Katoh Kazutaka 加藤和貴

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KATOH Kazutaka 加藤和貴

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Researcher Number	70378868
Other IDs
Affiliation (Current)	2025: 大阪大学, 微生物病研究所, 准教授
Affiliation (based on the past Project Information) *help	2017 – 2023: 大阪大学, 微生物病研究所, 准教授 2016: 大阪大学, 免疫学フロンティア研究センター, 特任准教授(常勤) 2010 – 2011: 独立行政法人産業技術総合研究所, 生命情報工学研究センター, 招聘研究員 2009: 九州大学, デジタルメディシンイニシアティブ, 准教授 2009: Kyushu University, デジタルメディシン・イニシアティブ, 准教授
Review Section/Research Field	Principal Investigator Basic Section 45020:Evolutionary biology-related / Evolutionary biology / Bioinformatics/Life informatics Except Principal Investigator Biological Sciences
Keywords	Principal Investigator 巨大アラインメント / ウイルスゲノム / 多重配列アラインメント / タンパク質立体構造 / タンパク質 / 配列アラインメント / 新型シークエンサー / ロングリードシークエンサ / 分子進化 / 正の淘汰 … More / データベース / 文字列の比較 / ゲノム比較 / T細胞受容体 / 行動分析 / ゲノムアラインメント / 相同性検索 / 立体構造 / SARS-CoV-2 / FFT / ロングリードシーケンサー / 塩基配列 / 配列解析 / 計算プログラム / 多重アラインメント / 最尤法 / 最節約法 / 生態生命情報学 / 分子系統樹 / 構造アラインメント / 生体生命情報学 / 配列アライメント / バイオインフォマティクス / 並列計算 / 構造アライメント … More Except Principal Investigator データベース / シグナル伝達系 / 生物多様性 / 分子系統樹 / ゲノム / 立襟鞭毛虫 / 多細胞化 / 分子進化 Less

MAFFT多重配列アラインメントプログラムの機能拡張Principal Investigator
- Principal Investigator
  
  加藤和貴
- Project Period (FY)
  2020 – 2024
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 45020:Evolutionary biology-related
- Research Institution
  Osaka University
Extension of MAFFT multiple sequence alignment program mainly for large dataPrincipal Investigator
- Principal Investigator
  
  Katoh Kazutaka
- Project Period (FY)
  2016 – 2020
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Research Field
  
  Evolutionary biology
- Research Institution
  Osaka University
Extension of the MAFFT algorithm to RNA and protein structural multiple alignmentPrincipal Investigator
- Principal Investigator
  
  KATOH Kazutaka
- Project Period (FY)
  2009 – 2011
- Research Category
  
  Grant-in-Aid for Young Scientists (B)
- Research Field
  
  Bioinformatics/Life informatics
- Research Institution
  National Institute of Advanced Industrial Science and Technology
  Kyushu University
A study on the origin and evolution of multicellular animals
- Principal Investigator
  
