Kawashima Shuichi 川島秀一

… Alternative Names

川島秀一カワシマシュウイチ

KAWASHIMA Shuichi 川島秀一

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Researcher Number	50314274
Other IDs
Affiliation (Current)	2022: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任准教授
Affiliation (based on the past Project Information) *help	2019 – 2022: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任准教授 2017 – 2018: 大学共同利用機関法人情報・システム研究機構(機構本部施設等), データサイエンス共同利用基盤施設, 特任助教 2016: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイエンス統合データベースセンター), データサイエンス共同利用基盤施設, 特任助教 2015: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイ, ライフサイエンス統合データベースセンター, 助教 2014: 大学共同利用機関法人情報・システム研究機構(新領域融合研究センター及びライフサイ, 大学共同利用機関等の部局等, 助教 … More 2011: 東京大学, 医科学研究所, 助教 2004: University of Tokyo, Institute of Medical Science, Instructor, 医科学研究所, 助手 2003: 京都大学, 化学研究所, 助手 Less
Review Section/Research Field	Except Principal Investigator Basic Section 62010:Life, health and medical informatics-related / Applied genomics / Life / Health / Medical informatics / Biological Sciences
Keywords	Except Principal Investigator ダニアレルギー / ワクチン / 完全長cDNA / テキストマイニング / 微生物ゲノム / セマンティックウェブ / マニュアルアノテーション / 論文全文 / オープンアクセス / 文献全文 … More / 微生物 / ゲノム / NER / バクテリア / ゲノムデータベース / バイオインフォマティクス / システム生物学 / マイクロアレイ解析 / 比較ゲノム解析 / パスウェイ解析 / マイクロアレイ / オーソログ解析 / 機能予測 / Genome database / Bioinformatics / Systems biology / Microarray analysis / Comparative genome analysis / Pathway analysis / 日本人ゲノム / ゲノムグラフ / セマンティック・ウェブ / データベース / 情報統合 / 多因子疾患の発症機序 / 遺伝子・環境相互作用 / アルツハイマー病 / 機械学習 / 深層学習 Less

Systems pathology approach using deep learning to understand the effect of environmental exposure on the pathogenesis of common diseases
- Principal Investigator
  
  荻島創一
- Project Period (FY)
  2021 – 2023
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  Tohoku University
日本人のゲノム・健康・診療情報と公共知識ベースのセマンティック統合システムの開発
- Principal Investigator
  
  片山俊明
- Project Period (FY)
  2018 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 62010:Life, health and medical informatics-related
- Research Institution
  大学共同利用機関法人情報・システム研究機構(機構本部施設等)
Extracting Biologically Interesting Metadata from Full-Text Papers
- Principal Investigator
  
  Yamamoto Yasunori
- Project Period (FY)
  2014 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Life / Health / Medical informatics
- Research Institution
  大学共同利用機関法人情報・システム研究機構(機構本部施設等)
Screening of house dust mite allergy vaccine candidates using full-length cDNA library.
- Principal Investigator
  
  NIHEI Akiko (SHIBUI akiko)
- Project Period (FY)
  2010 – 2011
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Applied genomics
- Research Institution
  The University of Tokyo
Integrated Database of Microbial Genomes and Cellular Functions
- Principal Investigator
  
  KANEHISA Minoru
- Project Period (FY)
  2003 – 2004
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Kyoto University

All 2020 2019 2018

All Journal Article Presentation

[Journal Article] The Lethal(2)-Essential-for-Life [L(2)EFL] Gene Family Modulates Dengue Virus Infection in Aedes aegypti.2020
- Author(s)
  Runtuwene Lucky R., Kawashima Shuichi et al.
- Journal Title
  
  Int J Mol Sci
  
  Volume: 21 Pages: 7520-7520
- DOI
  10.3390/ijms21207520
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545, KAKENHI-PROJECT-20K21298
[Journal Article] TogoGenome/TogoStanza: modularized Semantic Web genome database2019
- Author(s)
  Katayama Toshiaki、Kawashima Shuichi、Okamoto Shinobu、Moriya Yuki、Chiba Hirokazu、Naito Yuki、Fujisawa Takatomo、Mori Hiroshi、Takagi Toshihisa
- Journal Title
  
  Database
  
  Volume: 2019 Pages: 1-11
- DOI
  10.1093/database/bay132
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K11545
[Journal Article] BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services2019
- Author(s)
  Toshiaki, Katayama, et. al.
- Journal Title
  
  F1000Research
  
  Volume: 8 Pages: 1677-1677
- DOI
  10.12688/f1000research.18238.1
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11522, KAKENHI-PROJECT-18K11545
[Journal Article] NBDC RDF portal: a comprehensive repository for semantic data in life sciences2018
- Author(s)
  Kawashima Shuichi、Katayama Toshiaki、Hatanaka Hideki、Kushida Tatsuya、Takagi Toshihisa
- Journal Title
  
