Kawashima Shuichi 川島秀一

… Alternative Names

川島秀一カワシマシュウイチ

KAWASHIMA Shuichi 川島秀一

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Researcher Number	50314274
Other IDs
Affiliation (Current)	2025: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任准教授
Affiliation (based on the past Project Information) *help	2019 – 2023: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任准教授 2017 – 2018: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任助教 2016: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイエンス統合データベースセンター), データサイエンス共同利用基盤施設, 特任助教 2015: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイ, ライフサイエンス統合データベースセンター, 助教 2014: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイ, 大学共同利用機関等の部局等, 助教 … More 2011: 東京大学, 医科学研究所, 助教 2004: University of Tokyo, Institute of Medical Science, Instructor, 医科学研究所, 助手 2003: 京都大学, 化学研究所, 助手 Less
Review Section/Research Field	Except Principal Investigator Basic Section 62010:Life, health and medical informatics-related / Biological Sciences / Life / Health / Medical informatics / Applied genomics
Keywords	Except Principal Investigator システム生物 / 生命情報 / 疾患アトラクター / 深層学習 / 機械学習 / アルツハイマー病 / 遺伝子・環境相互作用 / 多因子疾患の発症機序 / 情報統合 / データベース … More / セマンティック・ウェブ / データ統合 / オントロジー / コホート / ゲノムグラフ / 日本人ゲノム / Pathway analysis / Comparative genome analysis / Microarray analysis / Systems biology / Bioinformatics / Genome database / 機能予測 / オーソログ解析 / マイクロアレイ / パスウェイ解析 / 比較ゲノム解析 / マイクロアレイ解析 / システム生物学 / バイオインフォマティクス / ゲノムデータベース / バクテリア / NER / ゲノム / 微生物 / 文献全文 / オープンアクセス / 論文全文 / マニュアルアノテーション / セマンティックウェブ / 微生物ゲノム / テキストマイニング / 完全長cDNA / ワクチン / ダニアレルギー Less

Systems pathology approach using deep learning to understand the effect of environmental exposure on the pathogenesis of common diseases
- Principal Investigator
  
  荻島創一
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  Tohoku University
Semantic integration of Japanese genome and health information
- Principal Investigator
  
  Katayama Toshiaki
- Project Period (FY)
  2018 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  大学共同利用機関法人情報・システム研究機構(機構本部施設等)
Extracting Biologically Interesting Metadata from Full-Text Papers
- Principal Investigator
  
  Yamamoto Yasunori
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  大学共同利用機関法人情報・システム研究機構(機構本部施設等)
Screening of house dust mite allergy vaccine candidates using full-length cDNA library.
- Principal Investigator
  
  NIHEI Akiko (SHIBUI akiko)
- Project Period (FY)
  2010 – 2011
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Applied genomics
- Research Institution
  The University of Tokyo
Integrated Database of Microbial Genomes and Cellular Functions
- Principal Investigator
  
  KANEHISA Minoru
- Project Period (FY)
  2003 – 2004
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Kyoto University

All 2023 2022 2021 2020 2019 2018

All Journal Article Presentation

[Journal Article] RDFization of Interview Forms for Effective Use of Pharmaceutical Documents2023
- Author(s)
  長尾知生子、鎌田真由美、中津井雅彦、深川明子、片山俊明、川島秀一、水口賢司、安倍理加
- Journal Title
  
  Japanese Journal of Drug Informatics
  
  Volume: 24 Issue: 4 Pages: 187-195
- DOI
  10.11256/jjdi.24.187
- ISSN
  1345-1464, 1883-423X
- Year and Date
  2023-02-28
- Language
  Japanese
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21H03537
[Journal Article] TogoID: an exploratory ID converter to bridge biological datasets2022
- Author(s)
  Ikeda Shuya、Ono Hiromasa、Ohta Tazro、Chiba Hirokazu、Naito Yuki、Moriya Yuki、Kawashima Shuichi、Yamamoto Yasunori、Okamoto Shinobu、Goto Susumu、Katayama Toshiaki
- Journal Title
  