  IWABE Naoyuki
- Project Period (FY)
  2005 – 2009
- Research Category
  
  Grant-in-Aid for Scientific Research on Priority Areas
- Review Section
  
  Biological Sciences
- Research Institution
  Kyoto University

All 2023 2022 2021 2020 2019 2018 2017 2016 2011 2010 2009 2008 2007 2005

All Journal Article Presentation Book

[Book] Multiple Sequence Alignment (Methods in Molecular Biology)2021
- Author(s)
  Katoh, Kazutaka (Ed.)
- Total Pages
  321
- Publisher
  Springer
- ISBN
  9781071610350
- Data Source
  KAKENHI-PROJECT-20K06767
[Book] Multiple Sequence Alignment (Methods in Molecular Biology)2021
- Author(s)
  Kazutaka Katoh ed.
- Total Pages
  321
- Publisher
  Springer
- ISBN
  9781071610350
- Data Source
  KAKENHI-PROJECT-16K07464
[Book] Multiple Alignment of DNA Sequences with MAFFT.'Bioinformatics for DNA Sequence Analysis' edited by D. Posada2009
- Author(s)
  Katoh K, Asimenos G, Toh H
- Publisher
  Springer
- Data Source
  KAKENHI-PROJECT-21700326
[Book] Multiple Alignment of DNA Sequences with MAFFT.'Bioinformatics for DNA Sequence Analysis'(Chapter 3, Methods in Molecular Biology, 537)2009
- Author(s)
  Katoh, K., Asimenos, G., Toh, H.
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] An engineered ACE2 decoy neutralizes the SARS-CoV-2 Omicron variant and confers protection against infection in vivo2022
- Author(s)
  Ikemura Nariko、Taminishi Shunta、Inaba Tohru、Arimori Takao、Motooka Daisuke、Katoh Kazutaka、Kirita Yuhei、Higuchi Yusuke、Li Songling、Suzuki Tatsuya、Itoh Yumi、Ozaki Yuki、Nakamura Shota、Matoba Satoaki、Standley Daron M.、Okamoto Toru、Takagi Junichi、Hoshino Atsushi
- Journal Title
  
  Science Translational Medicine
  
  Volume: 14 Issue: 650
- DOI
  10.1126/scitranslmed.abn7737
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K06767, KAKENHI-PROJECT-20H00455
[Journal Article] Amino Acid Specificity of Ancestral Aminoacyl-tRNA Synthetase Prior to the Last Universal Common Ancestor Commonote commonote2022
- Author(s)
  Furukawa Ryutaro、Yokobori Shin-ichi、Sato Riku、Kumagawa Taimu、Nakagawa Mizuho、Katoh Kazutaka、Yamagishi Akihiko
- Journal Title
  
  Journal of Molecular Evolution
  
  Volume: 90 Issue: 1 Pages: 73-94
- DOI
  10.1007/s00239-021-10043-z
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20H02018, KAKENHI-PROJECT-20K06767
[Journal Article] The evolution of structural genomics2022
- Author(s)
  Standley Daron M.、Nakanishi Tokuichiro、Xu Zichang、Haruna Soichiro、Li Songling、Nazlica Sedat Aybars、Katoh Kazutaka
- Journal Title
  
  Biophysical Reviews
  
  Volume: 14 Issue: 6 Pages: 1247-1253
- DOI
  10.1007/s12551-022-01031-8
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K06767
[Journal Article] Deciphering the origin of Aspergillus flavus NRRL21882, the active biocontrol agent of Afla‐Guard(R)2021
- Author(s)
  Chang P.‐K.、Chang T.D.、Katoh K.
- Journal Title
  
  Letters in Applied Microbiology
  
  Volume: 722231 Issue: 5 Pages: 509-516
- DOI
  10.1111/lam.13433
- Peer Reviewed / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K06767
[Journal Article] Emerging SARS-CoV-2 variants follow a historical pattern recorded in outgroups infecting non-human hosts2021
- Author(s)
  Katoh Kazutaka、Standley Daron M.
- Journal Title
  
  Communications Biology
  
  Volume: 4 Issue: 1 Pages: 1134-1134
- DOI
  10.1038/s42003-021-02663-4
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K06767
[Journal Article] Long-read Sequencing Identifies the Pathogenic Nucleotide Repeat Expansion in RFC1 in a Japanese Case of CANVAS2020
- Author(s)
  Haruko Nakamura, Hiroshi Doi, Satomi Mitsuhashi, Satoko Miyatake, Kazutaka Katoh, Martin C Frith, Tetsuya Asano, Yosuke Kudo, Takuya Ikeda, Shun Kubota, Misako Kunii, Yu Kitazawa, Mikiko Tada, Mitsuo Okamoto, Hideto Joki, Hideyuki Takeuchi, Naomichi Matsumoto, Fumiaki Tanaka
- Journal Title
  
