Yamanaka Soichiro 山中総一郎

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YAMANAKA SOICHIRO 山中総一郎

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Researcher Number	80711845
Other IDs
Affiliation (Current)	2023: 東京大学, 大学院理学系研究科(理学部), 准教授
Affiliation (based on the past Project Information) *help	2019 – 2021: 東京大学, 大学院理学系研究科(理学部), 准教授 2017: 慶應義塾大学, 医学部(信濃町), 講師 2016: 慶應義塾大学, 医学部(信濃町), 助教 2013 – 2016: 慶應義塾大学, 医学部, 助教
Review Section/Research Field	Principal Investigator Biological Sciences / Molecular biology / Genome biology / Basic Section 43050:Genome biology-related
Keywords	Principal Investigator トランスポゾン / 生殖細胞 / クロマチン / piRNA / CRISPR/Cas9 / 遺伝子発現 / ヘテロクロマチン / ATAC-seq / ゲノム / エピジェネティクス … More / ゴノサイト / 偽遺伝子 / ゲノミクス / エピゲノム / gonad / PIWI / ChIP / 小分子RNA / リピート配列 / 遺伝子発現制御 / ゲノム編集技術 / 反復配列 / 発現制御 / セントロメア / DNAメチル化 / 核サイズ / FISH Less

Analysis of chromatin dynamics in gonocytePrincipal Investigator
- Principal Investigator
  
  Yamanaka Soichiro
- Project Period (FY)
  2019 – 2021
- Research Category
  
  Grant-in-Aid for Scientific Research (C)
- Review Section
  
  Basic Section 43050:Genome biology-related
- Research Institution
  The University of Tokyo
ゲノム反復配列の核内テーミングPrincipal Investigator
- Principal Investigator
  
  山中総一郎
- Project Period (FY)
  2016 – 2017
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Keio University
GS細胞を用いた雄性エピゲノム形成の分子基盤の解明と新規解析技術の開発Principal Investigator
- Principal Investigator
  
  山中総一郎
- Project Period (FY)
  2014 – 2015
- Research Category
  
  Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
- Review Section
  
  Biological Sciences
- Research Institution
  Keio University
Biochemical analysis of small RNA-induced epigenetic changesPrincipal Investigator
- Principal Investigator
  
  YAMANAKA SOICHIRO
- Project Period (FY)
  2014 – 2016
- Research Category
  
  Grant-in-Aid for Young Scientists (A)
- Research Field
  
  Genome biology
- Research Institution
  Keio University
霊長類生殖細胞におけるトランスポゾン抑制機構の解析Principal Investigator
- Principal Investigator
  
  山中総一郎
- Project Period (FY)
  2013 – 2014
- Research Category
  
  Grant-in-Aid for Research Activity Start-up
- Research Field
  
  Molecular biology
- Research Institution
  Keio University

All 2021 2020 2019 2016 2015 2014 2013

All Journal Article Presentation Book

[Book] 生化学2021
- Author(s)
  山中総一郎
- Total Pages
  3
- Publisher
  日本生化学会
- Data Source
  KAKENHI-PROJECT-19K06616
[Book] 実験医学2015
- Author(s)
  山中総一郎
- Total Pages
  2
- Publisher
  羊土社
- Data Source
  KAKENHI-PROJECT-26710011
[Book] 細胞工学2015
- Author(s)
  山中総一郎、塩見春彦
- Total Pages
  6
- Publisher
  学研メディカル秀潤社
- Data Source
  KAKENHI-PUBLICLY-26112513
[Book] 細胞工学2015
- Author(s)
  山中総一郎、塩見春彦
- Total Pages
  6
- Publisher
  学研メディカル秀潤社
- Data Source
  KAKENHI-PROJECT-26710011
[Book] 実験医学2015
- Author(s)
  山中総一郎
- Total Pages
  2
- Publisher
  羊土社
- Data Source
  KAKENHI-PUBLICLY-26112513
[Journal Article] TRIM28 Expression on Dendritic Cells Prevents Excessive T Cell Priming by Silencing Endogenous Retrovirus2021
- Author(s)
  Chikuma S, Yamanaka S, Nakagawa S, Ueda MT, Hayabuchi H, Tokifuji Y, Kanayama M, Okamura T, Arase H, Yoshimura A
- Journal Title
  
