Shimizu Yuki 清水勇気

Researcher Number	30778064
Other IDs	https://orcid.org/0000-0003-0272-5307
Affiliation (Current)	2025: 国立研究開発法人産業技術総合研究所, 生命工学領域, 研究グループ付
Affiliation (based on the past Project Information) *help	2025: 国立研究開発法人産業技術総合研究所, 生命工学領域, 研究グループ付 2019 – 2024: 国立研究開発法人産業技術総合研究所, 生命工学領域, 研究員 2018: 早稲田大学, 理工学術院, 助教
Review Section/Research Field	Principal Investigator Basic Section 46010:Neuroscience-general-related Except Principal Investigator Basic Section 90120:Biomaterials-related / Basic Section 42040:Laboratory animal science-related / Basic Section 59040:Nutrition science and health science-related
Keywords	Principal Investigator ラジアルグリア / ゼブラフィッシュ / 神経再生 / 比較生物学的アプローチ / トランスクリプトーム解析 / ミューラーグリア / 網膜再生 / 遺伝子発現解析 / 神経幹細胞 / 遺伝子発現比較 … More / メダカ / 比較トランスクリプトーム解析 / 血管再生 / 比較トランスクリプトーム / 瘢痕形成 / 血管新生 / 神経新生 / 中枢神経系 / 組織再生 / 遺伝子発現変動解析 … More Except Principal Investigator 代謝性疾患 / 肥満 / マクロファージ / ナノ医薬 / 感染症 / 創薬 / 疾患モデル / 小型魚類 / MASLD / MASH / 炎症・免疫 / PTSD / 脂質酸化物 / ストレス / 脂肪炎症 / 肝線維化 / 非アルコール性脂肪性肝炎 / ナノメディシン / MASH / MASLD / 脂肪細胞 / メタボリックシンドローム / MASLD (NAFLD) / MASH (NASH) / 線維症 / 肝星細胞 / 慢性炎症 Less

Development of 'Garra rufa', a fish capable of growing in a 37C environment, as a novel human disease model animal
- Principal Investigator
  
  島田康人
- Project Period (FY)
  2025 – 2028
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 42040:Laboratory animal science-related
- Research Institution
  Mie University
ストレスマーカー分子12-HETEを介したPTSD発症機構の解明
- Principal Investigator
  
  七里元督
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 59040:Nutrition science and health science-related
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Anti-fibrotic nanomedicines exploiting macrophage phenotype polarization
- Principal Investigator
  
  戸井田力
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 90120:Biomaterials-related
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Analysis of the molecular mechanisms controlling retinal regeneration in vertebrates through a comparative biological approachPrincipal Investigator
- Principal Investigator
  
  清水勇気
- Project Period (FY)
  2024 – 2026
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 46010:Neuroscience-general-related
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Investigation of the molecular mechanisms regulating adult vertebrate brain regeneration using comparative biological approachesPrincipal Investigator
- Principal Investigator
  
  Shimizu Yuki
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 46010:Neuroscience-general-related
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Macrophage-mediated reprogramming of liver microenvironment for NASH treatment
- Principal Investigator
  
  Toita Riki
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 90120:Biomaterials-related
- Research Institution
  National Institute of Advanced Industrial Science and Technology
Analysis of Molecular Mechanisms Regulating the Regenerative Capacity of the Adult Vertebrate BrainPrincipal Investigator
- Principal Investigator
  
  Shimizu Yuki
- Project Period (FY)
  2018 – 2021
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 46010:Neuroscience-general-related
- Research Institution
  National Institute of Advanced Industrial Science and Technology
  Waseda University

All 2024 2023 2022 2021 2020 2019 2018

All Journal Article Presentation

[Journal Article] Gfap transgenic medaka as a novel reporter line for neural stem cells2022
- Author(s)
  Shimizu Yuki、Kawasaki Takashi、Deguchi Tomonori
- Journal Title
  