  Journal of Human Genetics
  
  Volume: 65 Issue: 5 Pages: 475-480
- DOI
  10.1038/s10038-020-0733-y
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K07977, KAKENHI-PROJECT-19K17014, KAKENHI-PROJECT-17K10080, KAKENHI-PROJECT-20K06767, KAKENHI-PROJECT-20K07907, KAKENHI-PROJECT-18K07503
[Journal Article] A pipeline for complete characterization of complex germline rearrangements from long DNA reads2020
- Author(s)
  Mitsuhashi Satomi、Ohori Sachiko、Katoh Kazutaka、Frith Martin C.、Matsumoto Naomichi
- Journal Title
  
  Genome Medicine
  
  Volume: 12 Issue: 1 Pages: 67-67
- DOI
  10.1186/s13073-020-00762-1
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K07977, KAKENHI-PROJECT-20K06767, KAKENHI-PROJECT-16H06279
[Journal Article] Long-read DNA sequencing fully characterized chromothripsis in a patient with Langer?Giedion syndrome and Cornelia de Lange syndrome-42020
- Author(s)
  Lei Ming、Liang Desheng、Yang Yifeng、Mitsuhashi Satomi、Katoh Kazutaka、Miyake Noriko、Frith Martin C.、Wu Lingqian、Matsumoto Naomichi
- Journal Title
  
  Journal of Human Genetics
  
  Volume: - Issue: 8 Pages: 667-674
- DOI
  10.1038/s10038-020-0754-6
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K07464, KAKENHI-PROJECT-19K07977, KAKENHI-PROJECT-19H03621, KAKENHI-PROJECT-20K06767
[Journal Article] Flexible, Functional, and Familiar: Characteristics of SARS-CoV-2 Spike Protein Evolution2020
- Author(s)
  Saputri Dianita S.、Li Songling、van Eerden Floris J.、Rozewicki John、Xu Zichang、Ismanto Hendra S.、Davila Ana、Teraguchi Shunsuke、Katoh Kazutaka、Standley Daron M.
- Journal Title
  
  Frontiers in Microbiology
  
  Volume: 11 Pages: 2112-2112
- DOI
  10.3389/fmicb.2020.02112
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-20K06767
[Journal Article] lamassemble: Multiple Alignment and Consensus Sequence of Long Reads2020
- Author(s)
  Frith Martin C.、Mitsuhashi Satomi、Katoh Kazutaka
- Journal Title
  
  Methods Mol Biol.
  
  Volume: 2231 Pages: 135-145
- DOI
  10.1007/978-1-0716-1036-7_9
- ISBN
  9781071610350, 9781071610367
- Data Source
  KAKENHI-PROJECT-19K07977, KAKENHI-PROJECT-20K06767, KAKENHI-PROJECT-16K07464
[Journal Article] Analysis of Protein Intermolecular Interactions with MAFFT-DASH2020
- Author(s)
  Rozewicki John、Li Songling、Katoh Kazutaka、Standley Daron M.
- Journal Title
  
  Multiple Sequence Alignment (Methods in Molecular Biology)
  
  Volume: 2232 Pages: 163-177
- DOI
  10.1007/978-1-0716-1036-7_11
- ISBN
  9781071610350, 9781071610367
- Data Source
  KAKENHI-PROJECT-20K06767, KAKENHI-PROJECT-18H02430, KAKENHI-PROJECT-16K07464
[Journal Article] Repertoire Builder: high-throughput structural modeling of B and T cell receptors2019
- Author(s)
  Schritt Dimitri、Li Songling、Rozewicki John、Katoh Kazutaka、Yamashita Kazuo、Volkmuth Wayne、Cavet Guy、Standley Daron M.
- Journal Title
  
  Molecular Systems Design & Engineering
  
  Volume: 4 Issue: 4 Pages: 761-768
- DOI
  10.1039/c9me00020h
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K07464, KAKENHI-PROJECT-18H02430
[Journal Article] MAFFT-DASH: integrated protein sequence and structural alignment2019
- Author(s)
  Rozewicki John、Li Songling、Amada Karlou Mar、Standley Daron M、Katoh Kazutaka
- Journal Title
  