  Database
  
  Volume: 2018 Pages: 1-11
- DOI
  10.1093/database/bay123
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] Development of semantic APIs for biomedical databases standardized in Med2RDF2019
- Author(s)
  Katayama T, Kamada M, Kawashima S, Nakatsui M, Kojima R, Okuno Y
- Organizer
  The American Society of Human Genetics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] TogoVar: integrated database among Japanese genomic variation databases2019
- Author(s)
  Licht Toyo-oka, Nobutaka Mitsuhashi, Minae Kawashima, Toyofumi Fujiwara, Toshiaki Katayama, Shuichi Kawashima, Yuka Tateisi, and Toshihisa Takagi
- Organizer
  The American Society of Human Genetics
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] データ共有を推進のためのNBDCヒトデータベースおよび日本人集団におけるアリル頻度情報統合データベース: TogoVar2019
- Author(s)
  豊岡理人、三橋信孝、川嶋実苗、建石由佳、藤原豊史、片山俊明、川島秀一、福田亜沙美、児玉悠一、高木利久
- Organizer
  日本人類遺伝学会
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] Integrated Growth Media Database by Standardizing Ingredient Information.2019
- Author(s)
  Shuichi Kawashima, Toshiaki Katayama, Yuki Moriya, Shinobu Okamoto, Yasunori Yamamoto and Susumu Goto
- Organizer
  12th International Semantic Web Applications and Tools for Health Care and Life Science Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] Med2RDF: Semantic Biomedical Knowledge-base and APIs for the Clinical Genome Medicine.2019
- Author(s)
  Mayumi Kamada, Toshiaki Katayama, Shuichi Kawashima, Ryosuke Kojima, Masahiko Nakatsui and Yasushi Okuno
- Organizer
  12th International Semantic Web Applications and Tools for Health Care and Life Science Conference
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-18K11545
[Presentation] Towards Making Knowledge in Literature LOD2018
- Author(s)
  Yasunori Yamamoto, Shinobu Okamoto, Shuichi Kawashima, Toshiaki Katayama
- Organizer
  Biocuration 2018
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26330343

1. KATAYAMA Toshiaki (60396869)

# of Collaborated Projects: 4 results

# of Collaborated Products: 9 results
2. 荻島創一 (40447496)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
3. NIHEI Akiko (50313846)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
4. SUGANO Sumio (60162848)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. NAKAE Susumu (60450409)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. NOGAMI Sadao (90172767)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. Yamamoto Yasunori (50470076)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
8. KANEHISA Minoru (70183275)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. 岡本忍 (90623893)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
10. 藤原豊史 (80815176)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
11. 宮下哲典 (60323995)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
12. 鎌田真由美 (70749077)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
13. 小島諒介 (70807651)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
14. 水野聖士 (80646795)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
15. ORBA Yasuko

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Kawashima Shuichi 川島 秀一

川島 秀一 カワシマ シュウイチ

KAWASHIMA Shuichi 川島 秀一

Research Projects

Research Products

Co-Researchers

Systems pathology approach using deep learning to understand the effect of environmental exposure on the pathogenesis of common diseases

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

日本人のゲノム・健康・診療情報と公共知識ベースのセマンティック統合システムの開発

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Extracting Biologically Interesting Metadata from Full-Text Papers

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Screening of house dust mite allergy vaccine candidates using full-length cDNA library.

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Integrated Database of Microbial Genomes and Cellular Functions

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] The Lethal(2)-Essential-for-Life [L(2)EFL] Gene Family Modulates Dengue Virus Infection in Aedes aegypti.2020

Author(s)

Journal Title

DOI

Data Source

[Journal Article] TogoGenome/TogoStanza: modularized Semantic Web genome database2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] NBDC RDF portal: a comprehensive repository for semantic data in life sciences2018

Author(s)

Journal Title

DOI

Data Source

[Presentation] Development of semantic APIs for biomedical databases standardized in Med2RDF2019

Author(s)

Organizer

Data Source

[Presentation] TogoVar: integrated database among Japanese genomic variation databases2019

Author(s)

Organizer

Data Source

[Presentation] データ共有を推進のためのNBDCヒトデータベースおよび日本人集団におけるアリル頻度情報統合データベース: TogoVar2019

Author(s)

Organizer

Data Source

[Presentation] Integrated Growth Media Database by Standardizing Ingredient Information.2019

Author(s)

Organizer

Data Source

[Presentation] Med2RDF: Semantic Biomedical Knowledge-base and APIs for the Clinical Genome Medicine.2019

Author(s)

Organizer

Data Source

[Presentation] Towards Making Knowledge in Literature LOD2018

Author(s)

Organizer

Data Source

Kawashima Shuichi 川島秀一

川島秀一カワシマシュウイチ

KAWASHIMA Shuichi 川島秀一