Hayashi Takeshi 林武司

… Alternative Names

林武司ハヤシタケシ

HAYASHI Takeshi 林武司

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Researcher Number	70370674
Other IDs
Affiliation (Current)	2025: 国立研究開発法人農業・食品産業技術総合研究機構, 農業情報研究センター, 再雇用職員
Affiliation (based on the past Project Information) *help	2021: 国立研究開発法人農業・食品産業技術総合研究機構, 次世代作物開発研究センター, ユニット長 2019: 国立研究開発法人農業・食品産業技術総合研究機構, 次世代作物開発研究センター, ユニット長 2015: 国立研究開発法人農業・食品産業技術総合研究機構, 中央農業総合研究センター, 上席研究員 2014: 独立行政法人農業・食品産業技術総合研究機構, その他部局等, 研究員 2011 – 2013: 独立行政法人農業・食品産業技術総合研究機構, 中央農業総合研究センター, 上席研究員 … More 2012: 独立行政法人農業・食品産業技術総合研究機構, 中央農業総合研究センター情報利用研究領域, 上席研究員 2010: 独立行政法人農業・食品産業技術総合研究機構, 中央農業総合研究センター・データマイイング研究チーム, チーム長 2009: 独立行政法人農業環境技術研究所, 動物科学研究領域, 主任研究員 2007 – 2009: 独立行政法人農業生物資源研究所, 動物科学研究領域, 主任研究員 Less
Review Section/Research Field	Except Principal Investigator Basic Section 39030:Horticultural science-related / Science in genetics and breeding / Breeding science / Crop science/Weed science
Keywords	Except Principal Investigator イネ / ゲノミックセレクション / ゲノム育種 / 環境応答 / モデル化 / 相関ネットワーク / オーミクス / ゲノム情報 / 食味（おいしさ） / 味覚センサー … More / GC-MS / RNA-seq / SNPs / ゲノムシークエンス / オミクス解析 / 果皮色 / 果実重 / 味覚 / 香気成分 / 有機酸 / 糖 / 発現遺伝子 / トランスオミクス / 食味関連遺伝子 / メタボロミクス / 味・香り / 高精度ゲノム / ネットワーク解析 / eGWAS / TWAS / GWAS / 糖・有機酸 / 統合オミクス / 食味科学 / おいしさ / 香り / 味 / 果実 / 作物モデル / 気候変動 / 遺伝子 / ゲノム / 育種学 / 組換え近交系 / 予測モデル / 作物生育モデル / 収量構成要素 / 出穂 / 選抜方法 / 量的形質遺伝子座(QTL) / 機械学習 / 一塩基多型（SNP） / 量的遺伝子座（QTL） / 選抜方式 / 作物育種 / 育種シミュレーション / 一塩基多型(SNP) / 量的遺伝子座(QTL) / 遺伝 / 植物育種 / 早晩性 / 遺伝学 / 発育生理学 Less

Comprehensive analysis of fruit taste and aroma regulator genes using fig genetic resources and its expansion to the science of taste
- Principal Investigator
  
  IKEGAMI HIDETOSHI
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Review Section
  
  Basic Section 39030:Horticultural science-related
- Research Institution
  Fukuoka Agricultural and Forestry Research Center
Development of an integrated modeling method for developing environmentally adaptable varieties
- Principal Investigator
  
  Iwata Hiroyoshi
- Project Period (FY)
  2013 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Science in genetics and breeding
- Research Institution
  The University of Tokyo
Development of an innovative crop breeding system utilizing genomic selection
- Principal Investigator
  
  IWATA Hiroyoshi
- Project Period (FY)
  2010 – 2012
- Research Category
  
  Grant-in-Aid for Scientific Research (B)
- Research Field
  
  Breeding science
- Research Institution
  The University of Tokyo
Analysis of genetic mechanism determining the crop environmental response by coordinating crop growth model and genetic model
- Principal Investigator
  
  HASEGAWA Toshihiro
- Project Period (FY)
  2007 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research (A)
- Research Field
  
  Crop science/Weed science
- Research Institution
  National Institute for Agro-Environmental Sciences

All 2021 2020 2019 2016 2015 2014 2013 2012 2011 2010 2008 Other

All Journal Article Presentation

[Journal Article] Analysis of the Segregation Distortion of FcRAN1 Genotypes Based on Whole-Genome Resequencing of Fig (Ficus carica L.) Breeding Parents2021
- Author(s)
  Ikegami Hidetoshi, Shirasawa Kenta, Yakushiji Hiroshi, Yabe Shiori, Sato Masaru, Hayashi Takeshi, Tashiro Kosuke, Nogata Hitoshi
- Journal Title
  