  Bioinformatics
  
  Volume: 38 Issue: 17 Pages: 4194-4199
- DOI
  10.1093/bioinformatics/btac491
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21H03537
[Journal Article] TogoVar: A comprehensive Japanese genetic variation database2022
- Author(s)
  Mitsuhashi Nobutaka、Toyo-oka Licht、Katayama Toshiaki、Kawashima Minae、Kawashima Shuichi、Miyazaki Kazunori、Takagi Toshihisa
- Journal Title
  
  Human Genome Variation
  
  Volume: 9 Issue: 1 Pages: 44-44
- DOI
  10.1038/s41439-022-00222-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-21H03537
[Journal Article] The Lethal(2)-Essential-for-Life [L(2)EFL] Gene Family Modulates Dengue Virus Infection in Aedes aegypti2020
- Author(s)
  Runtuwene Lucky R., Kawashima Shuichi et al.
- Journal Title
  
  International Journal of Molecular Sciences
  
  Volume: 21 Issue: 20 Pages: 7520-7520
- DOI
  10.3390/ijms21207520
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545, KAKENHI-PROJECT-20K21298, KAKENHI-PROJECT-17H04649
[Journal Article] TogoGenome/TogoStanza: modularized Semantic Web genome database2019
- Author(s)
  Katayama Toshiaki、Kawashima Shuichi、Okamoto Shinobu、Moriya Yuki、Chiba Hirokazu、Naito Yuki、Fujisawa Takatomo、Mori Hiroshi、Takagi Toshihisa
- Journal Title
  
  Database
  
  Volume: 2019 Pages: 1-11
- DOI
  10.1093/database/bay132
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K11545
[Journal Article] BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services2019
- Author(s)
  Toshiaki, Katayama, et. al.
- Journal Title
  
  F1000Research
  
  Volume: 8 Pages: 1-25
- DOI
  10.12688/f1000research.18238.1
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11522, KAKENHI-PROJECT-18K11545
[Journal Article] NBDC RDF portal: a comprehensive repository for semantic data in life sciences2018
- Author(s)
  Kawashima Shuichi、Katayama Toshiaki、Hatanaka Hideki、Kushida Tatsuya、Takagi Toshihisa
- Journal Title
  
  Database
  
  Volume: 2018 Pages: 1-11
- DOI
  10.1093/database/bay123
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] セマンティックウェブ技術による医薬品関連情報の統合利用2021
- Author(s)
  川島秀一
- Organizer
  第18回 DIA 日本年会2021
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] TogoVar: providing integrated genomic information of Japanese population2021
- Author(s)
  L. Toyo-oka, N. Mitsuhashi, M. Kawashima, T. Katayama, S. Kawashima, T. Takagi
- Organizer
  Annual meeting of American Society of Human Genetics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] TogoID: データベース統合の基盤となるID変換サービス2021
- Author(s)
  池田秀也、千葉啓和、藤原豊史、原薗陛正、井手隆広、片山俊明、川島秀一、箕輪真理、三橋信孝、守屋勇樹、内藤雄樹、仲里猛留、信定知江、大田達郎、小野浩雅、申在紋、鈴木拓真、高月照江、建石由佳、豊岡理人、山本泰智、八塚茂
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] TogoVarによるバリアント頻度情報統合とNBDCヒトデータベースによるデータ共有推進2021
- Author(s)
  豊岡理人、三橋信孝、川嶋実苗、片山俊明、川島秀一、秦千比呂、福田亜沙美、児玉悠一、藤澤貴智、高木利久
- Organizer
  日本人類遺伝学会第66回大会・第28回日本遺伝子診療学会大会
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] NANDO and NanbyoData: a disease ontology for Japanese rare and intractable diseases (Nanbyo) and a portal website for providing centralized access to the latest and diverse knowledge of Nanbyo2021
- Author(s)
  Ninomiya K, Kikuchi A, Takatsuki T, Kushida T, Yamamoto Y, Katayama T, Kawashima S, Soichi O, Fujiwara T
- Organizer
  GA4GH 9th Plenary Meeting
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] Development of semantic APIs for biomedical databases standardized in Med2RDF2019
- Author(s)
  Katayama T, Kamada M, Kawashima S, Nakatsui M, Kojima R, Okuno Y
- Organizer
  The American Society of Human Genetics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] TogoVar: integrated database among Japanese genomic variation databases2019
- Author(s)
  Licht Toyo-oka, Nobutaka Mitsuhashi, Minae Kawashima, Toyofumi Fujiwara, Toshiaki Katayama, Shuichi Kawashima, Yuka Tateisi, and Toshihisa Takagi
- Organizer
  The American Society of Human Genetics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] データ共有を推進のためのNBDCヒトデータベースおよび日本人集団におけるアリル頻度情報統合データベース: TogoVar2019
- Author(s)
  豊岡理人、三橋信孝、川嶋実苗、建石由佳、藤原豊史、片山俊明、川島秀一、福田亜沙美、児玉悠一、高木利久
- Organizer
  日本人類遺伝学会
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] Integrated Growth Media Database by Standardizing Ingredient Information.2019
- Author(s)
  Shuichi Kawashima, Toshiaki Katayama, Yuki Moriya, Shinobu Okamoto, Yasunori Yamamoto and Susumu Goto
- Organizer
  12th International Semantic Web Applications and Tools for Health Care and Life Science Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] Med2RDF: Semantic Biomedical Knowledge-base and APIs for the Clinical Genome Medicine.2019
- Author(s)
  Mayumi Kamada, Toshiaki Katayama, Shuichi Kawashima, Ryosuke Kojima, Masahiko Nakatsui and Yasushi Okuno
- Organizer
  12th International Semantic Web Applications and Tools for Health Care and Life Science Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] Towards Making Knowledge in Literature LOD2018
- Author(s)
  Yasunori Yamamoto, Shinobu Okamoto, Shuichi Kawashima, Toshiaki Katayama
- Organizer
  Biocuration 2018
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26330343

