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Shiomi Akifumi  塩見 晃史

ORCIDConnect your ORCID iD *help
Researcher Number 60880557
Other IDs
Affiliation (Current) 2025: 京都大学, 白眉センター, 特定准教授
2025: 京都大学, 医生物学研究所, 特定准教授
2025: 国立研究開発法人理化学研究所, 開拓研究本部, 基礎科学特別研究員
Affiliation (based on the past Project Information) *help 2022 – 2025: 国立研究開発法人理化学研究所, 開拓研究本部, 基礎科学特別研究員
2021: 国立研究開発法人理化学研究所, 開拓研究本部, 特別研究員
Review Section/Research Field
Principal Investigator
Transformative Research Areas, Section (III) / Basic Section 44010:Cell biology-related
Except Principal Investigator
Medium-sized Section 59:Sports sciences, physical education, health sciences, and related fields / Medium-sized Section 28:Nano/micro science and related fields
Keywords
Principal Investigator
細胞老化 / トラックエッチド膜 / エレクトロポレーション / 遺伝子発現 / 変形能 / 細胞表面張力 / 機械特性 / 1細胞RNA-seq / オルガノイド / 細胞集団ダイナミクス … More / 1細胞RNAシーケンシング / 老化 / 膜張力 / オミックス解析 … More
Except Principal Investigator
骨格筋幹細胞 / 膜脂質動態 / 超解像イメージング / 細胞融合 / 脂質動態 / 骨格筋再生 / 筋管形成 / 細胞分裂 / 筋衛星細胞 / リン脂質 / 造血幹細胞 / 電気泳動 / オミクス / マイクロ流体工学 / RNA-sequencing / 1細胞 Less
  • Research Projects

    (6 results)
  • Research Products

    (21 results)
  • Co-Researchers

    (10 People)
  •  細胞の力学特性から解き明かす細胞競合Principal Investigator

    • Principal Investigator
      塩見 晃史
    • Project Period (FY)
      2025 – 2027
    • Research Category
      Grant-in-Aid for Early-Career Scientists
    • Review Section
      Basic Section 44010:Cell biology-related
    • Research Institution
      Institute of Physical and Chemical Research
  •  多細胞が織りなす協調的な力学秩序解析法の開発Principal Investigator

    • Principal Investigator
      塩見 晃史
    • Project Period (FY)
      2025 – 2026
    • Research Category
      Grant-in-Aid for Transformative Research Areas (A)
    • Review Section
      Transformative Research Areas, Section (III)
    • Research Institution
      Institute of Physical and Chemical Research
  •  細胞の遺伝子発現と力学的境界条件が織りなすオルガノイドの生体秩序Principal Investigator

    • Principal Investigator
      塩見 晃史
    • Project Period (FY)
      2023 – 2024
    • Research Category
      Grant-in-Aid for Transformative Research Areas (A)
    • Review Section
      Transformative Research Areas, Section (III)
    • Research Institution
      Institute of Physical and Chemical Research
  •  1細胞の機械特性と遺伝子発現解析の統合Principal Investigator

    • Principal Investigator
      塩見 晃史
    • Project Period (FY)
      2022 – 2024
    • Research Category
      Grant-in-Aid for Early-Career Scientists
    • Review Section
      Basic Section 44010:Cell biology-related
    • Research Institution
      Institute of Physical and Chemical Research
  •  Measurement of single-cell dynamics with nanoelectroporation

    • Principal Investigator
      Shintaku Hirofumi
    • Project Period (FY)
      2021 – 2023
    • Research Category
      Grant-in-Aid for Challenging Research (Pioneering)
    • Review Section
      Medium-sized Section 28:Nano/micro science and related fields
    • Research Institution
      Kyoto University
      Institute of Physical and Chemical Research
  •  脂質分子動態に基づく骨格筋再生機構の全容解明

    • Principal Investigator
      原 雄二
    • Project Period (FY)
      2021 – 2024
    • Research Category
      Fund for the Promotion of Joint International Research (Fostering Joint International Research (B))
    • Review Section
      Medium-sized Section 59:Sports sciences, physical education, health sciences, and related fields
    • Research Institution
      University of Shizuoka