  The Journal of Immunology
  
  Volume: 206 Pages: 1528-1539
- DOI
  10.4049/jimmunol.2001003
- Description
  in press
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06616, KAKENHI-PUBLICLY-19H04816, KAKENHI-PUBLICLY-19H05431, KAKENHI-PROJECT-17H06175, KAKENHI-PROJECT-20K20384, KAKENHI-PROJECT-16H06276, KAKENHI-PROJECT-19K07488, KAKENHI-PUBLICLY-21H00439, KAKENHI-PROJECT-21H05044
[Journal Article] Broad heterochromatic domains open in gonocyte development prior to de novo DNA methylation.2019
- Author(s)
  Yamanaka Soichiro、Nishihara Hidenori、Toh Hidehiro、Eijy Nagai Luis Augusto、Hashimoto Kosuke、Park Sung-Joon、Shibuya Aoi、Suzuki Ana Maria、Tanaka Yujiro、Nakai Kenta、Carninci Piero、Sasaki Hiroyuki、Siomi Haruhiko
- Journal Title
  
  Developmental Cell
  
  Volume: 51 Pages: 21-34
- DOI
  10.1016/j.devcel.2019.07.023
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PROJECT-19K06616, KAKENHI-PUBLICLY-18H04710, KAKENHI-PLANNED-19H05753
[Journal Article] Misprocessed tRNA response targets piRNA clusters2015
- Author(s)
  Soichiro Yamanaka, Haruhiko Siomi
- Journal Title
  
  EMBO J
  
  Volume: 34 Pages: 2988-2989
- DOI
  10.15252/embj.201593322
- Peer Reviewed / Open Access
- Data Source
  KAKENHI-PUBLICLY-26112513, KAKENHI-PROJECT-25221003, KAKENHI-PROJECT-26710011
[Journal Article] piRNA clusters and open chromatin structure2014
- Author(s)
  Yamanaka, S., Siomi, MC. and Siomi, H.
- Journal Title
  
  Mobile DNA.
  
  Volume: 5 Pages: 1-12
- DOI
  10.1186/1759-8753-5-22
- Peer Reviewed / Acknowledgement Compliant / Open Access
- Data Source
  KAKENHI-PROJECT-25221003, KAKENHI-PROJECT-25221101, KAKENHI-PUBLICLY-26112513, KAKENHI-PROJECT-26710011
[Journal Article] Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance2013
- Author(s)
  Lee NN, Chalamcharla VR, Reyes-Turcu F, Mehta S, Zofall M, Balachandran V, Dhakshnamoorthy J, Taneja N, Yamanaka S, Zhou M, Grewal SI.
- Journal Title
  