  Nucleic Acids Research
  
  Volume: 47
- DOI
  10.1093/nar/gkz342
- Peer Reviewed / Open Access / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-16K07464, KAKENHI-PROJECT-18H02430
[Journal Article] Structural Modeling of Lymphocyte Receptors and Their Antigens2019
- Author(s)
  Li Songling、Wilamowski Jan、Teraguchi Shunsuke、van Eerden Floris J.、Rozewicki John、Davila Ana、Xu Zichang、Katoh Kazutaka、Standley Daron M.
- Journal Title
  
  Methods in Molecular Biology
  
  Volume: 2048 Pages: 207-229
- DOI
  10.1007/978-1-4939-9728-2_17
- ISBN
  9781493997275, 9781493997282
- Data Source
  KAKENHI-PROJECT-16K07464
[Journal Article] Parallelization of MAFFT for large-scale multiple sequence alignments2018
- Author(s)
  Nakamura Tsukasa、Yamada Kazunori D、Tomii Kentaro、Katoh Kazutaka
- Journal Title
  
  Bioinformatics
  
  Volume: 印刷中 Issue: 14 Pages: 2490-2492
- DOI
  10.1093/bioinformatics/bty121
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K07464, KAKENHI-PROJECT-17J06457
[Journal Article] MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization2017
- Author(s)
  Katoh Kazutaka、Rozewicki John、Yamada Kazunori D.
- Journal Title
  
  Briefings in Bioinformatics
  
  Volume: 印刷中 Issue: 4 Pages: 1160-1166
- DOI
  10.1093/bib/bbx108
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K07464
[Journal Article] Modeling Biocatalysts2017
- Author(s)
  Schritt Dimitri、Katoh Kazutaka、Li Songling、Standley Daron M.
- Journal Title
  
  Future Directions in Biocatalysis (Second Edition), edited by T. Matsuda
  
  Volume: - Pages: 385-398
- DOI
  10.1016/b978-0-444-63743-7.00019-6
- ISBN
  9780444637437
- Data Source
  KAKENHI-PROJECT-16K07464
[Journal Article] A simple method to control over-alignment in the MAFFT multiple sequence alignment program2016
- Author(s)
  Katoh K, Standley DM
- Journal Title
  
  Bioinformatics
  
  Volume: 32 Issue: 13 Pages: 1933-1942
- DOI
  10.1093/bioinformatics/btw108
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-16K07464
[Journal Article] Application of the MAFFT sequence alignment program to large data―reexamination of the usefulness of chained guide trees2016
- Author(s)
  Yamada KD, Tomii K, Katoh K
- Journal Title
  
  Bioinformatics
  
  Volume: 32 Issue: 21 Pages: 3246-3251
- DOI
  10.1093/bioinformatics/btw412
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-16K07464
[Journal Article] Parallelization of the MAFFT multiple sequence alignment program2010
- Author(s)
  Katoh K, Toh H
- Journal Title
  
  Bioinformatics
  
  Volume: 26 Issue: 15 Pages: 1899-1900
- DOI
  10.1093/bioinformatics/btq224
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-21700326
[Journal Article] Multiple Alignment of DNA Sequences with MAFFT2009
- Author(s)
  Kazutaka Katohl, George Asimenos2, Hiroyuki Toh
- Journal Title
  
  Methods in Molecular Biology 537
  
  Pages: 39-64
- Data Source
  KAKENHI-PROJECT-21700326
[Journal Article] Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework.2008
- Author(s)
  Katoh, K., Toh, H.
- Journal Title
  
  BMC Bioinformatics 9,212
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] Recent developments in the MAFFT multiple sequence alignment program2008
- Author(s)
  Katoh, K. and Toh, H.
- Journal Title
  
