Yamashita Yui 山下由衣

Researcher Number	40803383
Other IDs
Affiliation (based on the past Project Information) *help	2017 – 2022: 北海道大学, 農学研究院, 助教
Review Section/Research Field	Principal Investigator Basic Section 44030:Plant molecular biology and physiology-related / Plant molecular biology/Plant physiology
Keywords	Principal Investigator uORF / ショ糖 / 代謝制御 / 翻訳制御 / 転写後遺伝子発現制御 / 翻訳停滞 / 翻訳 / 転写因子 / リボソーム / ショ糖応答 / C/N比 / 上流ORF

複数の上流ORFが奏でる臨機応変なショ糖感知機構の解明Principal Investigator
- Principal Investigator
  
  山下由衣
- Project Period (FY)
  2021 – 2022
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 44030:Plant molecular biology and physiology-related
- Research Institution
  Hokkaido University
Sucrose-sensing and its contribution to carbon/nitrogen metabolic regulation in plantsPrincipal Investigator
- Principal Investigator
  
  Yamashita Yui
- Project Period (FY)
  2019 – 2020
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 44030:Plant molecular biology and physiology-related
- Research Institution
  Hokkaido University
Sucrose-sensing through translation regulation of a transcription factorPrincipal Investigator
- Principal Investigator
  
  Yamashita Yui
- Project Period (FY)
  2017 – 2018
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Research Field
  
  Plant molecular biology/Plant physiology
- Research Institution
  Hokkaido University

All 2022 2021 2020 2019 2018 2017

All Journal Article Presentation

[Journal Article] Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels2022
- Author(s)
  Hiragori Yuta、Takahashi Hiro、Karino Taihei、Kaido Atsushi、Hayashi Noriya、Sasaki Shun、Nakao Kodai、Motomura Taichiro、Yamashita Yui、Naito Satoshi、Onouchi Hitoshi
- Journal Title
  
  Plant Molecular Biology
  
  Volume: 111 Issue: 1-2 Pages: 37-55
- DOI
  10.1007/s11103-022-01309-1
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-20H05926, KAKENHI-PROJECT-19H02917, KAKENHI-PROJECT-22KJ0031, KAKENHI-PROJECT-19K22299, KAKENHI-PROJECT-21K15114
[Journal Article] Translational Landscape of a C4 Plant, <i>Sorghum bicolor</i>, Under Normal and Sulfur-Deficient Conditions2022
- Author(s)
  Sotta Naoyuki、Chiba Yukako、Aoyama Haruka、Takamatsu Seidai、Suzuki Takamasa、Miwa Kyoko、Yamashita Yui、Naito Satoshi、Fujiwara Toru
- Journal Title
  
  Plant and Cell Physiology
  
  Volume: － Issue: 5 Pages: 592-604
- DOI
  10.1093/pcp/pcac023
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21K15114, KAKENHI-PLANNED-20H05926
[Journal Article] Reverse genetics-based biochemical studies of the ribosomal exit tunnel constriction region in eukaryotic ribosome stalling: spatial allocation of the regulatory nascent peptide at the constriction.2020
- Author(s)
  Seidai Takamatsu, Yubun Ohashi, Noriyuki Onoue, Yoko Tajima, Tomoya Imamichi, Shinya Yonezawa, Kyoko Morimoto, Hitoshi Onouchi, Yui Yamashita, Satoshi Naito
- Journal Title
  
  Nucleic Acids Res.
  