  Frontiers in Plant Science
  
  Volume: 12
- DOI
  10.3389/fpls.2021.647599
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19H02952
[Journal Article] Island-model genomic selection for long-term genetic improvement of autogamous crops2016
- Author(s)
  Shiori Yabe, Masanori Yamasaki, Kaworu Ebana, Takeshi Hayashi, Hiiroyoshi Iwata
- Journal Title
  
  PLoS ONE
  
  Volume: 11(4) Issue: 4 Pages: e0153945-e0153945
- DOI
  10.1371/journal.pone.0153945
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-25252002
[Journal Article] Genomics-assisted breeding in fruit trees2016
- Author(s)
  Hiroyoshi Iwata, Mai F. Minamikawa, Hiromi Kajiya-Kanegae, Motoyuki Ishimori, Takeshi Hayashi
- Journal Title
  
  Breeding Science
  
  Volume: 66 Issue: 1 Pages: 100-115
- DOI
  10.1270/jsbbs.66.100
- NAID
  130005141822
- ISSN
  1344-7610, 1347-3735
- Language
  English
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-25252002
[Journal Article] Toward integration of genomic selection with crop modelling: the development of an integrated approach to predicting rice heading dates2016
- Author(s)
  Akio Onogi, Maya Watanabe, Toshihiro Mochizuki, Takeshi Hayashi, Hiroshi Nakagawa, Toshihiro Hasegawa, Hiroyoshi Iwata
- Journal Title
  
  Theoretical and Applied Genetics
  
  Volume: 129 Issue: 4 Pages: 805-817
- DOI
  10.1007/s00122-016-2667-5
- Peer Reviewed / Acknowledgement Compliant
- Data Source
  KAKENHI-PROJECT-25252002
[Journal Article] Genomic Prediction of Biological Shape: Elliptic Fourier Analysis and Kernel Partial Least Squares (PLS) Regression Applied to Grain Shape Prediction in Rice (Oryza sativa L.)2015
- Author(s)
  Hiroyoshi Iwata, Kaworu Ebana, Yusaku Uga, Takeshi Hayashi
- Journal Title
  
  PLoS ONE
  
  Volume: 10(3) Issue: 3 Pages: e0120610-e0120610
- DOI
  10.1371/journal.pone.0120610
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-25252002
[Journal Article] Introduction to large-scale omics data analysis for plant breeding2014
- Author(s)
  小林正明, 大柳一, 矢野健太郎, 岩田洋佳
- Journal Title
  
  Breeding Research
  
  Volume: 16 Issue: 2 Pages: 93-99
- DOI
  10.1270/jsbbr.16.93
- NAID
  130004438693
- ISSN
  1344-7629, 1348-1290
- Language
  Japanese
- Open Access
- Data Source
  KAKENHI-PROJECT-25252002
[Journal Article] A Bayesian method and its variational approximation for prediction of genomic breeding values in multiple traits2013
- Author(s)
  Hayashi T, Iwata H
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 14 Issue: 1 Pages: 34-34
- DOI
  10.1186/1471-2105-14-34
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22380010
[Journal Article] Potential assessment of genome- wide association study and genomic selection in Japanese pear Pyrus pyrifolia2013
- Author(s)
  Iwata H, Hayashi T, Terakami S, TakadaN, Sawamura Y, Yamamoto T
- Journal Title
  
  Breeding Science
  
  Volume: 63 Pages: 125-140
- NAID
  10031151532
- Data Source
  KAKENHI-PROJECT-22380010
[Journal Article] Potential assessment of genome-wide association study and genomic selection in Japanese pear <i>Pyrus pyrifolia</i>2013
- Author(s)
  Iwata H, Hayashi T, Terakami S, Takada N, Sawamura Y, Yamamoto T
- Journal Title
  
  Breeding Science
  
  Volume: 63 Issue: 1 Pages: 125-140
- DOI
  10.1270/jsbbs.63.125
- NAID
  10031151532
- ISSN
  1344-7610, 1347-3735
- Language
  English
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22380010
[Journal Article] A Bayesian methodand its variational approximation for prediction of genomic breeding values in multiple traits2013
- Author(s)
  Hayashi T, Iwata H
- Journal Title
  
  BMC Bioinformatics
  
  Volume: 14 Pages: 34-34
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22380010
[Journal Article] Prospects for genomic selection in conifer breeding : a simulation study of Cryptomeria japonica2011
- Author(s)
  Iwata H, Hayashi T, Tsumura Y
- Journal Title
  
