Nakajima Yoshiki 中島芳樹

Researcher Number	60847052
Other IDs
Affiliation (Current)	2026: 岡山大学, 先鋭研究領域, 助教
Affiliation (based on the past Project Information) *help	2025: 岡山大学, 先鋭研究領域, 助教 2023 – 2024: 岡山大学, 異分野基礎科学研究所, 助教 2020 – 2022: 岡山大学, 異分野基礎科学研究所, 特任助教
Review Section/Research Field	Principal Investigator Basic Section 44030:Plant molecular biology and physiology-related Except Principal Investigator Basic Section 43040:Biophysics-related
Keywords	Principal Investigator 光合成 / マンガンクラスター / 光化学系Ii / 酸素発生 / 膜タンパク質 / 表在性サブユニット / 水分解反応 / 表在性タンパク質 / クライオ電子顕微鏡 / 光化学系II … More Except Principal Investigator … More X線自由電子レーザー / 水分解反応 / 光化学系II / 膜タンパク質 / 光合成 Less

マンガンクラスターを完全に除去した光化学系II複合体の構造基盤Principal Investigator
- Principal Investigator
  
  中島芳樹
- Project Period (FY)
  2025 – 2026
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 44030:Plant molecular biology and physiology-related
- Research Institution
  Okayama University
Elucidation of the molecular functions of extrinsic proteins in photosystem II through structural analysis by cryogenic electron microscopyPrincipal Investigator
- Principal Investigator
  
  Nakajima Yoshiki
- Project Period (FY)
  2023 – 2024
- Research Category
  
  Grant-in-Aid for Early-Career Scientists
- Review Section
  
  Basic Section 44030:Plant molecular biology and physiology-related
- Research Institution
  Okayama University
Structural analysis of the oxygen evolving center of photosystem II to gain insights into the water splitting reaction
- Principal Investigator
  
  Suga Michihiro
- Project Period (FY)
  2020 – 2022
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 43040:Biophysics-related
- Research Institution
  Okayama University

All 2025 2024 2023 2022 2021

All Journal Article Presentation Book

[Book] Photosynthesis: Molecular Approaches to Solar Energy Conversion2021
- Author(s)
  Jian-Ren Shen, Yoshiki Nakajima, Fusamichi Akita & Michihiro Suga
- Total Pages
  622
- Publisher
  Springer Cham
- ISBN
  9783030674069
- Data Source
  KAKENHI-PROJECT-20H03226
[Journal Article] Biochemical evidence for the diversity of LHCI proteins in PSI-LHCI from the red alga Galdieria sulphuraria NIES-36382025
- Author(s)
  Nagao Ryo、Ogawa Haruya、Suzuki Takehiro、Dohmae Naoshi、Kato Koji、Nakajima Yoshiki、Shen Jian-Ren
- Journal Title
  
  Photosynthesis Research
  
  Volume: 163 Issue: 1
- DOI
  10.1007/s11120-024-01134-1
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22H04916, KAKENHI-PROJECT-23K14211
[Journal Article] Structure of a photosystem II-FCPII supercomplex from a haptophyte reveals a distinct antenna organization2025
- Author(s)
  La Rocca, R.; Kato, K.; Tsai, P.-C.; Nakajima, Y.; Akita, F.; Shen, J.-R.
- Journal Title
  
  Nature communication
  
  Volume: 16 Issue: 1
- DOI
  10.1038/s41467-025-59512-9
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K14211
[Journal Article] Presence of low-energy chlorophylls d in photosystem I trimer and monomer cores isolated from Acaryochloris sp. NBRC 1028712024
- Author(s)
  Nagao Ryo、Yamamoto Haruki、Ogawa Haruya、Ito Hibiki、Yamamoto Yuma、Suzuki Takehiro、Kato Koji、Nakajima Yoshiki、Dohmae Naoshi、Shen Jian-Ren
- Journal Title
  
