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Kawashima Shuichi  川島 秀一

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… Alternative Names

川島 秀一  カワシマ シュウイチ

KAWASHIMA Shuichi  川島 秀一

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Researcher Number 50314274
Other IDs
Affiliation (Current) 2022: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任准教授
Affiliation (based on the past Project Information) *help 2019 – 2022: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任准教授
2017 – 2018: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任助教
2016: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイエンス統合データベースセンター), データサイエンス共同利用基盤施設, 特任助教
2015: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイ, ライフサイエンス統合データベースセンター, 助教
2014: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイ, 大学共同利用機関等の部局等, 助教 … More
2011: 東京大学, 医科学研究所, 助教
2004: University of Tokyo, Institute of Medical Science, Instructor, 医科学研究所, 助手
2003: 京都大学, 化学研究所, 助手 Less
Review Section/Research Field
Except Principal Investigator
Basic Section 62010:Life, health and medical informatics-related / Applied genomics / Life / Health / Medical informatics / Biological Sciences
Keywords
Except Principal Investigator
ダニアレルギー / ワクチン / 完全長cDNA / テキストマイニング / 微生物ゲノム / セマンティックウェブ / マニュアルアノテーション / 論文全文 / オープンアクセス / 文献全文 … More / 微生物 / ゲノム / NER / バクテリア / ゲノムデータベース / バイオインフォマティクス / システム生物学 / マイクロアレイ解析 / 比較ゲノム解析 / パスウェイ解析 / マイクロアレイ / オーソログ解析 / 機能予測 / Genome database / Bioinformatics / Systems biology / Microarray analysis / Comparative genome analysis / Pathway analysis / 日本人ゲノム / ゲノムグラフ / セマンティック・ウェブ / データベース / 情報統合 / 多因子疾患の発症機序 / 遺伝子・環境相互作用 / アルツハイマー病 / 機械学習 / 深層学習 Less
  • Research Projects

    (5 results)
  • Research Products

    (10 results)
  • Co-Researchers

    (15 People)
  •  Systems pathology approach using deep learning to understand the effect of environmental exposure on the pathogenesis of common diseases

    • Principal Investigator
      荻島 創一
    • Project Period (FY)
      2021 – 2023
    • Research Category
      Grant-in-Aid for Scientific Research (B)
    • Review Section
      Basic Section 62010:Life, health and medical informatics-related
    • Research Institution
      Tohoku University
  •  日本人のゲノム・健康・診療情報と公共知識ベースのセマンティック統合システムの開発

    • Principal Investigator
      片山 俊明
    • Project Period (FY)
      2018 – 2021
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Review Section
      Basic Section 62010:Life, health and medical informatics-related
    • Research Institution
      大学共同利用機関法人情報・システム研究機構(機構本部施設等)
  •  Extracting Biologically Interesting Metadata from Full-Text Papers

    • Principal Investigator
      Yamamoto Yasunori
    • Project Period (FY)
      2014 – 2017
    • Research Category
      Grant-in-Aid for Scientific Research (C)
    • Research Field
      Life / Health / Medical informatics
    • Research Institution
      大学共同利用機関法人情報・システム研究機構(機構本部施設等)
  •  Screening of house dust mite allergy vaccine candidates using full-length cDNA library.

    • Principal Investigator
      NIHEI Akiko (SHIBUI akiko)
    • Project Period (FY)
      2010 – 2011
    • Research Category
      Grant-in-Aid for Young Scientists (B)
    • Research Field
      Applied genomics
    • Research Institution
      The University of Tokyo
  •  Integrated Database of Microbial Genomes and Cellular Functions

    • Principal Investigator
      KANEHISA Minoru
    • Project Period (FY)
      2003 – 2004
    • Research Category
      Grant-in-Aid for Scientific Research on Priority Areas
    • Review Section
      Biological Sciences
    • Research Institution
      Kyoto University

All 2020 2019 2018

All Journal Article Presentation

  • [Journal Article] The Lethal(2)-Essential-for-Life [L(2)EFL] Gene Family Modulates Dengue Virus Infection in Aedes aegypti.2020

    • Author(s)
      Runtuwene Lucky R., Kawashima Shuichi et al.
    • Journal Title

      Int J Mol Sci

      Volume: 21 Pages: 7520-7520

    • DOI

      10.3390/ijms21207520

    • Peer Reviewed / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K11545, KAKENHI-PROJECT-20K21298
  • [Journal Article] TogoGenome/TogoStanza: modularized Semantic Web genome database2019