  Tree Genetics & Genomes
  
  Volume: 7 Issue: 4 Pages: 747-758
- DOI
  10.1007/s11295-011-0371-9
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-22380010
[Journal Article] DNAマーカーの育種への利用について-DNAマーカー育種の基礎と応用、そして将来展望-2011
- Author(s)
  福田篤徳、田中淳一、平林秀介、福岡修一、トラ田淳史、岩田洋佳
- Journal Title
  
  Techno Innovation
  
  Volume: 77 Pages: 36-45
- Data Source
  KAKENHI-PROJECT-22380010
[Journal Article] A Bayesian method for simultaneously detectingg mendelian and imprinted quantitative trait loci in experimental crosses of outbred species2008
- Author(s)
  Hayashi T.
- Journal Title
  
  Genetics 178
  
  Pages: 527-538
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19208003
[Journal Article] A Bayesian method for simultaneously detecting mendelian and imprinted quantitative trait loci in experimental crosses of outbred species2008
- Author(s)
  Hayashi, T.
- Journal Title
  
  Genetics 178
  
  Pages: 527-538
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-19208003
[Presentation] 高解像全ゲノム関連解析によるイチジク果皮色形質原因遺伝子候補の同定2021
- Author(s)
  池上秀利・矢部志央理・林武司・白澤健太・吉川郁恵・石橋美咲・白武勝裕・佐藤大・田代康介・野方仁
- Organizer
  令和3年度園芸学会秋季大会
- Data Source
  KAKENHI-PROJECT-19H02952
[Presentation] イチジクFcRAN1座アレルにおける分離比歪みの観察とその遺伝的要因の解析2020
- Author(s)
  池上秀利, 白澤健太, 薬師寺博, 矢部志央理, 佐藤大, 林武司, 田代康介, 野方仁
- Organizer
  日本育種学会第138回講演会（令和2年度秋季大会）
- Data Source
  KAKENHI-PROJECT-19H02952
[Presentation] イチジクのゲノミック予測に基づくF1分離予測2019
- Author(s)
  矢部志央理, 白澤健太, 池上秀利, 姫野修一, 野方仁, 田代康介, 林武司
- Organizer
  日本育種学会　第136回講演会（令和元年度秋季大会）
- Data Source
  KAKENHI-PROJECT-19H02952
[Presentation] イネのバイオマスと収量を予測する：作物モデルとゲノム予測モデルを融合した新しいモデル2016
- Author(s)
  戸田悠介、若月ひとみ、江花薫子、山崎将紀、鐘ケ江弘美、林武司、中川博視、長谷川利拡、岩田洋佳
- Organizer
  日本育種学会第129回講演会
- Place of Presentation
  横浜市立大学 (横浜市金沢区)
- Year and Date
  2016-03-21
- Data Source
  KAKENHI-PROJECT-25252002
[Presentation] Genomic prediction of trait segregation in progeny populations: examples in Japanese pear and rice2013
- Author(s)
  Iwata H, Hayashi T, Yoshioka T, Yamasaki M, Ebana K, Terakami S, Takada N, Saito T, Yamamoto T
- Organizer
  Plant and Animal Genome XXI
- Place of Presentation
  アメリカ合衆国、サンディエゴ
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] ゲノミックセレクションモデルに基づくイネF2集団における出穂期分離の予測2013
- Author(s)
  岩田洋佳、吉岡拓磨、小野木章雄、江花薫子、林武司、山崎将紀
- Organizer
  日本育種学会　第123回講演会
- Place of Presentation
  東京農業大学（東京）
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] ゲノムワイドモデルおよびQTLモデルを用いたイネ戻し交雑近交系の開花フェノロジー予測2013
- Author(s)
  渡部真哉、望月俊宏、林武司、中川博視、長谷川利拡、岩田洋佳
- Organizer
  日本育種学会　第123回講演会
- Place of Presentation
  東京農業大学（東京）
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] Building a better model for predicting biological shapes based on genomic data.2013
- Author(s)
  Hiroyoshi Iwata, Kaworu Ebana, Yusaku Uga, Takeshi Hayashi
- Organizer
  The 3rd International Symposium of Biological Shape Analysis (ISBSA)
- Place of Presentation
  Univ. of Tokyo (Tokyo)
- Data Source
  KAKENHI-PROJECT-25252002
[Presentation] 循環ゲノミックセレクションを用いた並列育種：イネにおけるシミュレーション2013
- Author(s)
  矢部志央理、山崎将紀、江花薫子、林武司、岩田洋佳
- Organizer
  日本育種学会第124回講演会
- Place of Presentation
  鹿児島大学（鹿児島県）
- Data Source
  KAKENHI-PROJECT-25252002
[Presentation] ゲノム情報から形態を予測する2013
- Author(s)
  岩田洋佳、江花薫子、宇賀優作、林武司
- Organizer
  日本生態学会第60回大会
- Place of Presentation
  静岡県コンペンションアーツセンター（静岡）
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] ゲノミクスとモルフォメトリクスの融合：植物形状の体系的改良に向けて2012
- Author(s)
  岩田洋佳、江花薫子、宇賀優作、林武司
- Organizer
  第22回　日本数理生物学会　年会
- Place of Presentation
  岡山大学津島キャンパス（岡山）
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] 推定ハプロタイプ情報を用いたゲノミックセレクションの精度：ニホンナシデータにおける検証2012
- Author(s)
  岩田洋佳、林武司、寺上伸吾、高田教臣、斎藤寿広、山本俊哉
- Organizer
  日本育種学会　第122回講演会
- Place of Presentation
  京都産業大学（京都）
