sinya

# of Collaborated Projects : 0results

# of Collaborated Products : 3results
16. FUJITA Yuichi

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
17. TSUJIMOTO Ryoma

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
18. HIRAIDE Yuto

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
19. 田中寛

# of Collaborated Projects : 0results

# of Collaborated Products : 2results
20. 菊池洋

# of Collaborated Projects : 0results

# of Collaborated Products : 3results
21. 大坪嘉行

# of Collaborated Projects : 0results

# of Collaborated Products : 6results
22. 兼崎友

# of Collaborated Projects : 0results

# of Collaborated Products : 3results
23. 宇梶裕

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
24. 梅影創

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
25. 倉田淳志

# of Collaborated Projects : 0results

# of Collaborated Products : 1results
26. 寺内一姫

# of Collaborated Projects : 0results

# of Collaborated Products : 1results

HIROSE Yu 広瀬 侑

Research Projects

Research Products

Co-Researchers

Analysis of diverse structural changes in the phycobilisome during chromatic acclimationPrincipal InvestigatorOngoing

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Development of the photoswitch systems sensing rainbow colorsPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Plankton in polar regions-toward an understanding of their characteristicsOngoing

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Establishment of new omics approach for the comprehensive analysis of the light sensing pathwaysPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Analysis of cyanobacterial chromatic acclimation by next-generation sequencing technologyPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Catastrophic reduction of sea-ice in the Arctic Ocean - its impact on the marine ecosystems in the polar region-

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Book] 生物の科学「遺伝」(微細藻類の多様な魅力：分類，進化，ゲノムから形態，藻類バイオまで)2017

Author(s)

Publisher

Data Source

[Book] 藻類オイル生産技術研究の最前線2013

Author(s)

Total Pages

Publisher

Data Source

[Journal Article] Diverse molecular processes of chromatic acclimation in the cyanobacteria phylum.2017

Author(s)

Journal Title

Data Source

[Journal Article] Characterization of the Genuine Type 2 Chromatic Acclimation in the Two Geminocystis Cyanobacteria.2017

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Diverse molecular processes of chromatic acclimation in the cyanobacteria phylum.2017

Author(s)

Journal Title

Data Source

[Journal Article] Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools2016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering2016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Complete Genome Sequence of Cyanobacterium Leptolyngbya sp. NIES-37552016

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Complete Genome Sequence of Cyanobacterium Geminocystis sp. Strain NIES-3709, Which Harbors a Phycoerythrin-Rich Phycobilisome.2015

Author(s)

Journal Title

HIROSE Yu 広瀬侑