  Cell
  
  Volume: 155 Pages: 1061-1074
- DOI
  10.1016/j.cell.2013.10.027
- Peer Reviewed
- Data Source
  KAKENHI-PROJECT-25891022
[Presentation] ゴノサイトにおける一過的なトランスポゾン脱抑制のクロマチン基盤の解析2021
- Author(s)
  名取達哉、関真秀、鳴海良平、足立淳、鈴木穣、塩見美喜子、山中総一郎
- Organizer
  第93回日本遺伝学会年会
- Invited
- Data Source
  KAKENHI-PROJECT-19K06616
[Presentation] ゴノサイト一過的なクロマチン弛緩を駆動する分子機構の解明2021
- Author(s)
  名取達哉、関真秀、鈴木穣、塩見美喜子、山中総一郎
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-19K06616
[Presentation] ゴノサイトにおいてDNAメチル化関連因子Morc1タンパク質が担う核内動態2021
- Author(s)
  中山弦、塩見美喜子、山中総一郎
- Organizer
  第44回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-19K06616
[Presentation] シングルセルRNA-seq法を用いたゴノサイトにおけるクロマチン動態の解析2020
- Author(s)
  名取達哉、関真秀、鈴木穣、塩見美喜子、山中総一郎
- Organizer
  第43回日本分子生物学会年会
- Data Source
  KAKENHI-PROJECT-19K06616
[Presentation] マウス胎仔期生殖細胞におけるクロマチンリプログラミング2019
- Author(s)
  山中総一郎
- Organizer
  第21回日本RNA学会年会
- Data Source
  KAKENHI-PROJECT-19K06616
[Presentation] シングルセルRNA-seq法を用いたゴノサイトにおけるクロマチン動態の解析2019
- Author(s)
  山中総一郎
- Organizer
  第36回染色体ワークショップ
- Data Source
  KAKENHI-PROJECT-19K06616
[Presentation] Developing a novel method to identify chromatin components at transposons using CRISPR/Cas9 system2016
- Author(s)
  Soichiro Yamanaka, Ten Li, Takeshi Kawamura, Tatsuhiko Kodama, Haruhiko Siomi
- Organizer
  国際RNA学会
- Place of Presentation
  京都国際会議場
- Year and Date
  2016-06-28
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-16H01411
[Presentation] Developing a novel method to identify chromatin components at transposons using CRISPR/Cas9 system2016
- Author(s)
  Soichiro Yamanaka, Ten Li, Takeshi Kawamura, Tatsuhiko Kodama, Haruhiko Siomi
- Organizer
  RNA2016 Meeting
- Place of Presentation
  国立京都国際会館(京都府京都市)
- Year and Date
  2016-06-28
- Int'l Joint Research
- Data Source
  KAKENHI-PUBLICLY-26112513
[Presentation] Developing a novel method to identify chromatin components at transposons using CRISPR/Cas9 system2016
- Author(s)
  Soichiro Yamanaka, Ten Li, Takeshi Kawamura, Tatsuhiko Kodama, Haruhiko Siomi
- Organizer
  国際RNA学会
- Place of Presentation
  京都、国際会議場
- Year and Date
  2016-06-28
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26710011
[Presentation] Developing a novel method to identify chromatin components at transposons using CRISPR/Cas9 system2016
- Author(s)
  Soichiro Yamanaka, Ten Li, Takeshi Kawamura, Tatsuhiko Kodama, Haruhiko Siomi
- Organizer
  RNA2016 Meeting
- Place of Presentation
  国立京都国際会館(京都府京都市)
- Year and Date
  2016-06-28
- Int'l Joint Research
- Data Source
  KAKENHI-PROJECT-26710011

1. 塩見春彦

# of Collaborated Projects: 0 results

# of Collaborated Products: 3 results
2. 塩見美喜子

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
3. 朴聖俊

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
4. 竹馬俊介

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results
5. 吉村昭彦

# of Collaborated Projects: 0 results

# of Collaborated Products: 1 results

Yamanaka Soichiro 山中 総一郎

YAMANAKA SOICHIRO 山中 総一郎

Research Projects

Research Products

Co-Researchers

Analysis of chromatin dynamics in gonocytePrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

ゲノム反復配列の核内テーミングPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

GS細胞を用いた雄性エピゲノム形成の分子基盤の解明と新規解析技術の開発Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Review Section

Research Institution

Biochemical analysis of small RNA-induced epigenetic changesPrincipal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

霊長類生殖細胞におけるトランスポゾン抑制機構の解析Principal Investigator

Principal Investigator

Project Period (FY)

Research Category

Research Field

Research Institution

[Book] 生化学2021

Author(s)

Total Pages

Publisher

Data Source

[Book] 実験医学2015

Author(s)

Total Pages

Publisher

Data Source

[Book] 細胞工学2015

Author(s)

Total Pages

Publisher

Data Source

[Book] 細胞工学2015

Author(s)

Total Pages

Publisher

Data Source

[Book] 実験医学2015

Author(s)

Total Pages

Publisher

Data Source

[Journal Article] TRIM28 Expression on Dendritic Cells Prevents Excessive T Cell Priming by Silencing Endogenous Retrovirus2021

Author(s)

Journal Title

DOI

Description

Data Source

[Journal Article] Broad heterochromatic domains open in gonocyte development prior to de novo DNA methylation.2019

Author(s)

Journal Title

DOI

Data Source

[Journal Article] Misprocessed tRNA response targets piRNA clusters2015

Author(s)

Journal Title

DOI

Data Source

[Journal Article] piRNA clusters and open chromatin structure2014

Author(s)

Journal Title

DOI

Yamanaka Soichiro 山中総一郎

YAMANAKA SOICHIRO 山中総一郎