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] Genomic prediction of promising crosses based on genome-wide marker and phenotype data of parental varieties: a case study in Japanese pear Pyrus pyrifolia2012
- Author(s)
  Iwata H, Hayashi T, Terakami S, Takada N, Saito T, Yamamoto T
- Organizer
  XVth Meeting of the EUCARPIA Section - Biometrics in Plant Breeding -
- Place of Presentation
  ドイツ、シュツットガルト
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] Accuracy of genomic selection in rice breeding ; simulations and cross-validation2011
- Author(s)
  Iwata H, Ebana K, Yamasaki M, Ideta O, Taguchi-Shiobara F, Hayashi T
- Organizer
  Plant and Animal Genome XIX
- Place of Presentation
  サンディエゴ・タウンアンドカントリーホテルUSA
- Year and Date
  2011-01-16
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] Integration of Genomics and Morphometrics Approaches Toward Systematic Plant Shape Improvement2011
- Author(s)
  Iwata H, Ebana K, Uga Y, Hayashi T
- Organizer
  2nd ISBSA
- Place of Presentation
  沖縄県男女共同参画センターてぃるる(沖縄県)
- Year and Date
  2011-09-09
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] Non-MCMC methods for effective Bayesian analysis of high-dimensional genomic data2011
- Author(s)
  Hayashi T, Iwata H
- Organizer
  Plant and Animal Genome XIX
- Place of Presentation
  サンディエゴ・タウンアンドカントリーホテルUSA
- Year and Date
  2011-01-16
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] コメ粒形のゲノムワイドアソシエーション解析とゲノム情報に基づく予測2011
- Author(s)
  岩田洋佳, 江花薫子、宇賀優作、林武司
- Organizer
  日本育種学会第120回公演会
- Place of Presentation
  福井県立大学(福井県)
- Year and Date
  2011-09-24
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] イネ育種におけるゲノミックセレクションの精度:シミュレーションと実データによる評価2011
- Author(s)
  岩田洋佳、井下侑人、江花薫子、山崎将紀、出田収、田口(塩原)文緒、林武司
- Organizer
  日本育種学会
- Place of Presentation
  横浜市立大
- Year and Date
  2011-03-29
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] Non-MCMC methods for effective Bayesian analysis of high-dimensional genomic data2011
- Author(s)
  Hayashi T, Iwata H
- Organizer
  Plant and Animal Genome XIX
- Place of Presentation
  アメリカ合衆国、サンディエゴ
- Year and Date
  2011-01-16
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] Integration of Genomics and Morphometrics Approaches Toward Systematic Plant Shape Improvement2011
- Author(s)
  Iwata H, Ebana K, Uga Y, Hayashi T
- Organizer
  2nd ISBSA
- Place of Presentation
  沖縄県男女共同参画センターてぃるる(沖縄県)
- Year and Date
  2011-09-09
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] ゲノムワイドマーカー利用育種に向けて:ゲノムワイドアソシエーション研究とゲノミックセレクション2011
- Author(s)
  岩田洋佳、江花薫子、宇賀優作、林武司
- Organizer
  個体群生態学会第27回大会
- Place of Presentation
  岡山大学(岡山県)
- Year and Date
  2011-10-16
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] イネ育苗期おける二酸化炭素濃度上昇の応答に関するQTLsの検出2010
- Author(s)
  程為国・酒井英光・林武司・長谷川利拡
- Organizer
  日本作物学会第229回講演会
- Place of Presentation
  宇都宮大学農学部
- Year and Date
  2010-03-30
- Data Source
  KAKENHI-PROJECT-19208003
[Presentation] ベイズ手法を用いた遺伝育種研究2010
- Author(s)
  林武司
- Organizer
  日本計量生物学会
- Place of Presentation
  統計数理研究所
- Year and Date
  2010-05-22
- Data Source
  KAKENHI-PROJECT-22380010
[Presentation] イネ育苗期おける二酸化炭素濃度上昇の応答に関するqtlsの検出2010
- Author(s)
  程為国・酒井英光・林武司・長谷川利拡
- Organizer
  日本作物学会第229回講演会
- Place of Presentation
  宇都宮大学農学部
- Year and Date
  2010-03-30
- Data Source
  KAKENHI-PROJECT-19208003
[Presentation] 作物モデルとゲノムワイド予測モデルを組み合わせた新たな統計学的モデル:イネ出穂期予測への適用
- Author(s)
  小野木章雄, 渡辺真哉, 望月俊宏, 林武司, 中川博視, 長谷川利拡, 岩田洋佳
- Organizer
  日本育種学会第126回講演会
- Place of Presentation
  南九州大学（宮崎県、都城市）
- Year and Date
  2014-09-26 – 2014-09-27
- Data Source
  KAKENHI-PROJECT-25252002
[Presentation] ゲノムワイドマーカーを用いて生物のかたちを予測する：玄米形予測への適用
- Author(s)
  岩田洋佳、江花薫子、宇賀優作、林武司
- Organizer
  第23回数理生物学会大会
- Place of Presentation
  静岡大学（静岡県）
- Invited
- Data Source
  KAKENHI-PROJECT-25252002