All 2024 2023 2022 2021

All Journal Article Presentation

  • [Journal Article] High-throughput mechanical phenotyping and transcriptomics of single cells2024

    • Author(s)
      Shiomi Akifumi、Kaneko Taikopaul、Nishikawa Kaori、Tsuchida Arata、Isoshima Takashi、Sato Mayuko、Toyooka Kiminori、Doi Kentaro、Nishikii Hidekazu、Shintaku Hirofumi
    • Journal Title

      Nature Communications

      Volume: 15 Issue: 1 Pages: 1-13

    • DOI

      10.1038/s41467-024-48088-5

    • Peer Reviewed / Open Access
    • Data Source
      KAKENHI-PROJECT-21KK0174, KAKENHI-PROJECT-21K18194
  • [Presentation] ELASTomics: Combined analysis of mechanical phenotype of cellular surface and transcriptome at single-cell resolution2023

    • Author(s)
      Akifumi Shiomi, Taikopaul Kaneko, Kaori Nishikawa, Hirofumi Shintaku
    • Organizer
      Physics and Chemistry of Microfluidics Gordon Research Seminar
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K18194
  • [Presentation] ELASTOMICS: HIGH-THROUGHPUT MECHANICAL PHENOTYPING AND TRANSCRIPTOMICS OF SINGLE CELLS2023

    • Author(s)
      塩見晃史, 金子泰洸ポール, 西川香里, 新宅博文
    • Organizer
      microTAS 2023
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22K15113
  • [Presentation] 細胞力学と遺伝子発現の統合解析2023

    • Author(s)
      塩見晃史, 金子泰洸ポール, 西川香里, 新宅博文
    • Organizer
      日本生物物理学会第61回年会
    • Invited
    • Data Source
      KAKENHI-PROJECT-22K15113
  • [Presentation] ELASTomics: Combined analysis of mechanical phenotype of cellular surface and transcriptome at single-cell resolution2023

    • Author(s)
      塩見晃史, 金子泰洸ポール, 西川香里, 新宅博文
    • Organizer
      2023 Physics and Chemistry of Microfluidics Gordon Research Seminar
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-23H04724
  • [Presentation] ELASTomics: Combined analysis of mechanical phenotype of cellular surface and transcriptome at single-cell resolution2023

    • Author(s)
      塩見晃史, 金子泰洸ポール, 西川香里, 新宅博文
    • Organizer
      2023 Physics and Chemistry of Microfluidics Gordon Research Conference
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-23H04724
  • [Presentation] ELASTomics: Combined analysis of mechanical phenotype of cellular surface and transcriptome at single-cell resolution2023

    • Author(s)
      塩見晃史, 金子泰洸ポール, 西川香里, 新宅博文
    • Organizer
      2023 Physics and Chemistry of Microfluidics Gordon Research Seminar
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22K15113
  • [Presentation] ELASTomics: Combined analysis of mechanical phenotype of cellular surface and transcriptome at single-cell resolution2023

    • Author(s)
      塩見晃史, 金子泰洸ポール, 西川香里, 新宅博文
    • Organizer
      2023 Physics and Chemistry of Microfluidics Gordon Research Conference
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-22K15113
  • [Presentation] ELASTOMICS: HIGH-THROUGHPUT MECHANICAL PHENOTYPING AND TRANSCRIPTOMICS OF SINGLE CELLS2023

    • Author(s)
      塩見晃史, 金子泰洸ポール, 西川香里, 新宅博文
    • Organizer
      microTAS 2023
    • Int'l Joint Research
    • Data Source
      KAKENHI-PUBLICLY-23H04724
  • [Presentation] ELASTomics: High-throughput mechanical phenotyping and transcriptomics of single cells2023

    • Author(s)
      Akifumi Shiomi, Taikopaul Kaneko, Kaori Nishikawa, and Hirofumi Shintaku
    • Organizer
      The 27th International Conference on Miniaturized Systems for Chemistry and Life Sciences (uTAS 2023)
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K18194
  • [Presentation] ELASTomics: Combined analysis of mechanical phenotype of cellular surface and transcriptome at single-cell resolution2023