  Photosynthesis Research
  
  Volume: 161 Issue: 3 Pages: 203-212
- DOI
  10.1007/s11120-024-01108-3
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22H04916, KAKENHI-PROJECT-23K14211, KAKENHI-PROJECT-23K27116
[Journal Article] The structure of PSI-LHCI from <i>Cyanidium caldarium</i> provides evolutionary insights into conservation and diversity of red-lineage LHCs2024
- Author(s)
  Kato Koji、Hamaguchi Tasuku、Kumazawa Minoru、Nakajima Yoshiki、Ifuku Kentaro、Hirooka Shunsuke、Hirose Yuu、Miyagishima Shin-ya、Suzuki Takehiro、Kawakami Keisuke、Dohmae Naoshi、Yonekura Koji、Shen Jian-Ren、Nagao Ryo
- Journal Title
  
  Proceedings of the National Academy of Sciences
  
  Volume: 121 Issue: 11 Pages: 1-9
- DOI
  10.1073/pnas.2319658121
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K14211, KAKENHI-PROJECT-22KJ2017, KAKENHI-PROJECT-23K27116, KAKENHI-PROJECT-23K27121, KAKENHI-PROJECT-22H04916
[Journal Article] Structural basis for molecular assembly of fucoxanthin chlorophyll a/c-binding proteins in a diatom photosystem I supercomplex2024
- Author(s)
  Kato Koji、Nakajima Yoshiki、Xing Jian、Kumazawa Minoru、Ogawa Haruya、Shen Jian-Ren、Ifuku Kentaro、Nagao Ryo
- Journal Title
  
  eLife
  
  Volume: 13
- DOI
  10.7554/elife.99858.2
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K14211
[Journal Article] Oxygen-evolving photosystem II structures during S1-S2-S3 transitions2024
- Author(s)
  Li Hongjie、Nakajima Yoshiki、Nango Eriko、Owada Shigeki、Yamada Daichi、Tosha Takehiko、Tono Kensuke、Joti Yasumasa、Hatsui Takaki、Yabashi Makina、Kubo Minoru、Iwata So、Isobe Hiroshi、Yamaguchi Kizashi、Suga Michihiro、Shen Jian-Ren
- Journal Title
  
  Nature
  
  Volume: 626 Issue: 7999 Pages: 670-677
- DOI
  10.1038/s41586-023-06987-5
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K14211, KAKENHI-PROJECT-22K05317, KAKENHI-PROJECT-20K06238, KAKENHI-PROJECT-22H04916, KAKENHI-PLANNED-19H05777, KAKENHI-PLANNED-19H05781, KAKENHI-PLANNED-19H05784, KAKENHI-PUBLICLY-22H04754, KAKENHI-PROJECT-19H00923, KAKENHI-PLANNED-24H02262
[Journal Article] Structural insights into the action mechanisms of artificial electron acceptors in photosystem II2023
- Author(s)
  Kamada Shinji、Nakajima Yoshiki、Shen Jian-Ren
- Journal Title
  
  Journal of Biological Chemistry
  
  Volume: 299 Issue: 7 Pages: 104839-104839
- DOI
  10.1016/j.jbc.2023.104839
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K14211, KAKENHI-PROJECT-22H04916
[Journal Article] Tight association of CpcL with photosystem I in Anabaena sp. PCC 7120 grown under iron-deficient conditions2023
- Author(s)
  Shimizu Shota、Ogawa Haruya、Tsuboshita Naoki、Suzuki Takehiro、Kato Koji、Nakajima Yoshiki、Dohmae Naoshi、Shen Jian-Ren、Nagao Ryo
- Journal Title
  