1. KATAYAMA Toshiaki (60396869)

# of Collaborated Projects: 4 results

# of Collaborated Products: 14 results
2. 荻島創一 (40447496)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
3. NIHEI Akiko (50313846)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. SUGANO Sumio (60162848)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. NAKAE Susumu (60450409)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. NOGAMI Sadao (90172767)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. Yamamoto Yasunori (50470076)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
8. KANEHISA Minoru (70183275)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 岡本忍 (90623893)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
10. 藤原豊史 (80815176)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
11. 宮下哲典 (60323995)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 鎌田真由美 (70749077)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 小島諒介 (70807651)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. 水野聖士 (80646795)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

Kawashima Shuichi 川島 秀一

川島 秀一 カワシマ シュウイチ

KAWASHIMA Shuichi 川島 秀一

Research Projects

Research Products

Co-Researchers

Systems pathology approach using deep learning to understand the effect of environmental exposure on the pathogenesis of common diseases

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Semantic integration of Japanese genome and health information

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Extracting Biologically Interesting Metadata from Full-Text Papers

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Screening of house dust mite allergy vaccine candidates using full-length cDNA library.

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Integrated Database of Microbial Genomes and Cellular Functions

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] RDFization of Interview Forms for Effective Use of Pharmaceutical Documents2023

Author(s)

Journal Title

DOI

ISSN

Year and Date

Language

Data Source

[Journal Article] TogoID: an exploratory ID converter to bridge biological datasets2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] TogoVar: A comprehensive Japanese genetic variation database2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] The Lethal(2)-Essential-for-Life [L(2)EFL] Gene Family Modulates Dengue Virus Infection in Aedes aegypti2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] TogoGenome/TogoStanza: modularized Semantic Web genome database2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] NBDC RDF portal: a comprehensive repository for semantic data in life sciences2018

Author(s)

Journal Title

DOI

Data Source

[Presentation] セマンティックウェブ技術による医薬品関連情報の統合利用2021

Author(s)

Organizer

Data Source

[Presentation] TogoVar: providing integrated genomic information of Japanese population2021

Author(s)

Kawashima Shuichi 川島秀一

川島秀一カワシマシュウイチ

KAWASHIMA Shuichi 川島秀一