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UEDA Ryu  上田 龍

ORCIDConnect your ORCID iD *help
Researcher Number 40353429
Other IDs
Affiliation (based on the past Project Information) *help 2009: 国立遺伝学研究所, 系統生物センター, 教授
2002 – 2009: 国立遺伝学研究所, 系統生物研究センター, 教授
Review Section/Research Field
Principal Investigator
Biological Sciences
Except Principal Investigator
Biological Sciences
Keywords
Principal Investigator
RNAi / functional genomics / gene function analysis / mutant fly bank / Drosophila / ゲノム機能 / ショウジョウバエ / 発生・分化 / 昆虫 / ゲノム … More / 遺伝学 / ゲノム機能解析 / 遺伝子機能解析 / 変異体バンク / ショジョバエ … More
Except Principal Investigator
ゲノム / ショウジョウバエ / RNAi / 表現型情報 / GAL4-UASシステム / GSベクター / GS系統 / Gene Searchシステム / 強制発現変異体 / 強制発現ベクター / カスパーゼシグナリング / インスリンシグナリング / 翅 / 強制発現システム / 遺伝子強制 / ライブイメージング / 組織サイズ / 画像データ / ストレス感受性 / 形態 / 遺伝子強制発現 / データベース / 表現型 / 遺伝子 / 形質転換 / インバートリピート / 変異体ライブラリ Less
  • Research Projects

    (3 results)
  • Research Products

    (41 results)
  • Co-Researchers

    (4 People)
  •  Systems genomics in Drosophila

    • Principal Investigator
      AIGAKI Toshiro
    • Project Period (FY)
      2005 – 2009
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      Tokyo Metropolitan University
  •  Functional Genomics by comprehensive RNAi mutant fly bank in DrosophilaPrincipal Investigator

    • Principal Investigator
      UEDA Ryu
    • Project Period (FY)
      2003 – 2004
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      National Institute of Genetics
  •  RNAiを用いたショウジョウバエ変異体ライブラリーの構築

    • Principal Investigator
      SAIGO Kaoru
    • Project Period (FY)
      2002
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      The University of Tokyo

All 2009 2008 2007 2006 2005 2004 2003 2002 Other

All Journal Article

  • [Journal Article] Autophagic control of listeria through intracellular innate immune recognition in Drosophila.2009

    • Author(s)
      Yano, T., Mita, S., Ohmori, H., Oshima, Y., Fujimoto, Y., Ueda, R., Takada, H., Goldman, WE., Fukase, K., Silverman, N., Yoshimori, T., Kurata, S.
    • Journal Title

      at Immunol 9(8)

      Pages: 908-916

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] RNAi-Mediated Knockdown Showing Impaired Cell Survival in Drosophila Wing Imaginal Disc2009

    • Author(s)
      Umemori, M., Habara, O., Iwata, T., Maeda, K., Nishinoue, K., Okabe, A., Takemura, M., Takahashi, K., Saigo, K., Ueda, R., Adachi-Yamada, T.
    • Journal Title

      Gene Regulation and Systems Biology 3

      Pages: 11-20

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Aberrant E2F activation by polyglutamine expansion of androgen receptor in SBMA neurotoxicity.2009

    • Author(s)
      Suzuki, E., Zhao Y., Ito, S., Sawatsubashi, S., Murata, T., Furutani, T., Shirode, Y., Yamagata, K., Tanabe, M., Kimura, S., Ueda, T., Fujiyama, S., Lim, J., Matsukawa, H., Kouzmenko, AP., Aigaki, T., Tabata, T., Takeyama, KI., Kato, S.
    • Journal Title

      Proc Natl Acad Sci USA. 106

      Pages: 3818-3822

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] A Blood-Borne PDGF/VEGF-like Ligand Initiates Wound-Induced Epidermal Cell Migration in Drosophila Larvae2009

    • Author(s)
      Wu, Y., Brock, A.R., Wang, Y., Fujitani, K., Ueda, R., Galko, M.J.
    • Journal Title

      Curr. Biol. 19

      Pages: 1-5

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Transposition of the vertebrate To12 transposable element in Drosophila melanogaster2008

    • Author(s)
      Urasaki A, Mito T, Noji S, Ueda R, Kawakami K
    • Journal Title

      Gene 425(1-2)

      Pages: 64-68

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Identification of the Drosophila core 1β1, 3-galactosyltransferase gene that synthesizes T antigen in the embryonic central nervous system and hemocytes.2008

    • Author(s)
      Yoshida, H., Fuwa, T., Arima, M., Hamamoto, H., Sasaki, N., Ichimiya, T., Osawa, K-I., Ueda, R., Nishihara, S.
    • Journal Title