  Biochimica et Biophysica Acta (BBA) - Bioenergetics
  
  Volume: 1864 Issue: 4 Pages: 148993-148993
- DOI
  10.1016/j.bbabio.2023.148993
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-23K14211, KAKENHI-PROJECT-22H04916
[Journal Article] Crystal structures of photosystem II from a cyanobacterium expressing psbA in comparison to psbA reveal differences in the D1 subunit2022
- Author(s)
  Nakajima Yoshiki、Ugai-Amo Natsumi、Tone Naoki、Nakagawa Akiko、Iwai Masako、Ikeuchi Masahiko、Sugiura Miwa、Suga Michihiro、Shen Jian-Ren
- Journal Title
  
  Journal of Biological Chemistry
  
  Volume: 298 Issue: 12 Pages: 102668-102668
- DOI
  10.1016/j.jbc.2022.102668
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-22H04916, KAKENHI-PROJECT-20H03226, KAKENHI-PUBLICLY-22H04754, KAKENHI-WRAPUP-22H04905, KAKENHI-PLANNED-17H06434, KAKENHI-PROJECT-23K21297
[Journal Article] Capturing structural changes of the S1 to S2 transition of photosystem II using time-resolved serial femtosecond crystallography2021
- Author(s)
  H Li, Y Nakajima, T Nomura, M Sugahara, S Yonekura, SK Chan, T Nakane, T Yamane, Y Umena, M Suzuki, T Masuda, T Motomura, H Naitow, Y Matsuura, T Kimura, K Tono, S Owada, Y Joti, R Tanaka, E Nango, F Akita, M Kubo, S Iwata, JR Shen and M Suga
- Journal Title
  
  IUCrJ
  
  Volume: 8 Issue: 3 Pages: 431-443
- DOI
  10.1107/s2052252521002177
- NAID
  120007037379
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-20H05446, KAKENHI-PROJECT-18K06158, KAKENHI-ORGANIZER-17H06433, KAKENHI-PLANNED-19H05781, KAKENHI-PLANNED-19H05784, KAKENHI-PROJECT-19H00923, KAKENHI-PROJECT-20H03226, KAKENHI-PROJECT-20K06238, KAKENHI-PLANNED-17H06434, KAKENHI-PLANNED-19H05777
[Presentation] Structural changes and functional implications of extrinsic protein detachment and reconstitution in photosystem II revealed by X-ray crystallography2025
- Author(s)
  Yoshiki Nakajima1, Koji Kato1, Jian-Ren Shen1 and Ryo Nagao
- Organizer
  第65回日本植物生理学会
- Data Source
  KAKENHI-PROJECT-23K14211
[Presentation] Different binding modes of herbicides in photosystem II revealed by crystal structure analysis2024
- Author(s)
  Yoshiki Nakajima, Naoki Matsubara, Jian Ren-Shen
- Organizer
  2nd AOICP
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K14211
[Presentation] X-ray crystallography of photosystem II complex in which calcium of the manganese cluster is replaced by yttrium2024
- Author(s)
  Yoshiki Nakajima, Hajime Fujii, Chunxi Zhang, Jian-Ren Shen
- Organizer
  IPS-24/ICARP2024
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-23K14211
[Presentation] Conformational changes induced by detachment and reconstruction of extrinsic proteins in photosystem II complex2024
- Author(s)
  Yoshiki Nakajima, Koji Kato, Jian-Ren Shen and Ryo Nagao
- Organizer
  第65回日本植物生理学会年会
- Data Source
  KAKENHI-PROJECT-23K14211
[Presentation] 除草剤が結合した光化学系IIの結晶構造解析2023
- Author(s)
  中島芳樹，松原直輝，沈建仁
- Organizer
  日本結晶学会年会および会員総会
- Data Source
  KAKENHI-PROJECT-23K14211
[Presentation] 表在性タンパク質を再構成させた光化学系II複合体の結晶構造解析2023
- Author(s)
  中島芳樹、沈建仁、長尾遼
- Organizer
  第13回日本光合成学会年会およびシンポジウム
- Data Source
  KAKENHI-PROJECT-23K14211
[Presentation] X線自由電子レーザーを用いた解析におる光化学系IIの基質水分子の取り込みと水分子の酸化に関する構造的知見2022
- Author(s)
  菅倫寛, 中島芳樹, リホンジェ, 沈建仁
- Organizer
  第60回生物物理学会年会
- Data Source
  KAKENHI-PROJECT-20H03226
[Presentation] Crystal structure analyses of photosystem II isolated from Thermosynechococcus elongatus mutants expressing only psbA2 or psbA3 genes as the D1 protein.2022
- Author(s)
  Nakajima Y., Ugai-Amo N., Tone N., Nakagawa A., Iwai M., Sugiura M., Ikeuchi M., Suga M. and Shen J. -R.
- Organizer
  18th International Congress on Photosynthesis Research, Dunedin, New Zealand.
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20H03226
[Presentation] 光化学系IIのS状態遷移及び結晶品質における界面活性剤の影響2022
- Author(s)
  中島芳樹、菅倫寛、沈建仁
- Organizer
  第63回植物生理学会年会
- Data Source
  KAKENHI-PROJECT-20H03226
[Presentation] X-ray free electron lasers reveal the molecular mechanism for water oxidation in photosystem II2021
- Author(s)
  Michi Suga, Yoshiki Nakajima, Hongjie Li, Jian-Ren Shen
- Organizer
  第59回日本生物物理学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-20H03226
[Presentation] Capturing structural changes of photosystem II using time-resolved serial femtosecond crystallography2021
- Author(s)
  Hongjie Li, Yoshiki Nakajima, Jian-Ren Shen and Michihiro Suga
- Organizer
  PDB50 Anniversary Symposium in Asia
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20H03226