    • Author(s)
      Katayama Toshiaki、Kawashima Shuichi、Okamoto Shinobu、Moriya Yuki、Chiba Hirokazu、Naito Yuki、Fujisawa Takatomo、Mori Hiroshi、Takagi Toshihisa
    • Journal Title

      Database

      Volume: 2019 Pages: 1-11

    • DOI

      10.1093/database/bay132

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K11545
  • [Journal Article] BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services2019

    • Author(s)
      Toshiaki, Katayama, et. al.
    • Journal Title

      F1000Research

      Volume: 8 Pages: 1677-1677

    • DOI

      10.12688/f1000research.18238.1

    • Peer Reviewed / Open Access / Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K11522, KAKENHI-PROJECT-18K11545
  • [Journal Article] NBDC RDF portal: a comprehensive repository for semantic data in life sciences2018

    • Author(s)
      Kawashima Shuichi、Katayama Toshiaki、Hatanaka Hideki、Kushida Tatsuya、Takagi Toshihisa
    • Journal Title

      Database

      Volume: 2018 Pages: 1-11

    • DOI

      10.1093/database/bay123

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-18K11545
  • [Presentation] Development of semantic APIs for biomedical databases standardized in Med2RDF2019

    • Author(s)
      Katayama T, Kamada M, Kawashima S, Nakatsui M, Kojima R, Okuno Y
    • Organizer
      The American Society of Human Genetics
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K11545
  • [Presentation] TogoVar: integrated database among Japanese genomic variation databases2019

    • Author(s)
      Licht Toyo-oka, Nobutaka Mitsuhashi, Minae Kawashima, Toyofumi Fujiwara, Toshiaki Katayama, Shuichi Kawashima, Yuka Tateisi, and Toshihisa Takagi
    • Organizer
      The American Society of Human Genetics
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K11545
  • [Presentation] データ共有を推進のためのNBDCヒトデータベースおよび日本人集団におけるアリル頻度情報統合データベース: TogoVar2019

    • Author(s)
      豊岡理人、三橋信孝、川嶋実苗、建石由佳、藤原豊史、片山俊明、川島秀一、福田亜沙美、児玉悠一、高木利久
    • Organizer
      日本人類遺伝学会
    • Data Source
      KAKENHI-PROJECT-18K11545
  • [Presentation] Integrated Growth Media Database by Standardizing Ingredient Information.2019

    • Author(s)
      Shuichi Kawashima, Toshiaki Katayama, Yuki Moriya, Shinobu Okamoto, Yasunori Yamamoto and Susumu Goto
    • Organizer
      12th International Semantic Web Applications and Tools for Health Care and Life Science Conference
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K11545
  • [Presentation] Med2RDF: Semantic Biomedical Knowledge-base and APIs for the Clinical Genome Medicine.2019

    • Author(s)
      Mayumi Kamada, Toshiaki Katayama, Shuichi Kawashima, Ryosuke Kojima, Masahiko Nakatsui and Yasushi Okuno
    • Organizer
      12th International Semantic Web Applications and Tools for Health Care and Life Science Conference
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-18K11545
  • [Presentation] Towards Making Knowledge in Literature LOD2018

    • Author(s)
      Yasunori Yamamoto, Shinobu Okamoto, Shuichi Kawashima, Toshiaki Katayama
    • Organizer
      Biocuration 2018
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-26330343
  • 1.  KATAYAMA Toshiaki (60396869)
    # of Collaborated Projects: 4 results
    # of Collaborated Products: 9 results
  • 2.  荻島 創一 (40447496)
    # of Collaborated Projects: 2 results
    # of Collaborated Products: 0 results
  • 3.  NIHEI Akiko (50313846)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 4.  SUGANO Sumio (60162848)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 5.  NAKAE Susumu (60450409)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 6.  NOGAMI Sadao (90172767)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 7.  Yamamoto Yasunori (50470076)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 1 results
  • 8.  KANEHISA Minoru (70183275)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 9.  岡本 忍 (90623893)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 10.  藤原 豊史 (80815176)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 1 results
  • 11.  宮下 哲典 (60323995)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 12.  鎌田 真由美 (70749077)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 13.  小島 諒介 (70807651)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 14.  水野 聖士 (80646795)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 15.  ORBA Yasuko
    # of Collaborated Projects: 0 results
    # of Collaborated Products: 1 results

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