  Gene
  
  Volume: 820 Pages: 146213-146213
- DOI
  10.1016/j.gene.2022.146213
- Data Source
  KAKENHI-PROJECT-21K15195
[Journal Article] Stab Wound Injury Model of the Adult Optic Tectum using Zebrafish and Medaka for the Comparative Analysis of Regenerative Capacity2022
- Author(s)
  Shimizu Yuki、Kawasaki Takashi
- Journal Title
  
  Journal of Visualized Experiments
  
  Volume: - Issue: 180
- DOI
  10.3791/63166
- Data Source
  KAKENHI-PROJECT-21K15195
[Journal Article] Differential Regenerative Capacity of the Optic Tectum of Adult Medaka and Zebrafish2021
- Author(s)
  Shimizu Yuki、Kawasaki Takashi
- Journal Title
  
  Frontiers in Cell and Developmental Biology
  
  Volume: 9
- DOI
  10.3389/fcell.2021.686755
- Data Source
  KAKENHI-PROJECT-21K15195
[Journal Article] Transcriptome Analyses Reveal IL6/Stat3 Signaling Involvement in Radial Glia Proliferation After Stab Wound Injury in the Adult Zebrafish Optic Tectum2021
- Author(s)
  Shimizu Yuki、Kiyooka Mariko、Ohshima Toshio
- Journal Title
  
  Frontiers in Cell and Developmental Biology
  
  Volume: 9 Pages: 668408-668408
- DOI
  10.3389/fcell.2021.668408
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K14824
[Journal Article] Histone deacetylase inhibition promotes regenerative neurogenesis after stab wound injury in the adult zebrafish optic tectum2020
- Author(s)
  Kiyooka Mariko、Shimizu Yuki、Ohshima Toshio
- Journal Title
  
  Biochemical and Biophysical Research Communications
  
  Volume: 529 Issue: 2 Pages: 366-371
- DOI
  10.1016/j.bbrc.2020.06.025
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K14824
[Journal Article] Involvement of sonic hedgehog and notch signaling in regenerative neurogenesis in adult zebrafish optic tectum after stab injury2018
- Author(s)
  Ueda Y, Shimizu Y, Shimizu N, Ishitani T, Ohshima T.
- Journal Title
  
  Journal of Comparative Neurology
  
  Volume: 526 Issue: 15 Pages: 2360-2372
- DOI
  10.1002/cne.24489
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-18K14824, KAKENHI-PLANNED-26114006
[Presentation] 比較生物学的アプローチによる脳血管系の再生制御機構の探索2024
- Author(s)
  清水勇気
- Organizer
  第7回ニューロバスキュラー研究会
- Data Source
  KAKENHI-PROJECT-21K15195
[Presentation] 再生能力の異なる生物種を用いた神経再生促進因子の探索2024
- Author(s)
  清水勇気
- Organizer
  第9回四国オープンイノベーションワークショップ
- Data Source
  KAKENHI-PROJECT-21K15195
[Presentation] 比較生物学的アプローチによる神経再生促進因子の探索2024
- Author(s)
  清水勇気
- Organizer
  第17回神経発生討論会・第20回成体脳のニューロン新生懇談会合同大会
- Data Source
  KAKENHI-PROJECT-21K15195
[Presentation] マクロファージ表現型による異物反応と組織修復の制御2023
- Author(s)
  戸井田力, 清水栄子, 北村昌大, 加藤敦史, 山口将吾, 笠原真二郎
- Organizer
  第45回日本バイオマテリアル学会大会
- Data Source
  KAKENHI-PROJECT-21H03833
[Presentation] 異物反応と組織修復の包括的制御を可能にする表面コーティング2023
- Author(s)
  戸井田力, 清水栄子, 北村昌大, 加藤敦史, 山口将吾, 笠原真二郎
- Organizer
  第21回 LS-BT 合同研究発表会
- Data Source
  KAKENHI-PROJECT-21H03833
[Presentation] 再生能力の異なる小型魚類を用いた神経再生促進因子の探索2023
- Author(s)
  清水勇気
- Organizer
  第6回Neuro-Vascular研究会
- Data Source
  KAKENHI-PROJECT-21K15195
[Presentation] Comparative analysis of differential regenerative capacity in the central nervous system of adult medaka and zebrafish2023
- Author(s)
  清水勇気
- Organizer
  第29回小型魚類研究会
- Data Source
  KAKENHI-PROJECT-21K15195
[Presentation] 中枢神経系の再生能力が異なる小型魚類を用いた再生促進因子の探索2022
- Author(s)
  清水勇気
- Organizer
  第8回ゼブラフィッシュ・メダカ創薬研究会
- Data Source
  KAKENHI-PROJECT-21K15195
[Presentation] 再生能の異なる小型魚類を用いた中枢神経系の再生制御機構の探索2022
- Author(s)
  清水勇気
- Organizer
  NGS発生生物学現場の会 2022
- Data Source
  KAKENHI-PROJECT-21K15195
[Presentation] マクロファージ表現型制御による褥瘡治療2021
- Author(s)
  戸井田力, 清水栄子, 姜貞勲
- Organizer
  第37回日本DDS学会
- Data Source
  KAKENHI-PROJECT-21H03833
[Presentation] Comparative analysis of brain injury models using small fish with different regenerative abilities2020
- Author(s)
  清水勇気
- Organizer
  第43回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-18K14824
[Presentation] 小型魚類を用いた脳損傷モデルの作製および組織再生を制御する分子機構の探索2019
- Author(s)
  清水勇気
- Organizer
  第5回ゼブラフィッシュ・メダカ創薬研究会(ZMDD2019)
- Data Source
  KAKENHI-PROJECT-18K14824
[Presentation] Analysis of Shh signaling on radial glia proliferation and differentiation after stab injury in the adult zebrafish optic tectum2018
- Author(s)
  Shimizu Y, Ueda Y, Ohshima T.
- Organizer
  11th Zebrafish Disease Models Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K14824