    • Author(s)
      Akifumi Shiomi, Taikopaul Kaneko, Kaori Nishikawa, Hirofumi Shintaku
    • Organizer
      Physics and Chemistry of Microfluidics Gordon Research Conference
    • Int'l Joint Research
    • Data Source
      KAKENHI-PROJECT-21K18194
  • [Presentation] 細胞力学と遺伝子発現の統合解析2023

    • Author(s)
      塩見晃史, 金子泰洸ポール, 西川香里, 新宅博文
    • Organizer
      日本生物物理学会第61回年会
    • Invited
    • Data Source
      KAKENHI-PUBLICLY-23H04724
  • [Presentation] Nanopore electroporation enables profiling cell surface tension and gene expression at single-cell resolution2023

    • Author(s)
      Hirofumi Shintaku, Akifumi Shiomi, Taikopaul Kaneko, Kaori, Nishikawa
    • Organizer
      the 61th Annual Meeting of the Biophysical Society of Japan
    • Invited
    • Data Source
      KAKENHI-PROJECT-21K18194
  • [Presentation] 老化における細胞の膜張力と遺伝子発現の統合解析2022

    • Author(s)
      塩見 晃史,金子 泰洸ポール,西川 香里,新宅 博文
    • Organizer
      第13回マイクロ・ナノ工学シンポジウム
    • Data Source
      KAKENHI-PROJECT-21K18194
  • [Presentation] 微小電気穿孔法を用いた細胞の膜張力と遺伝子発現の統合解析2022

    • Author(s)
      塩見 晃史,金子 泰洸ポール,西川 香里,新宅 博文
    • Organizer
      シングルゲノミクス研究会2022
    • Data Source
      KAKENHI-PROJECT-21K18194
  • [Presentation] 細胞の機械特性と遺伝子発現の統合解析2022

    • Author(s)
      塩見 晃史,金子 泰洸ポール,西川 香里,新宅 博文
    • Organizer
      第95回日本生化学会大会
    • Data Source
      KAKENHI-PROJECT-21K18194
  • [Presentation] 細胞の機械特性と遺伝子発現の統合解析2022

    • Author(s)
      塩見晃史、金子泰洸ポール、西川香里、新宅博文
    • Organizer
      第95回日本生化学会大会
    • Data Source
      KAKENHI-PROJECT-22K15113
  • [Presentation] 微小電気穿孔法を用いた細胞の膜張力と遺伝子発現の統合解析2022

    • Author(s)
      塩見晃史、金子泰洸ポール、西川香里、新宅博文
    • Organizer
      シングルセルゲノミクス研究会2022FES
    • Data Source
      KAKENHI-PROJECT-22K15113
  • [Presentation] 老化における細胞の膜張力と遺伝子発現の統合解析2022

    • Author(s)
      塩見晃史、金子泰洸ポール、西川香里、新宅博文
    • Organizer
      第13回マイクロ・ナノ工学シンポジウム
    • Data Source
      KAKENHI-PROJECT-22K15113
  • [Presentation] トランスクリプトーム解析を組み合わせた細胞膜の機械特性計測2021

    • Author(s)
      塩見 晃史,金子 泰洸ポール,西川 香里,新宅 博文
    • Organizer
      日本機械学会 2021年度年次大会
    • Data Source
      KAKENHI-PROJECT-21K18194
  • [Presentation] A combined analysis of membrane-mechanical phenotyping and transcriptomics using nanoelectroporation2021

    • Author(s)
      塩見 晃史,金子 泰洸ポール,西川 香里,新宅 博文
    • Organizer
      第59回日本生物物理学会年会
    • Data Source
      KAKENHI-PROJECT-21K18194
  • 1.  Shintaku Hirofumi (80448050)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 9 results
  • 2.  口丸 高弘 (10570591)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 3.  錦井 秀和 (30512834)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 4.  金子 泰洸ポール (80873504)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 9 results
  • 5.  鳥井 孝太郎 (80878463)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 6.  原 雄二 (60362456)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 7.  安部 真人 (30543425)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 8.  神谷 厚輝 (70612315)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 9.  北嶋 康雄 (70734416)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results
  • 10.  鈴木 美希 (00740200)
    # of Collaborated Projects: 1 results
    # of Collaborated Products: 0 results

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