1. IWATA Hiroyoshi (00355489)

# of Collaborated Projects: 3 results

# of Collaborated Products: 28 results
2. HASEGAWA Toshihiro (10228455)

# of Collaborated Projects: 2 results

# of Collaborated Products: 5 results
3. NAKAGAWA Hiroshi (90207738)

# of Collaborated Projects: 2 results

# of Collaborated Products: 3 results
4. EBANA Kaworu (00370643)

# of Collaborated Projects: 2 results

# of Collaborated Products: 16 results
5. MOCHIZUKI Toshihiro (60239572)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. OHSAWA Ryo (80211788)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. NIMOMIYA Seishi (90355488)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. YAMASAKI Masanori (00432550)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
9. IKEGAMI HIDETOSHI (40502414)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
10. 田代康介 (00192170)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
11. 佐藤大 (30454052)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
12. 白澤健太 (60527026)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results
13. 矢部志央理 (60767771)

# of Collaborated Projects: 1 results

# of Collaborated Products: 4 results

Hayashi Takeshi 林 武司

林 武司 ハヤシ タケシ

HAYASHI Takeshi 林 武司

Research Projects

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Comprehensive analysis of fruit taste and aroma regulator genes using fig genetic resources and its expansion to the science of taste

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Development of an integrated modeling method for developing environmentally adaptable varieties

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Development of an innovative crop breeding system utilizing genomic selection

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Analysis of genetic mechanism determining the crop environmental response by coordinating crop growth model and genetic model

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[Journal Article] Analysis of the Segregation Distortion of FcRAN1 Genotypes Based on Whole-Genome Resequencing of Fig (Ficus carica L.) Breeding Parents2021

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[Journal Article] Island-model genomic selection for long-term genetic improvement of autogamous crops2016

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[Journal Article] Genomics-assisted breeding in fruit trees2016

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[Journal Article] Toward integration of genomic selection with crop modelling: the development of an integrated approach to predicting rice heading dates2016

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[Journal Article] Genomic Prediction of Biological Shape: Elliptic Fourier Analysis and Kernel Partial Least Squares (PLS) Regression Applied to Grain Shape Prediction in Rice (Oryza sativa L.)2015

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[Journal Article] Introduction to large-scale omics data analysis for plant breeding2014

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[Journal Article] A Bayesian method and its variational approximation for prediction of genomic breeding values in multiple traits2013

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[Journal Article] Potential assessment of genome- wide association study and genomic selection in Japanese pear Pyrus pyrifolia2013

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[Journal Article] Potential assessment of genome-wide association study and genomic selection in Japanese pear <i>Pyrus pyrifolia</i>2013

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DOI

Hayashi Takeshi 林武司

林武司ハヤシタケシ

HAYASHI Takeshi 林武司