      Glycobiology 18(12)

      Pages: 1094-1104

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Natural variation of ebony gene controlling thoracic pigmentation in Drosophila melanogaster.2007

    • Author(s)
      Takahashi, A., Takahashi, K., Ueda, R., Takano-Shimizu, T.
    • Journal Title

      Genetics 177(2)

      Pages: 1233-1237

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] ATF-2 regulates fat metabolism in Drosophila.2007

    • Author(s)
      Okamura, T., Shimizu, H., Nagao, T., Ueda, R., Ishii, S.
    • Journal Title

      Mol Biol Cell 18(4)

      Pages: 1519-1529

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] A female-biased expressed elongase involved in long-chain hydrocarbon biosynthesis and courtship behavior in Drosophila melanogaster.2007

    • Author(s)
      Chertemps, T., Duportets, L., Labeur, C., Ueda, R., Takahashi, K., Saigo, K., Wicker-Thomas, C.
    • Journal Title

      Proc Natl Acad Sci USA 104(11)

      Pages: 4273-4278

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] ATF-2 regulates fat metabolism in Drosophila2007

    • Author(s)
      Okamura, T, Shimizu, H, Nagao, T, Ueda R, and Ishii, S.
    • Journal Title

      Mol Biol Cell 18(4)

      Pages: 1519-1529

    • Peer Reviewed
    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Light Activates Output from Evening Neurons and Inhibits Output from Morning Neurons in the Drosophila Circadian Clock.2007

    • Author(s)
      Picot, M., Cusumano, P., Klarsfeld, A., Ueda, R., Rouyer, F.
    • Journal Title

      PLoS Biol. 5(11)

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Drosophila immunity: a large-scale in vivo RNAi screen identifies five serine proteases required for Toll activation.2006

    • Author(s)
      Kambris, Z., Brun, S., Jang, IH., Nam, HJ., Romeo, Y., Takahashi, K., Lee, WJ., Ueda, R., Lemaitre, B.
    • Journal Title

      Curr Biol. 16

      Pages: 808-813

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] IKKεRegulates F Actin Assembly and Interacts with Drosophila IAP1 in Cellular Morphogenesis2006

    • Author(s)
      Oshima, K., Takeda, M., Kuranaga, E., Ueda, R., Aigaki, T., Miura, M., Hayashi, S.
    • Journal Title

      Current Biology 16

      Pages: 1531-1537

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Essential role of the apoptotic cell engulfment genes draper and ced-6 in programmed axon pruning during Drosophila metamorphosis.2006

    • Author(s)
      Awasaki, T., Tatsumi, R., Takahashi, K., Arai, K., Nakanishi, Y., Ueda, R., Ito, K.
    • Journal Title

      Neuron 49

      Pages: 855-67

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] IKK epsilon regulates F actin assembly and interacts with Drosophila IAP1 in cellular morphogenesis.2006

    • Author(s)
      Oshima K, Takeda M, Kuranaga E, Ueda R, Aigaki T, Miura M, Hayashi S
    • Journal Title

      Curr Biol 16

      Pages: 1531-1537

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Differential microarray analysis of Drosophila mushroom body transcripts using chemical ablation.2006

    • Author(s)
      Kobayashi M, Michaut L, Ino A, Honjo K, Nakajima T, Maruyama Y, Mochizuki H, Ando M, Ghangrekar I, Takahashi K, Saigo, K., Ueda, R., Gehring, W.J., Furukubo-Tokunaga, K.
    • Journal Title

      Proc Natl Acad Sci USA 103(39)

      Pages: 14417-22

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Control of axonal sprouting and dendrite branching by the Nrg-Ank complex at the neuron-glia interface2006

    • Author(s)
      Yamamoto, M., Ueda, R., Takahashi, K., Saigo, K., Uemura, T.
    • Journal Title

      Curr Bio 16(16)

      Pages: 1678-83

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Wing-to-leg homeosis by Spineless causes an apoptosis regulated by Fish-lips, a novel Leucine-Rich Repeats transmembrane protein.2005

    • Author(s)
      Adachi-Yamada, T., Harumoto, T., Sakurai, K., Ueda, R., Saigo, K., 0'Connor, M.B., Nakato, H.
    • Journal Title

      Mol. Cell. Biol. 25

      Pages: 3140-3150

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] G-protein gamma subunit 1 is required for sugar reception in Drosophila2005

    • Author(s)
      Ishimoto, H., Takahashi, K., Ueda, R., Tanimura, T.
    • Journal Title

