SEKINE Ryoji 関根亮二

Researcher Number	70730232
Affiliation (based on the past Project Information) *help	2017: 独立行政法人理化学研究所, 発生・再生科学総合研究センター・再構成生物学研究ユニット, 研究員 2015: 国立研究開発法人理化学研究所, 生命システム研究センター, 基礎科学特別研究員 2015: 理化学研究所, 生命システム研究センター, 研究員 2014: 独立行政法人理化学研究所, 生命システム研究センター, 研究員
Review Section/Research Field	Principal Investigator Molecular biology Except Principal Investigator Intelligent informatics / Complex systems
Keywords	Principal Investigator 合成生物学 / Nodal / 発生生物学 / 合成製生物学 Except Principal Investigator 合成生物学 / 結合振動子 / 細胞間通信 / 多細胞生物 / メタゲノム / セルオートマトン … More / チューリングパターン / 遺伝子回路インピーダンス / 遺伝子回路カスケード / 光制御生態系 / メタゲノム解析 / 微生物マット / 微生物共生系 / 多細胞計算 / 非線形システム / 代謝経路 / 遺伝子回路 / 並列シュミレーション / 並列シミュレーション / 複雑ネットワーク / 確率過程 / 非線形動力学 / 人工遺伝子回路 Less

Multicellular analog/digital computing with cellular neighbouhood communication validated by Synthetic Biology
- Principal Investigator
  
  Yamamura Masayuki
- Project Period (FY)
  2015 – 2017
- Research Category
  
  Grant-in-Aid for Challenging Exploratory Research
- Research Field
  
  Intelligent informatics
- Research Institution
  Tokyo Institute of Technology
Investigation of a mechanism to form an asymmetric gene expression pattern by a reconstitutive approachPrincipal Investigator
- Principal Investigator
  
  Sekine Ryoji
- Project Period (FY)
  2014 – 2015
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Research Field
  
  Molecular biology
- Research Institution
  Institute of Physical and Chemical Research
Design and Analysis for Dynamical Genetic Circuits based on various Mathematical Models
- Principal Investigator
  
  YAMAMURA Masayuki
- Project Period (FY)
  2011 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Complex systems
- Research Institution
  Tokyo Institute of Technology

All 2016 2015 2013 2012 2011

All Journal Article Presentation

[Journal Article] High-frequency noise attenuation of a two-component system responding to short-pulse input2016
- Author(s)
  Akifumi Nishida, Ryoji Sekine, Daisuke Kiga, and Masayuki Yamamura
- Journal Title
  
  Proc. of The 7th international conference on Computational Systems-Biology and Bioinformatics (CSBio2016)
  
  Volume: 1 Pages: 28-35
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-15K12092
[Journal Article] Design and Control of Synthetic Biological Systems2013
- Author(s)
  Ryoji Sekine
- Journal Title
  
  Natural Computing and Beyond
  
  Volume: 6 Pages: 104-114
- DOI
  10.1007/978-4-431-54394-7_9
- ISBN
  9784431543930, 9784431543947
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-23119008, KAKENHI-PROJECT-23300084, KAKENHI-PROJECT-23650069, KAKENHI-PROJECT-25540098
[Journal Article] Design strategy for an initial state-independent diversity generator2012
- Author(s)
  Ryoji Sekine
- Journal Title
  
  Chem-Bio Informatics Journal
  
  Volume: vol. 12 Pages: 39-49
- NAID
  130004138125
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-23119008
[Journal Article] Tunable synthetic phenotypic diversification on Waddington's landscape through autonomous signaling2011
- Author(s)
  Sekine, R., Yamamura, M., Ayukawa, S., Ishimatsu, K., Akama, S., Takinoue, M., Hagiya, M., Kiga, D.
- Journal Title
  
  Proc.Natl.Acad.Sci.U.S.A.
  
  Volume: 108 Issue: 44 Pages: 17969-17973
- DOI
  10.1073/pnas.1105901108
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-09J09649, KAKENHI-PLANNED-23119005, KAKENHI-PROJECT-23300084, KAKENHI-PROJECT-23650066, KAKENHI-PROJECT-23650069, KAKENHI-PROJECT-23680031, KAKENHI-PLANNED-23119008
[Journal Article] Tunable synthetic phenotypic diversification on Waddington's landscape through autonomous signaling2011
- Author(s)
  Ryoji Sekine, Masayuki Yamamura, 5名略, Daisuke Kiga
- Journal Title
  
  Proceedings of the National Academy of Sciences
  
  Volume: 108 Pages: 17969-17973
- Peer Reviewed
- Data Source
  KAKENHI-PLANNED-23119008
[Presentation] Synthetic Turing pattern formation using the Nodal-Lefty signaling system in cultured cells2015
- Author(s)
  Ryoji Sekine, Mitsuhiro Matsuda, Miki Ebisuya
- Organizer
  26th CDB meeting
- Place of Presentation
  理化学研究所多細胞システム形成研究センター（兵庫県神戸市）
- Year and Date
  2015-09-08
- Data Source
  KAKENHI-PROJECT-26891027
[Presentation] Synthetic Turing pattern formation using the Nodal-Lefty signaling system in cultured cells2015
- Author(s)
  Ryoji Sekine, Mitsuhiro Matsuda, Miki Ebisuya
- Organizer
  細胞を創る研究会8.0
- Place of Presentation
  大阪大学（大阪府吹田市）
- Year and Date
  2015-11-12
- Data Source
  KAKENHI-PROJECT-26891027

1. YAMAMURA Masayuki (00220442)

# of Collaborated Projects: 2 results

# of Collaborated Products: 2 results
2. SUZUKI Yasuhiro (50292983)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
3. ITO Hiroshi (20512627)

# of Collaborated Projects: 2 results

# of Collaborated Products: 0 results
4. KONAGAYA Akihiko (00301200)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
5. KOBAYASHI Tetsuya (90513359)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
6. MOCHIZUKI Atsushi (10304726)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
7. TAKAYASU Misako (20296776)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
8. ONO Isao (20078166)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results
9. NOMURA Shin-ichiro (50372446)

# of Collaborated Projects: 1 results

# of Collaborated Products: 0 results

SEKINE Ryoji 関根 亮二

Research Projects

Research Products

Co-Researchers

Multicellular analog/digital computing with cellular neighbouhood communication validated by Synthetic Biology

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Investigation of a mechanism to form an asymmetric gene expression pattern by a reconstitutive approachPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

Design and Analysis for Dynamical Genetic Circuits based on various Mathematical Models

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

[Journal Article] High-frequency noise attenuation of a two-component system responding to short-pulse input2016

Author(s)

Journal Title

Data Source

[Journal Article] Design and Control of Synthetic Biological Systems2013

Author(s)

Journal Title

DOI

ISBN

Data Source

[Journal Article] Design strategy for an initial state-independent diversity generator2012

Author(s)

Journal Title

NAID

Data Source

[Journal Article] Tunable synthetic phenotypic diversification on Waddington's landscape through autonomous signaling2011

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Tunable synthetic phenotypic diversification on Waddington's landscape through autonomous signaling2011

Author(s)

Journal Title

Data Source

[Presentation] Synthetic Turing pattern formation using the Nodal-Lefty signaling system in cultured cells2015

Author(s)

Organizer

Place of Presentation

Year and Date

Data Source

[Presentation] Synthetic Turing pattern formation using the Nodal-Lefty signaling system in cultured cells2015

Author(s)

Organizer

Place of Presentation

Year and Date

Data Source

SEKINE Ryoji 関根亮二