1. Toita Riki (40611554)

# of Collaborated Projects: 3 results

# of Collaborated Products: 3 results
2. 姜貞勲 (50423512)

# of Collaborated Projects: 2 results

# of Collaborated Products: 1 results
3. 七里元督 (20434780)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. 林崇 (80547472)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. 島田康人 (40378427)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. 臧黎清 (10437105)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. 北村真一 (40448379)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

Shimizu Yuki 清水 勇気

Research Projects

Research Products

Co-Researchers

Development of 'Garra rufa', a fish capable of growing in a 37C environment, as a novel human disease model animal

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

ストレスマーカー分子12-HETEを介したPTSD発症機構の解明

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Anti-fibrotic nanomedicines exploiting macrophage phenotype polarization

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Analysis of the molecular mechanisms controlling retinal regeneration in vertebrates through a comparative biological approachPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Investigation of the molecular mechanisms regulating adult vertebrate brain regeneration using comparative biological approachesPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Macrophage-mediated reprogramming of liver microenvironment for NASH treatment

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Analysis of Molecular Mechanisms Regulating the Regenerative Capacity of the Adult Vertebrate BrainPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] Gfap transgenic medaka as a novel reporter line for neural stem cells2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Stab Wound Injury Model of the Adult Optic Tectum using Zebrafish and Medaka for the Comparative Analysis of Regenerative Capacity2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Differential Regenerative Capacity of the Optic Tectum of Adult Medaka and Zebrafish2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Transcriptome Analyses Reveal IL6/Stat3 Signaling Involvement in Radial Glia Proliferation After Stab Wound Injury in the Adult Zebrafish Optic Tectum2021

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Histone deacetylase inhibition promotes regenerative neurogenesis after stab wound injury in the adult zebrafish optic tectum2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Involvement of sonic hedgehog and notch signaling in regenerative neurogenesis in adult zebrafish optic tectum after stab injury2018

Author(s)

Journal Title

DOI

Data Source

[Presentation] 比較生物学的アプローチによる脳血管系の再生制御機構の探索2024

Author(s)

Organizer

Data Source

Shimizu Yuki 清水勇気

[Presentation] 小型魚類を用いた脳損傷モデルの作製および組織再生を制御する分子機構の探索2019