  Briefings in Bioinformatics 9
  
  Pages: 286-298
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] Recent developments in the MAFFT multiple sequence alignment program.2008
- Author(s)
  Katoh, K., Toh, H.
- Journal Title
  
  Briefings in Bioinformatics 9(4)
  
  Pages: 286-298
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] Improved accuracy of multiple ncRNA alignment by-incorporating structural information into a MAFFT-based framework2008
- Author(s)
  Katoh, K. and Toh, H
- Journal Title
  
  BMC Bioinformatics 9
  
  Pages: 212-212
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] PartTree : an algorithm to build an approximate tree from a large number of unaligned sequences.2007
- Author(s)
  Katoh K., et al.
- Journal Title
  
  Bioinformatics 23 (3)
  
  Pages: 372-374
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] PartTree: an algorithm to build an approximate tree from a large number of unaligned sequences.2007
- Author(s)
  Katoh, K., Toh, H.
- Journal Title
  
  Bioinformatics 23
  
  Pages: 372-374
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] Improvement in the accuracy of multiple sequence alignment program MAFFT.2005
- Author(s)
  Katoh, K., Kuma, K., Miyata, T., Toh, H.
- Journal Title
  
  Genome Inform. Ser. Workshop Genome Inform. 16(1)
  
  Pages: 22-33
- NAID
  130003997390
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] Improvement in the accuracy of multiple sequence alignment program MAFFT.2005
- Author(s)
  Katoh K. et al.
- Journal Title
  
  Genome Imform.Ser.Workshop Genome Inform. 16(1)
  
  Pages: 22-33
- NAID
  130003997390
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] MAFFT version 5 : improvement in accuracy of multiple sequence alignment.2005
- Author(s)
  Katoh K. et al.
- Journal Title
  
  Nucleic Acids Res. 33(2)
  
  Pages: 511-518
- Data Source
  KAKENHI-PROJECT-17018019
[Journal Article] MAFFT version 5: improvement in accuracy of multiple sequence alignment.2005
- Author(s)
  Katoh, K., Kuma, K., Toh, H., Miyata, T.
- Journal Title
  
  Nucleic Acids Res. 33(2)
  