1. Suga Michihiro (60634920)

# of Collaborated Projects: 1 results

# of Collaborated Products: 8 results
2. 長尾遼

# of Collaborated Projects: 0 results

# of Collaborated Products: 2 results
3. 沈建仁

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results

Nakajima Yoshiki 中島 芳樹

Research Projects

Research Products

Co-Researchers

マンガンクラスターを完全に除去した光化学系II複合体の構造基盤Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Elucidation of the molecular functions of extrinsic proteins in photosystem II through structural analysis by cryogenic electron microscopyPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Structural analysis of the oxygen evolving center of photosystem II to gain insights into the water splitting reaction

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Book] Photosynthesis: Molecular Approaches to Solar Energy Conversion2021

Author(s)

Total Pages

Publisher

ISBN

Data Source

[Journal Article] Biochemical evidence for the diversity of LHCI proteins in PSI-LHCI from the red alga Galdieria sulphuraria NIES-36382025

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Structure of a photosystem II-FCPII supercomplex from a haptophyte reveals a distinct antenna organization2025

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Presence of low-energy chlorophylls d in photosystem I trimer and monomer cores isolated from Acaryochloris sp. NBRC 1028712024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] The structure of PSI-LHCI from <i>Cyanidium caldarium</i> provides evolutionary insights into conservation and diversity of red-lineage LHCs2024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Structural basis for molecular assembly of fucoxanthin chlorophyll a/c-binding proteins in a diatom photosystem I supercomplex2024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Oxygen-evolving photosystem II structures during S1-S2-S3 transitions2024

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Structural insights into the action mechanisms of artificial electron acceptors in photosystem II2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Tight association of CpcL with photosystem I in Anabaena sp. PCC 7120 grown under iron-deficient conditions2023

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Crystal structures of photosystem II from a cyanobacterium expressing psbA in comparison to psbA reveal differences in the D1 subunit2022

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Capturing structural changes of the S1 to S2 transition of photosystem II using time-resolved serial femtosecond crystallography2021

Author(s)

Journal Title

DOI

NAID

Data Source

[Presentation] Structural changes and functional implications of extrinsic protein detachment and reconstitution in photosystem II revealed by X-ray crystallography2025

Nakajima Yoshiki 中島芳樹