  Volume: 48 Issue: 4 Pages: 1985-1999
- DOI
  10.1093/nar/gkz1190
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K16159, KAKENHI-PROJECT-19H02917, KAKENHI-PROJECT-17J00982, KAKENHI-PROJECT-18H03330
[Presentation] Mechanistic specificity of ribosome stalling involved in ER-stress response in plants2022
- Author(s)
  Tomoya Imamichi, Nao Kusumoto, Seidai Takamatsu, Yugo Honda, Shiori Muraoka, Hitoshi Onouchi, Satoshi Naito, Yui Yamashita
- Organizer
  第63回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-21K15114
[Presentation] Sucrose-induced post-transcriptional control of S1 bZIP family genes in Arabidopsis thaliana2022
- Author(s)
  Yugo Honda, Shugo Sugawara, Hitoshi Onouchi, Satoshi Naito, Yui Yamashita
- Organizer
  第63回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-21K15114
[Presentation] シロイヌナズナにおけるショ糖濃度に応答した翻訳停滞とmRNA分解2021
- Author(s)
  Shugo Sugawara, Tomoya Imamichi, Yugo Honda, Hitoshi Onouchi, Satoshi Naito and Yui Yamashita
- Organizer
  第62回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-19K16159
[Presentation] シロイヌナズナにおけるショ糖濃度に応答した翻訳停滞とmRNA分解の解析2020
- Author(s)
  Shugo Sugawara, Tomoya Imamichi, Yugo Honda, Hitoshi Onouchi, Satoshi Naito and Yui Yamashita
- Organizer
  第43回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-19K16159
[Presentation] シロイヌナズナS1グループbZIP遺伝子のショ糖に応答した転写後発現制御2020
- Author(s)
  菅原収吾，尾之内均，内藤哲，山下由衣
- Organizer
  第61回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-19K16159
[Presentation] Nascent peptide-mediated ribosome stalling in eukaryotes: What we see from pulse-chase experiments2020
- Author(s)
  Tomoya Imamichi, Shugo Sugawara, Seidai Takamatsu, Hitoshi Onouchi, Yui, Yamashita and Satoshi Naito
- Organizer
  第61回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-19K16159
[Presentation] In vivo status of S-adenosyl-L-methionine-induced translation arrest on Arabidopsis CGS1 mRNA2019
- Author(s)
  Miku Fujita, Seidai Takamatsu, Tomoya Imamichi, Yukako Chiba, Satoshi Naito and Yui Yamashita
- Organizer
  EMBO Conference: Protein Synthesis and Translational Control
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K16159
[Presentation] Reverse genetics-based biochemical strudies of the ribosomal exit tunnel constriction region on eukaryotic programed ribosome stalling systems2019
- Author(s)
  Seidai Takamatsu, Yubun Ohashi, Noriyuki Onoue, Yoko Tajima, Tomoya Imamichi, Kyoko Morimoto, Shinya Yonezawa, Hitoshi Onouchi, Yui Yamashita, and Satoshi Naito
- Organizer
  EMBO Conference: Protein Synthesis and Translational Control
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-19K16159
[Presentation] Conserved sucrose sensing through nascent peptide-meditated ribosome stalling in Arabidopsis S1 bZIP family uORFs2018
- Author(s)
  Yui Yamashita, Seidai Takamatsu, Shugo Sugawara, Michael Glasbrenner, Thomas Becker, Satoshi Naito and Roland Beckmann
- Organizer
  Proteins: From the Cradle to the Grave
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17H06485
[Presentation] Sucrose-induced ribosome stalling of Arabidopsis bZIP11 uORF2017
- Author(s)
  Yui Yamashita, Seidai Takamatsu, Michael Glasbrenner, Thomas Becker, Satoshi Naito and Roland Beckmann
- Organizer
  EMBO Conference on Protein Synthesis and Translational Control
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-17H06485
[Presentation] Sucrose sensing through nascent peptide-meditated ribosome stalling in Arabidopsis bZIP11 uORF22017
- Author(s)
  Yui Yamashita, Seidai Takamatsu, Michael Glasbrenner, Thomas Becker, Satoshi Naito and Roland Beckmann
- Organizer
  第59回日本植物生理学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-17H06485

1. Hirai Masami Y.

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
2. 内藤哲

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Yamashita Yui 山下 由衣

Research Projects

Research Products

Co-Researchers

複数の上流ORFが奏でる臨機応変なショ糖感知機構の解明Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Sucrose-sensing and its contribution to carbon/nitrogen metabolic regulation in plantsPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Sucrose-sensing through translation regulation of a transcription factorPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Journal Article] Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Translational Landscape of a C4 Plant, <i>Sorghum bicolor</i>, Under Normal and Sulfur-Deficient Conditions2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Reverse genetics-based biochemical studies of the ribosomal exit tunnel constriction region in eukaryotic ribosome stalling: spatial allocation of the regulatory nascent peptide at the constriction.2020

Author(s)

Journal Title

DOI

Data Source

[Presentation] Mechanistic specificity of ribosome stalling involved in ER-stress response in plants2022

Author(s)

Organizer

Data Source

[Presentation] Sucrose-induced post-transcriptional control of S1 bZIP family genes in Arabidopsis thaliana2022

Author(s)

Organizer

Data Source

[Presentation] シロイヌナズナにおけるショ糖濃度に応答した翻訳停滞とmRNA分解2021

Author(s)

Organizer

Data Source

[Presentation] シロイヌナズナにおけるショ糖濃度に応答した翻訳停滞とmRNA分解の解析2020

Author(s)

Organizer

Data Source

[Presentation] シロイヌナズナS1グループbZIP遺伝子のショ糖に応答した転写後発現制御2020

Author(s)

Organizer

Data Source

[Presentation] Nascent peptide-mediated ribosome stalling in eukaryotes: What we see from pulse-chase experiments2020

Author(s)

Organizer

Data Source

[Presentation] In vivo status of S-adenosyl-L-methionine-induced translation arrest on Arabidopsis CGS1 mRNA2019

Author(s)

Organizer

Data Source

[Presentation] Reverse genetics-based biochemical strudies of the ribosomal exit tunnel constriction region on eukaryotic programed ribosome stalling systems2019

Author(s)

Organizer

Data Source

[Presentation] Conserved sucrose sensing through nascent peptide-meditated ribosome stalling in Arabidopsis S1 bZIP family uORFs2018

Author(s)

Organizer

Data Source

[Presentation] Sucrose-induced ribosome stalling of Arabidopsis bZIP11 uORF2017

Author(s)

Organizer

Data Source

[Presentation] Sucrose sensing through nascent peptide-meditated ribosome stalling in Arabidopsis bZIP11 uORF22017

Author(s)

Organizer

Yamashita Yui 山下由衣