  Pages: 511-518
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-17018019
[Presentation] Annotation of VDJ genes in TCR loci on eutherian genome2023
- Author(s)
  加藤和貴, Zhou Hao, Daron M Standley
- Organizer
  日本進化学会第２５回年会
- Invited
- Data Source
  KAKENHI-PROJECT-20K06767
[Presentation] Multiple sequence alignments for predicting antigen-antibody interactions2022
- Author(s)
  Kazutaka Katoh
- Organizer
  Simons Institute Workshop "Computational Challenges in Very Large-Scale 'Omics'"
- Invited / Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-20K06767
[Presentation] Off-plan use of technology2022
- Author(s)
  Kazutaka Katoh
- Organizer
  日本進化学会第 24 回年会
- Invited
- Data Source
  KAKENHI-PROJECT-20K06767
[Presentation] 抗原抗体複合体予測における多重配列アラインメントの利用について2022
- Author(s)
  加藤和貴
- Organizer
  遺伝研研究会「生命科学を支える分子系統学」
- Invited
- Data Source
  KAKENHI-PROJECT-20K06767
[Presentation] 多重配列アラインメントプログラムMAFFTの新機能について2019
- Author(s)
  加藤和貴
- Organizer
  日本進化学会第21回大会
- Invited
- Data Source
  KAKENHI-PROJECT-16K07464
[Presentation] 多重配列アラインメントの並列計算2018
- Author(s)
  加藤和貴
- Organizer
  配列解析シンポジウム ~36 years since Smith-Waterman-Gotoh~
- Invited
- Data Source
  KAKENHI-PROJECT-16K07464
[Presentation] アラインメント2017
- Author(s)
  加藤和貴
- Organizer
  木村資生記念進化学セミナー
- Invited
- Data Source
  KAKENHI-PROJECT-16K07464
[Presentation] Effect of adding homologs in phylogenetic analysis2011
- Author(s)
  Katoh K, Ledergerber C, Dessimoz, C, Gil, M
- Organizer
  ISMB/ECCB2011
- Place of Presentation
  Austria Center Vienna, Vienna, Austria
- Year and Date
  2011-07-18
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] Effect of adding homologs in phylogenetic analysis. GCOEバイオインフォマティクス公開セミナー2011
- Author(s)
  Katoh K, Ledergerber C, Dessimoz C, Gil M
- Organizer
  日本バイオインフォマティクス学会北海道地域部会セミナー
- Place of Presentation
  北海道大学,札幌
- Year and Date
  2011-08-04
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] Effect of adding homologs in phylogenetic analysis2011
- Author(s)
  Kazutaka Katoh
- Organizer
  SMBE2011
- Place of Presentation
  Kyoto University, Kyoto, Japan(招待講演)
- Year and Date
  2011-07-27
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] Effect of adding homologs in phylogenetic analysis2011
- Author(s)
  Katoh K, Ledergerber C, Dessimoz, C, Gil, M
- Organizer
  SMBE2011
- Place of Presentation
  Kyoto University, Kyoto, Japan
- Year and Date
  2011-07-27
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] Effect of adding homologs in phylogenetic analysis2011
- Author(s)
  Katoh K
- Organizer
  Zurich Colloquium for Computational Molecular Evolution
- Place of Presentation
  ETH Zurich, Zurich, Switzerland
- Year and Date
  2011-07-14
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] Effect of adding homologs in phylogenetic analysis2011
- Author(s)
  Kazutaka Katoh
- Organizer
  Zurich Colloquium for Computational Molecular Evolution
- Place of Presentation
  ETH Zurich, Zurich, Switzerland(招待講演)
- Year and Date
  2011-07-14
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] TWO EXTENSIONS OF MAFFT : PROTEIN STRUCTURE-SEQUENCE ALIGNMENT AND LARGE-SCALE SEQUENCE ALIGNMENT2010
- Author(s)
  Katoh K
- Organizer
  CBRC2010
- Place of Presentation
  Tokyo
- Year and Date
  2010-07-27
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] Two extensions of MAFFT : protein structure-sequence alignment and large-scale sequence alignment2010
- Author(s)
  Katoh K, Standley D M, Dinh H, Nakamura H, Toh H
- Organizer
  CBRC2010
- Place of Presentation
  AIST Tokyo Waterfront Center, Tokyo, Japan
- Year and Date
  2010-07-28