      The EMBO J. 24

      Pages: 3259-3265

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] The transmembrane protein, Tincar, is involved in the development of the compound eye in Drosophila melanogaster.2005

    • Author(s)
      Hirota, Y., Sawamoto, K., Takahashi, K., Ueda, R., Okano, H.
    • Journal Title

      Dev. Genes Evol. 215

      Pages: 90-96

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] G-protein gamma subunit 1 is required for sugar reception in Drosophila.2005

    • Author(s)
      Ishimoto, H., Takahashi, K., Ueda, R., Tanimura, T.
    • Journal Title

      The EMBO J. 24

      Pages: 3259-3265

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] The transmembrane protein, Tincar, is involved in the development of the compound eye in Drosophila melanogaster.2005

    • Author(s)
      Hirota, Y., Sawamoto, K., Takahashi, K., Ueda, R., Okano, H.
    • Journal Title

      Dev. Genes Evol. 215

      Pages: 90-96

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Inhibitor of apoptosis 2 and TAK1-binding protein are components of the Drosophila Imd pathway.2005

    • Author(s)
      Kleino, A., Valanne, S., Ulvila, J., Kallio, J., Myllymaki, H., Enwald, H., Stoven, S., Poidevin, M., Ueda, R., Hultmark, D., Lemaitre, B., Ramet, M.
    • Journal Title

      The EMBO J. 24

      Pages: 3423-3434

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Inhibitor of apoptosis 2 and TAK1-binding protein are components of the Drosophila Imd pathway2005

    • Author(s)
      Kleino, A., Valanne, S., Ulvila, J., Kallio, J., Myllymaki, H., Enwald, H., Stoven, S., Poidevin, M., Ueda, R., Hultmark, D., Lemaitre, B., Ramet, M.
    • Journal Title

      The EMBO J. 25

      Pages: 3423-3434

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] Wing-to-leg homeosis by Spineless causes an apoptosis regulated by Fish-lips, a novel Leucine-Rich Repeats transmembrane protein.2005

    • Author(s)
      Adachi-Yamada, T., Harumoto, T., Sakurai, K., Ueda, R., Saigo, K., O'Connor, M.B., Nakato, H.
    • Journal Title

      Mol. Cell. Biol. 25

      Pages: 3140-3150

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Guidelines for the selection of highly effective siRNA sequences for mammalian and chick RNA interference.2004

    • Author(s)
      Ui-Tei, K., Naito, Y., Takahashi, F., Haraguchi, T., Ohki-Hamazaki, H., Juni, A., Ueda, R., Saigo, K.
    • Journal Title

      Nucleic Acids Res. 32

      Pages: 936-948

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] RNA interference induced by transient or stable expression of hairpin structures of double stranded RNA in Drosophila and mammalian cells.2004

    • Author(s)
      Ui-Tei, K., Ueda, R., Zenno, S., Takahashi, F., Doi, N., Naito, Y., Yamamoto, M., Hashimoto, N., Takahashi, K., Hamada, T., Tokunaga, T., Saigo, K.
    • Journal Title

      Molekulyarnaya biologiya 38

      Pages: 228-238

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] The twisted-abdomen phenotype of Drosophila POMT1 and POMT2 mutants coincides with their heterophilic protein O-mannosyltransferase activity.2004

    • Author(s)
      Ichimiya, T., Manya, H., Ohmae, Y, Yoshida, H., Takahashi, K., Ueda, R., Endo, T., Nishihara, S.
    • Journal Title

      J. Cell Biol. 166

      Pages: 42638-42647

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] Drosophila glucosylceramide synthase : a negative regulator of cell death mediated by proapoptotic factors.2004

    • Author(s)
      Koganeya, A.K., Sasamura, T., Oshima, E., Suzuki, E., Nishihara, S., Ueda, R., Hirabayashi, Y
    • Journal Title

      J. Cell Biol. 166

      Pages: 35995-36002

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] Regulation of Notch signaling by Drosophila heparan sulfate 3-O sulfotransferase.2004

    • Author(s)
      Kamimura, K., Rhodes, J.M., Ueda, R., McNeely, M., Shukla, D., Kimata, K., Spear, P.G., Shworak, N.W., Nakato, H.
    • Journal Title

      J. Cell Biol. 166

      Pages: 1069-1079

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] A Drosophila salivary gland mucin is also expressed in immune tissues : evidence for a function in coagulation and the entrapment of bacteria.2004

    • Author(s)
      Korayem, A.M., Fabbri, M., Takahashi, K., Scherfer, C., Lindgren, M., Schmidt, O., Ueda, R., Dushay, M.S., Theopold, U.
    • Journal Title