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] 立襟鞭毛虫Monosiga ovataゲノム計画:II. 動物初期進化における遺伝子の多様化2009
- Author(s)
  岩部直之、隈啓一、加藤和貴、藤博幸、廣瀬希、佐々木剛、村田友輔、菅裕、宮田隆、鈴木穣、笠原雅弘、新井理、大石加寿子、鹿児島浩、豊田敦、黒木陽子、菅野純夫、森下真一、小原雄治、藤山秋佐夫
- Organizer
  日本遺伝学会第81回大会
- Place of Presentation
  信州大学理学部(松本市)(一般講演(口頭発表:3B-13))
- Year and Date
  2009-09-18
- Data Source
  KAKENHI-PROJECT-17018019
[Presentation] MAFFTash-a structure-sequence multiple alignment program for proteins2009
- Author(s)
  加藤和貴, Daron M. Standley,中村春木,藤博幸
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜,横浜
- Year and Date
  2009-12-12
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] 立襟鞭毛虫Monosiga ovataゲノム計画:I. ゲノム概観2009
- Author(s)
  隈啓一、岩部直之、加藤和貴、藤博幸、廣瀬希、佐々木剛、菅裕、宮田隆、鈴木穣、笠原雅弘、新井理、大石加寿子、鹿児島浩、豊田敦、黒木陽子、菅野純夫、森下真一、小原雄治、藤山秋佐夫
- Organizer
  日本遺伝学会第81回大会
- Place of Presentation
  信州大学理学部(松本市)(一般講演(口頭発表:3B-12))
- Year and Date
  2009-09-18
- Data Source
  KAKENHI-PROJECT-17018019
[Presentation] MAFFTash-a structure-sequence multiple alignment program for proteins2009
- Author(s)
  加藤和貴, Daron M., Standley, 中村春木, 藤博幸
- Organizer
  第32回日本分子生物学会年会
- Place of Presentation
  パシフィコ横浜, 横浜
- Year and Date
  2009-12-12
- Data Source
  KAKENHI-PROJECT-21700326
[Presentation] 立襟鞭毛虫Monosiga ovataゲノムプロジェクト:I. ゲノムの概観2008
- Author(s)
  隈啓一、岩部直之、加藤和貴、藤博幸、廣瀬希、佐々木剛、菅裕、宮田隆、鈴木穣、笠原雅弘、新井理、大石加寿子、鹿児島浩、豊田敦、黒木陽子、菅野純夫、森下真一、小原雄治、藤山秋佐夫
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド(神戸市)(一般講演(ポスター発表:1P-0692))
- Year and Date
  2008-12-09
- Data Source
  KAKENHI-PROJECT-17018019
[Presentation] Genome sequencing project of a unicellular choanoflagellate, Monosiga ovata: Extensive molecular phylogenetic analysis with choanoflagellate genes reveals divergence patterns of gene family members in the early evolution of metazoans.2008
- Author(s)
  Iwabe, N., Kuma, K., Katoh, K., Suga, H., Hirose, N., Toh, H., Miyata, T., Suzuki, Y., Kasahara, M., Narita, T., Shin-i, T., Kuroki, Y., Toyoda, A., Sugano, S., Morishita, S., Kohara, Y., Fujiyama, A.
- Organizer
  XX International Congress of Genetics
- Place of Presentation
  Berlin, Germany(一般講演(ポスター発表:P121/18/B))
- Data Source
  KAKENHI-PROJECT-17018019
[Presentation] 立襟鞭毛虫Monosiga ovataゲノムプロジェクト:II. 動物初期進化における遺伝子の多様化2008
- Author(s)
  岩部直之、隈啓一、加藤和貴、藤博幸、廣瀬希、佐々木剛、菅裕、宮田隆、鈴木穣、笠原雅弘、新井理、大石加寿子、鹿児島浩、豊田敦、黒木陽子、菅野純夫、森下真一、小原雄治、藤山秋佐夫
- Organizer
  第31回日本分子生物学会年会・第81回日本生化学会大会合同大会
- Place of Presentation
  神戸ポートアイランド(神戸市)(一般講演(ポスター発表:1P-0693))
- Year and Date
  2008-12-09
- Data Source
  KAKENHI-PROJECT-17018019
[Presentation] 立襟鞭毛虫遺伝子から探る動物初期進化における遺伝子多様化:(2)細胞接着、アポトーシス、転写調節関連遺伝子の進化2007
- Author(s)
  隈啓一、岩部直之、廣瀬希、菅裕、加藤和貴、藤博幸、宮田隆
- Organizer
  第30回日本分子生物学会年会・第80回日本生化学会大会合同大会
- Place of Presentation
  パシフィコ横浜(横浜市)(一般講演(ポスター発表:4P-1240))
- Year and Date
  2007-12-14
- Data Source
  KAKENHI-PROJECT-17018019
[Presentation] 立襟鞭毛虫遺伝子から探る動物初期進化における遺伝子多様化:(1)シグナル伝達系関連遺伝子の進化2007
- Author(s)
  岩部直之、隈啓一、廣瀬希、菅裕、加藤和貴、藤博幸、宮田隆
- Organizer
  第30回日本分子生物学会年会・第80回日本生化学会大会合同大会
- Place of Presentation
  パシフィコ横浜(横浜市)(一般講演(ポスター発表:4P-1239))
- Year and Date
  2007-12-14
- Data Source
  KAKENHI-PROJECT-17018019
[Presentation] 細胞外カドヘリンドメインを持つタンパク質の進化2007
- Author(s)
  隈啓一、加藤和貴、藤博幸、宮田隆、岩部直之
- Organizer
  日本進化学会第9回京都大会
- Place of Presentation
  京都大学理学部(京都市)(一般講演(口頭発表:A11))
- Year and Date
  2007-08-31
- Data Source
  KAKENHI-PROJECT-17018019
[Presentation] 立襟鞭毛虫・ゲノムと多細胞体制の進化, シンポジウムS4「動物進化のゲノム基盤」2007
- Author(s)
  岩部直之、隈啓一、加藤和貴、菅裕、廣瀬希、藤博幸、岡田雅人、笠原雅弘、森下真一、小原雄治、藤山秋佐夫、宮田隆
- Organizer
  日本進化学会第9回京都大会
- Place of Presentation
  京都大学理学部(京都市)(口頭発表:S4-1)
- Year and Date
  2007-09-02
- Data Source
  KAKENHI-PROJECT-17018019