      Insect Biochem Mol Biol. 34

      Pages: 1297-1304

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] In vivo RNA interference analysis reveals an unexpected role for GNBP1 in the defence against Gram-positive bacterial infection in Drosophila adults.2004

    • Author(s)
      Pili-Floury, S., Leulier, F., Takahashi, K., Saigo, K., Samain, E., Ueda, R., Lemaitre, B.
    • Journal Title

      J. Cell Biol. 166

      Pages: 12848-12853

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] PVR plays a critical role via JNK activation in thorax closure during Drosophila metamorphosis.2003

    • Author(s)
      Ishimaru, S., Ueda, R., Hinohara, Y, Ohtani, M., Hanafusa, H.
    • Journal Title

      The EMBO J. 23

      Pages: 3984-3994

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] Molecular cloning and identification of 3'-phosphoadenosine 5'-phosphosulfate transporter.2003

    • Author(s)
      Kamiyama, S., Suda, T., Ueda, R., Suzuki, M., Okubo, R., Kikuchi, N., Chiba, Y, Goto, S., Toyoda, T., Saigo, K., Watanabe, M., Narimatsu, H., Jigami, Y, Nishihara, S.
    • Journal Title

      J. Biol. Chem. 278

      Pages: 25958-25963

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] Proteoglycan UDP-galactose : beta-xylose beta1,4galactosyltransferase I is essential for viability in Drosophila melanogaster.2003

    • Author(s)
      Takemae, H., Ueda, R., Ohkubo, R., Nakato, H., Izumi, S., Saigo, K., Nishihara, S.
    • Journal Title

      J. Biol. Chem. 278

      Pages: 15571-15578

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] GETDB, a database compiling expression patterns and molecular locations of a collection of Ga14 enhancer traps.2002

    • Author(s)
      Hayashi, S., Ito, K., Sado, Y., Taniguchi, M., Akimoto, A., Takeuchi, H., Aigaki, T., Matsuzaki, F., Nakagoshi, H., Tanimura, T, Ueda, R., Uemura, T., Yoshihara, M., Goto, S.
    • Journal Title

      Genesis 34

      Pages: 58-61

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] Requirement of Dicer and eIF2C translation initiation factors for short-interfering-RNA-mediated gene silencing in mammalian cells.2002

    • Author(s)
      Doi, N., Zenno, S., Ueda, R., Ohki-Hamazaki, H., Ui-Tei, K., Saigo, K.
    • Journal Title

      Curr. Biol. 13

      Pages: 41-46

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] Requirements of high levels of Hedgehog signaling activity for medial-region cell fate determination in Drosophila leg : identification of pxb, a putative Hedgehog signaling attenuator gene repressed along the anterior-posterior compartment boundary.2002

    • Author(s)
      Inaki, M., Kojima, T., Ueda, R., Saigo, K.
    • Journal Title

      Mech. Develop. 116

      Pages: 3-18

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] Inducible expression of double strand RNA reveals a role of dFADD in the regulation of antibacterial response in Drosophila.2002

    • Author(s)
      Leulier, F., Vidal, S.S., Saigo, K., Ueda, R., Lemaitre, B.
    • Journal Title

      Curr. Biol. 12

      Pages: 996-1000

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • [Journal Article] A functional genomics strategy reveals clockwork orange as a transcriptional regulator in the Drosophila circadian clock

    • Author(s)
      Akira Matsumoto*, Maki Ukai-Tadenuma, Rikuhiro G. Yamada, Jerry Houl, Kenichiro D. Uno, Takeya Kasukawa, Brigitte Dauwalder, Taichi Q. Itoh, Kuniaki Takahashi, Ryu Ueda, Paul E. Hardin, Teiichi Tanimura, Hiroki R.
    • Journal Title

      Genes and Development 21(13)

      Pages: 1687-1700

    • Data Source
      KAKENHI-PROJECT-17017032
  • [Journal Article] Systematic In Vivo RNAi Analysis of Putative Components of the Drosophila Cell Death Machinery

    • Author(s)
      Leulier, F., Ribeiro, S P., Palmer, E., Tenev, T., Takahashi, K., Robertson, D., Zachariou, A., Pichaud, F., Ueda, R., Meier, P.
    • Journal Title

      Cell Death and Differentiation (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Data Source
      KAKENHI-PROJECT-15011253
  • 1.  SAIGO Kaoru (50136454)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 9 results
  • 2.  AIGAKI Toshiro (80150879)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 3 results
  • 3.  HAYASHI Shigeo (60183092)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 2 results
  • 4.  高橋 邦明 (80370112)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results

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