1. IWABE Naoyuki (80263060)

# of Collaborated Projects: 1 results

# of Collaborated Products: 9 results
2. TOH Hiroyuki (70192656)

# of Collaborated Projects: 1 results

# of Collaborated Products: 20 results
3. KUMA Kei-ichi (10221938)

# of Collaborated Projects: 1 results

# of Collaborated Products: 11 results
4. OKADA Masato (10177058)

# of Collaborated Projects: 1 results

# of Collaborated Products: 1 results
5. MIYATA Takashi (20022692)

# of Collaborated Projects: 1 results

# of Collaborated Products: 11 results
6. 山田和範 (20756217)

# of Collaborated Projects: 1 results

# of Collaborated Products: 3 results
7. 富井健太郎 (40357570)

# of Collaborated Projects: 1 results

# of Collaborated Products: 2 results
8. FRITH Martin

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results
9. 三橋里美

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results
10. 横堀伸一

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Katoh Kazutaka 加藤 和貴

KATOH Kazutaka 加藤 和貴

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MAFFT多重配列アラインメントプログラムの機能拡張Principal Investigator

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Extension of MAFFT multiple sequence alignment program mainly for large dataPrincipal Investigator

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Extension of the MAFFT algorithm to RNA and protein structural multiple alignmentPrincipal Investigator

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A study on the origin and evolution of multicellular animals

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[Book] Multiple Sequence Alignment (Methods in Molecular Biology)2021

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[Book] Multiple Sequence Alignment (Methods in Molecular Biology)2021

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[Book] Multiple Alignment of DNA Sequences with MAFFT.'Bioinformatics for DNA Sequence Analysis' edited by D. Posada2009

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[Book] Multiple Alignment of DNA Sequences with MAFFT.'Bioinformatics for DNA Sequence Analysis'(Chapter 3, Methods in Molecular Biology, 537)2009

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[Journal Article] An engineered ACE2 decoy neutralizes the SARS-CoV-2 Omicron variant and confers protection against infection in vivo2022

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[Journal Article] Amino Acid Specificity of Ancestral Aminoacyl-tRNA Synthetase Prior to the Last Universal Common Ancestor Commonote commonote2022

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[Journal Article] The evolution of structural genomics2022

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[Journal Article] Deciphering the origin of Aspergillus flavus NRRL21882, the active biocontrol agent of Afla‐Guard(R)2021

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[Journal Article] Emerging SARS-CoV-2 variants follow a historical pattern recorded in outgroups infecting non-human hosts2021

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[Journal Article] Long-read Sequencing Identifies the Pathogenic Nucleotide Repeat Expansion in RFC1 in a Japanese Case of CANVAS2020

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[Journal Article] A pipeline for complete characterization of complex germline rearrangements from long DNA reads2020

Author(s)

Katoh Kazutaka 加藤和貴

KATOH Kazutaka 加藤和貴